BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0156.p (586 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAE52324.1| putative carbamoyl transferase [Xanthomonas albi... 756 0.0 ref|YP_003376008.1| carbamoyltransferase;albicidin synthetase [X... 753 0.0 gb|ADD82947.1| BatF [Pseudomonas fluorescens] 553 e-155 ref|ZP_02381199.1| Carbamoyltransferase [Burkholderia ubonensis Bu] 518 e-145 ref|YP_777809.1| carbamoyltransferase [Burkholderia ambifaria AM... 503 e-140 ref|ZP_08484417.1| Carbamoyltransferase [Methylomicrobium album ... 501 e-139 emb|CBJ40402.1| putative carbamoyltransferase protein of the Nod... 468 e-129 ref|NP_522349.1| putative transferase protein [Ralstonia solanac... 466 e-129 ref|YP_003749691.1| carbamoyltransferase protein of the nodu fam... 464 e-128 ref|ZP_07746608.1| Carbamoyltransferase [Mucilaginibacter paludi... 463 e-128 >emb|CAE52324.1| putative carbamoyl transferase [Xanthomonas albilineans] Length = 584 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/587 (61%), Positives = 446/587 (75%), Gaps = 4/587 (0%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MKR Y+GLANSFHDS+IAIV + G+V FAEATERYLQ+KR+IG+A D+F R KL+ Y Sbjct: 1 MKRTYIGLANSFHDSAIAIVGDDGQVRFAEATERYLQYKRSIGVAPDVFQRAIKLVHEYG 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 DP +E+++ATSWS +T +M+ L + A Y A G +P +++Q Q F+ RSQL Sbjct: 61 DPGAELVVATSWSGQTPELMREGLGKTAQAVDQYRSAFGDLPWHVNKQFVAQSFFYRSQL 120 Query: 121 SMLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGER 180 +M+EHP LLEY+LS P YR YEHHLTHA +GC++SPF+ A+CAVLDG GE+ Sbjct: 121 AMVEHPGHLLEYDLSHMAEPAFKPPSYRHYEHHLTHAVAGCYTSPFEEAVCAVLDGMGEK 180 Query: 181 SSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAYGQHD 240 ++ AC+HY+ G+L PI E W+SLG FY ++CE CGF LSGEEWKVMGLAAYGQHD Sbjct: 181 NALACYHYQQGKLTPIHQSETSSWASLGFFYGMICEVCGFGTLSGEEWKVMGLAAYGQHD 240 Query: 241 EALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQRVFCE 300 LY +LR+M+ VDG + F A+ QLQ L+AMRR KGQ +E ANLAYAGQ+VFC+ Sbjct: 241 RQLYELLRQMLRVDGLTLRFAPAAQFSQLQRTLYAMRRCKGQPTIELANLAYAGQQVFCD 300 Query: 301 VLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNAVGAAL 360 VLF FL NLHA GLSD+LV GGCALNSSANG++LA TPFR LHVF+APGDDGNAVGAAL Sbjct: 301 VLFEFLHNLHALGLSDHLVLGGGCALNSSANGRVLAETPFRHLHVFAAPGDDGNAVGAAL 360 Query: 361 LAHRDDHPE-TPNRKEPLSPYLGSCMSEETLNHFVKFSGVGKLTHCGNDAPKRAAALLAD 419 AH +DHPE TP SPYLGS MS ETL++ +F + K T C +DA +RAA LL + Sbjct: 361 WAHAEDHPEQTPPAAREQSPYLGSSMSAETLHNVERFGALSKFTRCLDDAAQRAARLLTE 420 Query: 420 NRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPSILDEF 479 +++ W+QG AEFGPRALGNRSILADPRSP IK+ N + + R+ + PFAPSIL E Sbjct: 421 GKIVAWVQGRAEFGPRALGNRSILADPRSPAIKDIIN--ARVKFREEFR-PFAPSILHEH 477 Query: 480 GSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALVSEFHR 539 G+++F Y SPYMERTL+FR A +VPGVVH DGTGR+QT++Q WNPR+HAL+ EF+R Sbjct: 478 GAEYFELYQESPYMERTLKFRAEATRKVPGVVHHDGTGRLQTVKQHWNPRYHALIKEFYR 537 Query: 540 LTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 LT IPLVLNTSFNVMGKPIAHSVEDAL++FFTSGLDAMFI ++LIEK Sbjct: 538 LTGIPLVLNTSFNVMGKPIAHSVEDALSIFFTSGLDAMFIDDVLIEK 584 >ref|YP_003376008.1| carbamoyltransferase;albicidin synthetase [Xanthomonas albilineans GPE PC73] emb|CBA16018.1| putative carbamoyltransferase;albicidin synthetase protein [Xanthomonas albilineans] Length = 584 Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/587 (61%), Positives = 444/587 (75%), Gaps = 4/587 (0%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MK Y+GLANSFHDS+IAIV + G+V FAEATERYLQ+KR+IG+A D+F R KL+ Y Sbjct: 1 MKHTYIGLANSFHDSAIAIVGDDGQVRFAEATERYLQYKRSIGVAPDVFQRAIKLVHEYG 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 DP +E+++ATSWS +T +M+ L + A Y A G +P +++Q Q F+ RSQL Sbjct: 61 DPGAELVVATSWSGQTPELMREGLGKTAQAVDQYRSAFGDLPWHVNKQFVAQSFFYRSQL 120 Query: 121 SMLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGER 180 +M+EHP LLEY+LS P YR YEHHLTHA +GC++SPF+ A+CAVLDG GE+ Sbjct: 121 AMVEHPGHLLEYDLSHMAEPAFKPPSYRHYEHHLTHAVAGCYTSPFEEAVCAVLDGMGEK 180 Query: 181 SSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAYGQHD 240 ++ AC+HY+ G+L PI E W+SLG FY ++CE CGF LSGEEWKVMGLAAYG HD Sbjct: 181 NALACYHYQQGKLTPIHQSETSSWASLGFFYGMICEVCGFGTLSGEEWKVMGLAAYGHHD 240 Query: 241 EALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQRVFCE 300 LY +LR+M+ VDG + F A+ QLQ L+AMRRRKGQ +E ANLAYAGQ+VFC+ Sbjct: 241 RQLYELLRQMLRVDGLTLRFAPAAQFSQLQRTLYAMRRRKGQPAIELANLAYAGQQVFCD 300 Query: 301 VLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNAVGAAL 360 VLF FL NLHA GLSD+LV GGCALNSSANG++LA TPFR LHVF+APGDDGNAVGAAL Sbjct: 301 VLFEFLHNLHALGLSDHLVLGGGCALNSSANGRVLAETPFRHLHVFAAPGDDGNAVGAAL 360 Query: 361 LAHRDDHPE-TPNRKEPLSPYLGSCMSEETLNHFVKFSGVGKLTHCGNDAPKRAAALLAD 419 AH +DHPE TP SPYLGS MS ETL++ +F + K T C +DA +RAA LL + Sbjct: 361 WAHAEDHPEQTPPAAREQSPYLGSSMSAETLHNVERFGALSKFTRCLDDAAQRAARLLTE 420 Query: 420 NRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPSILDEF 479 +++ W+QG AEFGPRALGNRSILADPRSP IK+ N + + R+ + PFAPSIL E Sbjct: 421 GKIVAWVQGRAEFGPRALGNRSILADPRSPAIKDIIN--ARVKFREEFR-PFAPSILHEH 477 Query: 480 GSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALVSEFHR 539 G+++F Y SPYMERTL+FR A +VPGVVH DGTGR+QT++Q WNPR+HAL+ EF+ Sbjct: 478 GAEYFELYQESPYMERTLKFRAEATRKVPGVVHHDGTGRLQTVKQHWNPRYHALIKEFYS 537 Query: 540 LTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 LT IPLVLNTSFNVMGKPIAHSVEDAL++FFTSGLDAMFI ++LIEK Sbjct: 538 LTSIPLVLNTSFNVMGKPIAHSVEDALSIFFTSGLDAMFIDDVLIEK 584 >gb|ADD82947.1| BatF [Pseudomonas fluorescens] Length = 582 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 280/590 (47%), Positives = 393/590 (66%), Gaps = 14/590 (2%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MKRNY+GLA + HD+++A+V+ RGE+VFAEATER+LQ+KR+ D + K+I YC Sbjct: 1 MKRNYIGLACTGHDNALAVVNSRGEIVFAEATERFLQNKRSYNCIPDNPVLIGKIIKQYC 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 + D+EI+IA SWS++ + I++ + A + +D + + + +S Sbjct: 61 EADAEIVIAKSWSEDAAEILEQ--ERAKAGERLNLDYRPYSSGFIKYDIGAYQYVLKSVT 118 Query: 121 SMLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGER 180 ++ L++ ++ ++T +R + HHLTHAA+ C++SP+ A C V+DG GE Sbjct: 119 DSIQSSGVNLKF-YCEAVLGKKT--EFRSFNHHLTHAATACYTSPYSTAACIVVDGMGEG 175 Query: 181 SSFACFHYEGGRLKPIT--GGECVG--WSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAY 236 S +C+ Y +++ + +G SLG FYS +C CGFD +GEEWKVMGLA Y Sbjct: 176 ISVSCYSYRDNKIEELKFPSQSMLGNLAKSLGFFYSHLCGWCGFDPWAGEEWKVMGLAPY 235 Query: 237 GQHDEALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQR 296 G+ D+A+Y +LRE +AVD +++ P +KL R L A+LA+ GQ Sbjct: 236 GKFDQAIYEILRERIAVDNVDVYCPDPDWASA--SKLLKYIRTPDMPSLAAADLAHTGQV 293 Query: 297 VFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNAV 356 VF EV+ + L NL+ G+S+NLVF GGCALNSS NGKIL +T F+ +HVFSAPGDDGNAV Sbjct: 294 VFSEVMTSLLNNLYDLGISENLVFGGGCALNSSYNGKILESTKFKSVHVFSAPGDDGNAV 353 Query: 357 GAALLAHRDDHPETPNRKEPLSPYLGSCMSEETLNHFVKFSGVGKLTHCGNDAPKRAAAL 416 GAALLA+ D+P+ + SPYLGS +S +L + VK+ GV L H +D +R A L Sbjct: 354 GAALLAYEQDNPQPARNRSLASPYLGSTISRSSLENLVKYGGVTNLQHRPDDVCERVAQL 413 Query: 417 LADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPSIL 476 L+ +++GW+QG AEFGPR+LGNRSILADPR D+K N S + R+ + PFAPS+L Sbjct: 414 LSQGKIVGWVQGRAEFGPRSLGNRSILADPRRSDMKNSIN--SRVKFREEFR-PFAPSVL 470 Query: 477 DEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALVSE 536 +E+G ++F Y SPYMERTL+FRE +VP VVH DGTGR+Q+++++WN RF+ L+ E Sbjct: 471 EEYGDEYFINYQDSPYMERTLKFREGVRGKVPAVVHVDGTGRLQSVKKKWNNRFYRLIEE 530 Query: 537 FHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 FHRLTD+P+VLNTS NVMGKPI HSVEDALAVF+TSGLD + I++ +IEK Sbjct: 531 FHRLTDVPMVLNTSLNVMGKPIIHSVEDALAVFYTSGLDVLVIEDYVIEK 580 >ref|ZP_02381199.1| Carbamoyltransferase [Burkholderia ubonensis Bu] Length = 597 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 273/588 (46%), Positives = 370/588 (62%), Gaps = 22/588 (3%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MKRNY+GL S HD S+AIVD RG++VFAE ERYLQ+KR D F+R KL+ YC Sbjct: 1 MKRNYIGLGTSPHDPSLAIVDSRGQLVFAEDAERYLQNKRAWCSPPDDFIRIGKLLGEYC 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 +PD+E +I SW ++ R H+ + G + + R++ F + Sbjct: 61 EPDAEFVIVGSWREKFF------------KRLHFF-SFGPLKGLIRRKIGADNFDMLRCI 107 Query: 121 SMLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGER 180 + +P + E + R P+ +R YEHHLTH+A+ CF S F +A+ V+DG GE Sbjct: 108 ASYANPRHGINTEAHLQRVFGRRPVIHREYEHHLTHSAAACFGSTFSDAVSVVIDGLGES 167 Query: 181 SSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAYGQHD 240 +S FH++ G + I+ G S G +YSL+CE CGFD + GEEWKVMGLA YG Sbjct: 168 TSCKVFHFDRGVHREISTKPSQG--SFGQYYSLLCELCGFDPIGGEEWKVMGLAPYGAKS 225 Query: 241 EALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQRVFCE 300 + Y +LR ++ VD I RA +L +RR +GQ L+FA+LAY GQ VF E Sbjct: 226 DRYYGLLRSLLDVDDLRIREGRRA--AAAIGELVKLRRTRGQPALDFADLAYTGQLVFGE 283 Query: 301 VLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNAVGAAL 360 + L N H GLSDNLV SGGCALNS+ G + PFR HVF AP D+GN+VGAA Sbjct: 284 FVDELLANAHRRGLSDNLVLSGGCALNSAYVGSLAGRGPFRRSHVFCAPADNGNSVGAAW 343 Query: 361 LAHRDDHPET-PNRKEPLSPYLGSCMSEETLNHFVKFSGV-GKLTHCGNDAPKRAAALLA 418 LA+ DHP R E SPY+GS +S + L+ +++ G + T ++ +R A L+ Sbjct: 344 LAYHADHPGAWQPRAEAQSPYVGSRLSADALDKLLEYGGFDAQRTPDTDELCRRVATELS 403 Query: 419 DNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPSILDE 478 + +++ W+QG AEFGPRALGNRSILADPR PD+KER N + + R+ + PFAPSIL E Sbjct: 404 EGKIVAWVQGRAEFGPRALGNRSILADPRDPDVKERIN--AKVKFREEFR-PFAPSILAE 460 Query: 479 FGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALVSEFH 538 +F +PYMER LRFR APRVPGVVH DGTGR+QT++++ NPR+HAL+ FH Sbjct: 461 HAHAYFEHACDTPYMERALRFRPEMAPRVPGVVHVDGTGRLQTVKRELNPRYHALIEAFH 520 Query: 539 RLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 +T +P++LNTSFNVMGKPIAHSVEDA+A+F TSG+D + + ++++ K Sbjct: 521 AITGVPILLNTSFNVMGKPIAHSVEDAIAIFATSGIDVLVLDDVIVRK 568 >ref|YP_777809.1| carbamoyltransferase [Burkholderia ambifaria AMMD] gb|ABI91475.1| Carbamoyltransferase [Burkholderia ambifaria AMMD] Length = 594 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/591 (45%), Positives = 366/591 (61%), Gaps = 28/591 (4%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MKRNY+GL S HD S+AIVD +G++VFAE ERYLQ+KR D F+R KL+ YC Sbjct: 1 MKRNYIGLGTSPHDPSLAIVDSQGQLVFAEDAERYLQNKRAWNAPPDDFIRIGKLLGQYC 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 +PD+E +I SW + +Q A G + + R++ F + Sbjct: 61 EPDAEFVIVGSWRRKFFKRLQ-------------FFAFGPLRGMIRRKIGADNFDMLRCI 107 Query: 121 SMLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGER 180 + + + E + R P+ +R YEHHLTH+A+ CF S F +A+ V+DG GE Sbjct: 108 ASYANVRHGINTEAHLQRVFGRRPVIHREYEHHLTHSAAACFGSIFSDAISIVIDGLGES 167 Query: 181 SSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAYGQHD 240 +S FH++ G + ++ G S G +YSL+CE CGFD + GEEWKVMGLA YG + Sbjct: 168 TSCKVFHFDRGAHRELSTKPSQG--SFGQYYSLLCELCGFDPIGGEEWKVMGLAPYGSRN 225 Query: 241 EALYAMLREMVAVDGRNIHFPSRARMGQLQA--KLHAMRRRKGQSPLEFANLAYAGQRVF 298 E Y +LR ++ VD I R G A +L +RR + Q +EFA+LAY GQ VF Sbjct: 226 ERYYGLLRGLLEVDDLRI----REGRGAAAAIGELVKLRRTRDQPAIEFADLAYTGQLVF 281 Query: 299 CEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNAVGA 358 E + L N H GLSDNLV SGGCALNS+ G + PF HVF AP D+GN+VGA Sbjct: 282 GEFVDELLANAHRRGLSDNLVLSGGCALNSAYVGSLAGRGPFSRSHVFCAPADNGNSVGA 341 Query: 359 ALLAHRDDHPETPN-RKEPLSPYLGSCMSEETLNHFVKFSGVG--KLTHCGNDAPKRAAA 415 A LA+ +DHP R E SPY+GS +S + L +++ G ++ G + +R A Sbjct: 342 AWLAYHEDHPGVWQPRAEVQSPYVGSHLSSDALGKLLEYGGFDAERVADTG-ELCRRVAT 400 Query: 416 LLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPSI 475 L++ +++ W+QG AEFGPRALGNRSILADPR D+KER N + + R+ + PFAPSI Sbjct: 401 SLSEGKIVAWVQGRAEFGPRALGNRSILADPRDADVKERIN--ARVKFREEFR-PFAPSI 457 Query: 476 LDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALVS 535 L E +F +PYMER LRFR APRVPGVVH DGTGR+QT++++ NPR+HAL+ Sbjct: 458 LAEHARAYFEHACETPYMERALRFRPEMAPRVPGVVHVDGTGRLQTVKRELNPRYHALIE 517 Query: 536 EFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 FH +T +P++LNTSFNVMGKPIAHSVEDA+A+F TSG+D + + ++++ K Sbjct: 518 AFHAITGVPILLNTSFNVMGKPIAHSVEDAIAIFATSGIDVLVLDDVIVHK 568 >ref|ZP_08484417.1| Carbamoyltransferase [Methylomicrobium album BG8] gb|EGL04547.1| Carbamoyltransferase [Methylomicrobium album BG8] Length = 583 Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/592 (44%), Positives = 372/592 (62%), Gaps = 19/592 (3%) Query: 1 MKRNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYC 60 MK +GL+ ++HDS++AIVD G+V+FAEATER+LQ+KR + D R +L++ YC Sbjct: 1 MKTYCIGLSVTYHDSALAIVDAAGDVLFAEATERFLQNKRALNAEPDQLFRIPELLETYC 60 Query: 61 DPDSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQLSRQIFYSRSQL 120 I +A++W L E +R + A G + + R S Y + Sbjct: 61 PDPGAITVASNWRKRRP------LYESLMSRLGLLSAPGLLKDGIKRLRSPLGNYQLHHM 114 Query: 121 SMLEHPA-RLLEYELSQ--SDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGF 177 +H + R L + +R+ I + Y+HHLTHAA+ C+ SPF+ A CAV+D F Sbjct: 115 MACQHNSIRRAGLNLVRILRERYPHCKIRFANYDHHLTHAAAACYGSPFEEAACAVIDSF 174 Query: 178 GERSSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGLAAYG 237 GER + A + Y GRL+P+ G +SLG++Y + E CGFD L GEEWKVMGLA YG Sbjct: 175 GERGAMAFYRYRDGRLEPLYEARGAGTASLGLYYMKITELCGFDWLKGEEWKVMGLAPYG 234 Query: 238 QHDEALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMR--RRKGQSPLEFA-NLAYAG 294 + +EALYA+L+ + +DG F +R + ++ ++ + + K Q P+E A +LA+ G Sbjct: 235 RLNEALYALLQSTITLDG----FEARHQGKKIFDRIDRLDVFKHKQQDPIELAADLAFTG 290 Query: 295 QRVFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGN 354 QR F E + L +L SDNL +GGCALNSS NG+I TPFR ++V SAP DDG Sbjct: 291 QRFFAETVNRLLTHLQHVTQSDNLALAGGCALNSSNNGRITQETPFRQVYVPSAPADDGC 350 Query: 355 AVGAALLAHRDDHPETPNRKEPLSPYLGSCMSEETLNHFVKFSGVGKLTHCGNDAPKRAA 414 A+GAA LAH D HP P+ K +PY GS ++EE ++ ++F+ + H + AA Sbjct: 351 ALGAAWLAHHDAHPAPPSPKAIQTPYTGSVIAEEAIDRLLRFNRSLTIEHLPESICEAAA 410 Query: 415 ALLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPS 474 LA+ R++GW+QG AEFGPRALGNRSILADPR + ++ N I R+ + PFAPS Sbjct: 411 QRLAEGRLVGWLQGRAEFGPRALGNRSILADPRFAETQDLIN--EKIKFRETFR-PFAPS 467 Query: 475 ILDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALV 534 IL EFG+D+F Y SPYM++TL+ RE R+ V H DGTGR+QT++Q+WNPRF+ L+ Sbjct: 468 ILHEFGTDYFEHYQESPYMDKTLKIRETMRGRIAAVCHVDGTGRLQTVKQEWNPRFYRLI 527 Query: 535 SEFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 F ++T +P++LNTSFNVMGKP+AHS+EDA+A+F T+GLD + + + LI K Sbjct: 528 DCFRQVTGVPVLLNTSFNVMGKPLAHSLEDAIALFLTTGLDILVVNDYLIGK 579 >emb|CBJ40402.1| putative carbamoyltransferase protein of the NodU family [Ralstonia solanacearum CMR15] Length = 581 Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust. Identities = 261/592 (44%), Positives = 355/592 (59%), Gaps = 21/592 (3%) Query: 3 RNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYCDP 62 + Y+GLA + H++++AIV+ GE+VFAEATER+LQ+KR + D +R KL+ YC Sbjct: 2 KYYIGLACTGHENALAIVNPDGEIVFAEATERFLQNKRAVNTPPDDPLRIPKLLKQYCGD 61 Query: 63 DSEIIIATSWSDETSAIMQGHLDECAATRKHYVDAL-GKVPAPLSRQLSRQIFYSRSQLS 121 I++A +WS E + M+ H + AL G P ++R F++ Sbjct: 62 CDSIVVAKTWSREAAQKMR-------TDAAHILKALAGTDPRTDRDWVARVAFHAGLGDK 114 Query: 122 MLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGERS 181 ++E RL + + + R YEHHLTHAA C +SPFD+A+CAV DG+GE Sbjct: 115 LIEPNYRLAGNGIERYCSLQGLEHSVRSYEHHLTHAAYACHTSPFDDAVCAVFDGYGEGV 174 Query: 182 SFACFHYEGGRLKPI-----TGGECVGWSSLGIFYSL-VCEACGFDHLSGEEWKVMGLAA 235 + FHY G+++PI G+ +SLG++Y +C G D ++GEEWKVMGLA Sbjct: 175 HSSYFHYRNGKVEPIQRARSAKGQYGSLASLGLYYGYTICALLGLDIVNGEEWKVMGLAP 234 Query: 236 YGQHDEALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQ 295 YGQ + A +LR + VDG ++ A +L A RR GQS A++AY Q Sbjct: 235 YGQLNPAFLDVLRRHIYVDGLDLVMDGNA--AGTYRELQAFARRSGQSYESVADIAYTAQ 292 Query: 296 RVFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNA 355 F E++ L L GLSD LV +GGCALNS+ NG+++ + F L+V AP DDGNA Sbjct: 293 HYFSELMLEMLAGLRQLGLSDRLVLTGGCALNSTFNGEVIPRSGFAQLYVPPAPSDDGNA 352 Query: 356 VGAALLAHRDDHPETPNRKEPLSPYLGSCMSEETLNHFVKFSG-VGKLTHCGNDAPKRAA 414 VGAALLA+ +D P R SPYLGS + + L F+K +G++ + A Sbjct: 353 VGAALLAYAEDGGAMP-RPAFHSPYLGSAIDDRELAPFLKNGAMLGQVPVTPGELCDYVA 411 Query: 415 ALLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPS 474 LAD +VIGWIQG AEFGPR+LGNRSILADPR +KER N +++ R+ + PFAPS Sbjct: 412 QELADGKVIGWIQGSAEFGPRSLGNRSILADPRRASMKERIN--AIVKFREGFR-PFAPS 468 Query: 475 ILDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALV 534 ILDEFG +F Y A+PYME+TL+ RE +P V H D TGR+QT+R+ WNPRFHAL+ Sbjct: 469 ILDEFGDRYFEGYSATPYMEKTLKIREAYREAIPAVCHVDHTGRLQTVRRDWNPRFHALL 528 Query: 535 SEFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 S FH T P++LNTS NVMGKPI HS DA VF ++GLD + I + + K Sbjct: 529 SAFHARTGTPVLLNTSLNVMGKPIVHSAADAFTVFLSTGLDLLVINDHVFSK 580 >ref|NP_522349.1| putative transferase protein [Ralstonia solanacearum GMI1000] emb|CAD17939.1| putative carbamoyltransferase; protein [Ralstonia solanacearum GMI1000] Length = 581 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 259/592 (43%), Positives = 355/592 (59%), Gaps = 21/592 (3%) Query: 3 RNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYCDP 62 + Y+GLA + H++++AIV+ GE+VFAEATER+LQ+KR + D +R +L+ YC Sbjct: 2 KYYIGLACTGHENALAIVNPDGEIVFAEATERFLQNKRAVNTPPDDPLRIPRLLKQYCSD 61 Query: 63 DSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQ-LSRQIFYSRSQLS 121 I++A +WS E M+ H + AL A R ++R F++ Sbjct: 62 CDAIVVAKTWSREAPQKMR-------TDAAHILKALAGTDARTDRDWVARVAFHAGLGDK 114 Query: 122 MLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGERS 181 ++E RL + + + R YEHHLTHAA C +SPFD+A+CAV DG+GE Sbjct: 115 LIEPNYRLAGNGIERYCSLQGLEHSVRSYEHHLTHAAYACHTSPFDDAVCAVFDGYGEGV 174 Query: 182 SFACFHYEGGRLKPI-----TGGECVGWSSLGIFYSL-VCEACGFDHLSGEEWKVMGLAA 235 + FHY G+++PI G+ +SLG++Y +C G D ++GEEWKVMGLA Sbjct: 175 HSSYFHYRNGKVEPIRRARSAKGQYGSLASLGLYYGYTICALLGLDIVNGEEWKVMGLAP 234 Query: 236 YGQHDEALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQ 295 YGQ + A +LR + VDG ++ A +L A RR GQS A++AY Q Sbjct: 235 YGQLNPAFLDVLRRHIYVDGLDLVMDGNA--AGTYRELQAFARRPGQSYESVADIAYTAQ 292 Query: 296 RVFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNA 355 F E++ L L GLSD LV +GGCALNS+ NG+++ + F L+V AP DDGNA Sbjct: 293 HYFSELMLEMLAGLRQLGLSDRLVLTGGCALNSTFNGEVIPRSGFAQLYVPPAPSDDGNA 352 Query: 356 VGAALLAHRDDHPETPNRKEPLSPYLGSCMSEETLNHFVKFSG-VGKLTHCGNDAPKRAA 414 VGAALLA+ +D +R SPYLGS + + L F+K +G++ + A Sbjct: 353 VGAALLAYAEDGGAM-SRPAFHSPYLGSAIDDRELAPFLKNGAMLGQVPVTPGELCDYVA 411 Query: 415 ALLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPS 474 LAD +VIGWIQG AEFGPR+LGNRSILADPR +KER N +++ R+ + PFAPS Sbjct: 412 QELADGKVIGWIQGSAEFGPRSLGNRSILADPRRASMKERIN--AIVKFREGFR-PFAPS 468 Query: 475 ILDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALV 534 ILDEFG +F +Y A+PYME+TL+ RE +P V H D TGR+QT+R+ WNPRFHAL+ Sbjct: 469 ILDEFGDRYFEDYSATPYMEKTLKIREAYREAIPAVCHVDHTGRLQTVRRDWNPRFHALL 528 Query: 535 SEFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 S FH T P++LNTS NVMGKPI HS DA VF ++GLD + I + + K Sbjct: 529 SAFHARTGTPVLLNTSLNVMGKPIVHSAADAFTVFLSTGLDLLVINDHVFSK 580 >ref|YP_003749691.1| carbamoyltransferase protein of the nodu family [Ralstonia solanacearum PSI07] emb|CBJ35060.1| putative carbamoyltransferase protein of the NodU family [Ralstonia solanacearum PSI07] emb|CCA83476.1| putative carbamoyltransferase protein of the NodU family [blood disease bacterium R229] Length = 582 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 255/592 (43%), Positives = 351/592 (59%), Gaps = 21/592 (3%) Query: 3 RNYVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYCDP 62 + Y+GLA + H++++AIV+ GE+VFAEATER+LQ+KR + D +R +L+ YC+P Sbjct: 2 KYYIGLACTGHENALAIVNSDGEIVFAEATERFLQNKRAVNTPPDDPLRIPRLLKQYCEP 61 Query: 63 DSEIIIATSWSDETSAIMQGHLDECAATRKHYVDALGKVPAPLSRQ-LSRQIFYSRSQLS 121 I++A +WS + M+ H + AL A R ++R F++ Sbjct: 62 CDAIVVAKTWSTDAPQKMR-------TDAAHILKALAGADARADRDWIARVAFHAGLGDK 114 Query: 122 MLEHPARLLEYELSQSDRWERTPIHYRRYEHHLTHAASGCFSSPFDNALCAVLDGFGERS 181 ++E +L + + + R YEHHLTHAA C++SPFD+A+CAV DG+GE Sbjct: 115 LIEPNYKLAGSGIERYCSLQGLAYSVRSYEHHLTHAAYACYTSPFDDAVCAVFDGYGEGV 174 Query: 182 SFACFHYEGGRLKPI-----TGGECVGWSSLGIFYSL-VCEACGFDHLSGEEWKVMGLAA 235 + FHY G ++PI G +SLG++Y +C G D ++GEEWKVMGLA Sbjct: 175 HSSYFHYRNGTIEPIPRVRSAKGRYGSLASLGLYYGYTICALLGLDIVNGEEWKVMGLAP 234 Query: 236 YGQHDEALYAMLREMVAVDGRNIHFPSRARMGQLQAKLHAMRRRKGQSPLEFANLAYAGQ 295 YGQ + +LR + VDG ++ A +L + RR GQS A++AY Q Sbjct: 235 YGQLNHDFLEVLRRHIYVDGLDLVMDENA--ASTYRELQSYARRSGQSYESVADIAYTAQ 292 Query: 296 RVFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSAPGDDGNA 355 F E++ L L GLSD LV +GGCALNS+ NG + + F L++ AP DDGNA Sbjct: 293 HYFGELMLEMLTGLRQLGLSDRLVLTGGCALNSTFNGCVAPRSGFEQLYIPPAPSDDGNA 352 Query: 356 VGAALLAHRDDHPETPNRKEPLSPYLGSCMSEETLNHFVKFSG-VGKLTHCGNDAPKRAA 414 VGAALLA+ +D P R SPYLGS + ++ L F+K +G + D A Sbjct: 353 VGAALLAYAEDGGTMP-RPAFHSPYLGSAIDDKELEPFLKHGAMLGLVLVPPGDLCDYVA 411 Query: 415 ALLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQISKGPFAPS 474 LA +VIGWIQGCAEFGPR+LGNRSILADPR +KER N +++ R+ + PFAPS Sbjct: 412 QELAAGKVIGWIQGCAEFGPRSLGNRSILADPRQASMKERIN--AIVKFREGFR-PFAPS 468 Query: 475 ILDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWNPRFHALV 534 ILDEFG +F +Y A+PYME+TL+ R+ +P V H D TGR+QT+RQ WNPRFH L+ Sbjct: 469 ILDEFGDHYFEDYSATPYMEKTLKIRDVYREAIPAVCHVDHTGRLQTVRQDWNPRFHELL 528 Query: 535 SEFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 FH T P++LNTS NVMGKPI HS DA VF ++GLD + I + + K Sbjct: 529 RAFHAHTGTPVLLNTSLNVMGKPIVHSAADAFTVFLSTGLDLLVINDHVFSK 580 >ref|ZP_07746608.1| Carbamoyltransferase [Mucilaginibacter paludis DSM 18603] gb|EFQ77381.1| Carbamoyltransferase [Mucilaginibacter paludis DSM 18603] Length = 587 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 253/599 (42%), Positives = 360/599 (60%), Gaps = 34/599 (5%) Query: 5 YVGLANSFHDSSIAIVDERGEVVFAEATERYLQHKRTIGIASDLFMRTAKLIDNYCD--P 62 Y+GLA++FHD +IAI+D G V+FAE+TERYLQ+KR +G +D + I NYC Sbjct: 6 YIGLASTFHDPAIAILDRDGTVIFAESTERYLQNKRAMGSPADTEIWIENQIRNYCPNAA 65 Query: 63 DSEIIIATSWSDETSAIMQ-------GHLDECAATRKHYVDALGKVPAPLSRQLSRQIFY 115 ++E I+T+WS ++ + A RK + K P + F Sbjct: 66 EAEFHISTTWSQNYVNSLKLFYNLGFYNFSPTAIIRKT-IHTAYKSMLPNENLV---WFL 121 Query: 116 SRSQLSMLEHPARLLEYELSQSDRW--ERTPIHYRRYEHHLTHAASGCFSSPFDNALCAV 173 ++ S ++ A L ++ RW I R+ HH THAA FSS FDNA C V Sbjct: 122 NKQFASNIQTGANL-----ERTLRWSFNNNSIKRYRFNHHETHAAYSAFSSTFDNATCLV 176 Query: 174 LDGFGERSSFACFHYEGGRLKPITGGECVGWSSLGIFYSLVCEACGFDHLSGEEWKVMGL 233 +DG GE+ S + F Y +L+ G G SLG FY+L+ C F+ ++GEEWKVMGL Sbjct: 177 VDGIGEKGSVSYFKYADNQLE--LKGHHKGSESLGFFYTLITLLCEFNPIAGEEWKVMGL 234 Query: 234 AAYGQHDEALYAMLREMVAVDGRNIHFPSRARM-----GQLQAKLHAMRRRKGQSPLEFA 288 A YG+ D+ Y +L ++++ N+ F + + G + L+ + A Sbjct: 235 APYGKKDDTYYKLLNSLISIKDCNVKFKNNPNLILKVIGVINEDLNGSKESVFAKK---A 291 Query: 289 NLAYAGQRVFCEVLFAFLKNLHATGLSDNLVFSGGCALNSSANGKILANTPFRDLHVFSA 348 NLAY GQ +F E + L NL+ G S+NL SGGCALNS+ NGKI+ T F++L++ SA Sbjct: 292 NLAYTGQLLFSEYMIELLNNLYKKGYSENLALSGGCALNSAFNGKIICETNFKELYIPSA 351 Query: 349 PGDDGNAVGAALLAHRDDHPETPN-RKEPLSPYLGSCMSEETLNHFVKFSGVGKLTHCGN 407 PGDDG A+GAA L+ + D P+ R LSPYLG+ ++++ + +++KFSG ++ Sbjct: 352 PGDDGTAIGAAYLSLKRDRPDMKMVRTNKLSPYLGNQINDQEVENYIKFSGNKRVEKYPG 411 Query: 408 DAPKRAAALLADNRVIGWIQGCAEFGPRALGNRSILADPRSPDIKERANLXSLIHARQIS 467 A LLA ++IGW QG AEFGPRALGNRSILADPR D+K+ N S I R+ Sbjct: 412 MVHMVTAKLLAQGKLIGWSQGRAEFGPRALGNRSILADPRKVDMKDVIN--SRIKFREEF 469 Query: 468 KGPFAPSILDEFGSDFFHEYHASPYMERTLRFRENAAPRVPGVVHADGTGRVQTIRQQWN 527 + PFAPSIL E+G+++F +Y SPYMERTL+F++ ++P VVH D TGR+Q++ + N Sbjct: 470 R-PFAPSILAEYGNNYFEDYQDSPYMERTLKFKDEVLSKIPAVVHVDQTGRLQSVSKDLN 528 Query: 528 PRFHALVSEFHRLTDIPLVLNTSFNVMGKPIAHSVEDALAVFFTSGLDAMFIQNILIEK 586 P FHAL+ F++LT +P++LNTSFNVMGKPI +S +DAL VF+ SGLD + I + +I K Sbjct: 529 PTFHALIDCFNQLTGVPIILNTSFNVMGKPIINSFQDALNVFYNSGLDVLVINDYVISK 587