BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0001.p (448 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07026251.1| hypothetical protein AfiDRAFT_1380 [Afipia sp... 436 e-120 gb|EGP44076.1| hypothetical protein AXXA_23070 [Achromobacter xy... 252 8e-65 ref|YP_004011786.1| hypothetical protein Rvan_1430 [Rhodomicrobi... 248 2e-63 >ref|ZP_07026251.1| hypothetical protein AfiDRAFT_1380 [Afipia sp. 1NLS2] gb|EFI53393.1| hypothetical protein AfiDRAFT_1380 [Afipia sp. 1NLS2] Length = 1328 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 217/416 (52%), Positives = 282/416 (67%), Gaps = 4/416 (0%) Query: 33 GAAAAQAGYDYQLDVSILAALQLLLISNATTRITLEPANEEDLEADMNPHVPGRMQPSAT 92 GA AA GY+YQL VS+LAAL+L+LI+ + +RITLEPANEEDLE+D+ P PGR+QPSA Sbjct: 12 GAKAALDGYEYQLGVSVLAALRLMLITKSASRITLEPANEEDLESDLEPATPGRVQPSAN 71 Query: 93 VSGGHKLVVQVKMDNGEPWSIDDLVALLKHGSDKAGGRRPALHHLDEPNTRYLLVTNADA 152 V+ G+KLVVQVK+ N PWSI D ALLK G+ RRPA HHLD+P TRYLL+TNADA Sbjct: 72 VADGYKLVVQVKLRNSGPWSITDFEALLKRGTT----RRPAKHHLDDPGTRYLLITNADA 127 Query: 153 KGVLRNLLVEGFEEPSDKDSFPASLRDTLEKSPEGRIAIWGKLTSNQLASNIKEMMSDLL 212 GV R+LLV+G EE ++ +FPASL TL PEGRIAIWG LT L I +++ LL Sbjct: 128 SGVARDLLVQGLEEWPEEQTFPASLSGTLPHGPEGRIAIWGVLTERLLDLEINDILGSLL 187 Query: 213 HVPKVNHQSLLERLRAEAKRRAMGSKAGVWIRDDLLTTIQEYGGFLASSASLEQYVKPEN 272 VP+ RLR EA++R G+ GVW R+DLL+ I+ GG+LAS+ LE +V P N Sbjct: 188 RVPQSRQAECRARLRDEARQRMRGTSPGVWTREDLLSIIRGCGGYLASAPQLEAFVPPGN 247 Query: 273 FEEILGVLLEKNAVVIRGPSGTGKTQTAYKLCEIARHRNGHLEQVTIGAEDTPTSIRKAS 332 ++ + +L +NA+VI GPSGTGKT TA L + AR R E + + + P+S+R + Sbjct: 248 YQALSDLLERRNALVITGPSGTGKTWTALALVDQARQRPSAPEIIQVNVNNGPSSMRTLT 307 Query: 333 GNGPTLFNIDDPWGQFSLSGGSEAWTEQLPRLLSRASPDQQFVITTRSDMMQIANVGESF 392 GP LF ++DPWGQ+SL GG++ WTEQLPRLL A Q+VIT+R+DM+ A E Sbjct: 308 DTGPKLFYVEDPWGQYSLRGGTDVWTEQLPRLLREAHAGHQYVITSRTDMLGQAKADEGL 367 Query: 393 ASWCVELNPEQYKDGQLGEIYDMRMNRLPPLLRTTSFKHRTQVLEKLETPLEIELI 448 W V L+ +QY+DG+L +IYD R+ L L+ + RT LE LETP EI+L Sbjct: 368 KRWTVVLDADQYRDGELADIYDKRLELLATELQAKALDFRTDALEALETPFEIDLF 423 >gb|EGP44076.1| hypothetical protein AXXA_23070 [Achromobacter xylosoxidans AXX-A] Length = 1322 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 150/407 (36%), Positives = 221/407 (54%), Gaps = 7/407 (1%) Query: 40 GYDYQLDVSILAALQLLLISNATTRITLEPANEEDLEADMNPHVPGRMQPSATVSGGHKL 99 GY+YQ+DVS+ AL L+L S+ + LEPA EED+EAD+ PGR+ +A V ++L Sbjct: 23 GYEYQIDVSVWLALDLVLSSDFANEVVLEPATEEDIEADLADFEPGRVVTTAKVEQ-YRL 81 Query: 100 VVQVKMDNGEPWSIDDLVALLKHGSDKAGGRRPALHHLDEPNTRYLLVTNADAKGVLRNL 159 +VQ K +G+ WS+ + LL+HG+D R A L P RYLLVT+A G R L Sbjct: 82 IVQAKFRSGDAWSVAGVKGLLEHGTD----RPSAASRLANPQNRYLLVTSAGVNGGARGL 137 Query: 160 LVEGFEEPSDKDSFPASLRDTLEKSPEGRIAIWGKLTSNQLASNIKEMMSDLLHVPKVNH 219 V AS++ L GR+AI G +L +IK ++S+ L VP + Sbjct: 138 QVRNAGLWPKVADMAASIKAALPAGSAGRVAILGNQDFERLERDIKAVLSETLRVPNMRL 197 Query: 220 QSLLERLRAEAKRRAMGSKAGVWIRDDLLTTIQEYGGFLASSASLEQYVKPENFEEILGV 279 ++ +LR EA+ R G+ G W R +L I+ + G++ASS LE YVKP N+EEI Sbjct: 198 EACRRKLRDEARVRMGGAGGGRWTRAELEEVIRAHDGYIASSPELEHYVKPTNWEEIKSA 257 Query: 280 LLEKNAVVIRGPSGTGKTQTAYKLCEIARHRNGHLEQVTIGAEDTPTSIRKASGNGPTLF 339 +L +NA +I G SGTGKT KL + R L +V I + P IR P L+ Sbjct: 258 MLVRNAALIIGQSGTGKTMATLKLYDELRKEIPGLTRVPI--KYGPDQIRADKTPPPVLY 315 Query: 340 NIDDPWGQFSLSGGSEAWTEQLPRLLSRASPDQQFVITTRSDMMQIANVGESFASWCVEL 399 +I+DPWG++ S W +QL + + A PD+ + T+R D+ + + + W V L Sbjct: 316 DIEDPWGRYDFDPRSRPWNDQLAQHFAHARPDRLVIATSRLDVARSSGALNTVKRWEVSL 375 Query: 400 NPEQYKDGQLGEIYDMRMNRLPPLLRTTSFKHRTQVLEKLETPLEIE 446 E Y + +Y R+N LP ++ + + ++ VL KL TPLEI+ Sbjct: 376 EAEHYGVRERQRLYQTRINDLPRNVQILAKESQSDVLAKLATPLEIQ 422 >ref|YP_004011786.1| hypothetical protein Rvan_1430 [Rhodomicrobium vannielii ATCC 17100] gb|ADP70687.1| hypothetical protein Rvan_1430 [Rhodomicrobium vannielii ATCC 17100] Length = 1321 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 148/409 (36%), Positives = 228/409 (55%), Gaps = 11/409 (2%) Query: 40 GYDYQLDVSILAALQLLLISNATTRITLEPANEEDLEADMNPHVPGRMQPSATVSGGHKL 99 G+ YQ++VS+ AAL LLL A + LEP ++EDLEAD++ G M A ++L Sbjct: 20 GFWYQVNVSVWAALDLLLAKKAANEVILEPTSQEDLEADLDDTEQGPMAARANYES-YRL 78 Query: 100 VVQVKMDNGEPWSIDDLVALLKHGSDKAGGRRPALHHL-DEPNTRYLLVTNADAKGVLRN 158 ++Q K+ + + W++ L +LL HGS+ R PA L D+P+T+Y+LVT+A G R Sbjct: 79 IIQAKLRSTDTWNVQGLKSLLTHGSE----RLPAASRLKDDPSTKYVLVTSAALSGKARK 134 Query: 159 LLVEGFEEPSDKDSFPASLRDTLEKSPEGRIAIW-GKLTSNQLASNIKEMMSDLLHVPKV 217 L V+ F P+SLR + + GR+A+ G+ ++ ++E++ D VP Sbjct: 135 LGVQVFGAWPPPADLPSSLRSAVPDAA-GRLAVLAGEDLEFKIPRRLRELLEDSFKVPHS 193 Query: 218 NHQSLLERLRAEAKRRAMGSKAGVWIRDDLLTTIQEYGGFLASSASLEQYVKPENFEEIL 277 ++ + L+ EA RR G G+W R DL TI+ + G +ASSA E +VKP N+ + Sbjct: 194 RYEDCVRALQHEALRRMRGDFNGIWARTDLELTIKAHDGMIASSAEAESFVKPTNWAQFK 253 Query: 278 GVLLEKNAVVIRGPSGTGKTQTAYKLCEIARHRNGHLEQVTIGAEDTPTSIRKASGNGPT 337 L E++A++I G SGTGKT A L R L + + P +R A NGP Sbjct: 254 QQLEERHAIIIVGHSGTGKTTAAEVLMSELREAIPGLSVIRV--TQGPAQVRNAP-NGPV 310 Query: 338 LFNIDDPWGQFSLSGGSEAWTEQLPRLLSRASPDQQFVITTRSDMMQIANVGESFASWCV 397 +F I+DPWG++ SE W ++LP L + P++ F+IT+RSD++ A+ + W Sbjct: 311 VFMIEDPWGRYRFEPSSEPWNDELPEFLKTSKPNRLFIITSRSDVLGEAHTRKLLNRWFA 370 Query: 398 ELNPEQYKDGQLGEIYDMRMNRLPPLLRTTSFKHRTQVLEKLETPLEIE 446 EL E Y Q +++D R+ LPP L+ + + R VL +L TPLEI+ Sbjct: 371 ELESEHYGLRQRHQLFDNRVRALPPQLQRLAVQSRDHVLGELATPLEIQ 419