BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0003.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777339.1| branched-chain amino acid ABC transporter pe... 750 0.0 ref|YP_003775040.1| branched-chain amino acid ABC transporter pe... 162 6e-38 ref|YP_001478782.1| extracellular ligand-binding receptor [Serra... 157 2e-36 ref|YP_004500988.1| extracellular ligand-binding receptor [Serra... 155 7e-36 ref|ZP_06190288.1| extracellular ligand-binding receptor [Serrat... 154 2e-35 ref|YP_004828750.1| Extracellular ligand-binding receptor [Enter... 149 7e-34 ref|ZP_02365527.1| amino acid ABC transporter, periplasmic amino... 149 1e-33 ref|ZP_05967743.1| putative amino acid ABC transporter, periplas... 149 1e-33 ref|YP_001454479.1| hypothetical protein CKO_02937 [Citrobacter ... 144 2e-32 ref|YP_004231105.1| extracellular ligand-binding receptor [Burkh... 143 4e-32 >ref|YP_003777339.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ65431.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 385 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/377 (97%), Positives = 372/377 (98%) Query: 1 VLAGVLLLWAFMQAGWAQERKTIALGFTGRLSEPIAQSALQGAQLAIDEANALAAKRRSP 60 VLAGVLLLWAFMQAGWAQERKTIALGFTGRLSEPIAQSALQGAQLAIDEANALAAKRRSP Sbjct: 9 VLAGVLLLWAFMQAGWAQERKTIALGFTGRLSEPIAQSALQGAQLAIDEANALAAKRRSP 68 Query: 61 LRFALLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTA 120 LRF LLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTA Sbjct: 69 LRFELLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTA 128 Query: 121 TSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVEN 180 TSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVEN Sbjct: 129 TSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVEN 188 Query: 181 LGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTA 240 LGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANR+RTTA Sbjct: 189 LGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRTRTTA 248 Query: 241 RLLLTGGASNLSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYD 300 RLLLTGGASNLSLPAPLELRLHVLEYEIARPHCPQWK VTQ YQRRFGAAPTTYSFYAYD Sbjct: 249 RLLLTGGASNLSLPAPLELRLHVLEYEIARPHCPQWKVVTQTYQRRFGAAPTTYSFYAYD 308 Query: 301 AASVLTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQERWQA 360 AASVLTAAI QAGSDNGD+IATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQERWQA Sbjct: 309 AASVLTAAIVQAGSDNGDKIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQERWQA 368 Query: 361 VEFFAPGNANARQEACS 377 VE FAPG+ANARQEACS Sbjct: 369 VEVFAPGSANARQEACS 385 >ref|YP_003775040.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ63132.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 394 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 119/363 (32%), Positives = 172/363 (47%), Gaps = 25/363 (6%) Query: 18 QERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKRRSPLRFA-------LLP 67 QE T+A+GF G LS P + +S G QLA+ EAN R LR L+ Sbjct: 35 QETATLAIGFAGPLSGPSGGVGKSMQNGVQLALAEAN------RRGLRIGGKSWQLRLIA 88 Query: 68 QDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTG 127 QDD + A +AR V+++V V+G W+S +LA A +Y A + Q+ +A S + T Sbjct: 89 QDDRADPATAEFVARSLVQQQVIAVVGHWTSGTSLAAAPVYHRAGVIQVTPSAMSRRLTA 148 Query: 128 MGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQ 187 M FR + L A A L+ R I I + + LA+ Q Sbjct: 149 MSYPRIFRTIPNNESLGRLAAGYAVDKLETRTIVTIDDRTPFGQGLAEQFARTASERGAQ 208 Query: 188 IALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGG 247 + + RY V +++DF+AAL A Q D+I F GL QA R + ARL+ + G Sbjct: 209 V-VGRYSVSDKTSDFNAALLEARKLQPDLIFFGGLDWQAGVLAKSIRRLKLHARLMASPG 267 Query: 248 ASNLSLP-----APLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAA 302 L LP P VLE + P WK+ Q Y F + Y+ +AY+AA Sbjct: 268 --TLGLPFLMRAGPDANGALVLEPGPPQDKMPGWKSFRQRYSENFDSDMDLYAVFAYEAA 325 Query: 303 SVLTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQE-RWQAV 361 + I QAGS + +RIA A+HR+R G+ G ++F+ G P +T+ ++ RWQ V Sbjct: 326 QAIIQGIRQAGSADPERIAEAMHRLRFEGVSGPVAFNEEGDLLQPSFTMYEVKDQRWQPV 385 Query: 362 EFF 364 F Sbjct: 386 ARF 388 >ref|YP_001478782.1| extracellular ligand-binding receptor [Serratia proteamaculans 568] gb|ABV41654.1| Extracellular ligand-binding receptor [Serratia proteamaculans 568] Length = 386 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 115/350 (32%), Positives = 171/350 (48%), Gaps = 9/350 (2%) Query: 18 QERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKRR-SPLRFALLPQDDHGN 73 Q +TI +G G L+ P I + GAQLAI +ANA + P+ F LL +DD + Sbjct: 27 QADETILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLKGKPVTFKLLSEDDQSD 86 Query: 74 ENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTGMGNRMP 133 AV +A+ V E VAGV+G W++ ++ A IY A I Q+ AT +T G Sbjct: 87 PRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHGYTQQGFDTS 146 Query: 134 FRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQIALARY 193 FRV+G + + A + L+ +RI VI A+ + LAD +++L Q +AR Sbjct: 147 FRVMGHDDDGGHYAGDYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGLQ-PVARE 205 Query: 194 QVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGG---ASN 250 V ++ DF A L + AD+I F G+ QA + +L+ GG + Sbjct: 206 YVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAPLARRIKQLGMNTQLMGAGGFVSQTF 265 Query: 251 LSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAASVLTAAIA 310 L+L + LE + P KA QAY+ R+ ++ +AYDA VL AAI Sbjct: 266 LTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVLIAAIE 325 Query: 311 QAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQE-RWQ 359 QAGS + L + + G+ GT++FDA G P +TL R + +WQ Sbjct: 326 QAGSADPADYLPKLRAIHYQGVTGTIAFDAQGNLQQPSFTLYRVVDGKWQ 375 >ref|YP_004500988.1| extracellular ligand-binding receptor [Serratia sp. AS12] ref|YP_004505941.1| extracellular ligand-binding receptor [Serratia sp. AS9] gb|AEF45680.1| Extracellular ligand-binding receptor [Serratia sp. AS9] gb|AEF50631.1| Extracellular ligand-binding receptor [Serratia sp. AS12] gb|AEG28338.1| Extracellular ligand-binding receptor [Serratia sp. AS13] Length = 387 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 114/351 (32%), Positives = 168/351 (47%), Gaps = 9/351 (2%) Query: 17 AQERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKRR-SPLRFALLPQDDHG 72 +Q TI +G G L+ P I + GAQLAI +ANA P+ F LL +DD Sbjct: 26 SQAADTILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLNGKPVTFKLLSEDDQS 85 Query: 73 NENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTGMGNRM 132 + AV +A+ V E VAGV+G W++ ++ A IY A I Q+ AT +T G Sbjct: 86 DPRTAVAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDAGIAQVAPVATGHAYTQQGFDT 145 Query: 133 PFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQIALAR 192 FRV+G + E A + L+ +RI VI A+ + LAD +++L Q +AR Sbjct: 146 SFRVMGHDDDGGNYAGEYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGMQ-PVAR 204 Query: 193 YQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGG---AS 249 V ++ DF A L + AD+I F G+ QA + +L+ GG + Sbjct: 205 EYVDDKTVDFSAVLTTVRSKNADLIFFGGVDSQAAPLARRIKQLGMNTQLMGAGGFVSQT 264 Query: 250 NLSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAASVLTAAI 309 L+L + LE + P KA QAY+ R+ ++ +AYDA VL AAI Sbjct: 265 FLTLAQKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVLIAAI 324 Query: 310 AQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQE-RWQ 359 QAGS N L + + G+ G ++FD G P +TL + + +WQ Sbjct: 325 EQAGSANPADYLPKLRAIHYQGVTGNIAFDPQGNLQQPSFTLYKVVDGKWQ 375 >ref|ZP_06190288.1| extracellular ligand-binding receptor [Serratia odorifera 4Rx13] gb|EFA16984.1| extracellular ligand-binding receptor [Serratia odorifera 4Rx13] Length = 387 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/346 (32%), Positives = 166/346 (47%), Gaps = 9/346 (2%) Query: 22 TIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKRR-SPLRFALLPQDDHGNENFA 77 TI +G G L+ P I + GAQLAI +ANA P+ F LL +DD + A Sbjct: 31 TILIGLAGPLTGPSARIGKDLENGAQLAIADANAQKPTLNGKPVTFKLLSEDDQSDPRTA 90 Query: 78 VNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTGMGNRMPFRVV 137 V +A+ V E VAGV+G W++ ++ A IY A I Q+ AT +T G FRV+ Sbjct: 91 VAVAQRLVDEGVAGVVGHWNTGTSIPAARIYHDASIAQVAPVATGHAYTQQGFDTSFRVM 150 Query: 138 GGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQIALARYQVGR 197 G + E A + L+ +RI VI A+ + LAD +++L Q +AR V Sbjct: 151 GHDDDGGNYAGEYAVKVLKAKRIAVIDDRTAFGQGLADEFIKSLAAQGIQ-PVAREYVDD 209 Query: 198 RSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGG---ASNLSLP 254 ++ DF A L + AD+I F G+ QA + +L+ GG + L+L Sbjct: 210 KTVDFSAVLTTVRSKNADLIFFGGVDSQAAPLARRIKQLGMNTQLMGAGGFVSQTFLTLA 269 Query: 255 APLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAASVLTAAIAQAGS 314 + LE + P KA QAY+ R+ ++ +AYDA VL AAI QAGS Sbjct: 270 QKEGEGVVALEPGLPLEQMPGGKAFEQAYRDRYKTHIELHAPFAYDATRVLIAAIEQAGS 329 Query: 315 DNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQE-RWQ 359 N L + + G+ G ++FD G P +TL + + +WQ Sbjct: 330 ANPADYLPKLRAIHYQGVTGNIAFDPQGNLQQPSFTLYKVVDGKWQ 375 >ref|YP_004828750.1| Extracellular ligand-binding receptor [Enterobacter asburiae LF7a] gb|AEN64965.1| Extracellular ligand-binding receptor [Enterobacter asburiae LF7a] Length = 385 Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 112/372 (30%), Positives = 177/372 (47%), Gaps = 20/372 (5%) Query: 2 LAGVLLLWAFMQAG-WAQERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKR 57 L+ +LL F G WA + +T+ +G G L+ P I + GAQLAID+ N + Sbjct: 9 LSAAILLSGFASTGAWAADSETVVIGLAGPLTGPSARIGKDLENGAQLAIDDIN-----K 63 Query: 58 RSP------LRFALLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESA 111 + P + F L +DD + AV +A+ V VAGV+G W++ ++ A +Y A Sbjct: 64 QHPTIGGKAVTFKLQSEDDQSDPRTAVAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDA 123 Query: 112 QIPQIGFTATSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSR 171 I Q+ AT +T G FRV+G + + A +L+ +RI VI A+ + Sbjct: 124 GIAQVAPVATGHAYTKQGFDTSFRVMGHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQ 183 Query: 172 ALADTLVENLGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFID 231 LAD +++L +I +Y V ++ DF A L A + AD+I F G+ QA Sbjct: 184 GLADEFIKSLEAQGVKIVDRQY-VDDKTVDFSAVLTAIRSKNADLIFFGGVDSQAAPLAR 242 Query: 232 GANRSRTTARLLLTGG---ASNLSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFG 288 + A L+ GG + L L + LE + P KA QAYQ R+ Sbjct: 243 RIKQLGMNATLMGAGGFVSQTFLQLAQKEGEGVVALEPGLPVDQMPGGKAFEQAYQSRYH 302 Query: 289 AAPTTYSFYAYDAASVLTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPR 348 ++ +AYDA VL AA+ +A S + AL + ++G+ G ++FD G P Sbjct: 303 THIELHAPFAYDATRVLVAAMEKANSVDPSEYLPALRAINYSGVTGQIAFDNEGNLKAPS 362 Query: 349 YTLLRYQE-RWQ 359 +T+ + + +WQ Sbjct: 363 FTVYKVVDGKWQ 374 >ref|ZP_02365527.1| amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Burkholderia oklahomensis C6786] Length = 431 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/360 (31%), Positives = 175/360 (48%), Gaps = 15/360 (4%) Query: 21 KTIALGFTGRLSEP---IAQSALQGAQLAIDEAN----ALAAKRRSPLRFALLPQDDHGN 73 +T+ +G L+ P I + GAQLA+D+AN AL K P+ + L+ DD + Sbjct: 50 RTVLIGLAAPLTGPSARIGKDLQNGAQLALDDANSRHPALGGK---PVVYKLVAVDDQSD 106 Query: 74 ENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTGMGNRMP 133 AV +A+ V+ +V GV+G W++ ++ + IY A I QI +T Q+T G Sbjct: 107 PRTAVTVAQQLVERRVIGVVGHWNTGCSVPASRIYRDAGIAQIAPASTGRQYTRQGYATA 166 Query: 134 FRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQIALARY 193 FR+VG A ++L +RI VI A+ LAD V+ + + I + R Sbjct: 167 FRIVGHDDAGGAYAGAYVVKTLHAKRIAVIDDRTAFGAGLADQFVKGVEANGGAI-VDRQ 225 Query: 194 QVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGG---ASN 250 V ++TDF A L A +A +ADV+ F GL QA + + +A L+ GG + Sbjct: 226 YVNDKATDFSAVLTAVKARRADVVFFGGLDAQAAPLARRMRQLKLSATLVGAGGFVTQTF 285 Query: 251 LSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAASVLTAAIA 310 LSL P + LE + P A Y+ R+ A ++ +AYDA + L AA Sbjct: 286 LSLAGPDGDGVTALEPGLPLAGMPGGAAFDARYRARYRAPIELHAPFAYDATATLIAAAE 345 Query: 311 QAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRY-QERWQAVEFFAPGNA 369 +A S + R+ LH ++ G+ G ++FDA G P +T+ R +W AV+ G A Sbjct: 346 RANSTDPARLPAVLHTLKRQGVTGAIAFDAEGNLQDPAFTIYRAGGGKWTAVDVLGGGAA 405 >ref|ZP_05967743.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] gb|EFC56733.1| putative amino acid ABC transporter, periplasmic amino acid-binding protein [Enterobacter cancerogenus ATCC 35316] Length = 385 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 112/372 (30%), Positives = 177/372 (47%), Gaps = 20/372 (5%) Query: 2 LAGVLLLWAFMQAG-WAQERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKR 57 L+ +LL F G WA + +T+ +G G L+ P I + GAQLAID+ N + Sbjct: 9 LSAAILLSGFASTGAWAADSETVVIGLAGPLTGPSARIGKDLENGAQLAIDDIN-----K 63 Query: 58 RSP------LRFALLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESA 111 + P + F L +DD + AV +A+ V VAGV+G W++ ++ A +Y A Sbjct: 64 QHPTIGGKAVTFKLQSEDDQSDPRTAVAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDA 123 Query: 112 QIPQIGFTATSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSR 171 I Q+ AT +T G FRV+G + + A +L+ +RI VI A+ + Sbjct: 124 GIAQVAPVATGHAYTKQGFDTSFRVMGHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQ 183 Query: 172 ALADTLVENLGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFID 231 LAD +++L +I +Y V ++ DF A L A + AD+I F G+ QA Sbjct: 184 GLADEFIKSLDAQGVKIVDRQY-VDDKTVDFSAVLTAIRSKNADLIFFGGVDSQAAPLAR 242 Query: 232 GANRSRTTARLLLTGG---ASNLSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFG 288 + A L+ GG + L L + LE + P KA QAYQ R+ Sbjct: 243 RIKQLGMKATLMGAGGFVSQTFLQLAQKEGEGVVALEPGLPVEQMPGGKAFEQAYQSRYH 302 Query: 289 AAPTTYSFYAYDAASVLTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPR 348 ++ +AYDA VL AA+ +A S + AL + ++G+ G ++FD G P Sbjct: 303 THIELHAPFAYDATRVLVAAMEKADSVDPADYLPALRAISYSGVTGQIAFDKEGNLTSPS 362 Query: 349 YTLLRYQE-RWQ 359 +T+ + + +WQ Sbjct: 363 FTVYKVVDGKWQ 374 >ref|YP_001454479.1| hypothetical protein CKO_02937 [Citrobacter koseri ATCC BAA-895] gb|ABV14043.1| hypothetical protein CKO_02937 [Citrobacter koseri ATCC BAA-895] Length = 385 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 110/372 (29%), Positives = 177/372 (47%), Gaps = 20/372 (5%) Query: 2 LAGVLLLWAFMQAG-WAQERKTIALGFTGRLSEP---IAQSALQGAQLAIDEANALAAKR 57 L+ +LL +F G W+ + +T+A+G G L+ P I + GAQLAID+ N + Sbjct: 9 LSAAILLSSFASTGAWSAKSETVAIGLAGPLTGPSARIGKDLENGAQLAIDDIN-----K 63 Query: 58 RSP------LRFALLPQDDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESA 111 + P + F L +DD + AV +A+ V VAGV+G W++ ++ A +Y A Sbjct: 64 QHPTIGGKAVTFRLQSEDDQSDPRTAVAVAQRLVDSGVAGVVGHWNTGTSIPAARVYHDA 123 Query: 112 QIPQIGFTATSSQWTGMGNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSR 171 I Q+ AT +T G FRV+G + + A +L+ +RI VI A+ + Sbjct: 124 GIAQVAPVATGHAYTRQGFDTSFRVMGHDDDGGQFAGQYAVNTLKAKRIAVIDDRTAFGQ 183 Query: 172 ALADTLVENLGGSAQQIALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFID 231 LAD +++L +I +Y V ++ DF A L A + AD+I F G+ QA Sbjct: 184 GLADEFIKSLEAQGVKIVDRQY-VDDKTVDFSAVLTAIRSKNADLIFFGGVDSQAAPLAR 242 Query: 232 GANRSRTTARLLLTGG---ASNLSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFG 288 + A L+ GG + L L + LE + P KA Q YQ R+ Sbjct: 243 RIKQLGMNATLMGAGGFVSQTFLQLAQKEGEGVVALEPGLPVEQMPGGKAFEQEYQSRYH 302 Query: 289 AAPTTYSFYAYDAASVLTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPR 348 ++ +AYDA VL AA+ +A S + L + ++G+ G ++FD G P Sbjct: 303 THIELHAPFAYDATRVLVAAMEKADSVDPAEYLPVLRAISYSGVTGQIAFDNEGNLKSPS 362 Query: 349 YTLLRYQE-RWQ 359 +T+ + + +WQ Sbjct: 363 FTVYKVVDGKWQ 374 >ref|YP_004231105.1| extracellular ligand-binding receptor [Burkholderia sp. CCGE1001] gb|ADX58045.1| Extracellular ligand-binding receptor [Burkholderia sp. CCGE1001] Length = 385 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/364 (30%), Positives = 174/364 (47%), Gaps = 17/364 (4%) Query: 16 WAQERKTIALGFTGRLSEPIAQ--SALQ-GAQLAIDEANALAAKRRS----PLRFALLPQ 68 +A + + + +GF G L+ P+A+ LQ GAQLAIDE NA KR + P++F L Q Sbjct: 27 FADDPQVVKIGFVGPLTGPVARVGKDLQYGAQLAIDEENA---KRPTVAGKPVKFVLDVQ 83 Query: 69 DDHGNENFAVNIARYYVKEKVAGVIGPWSSDAALATAAIYESAQIPQIGFTATSSQWTGM 128 DD + A+ +A+ V + V GVIG ++S ++ + +Y +A + I +T+ Q T Sbjct: 84 DDQADPRVAIQVAQKLVDDGVVGVIGHYNSGCSIPASTVYHNANVAMITPGSTNPQLTKQ 143 Query: 129 GNRMPFRVVGGTRELAATLAEVATRSLQGRRIFVIQSDAAYSRALADTLVENLGGSAQQI 188 G + FR +G ++ +RI +I A+ + LAD + + + I Sbjct: 144 GYKNVFRTMGHDGVGGVVAGHFVVEQIKAKRIGIIDDRTAFGQGLADAFEKGVKEANGNI 203 Query: 189 ALARYQVGRRSTDFHAALKAAEAHQADVIVFVGLYPQARAFIDGANRSRTTARLLLTGGA 248 + R ++ DF A L + +A DVI F GL Q A + RS A L GA Sbjct: 204 -VDREFTNDKAVDFRAILTSLKAKNVDVIFFGGLDEQG-AMLVKQMRSLGMATQLFGAGA 261 Query: 249 --SN--LSLPAPLELRLHVLEYEIARPHCPQWKAVTQAYQRRFGAAPTTYSFYAYDAASV 304 SN L + P R LE A P + + Y+ RF Y+ +AYDAA Sbjct: 262 LKSNAFLQIAGPSGERTQDLEPGPALDKLPAAQDFGRRYKVRFNQDVELYAPFAYDAALA 321 Query: 305 LTAAIAQAGSDNGDRIATALHRMRHAGLHGTLSFDATGANAHPRYTLLRYQE-RWQAVEF 363 + AI A S + RI +L ++ G+ G ++FD G P YTL Q+ +W++V+ Sbjct: 322 MLKAIHDANSLDRQRIVDSLAKVSIPGVTGKITFDPYGDLIKPPYTLFEVQQGQWKSVKT 381 Query: 364 FAPG 367 G Sbjct: 382 VGGG 385