BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0166.p (447 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_366383.1| hypothetical protein Bcep18194_C6689 [Burkholde... 489 e-136 ref|YP_002908437.1| efflux ABC transporter permease [Burkholderi... 479 e-133 ref|YP_002912114.1| efflux ABC transporter permease [Burkholderi... 456 e-126 ref|ZP_02372085.1| ABC transporter, permease protein, putative [... 424 e-116 ref|ZP_02495532.1| putative permease [Burkholderia pseudomallei ... 422 e-116 ref|YP_440531.1| ABC transporter permease [Burkholderia thailand... 421 e-115 ref|ZP_02467654.1| efflux ABC transporter, permease protein [Bur... 419 e-115 ref|YP_001077172.1| efflux ABC transporter permease [Burkholderi... 418 e-114 ref|ZP_04889023.1| efflux ABC transporter, permease protein [Bur... 417 e-114 ref|YP_112326.1| permease [Burkholderia pseudomallei K96243] >gi... 416 e-114 >ref|YP_366383.1| hypothetical protein Bcep18194_C6689 [Burkholderia sp. 383] gb|ABB05739.1| protein of unknown function DUF214 [Burkholderia sp. 383] Length = 465 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 265/470 (56%), Positives = 338/470 (71%), Gaps = 28/470 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M +AFRNLLRNRRRS TLLAMVVG++A+LLFGGYA ++NY LQT++VR GHLQIQ Sbjct: 1 MSLWVLAFRNLLRNRRRSSTTLLAMVVGLAAILLFGGYARDINYGLQTSYVRQGGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 ++YFLYG+GDP+++ I Y+ +IDTV D L+ VTVVTP+LA++GIAGN+ AGVS T Sbjct: 61 HRDYFLYGSGDPVSYGIADYRKIIDTVLGDPELAREVTVVTPVLAINGIAGNFAAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V G G+VVADQNRMRQWNDYGF+ + PL+LT ++A++ VIGTG+ R+L LC L +P+C Sbjct: 121 VSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAAVIGTGVARVLHLCDALRVPDC 180 Query: 181 ALNGVRKTENAATSA------DIAQLRSA--------RGGESRX--------GAPNVAQL 218 R AA + DIA L A R G +R GAPNVA+L Sbjct: 181 -----RDPVTAAPAGASDLPDDIASLSQAEAAAKPVHRSGLARLELLTSNAYGAPNVAEL 235 Query: 219 AVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEP-GKATAIAVQLHHTSDQSAAIQRIRQ 277 +V+ A+ QGV+ VDD ++Q+HL QAQ+L+YGS P K T+I VQL HT+D AA RI+ Sbjct: 236 SVIAAQKQGVKQVDDLFVQVHLPQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQT 295 Query: 278 LEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSMAVMER 337 L T L + L+VL F TL PQY Q+TGMF AIFGF+A+LI IV+F VGNTM+MAVMER Sbjct: 296 LLRTRLAGEPLEVLGFATLNPQYGQVTGMFGAIFGFIAVLIATIVLFTVGNTMNMAVMER 355 Query: 338 TIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWTPPGEI 397 T EIGTLRA+G+R G+ R+F+ EG LLG+ GA+ G + ALAA IN AG HWTPPG+ Sbjct: 356 THEIGTLRALGLRGAGIRRLFVCEGCLLGLCGAVAGTVLALAAGVAINRAGLHWTPPGQT 415 Query: 398 DPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 DPV +VRV+GE MI YA+G+ ++TLSA+ PA RAAR+PIV AL +A Sbjct: 416 DPVALSVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVDALRFA 465 >ref|YP_002908437.1| efflux ABC transporter permease [Burkholderia glumae BGR1] gb|ACR31202.1| Efflux ABC transporter permease [Burkholderia glumae BGR1] Length = 465 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 268/470 (57%), Positives = 338/470 (71%), Gaps = 28/470 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M +AFRNLLRNRRRS TLLAM+VG++A+LLFGGYA N+NY LQT++VR GHLQIQ Sbjct: 1 MSVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 ++YFLYG+GDP+++ ID Y+ V+DTVR D L+ VTVVTP+L V+GIAGN+ AGVS T Sbjct: 61 HRDYFLYGSGDPVSYGIDDYRKVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V G G+VVADQNRMRQWNDYGF+ + PL+LT ++A++VVIGTG+ R+LRLC L +P C Sbjct: 121 VSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVVIGTGVARVLRLCDALRVPAC 180 Query: 181 ALNGVRKTENAATS------ADIAQLRSAR--------GGESRX--------GAPNVAQL 218 R AA + ADIA L A GG +R GAPNVA L Sbjct: 181 -----RDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADL 235 Query: 219 AVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEP-GKATAIAVQLHHTSDQSAAIQRIRQ 277 +V+ A+ QGV+ +DD ++Q+ L QAQ+L+YGS P K T+I VQL HT+D AA RI+ Sbjct: 236 SVIAAQKQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQT 295 Query: 278 LEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSMAVMER 337 L T L + L+VL F TL PQY Q+TGMF AIFGF+A+LI IV+F VGNTM+MAVMER Sbjct: 296 LLRTRLAGEPLEVLGFATLNPQYGQVTGMFGAIFGFIAILIATIVLFTVGNTMNMAVMER 355 Query: 338 TIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWTPPGEI 397 T EIGTLRA+G+R G+ R+F+ EG LLG+ GA G + ALAA IN AG HWTPPG+ Sbjct: 356 THEIGTLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGVAINRAGLHWTPPGQT 415 Query: 398 DPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 DPV +VRV+GE MI YA+G+ ++TLSA+ PA RAAR+PIV AL +A Sbjct: 416 DPVALSVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA 465 >ref|YP_002912114.1| efflux ABC transporter permease [Burkholderia glumae BGR1] gb|ACR29410.1| Efflux ABC transporter permease [Burkholderia glumae BGR1] Length = 463 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 249/468 (53%), Positives = 314/468 (67%), Gaps = 26/468 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 MKTLS+A RNLLRNRRRS+ TLLAM+VG AVLLFGGY N+ Y LQT++V+ GHLQI+ Sbjct: 1 MKTLSLALRNLLRNRRRSITTLLAMIVGAHAVLLFGGYTRNITYGLQTDYVKYGGHLQIE 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 RK ++ +G+G+P + I YQ +ID V++D VL+ ++ V TP L + GIAGN+ AG+S T Sbjct: 61 RKGFYEFGSGNPSEYGIGNYQTIIDAVKADPVLAPMLLVATPTLQLQGIAGNFDAGLSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 + +GV VADQNRMR+WNDY F + P++LT T+ D+ VIGTGL R+L LC PL + +C Sbjct: 121 ALALGVRVADQNRMREWNDYRFPVTIPPMALTGTAQDAAVIGTGLARVLELCAPLQVADC 180 Query: 181 -------------AL--------NGVRKTENAATSADIAQLRSARGGESRXGAPNVAQLA 219 AL NG+R A + +L +A + GAPNVA+L Sbjct: 181 QPPKRAAGPADAPALPGDIAALANGMRAASPAGANGSRIELLAA----TARGAPNVAELR 236 Query: 220 VVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSAAIQRIRQLE 279 VKAE QG++ DD Y+ LHL QAQ+L+YG+EP KATAI VQL HTSD AA R+ L Sbjct: 237 AVKAERQGIKEYDDMYVGLHLAQAQRLVYGNEPPKATAIVVQLRHTSDLPAAKARLDTLL 296 Query: 280 ATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSMAVMERTI 339 T D +V+D+ L P Y Q MF +FGFVALLI IV+F VGNTMS AV ERT+ Sbjct: 297 RTRFGDTDTEVVDYTVLNPFYGQALAMFTTLFGFVALLIAAIVLFTVGNTMSTAVFERTV 356 Query: 340 EIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWTPPGEIDP 399 EIGTLRA+G+RR GV R+FL EG LLGV+GAL+G A A INH G WTPPG P Sbjct: 357 EIGTLRAMGLRRGGVRRLFLCEGMLLGVIGALLGVTSAALLAGAINHGGLTWTPPGR-SP 415 Query: 400 VQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 V +RV+GE +IV A+G++ +S LSA PARRAARM IV AL YA Sbjct: 416 VPLIIRVWGENDLIVCTALGLLVVSMLSALLPARRAARMEIVDALRYA 463 >ref|ZP_02372085.1| ABC transporter, permease protein, putative [Burkholderia thailandensis TXDOH] Length = 477 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 231/477 (48%), Positives = 306/477 (64%), Gaps = 30/477 (6%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAM+VG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMIVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y+ +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYERLIARLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G V +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LCGPL +P+C Sbjct: 121 VLAQGAVADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCGPLHVPDC 180 Query: 181 ALNGVRK--TENAATSADIAQL------------RSARGGE----------------SRX 210 A + K +AA++ D + RG E + Sbjct: 181 ADGDIAKDAVASAASATDAPADVLALAAAEADARKGERGDEHGGGRAGATHIEVLAANAY 240 Query: 211 GAPNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSA 270 GAPNV V KAE QGV+ DD YL +HL +AQ+L+YG + + TAI +QL HT+ A Sbjct: 241 GAPNVGGFTVAKAEQQGVKEFDDVYLAMHLSRAQRLVYGGDAPRVTAIEIQLKHTAQLPA 300 Query: 271 AIQRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTM 330 A RI +L LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NTM Sbjct: 301 ARARIGELFGGGFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTM 360 Query: 331 SMAVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFH 390 S A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+ +NH+G Sbjct: 361 STAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFAVNHSGLA 420 Query: 391 WTPPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 WTPP ID V TVRV+GE ++I G+ ++ LSA+ PAR AAR+ IV AL YA Sbjct: 421 WTPPARIDSVALTVRVWGEWRLIALTFAGLAFVAGLSAWLPARHAARLSIVDALRYA 477 >ref|ZP_02495532.1| putative permease [Burkholderia pseudomallei NCTC 13177] ref|ZP_02503767.1| putative permease [Burkholderia pseudomallei 112] ref|ZP_04893498.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] ref|ZP_04964086.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 406e] gb|EDO83620.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 406e] gb|EDO90336.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei Pasteur 52237] Length = 472 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 228/472 (48%), Positives = 303/472 (64%), Gaps = 25/472 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAMVVG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G + +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LC PL +P+C Sbjct: 121 VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC 180 Query: 181 ALNGVRK--TENAATSADIAQL---------------RSARGGESR--------XGAPNV 215 V + AA+ AD R R G + GAPNV Sbjct: 181 GDGDVARQAAPQAASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGAPNV 240 Query: 216 AQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSAAIQRI 275 V KAE QGV+ +DD YL +HL +AQ+L+YG + + TAI +QL HT+ AA R+ Sbjct: 241 GGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAARARL 300 Query: 276 RQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSMAVM 335 +L LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NTMS A++ Sbjct: 301 DRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMSTAIL 360 Query: 336 ERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWTPPG 395 ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+++NH+G WTPP Sbjct: 361 ERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWTPPA 420 Query: 396 EIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 ID V TVRV+GE ++I +G+ ++ SA+ PAR AAR+ IV AL YA Sbjct: 421 RIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA 472 >ref|YP_440531.1| ABC transporter permease [Burkholderia thailandensis E264] ref|ZP_02385961.1| ABC transporter, permease protein, putative [Burkholderia thailandensis Bt4] ref|ZP_05589454.1| ABC transporter, permease protein, putative [Burkholderia thailandensis E264] gb|ABC35230.1| ABC transporter, permease protein, putative [Burkholderia thailandensis E264] Length = 477 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/479 (47%), Positives = 301/479 (62%), Gaps = 34/479 (7%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAM+VG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMIVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y+ +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYERLIARLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G V +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LCGPL +P+C Sbjct: 121 VLAQGAVADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCGPLHVPDC 180 Query: 181 A--------------------------------LNGVRKTENAATSADIAQLRSARGGES 208 A G R E+ A + + Sbjct: 181 ADGDIAKDAVASAASAADAPADVLALAAAEADARKGERGDEHGGERAGATHIEVL--AAN 238 Query: 209 RXGAPNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQ 268 GAPNV V KAE QGV+ DD YL +HL +AQ+L+YG + + TAI +QL HT+ Sbjct: 239 AYGAPNVGGFTVAKAEQQGVKEFDDVYLAMHLSRAQRLVYGGDAPRVTAIEIQLKHTAQL 298 Query: 269 SAAIQRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGN 328 AA RI +L + LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V N Sbjct: 299 PAARARIGELFGGSFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSN 358 Query: 329 TMSMAVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAG 388 TMS A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+ +NH+G Sbjct: 359 TMSAAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFAVNHSG 418 Query: 389 FHWTPPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 WTPP ID V TVRV+GE ++I G+ ++ LSA+ PAR AAR+ IV AL YA Sbjct: 419 LAWTPPARIDSVALTVRVWGEWRLIALTFAGLAFVAGLSAWLPARHAARLSIVDALRYA 477 >ref|ZP_02467654.1| efflux ABC transporter, permease protein [Burkholderia thailandensis MSMB43] Length = 478 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 230/478 (48%), Positives = 302/478 (63%), Gaps = 31/478 (6%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAM+VG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMIVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R YF YG+G+P+A+ I Y +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYFQYGSGNPVAYGIGGYARLIARLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G + +QNRM+QWNDYGF KP L T+ D+ ++G G+ R+L LC PL +P+C Sbjct: 121 VLAQGAIADEQNRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC 180 Query: 181 ALNGVRKTENAATSA-----------DIAQL-------RSARGGESRX------------ 210 + K A+ A D+ L R + + R Sbjct: 181 GDGDIAKEAATASDAAPGAQAADAPDDVLALAAAEAGARKSEQKDERASATHIEVLAANA 240 Query: 211 -GAPNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQS 269 GAPNV V KAE QGV+ +DD YL +HL +AQ+L+YG + + TAI +QL HT+ Sbjct: 241 YGAPNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLP 300 Query: 270 AAIQRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNT 329 AA RI L LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NT Sbjct: 301 AARARIDALFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNT 360 Query: 330 MSMAVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGF 389 MS A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV GA IG L ALA A+ +NH+G Sbjct: 361 MSTAILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVAGASIGVLVALALAFAVNHSGL 420 Query: 390 HWTPPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 WTPP ID V TVRV+GE ++I +G+ ++ LSA+ PAR AAR+ IV AL YA Sbjct: 421 AWTPPARIDSVALTVRVWGEWRLIALTFVGLAFVAGLSAWLPARHAARLSIVDALRYA 478 >ref|YP_001077172.1| efflux ABC transporter permease [Burkholderia pseudomallei 1106a] ref|ZP_04810557.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1106b] gb|ABN93283.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1106a] gb|EES21182.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1106b] Length = 475 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/475 (47%), Positives = 302/475 (63%), Gaps = 28/475 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAMVVG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G + +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LCGPL +P+C Sbjct: 121 VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCGPLRVPDC 180 Query: 181 ALNGVRKTENAATSADIAQL--------------------RSARGGESR--------XGA 212 V + ++ + R R G + GA Sbjct: 181 GDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA 240 Query: 213 PNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSAAI 272 PNV V KAE QGV+ +DD YL +HL +AQ+L+YG + + TAI +QL HT+ AA Sbjct: 241 PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAAR 300 Query: 273 QRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSM 332 R+ +L LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NTMS Sbjct: 301 ARLDRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMST 360 Query: 333 AVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWT 392 A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+++NH+G WT Sbjct: 361 AILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWT 420 Query: 393 PPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 PP ID V TVRV+GE ++I +G+ ++ SA+ PAR AAR+ IV AL YA Sbjct: 421 PPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA 475 >ref|ZP_04889023.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1655] gb|EDU10007.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1655] Length = 475 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/475 (47%), Positives = 301/475 (63%), Gaps = 28/475 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAMVVG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G + +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LC PL +P+C Sbjct: 121 VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC 180 Query: 181 ALNGVRKTENAATSADIAQL--------------------RSARGGESR--------XGA 212 V + ++ + R R G + GA Sbjct: 181 GDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA 240 Query: 213 PNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSAAI 272 PNV V KAE QGV+ +DD YL +HL +AQ+L+YG + + TAI +QL HT+ AA Sbjct: 241 PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAAR 300 Query: 273 QRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSM 332 R+ QL LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NTMS Sbjct: 301 ARLDQLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMST 360 Query: 333 AVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWT 392 A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+++NH+G WT Sbjct: 361 AILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWT 420 Query: 393 PPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 PP ID V TVRV+GE ++I +G+ ++ SA+ PAR AAR+ IV AL YA Sbjct: 421 PPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA 475 >ref|YP_112326.1| permease [Burkholderia pseudomallei K96243] ref|ZP_02476887.1| permease [Burkholderia pseudomallei B7210] ref|ZP_03455725.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 576] ref|ZP_04898886.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei S13] ref|ZP_04953386.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1710a] emb|CAH39810.1| putative permease [Burkholderia pseudomallei K96243] gb|EDS81898.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei S13] gb|EEC32714.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 576] gb|EET02908.1| efflux ABC transporter, permease protein [Burkholderia pseudomallei 1710a] Length = 475 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 224/475 (47%), Positives = 301/475 (63%), Gaps = 28/475 (5%) Query: 1 MKTLSIAFRNLLRNRRRSLRTLLAMVVGMSAVLLFGGYANNVNYVLQTNFVRSEGHLQIQ 60 M T +A RNL RNRRRS+ TLLAMVVG+ AVLLFGG++ ++ + LQT+FVR GHLQIQ Sbjct: 1 MHTFMLALRNLQRNRRRSITTLLAMVVGVCAVLLFGGFSKDITFGLQTDFVRRSGHLQIQ 60 Query: 61 RKNYFLYGAGDPMAFSIDRYQHVIDTVRSDSVLSSLVTVVTPLLAVSGIAGNYGAGVSST 120 R Y+ YG+G+P+A+ I Y +I +R D VL+ ++ V+TP L GIAGN+ AGVS T Sbjct: 61 RHGYYQYGSGNPVAYGIGGYARLIAQLRDDPVLAPMIAVITPTLQFGGIAGNFEAGVSRT 120 Query: 121 VIGIGVVVADQNRMRQWNDYGFSKQMKPLSLTSTSADSVVIGTGLGRILRLCGPLSIPNC 180 V+ G + +Q+RM+QWNDYGF KP L T+ D+ ++G G+ R+L LC PL +P+C Sbjct: 121 VLAQGAIADEQDRMQQWNDYGFPLTPKPYPLVGTAPDAAIVGNGVARVLHLCAPLRVPDC 180 Query: 181 ALNGVRKTENAATSADIAQL--------------------RSARGGESR--------XGA 212 V + ++ + R R G + GA Sbjct: 181 GDGDVARQAAPQAASGASGADAPADVLALAAAEAHAQESGRGERAGAAHIEVLAANAYGA 240 Query: 213 PNVAQLAVVKAESQGVRAVDDRYLQLHLGQAQKLIYGSEPGKATAIAVQLHHTSDQSAAI 272 PNV V KAE QGV+ +DD YL +HL +AQ+L+YG + + TAI +QL HT+ AA Sbjct: 241 PNVGGFTVAKAEQQGVKELDDVYLAMHLPRAQRLVYGGDAPRVTAIEIQLRHTAQLPAAR 300 Query: 273 QRIRQLEATTLRQDDLDVLDFQTLTPQYQQITGMFNAIFGFVALLIGVIVMFMVGNTMSM 332 R+ +L LDVLDF L P Y Q MF+ IFGFV +LIG IV+F+V NTMS Sbjct: 301 ARLDRLFGGRFEGQPLDVLDFAALNPFYDQTNRMFSMIFGFVFVLIGAIVLFVVSNTMST 360 Query: 333 AVMERTIEIGTLRAIGVRRFGVLRIFLLEGALLGVLGALIGALCALAAAWMINHAGFHWT 392 A++ERT+EIGTLR++GVRR G+ +F+ EGALLGV+GA IG L ALA A+++NH+G WT Sbjct: 361 AILERTVEIGTLRSMGVRRGGIQALFVCEGALLGVVGASIGVLVALALAFVVNHSGLAWT 420 Query: 393 PPGEIDPVQFTVRVFGETKMIVGYAIGIVAISTLSAFWPARRAARMPIVSALSYA 447 PP ID V TVRV+GE ++I +G+ ++ SA+ PAR AAR+ IV AL YA Sbjct: 421 PPARIDSVALTVRVWGEWRLIALTFVGLAFVAGFSAWLPARHAARLSIVDALRYA 475