BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0145.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002947958.1| hypothetical protein Vapar_6128 [Variovorax ... 256 6e-67 gb|ACN43569.1| PnpC1 [Pseudomonas putida] 200 7e-50 gb|ACZ51386.1| hydroquinone dioxygenase alpha subunit [Pseudomon... 197 4e-49 gb|ABU50917.1| hydroquinone dioxygenase small subunit [Pseudomon... 196 1e-48 gb|ADB81386.1| hydroquinone dioxygenase small subunit [Pseudomon... 195 2e-48 ref|NP_927509.1| hypothetical protein plu0140 [Photorhabdus lumi... 193 6e-48 ref|YP_837061.1| hypothetical protein Bcen2424_3429 [Burkholderi... 185 2e-45 gb|EGD05928.1| hypothetical protein B1M_03959 [Burkholderia sp. ... 185 2e-45 gb|AEH41575.1| hydroquinone dioxygenase small subunit [Sphingomo... 184 4e-45 ref|YP_001586024.1| hypothetical protein Bmul_6074 [Burkholderia... 183 6e-45 >ref|YP_002947958.1| hypothetical protein Vapar_6128 [Variovorax paradoxus S110] gb|ACS22692.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 169 Score = 256 bits (655), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 120/166 (72%), Positives = 142/166 (85%), Gaps = 1/166 (0%) Query: 1 VEYKTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLR 60 V Y+T FGSL+ +EKG V+ I+DDV+HYAFSNCF+IA+ S PYEKVVFG NQ YVLE LR Sbjct: 3 VAYQTRFGSLKHFEKGHVEPIDDDVRHYAFSNCFEIASISRPYEKVVFGQNQIYVLETLR 62 Query: 61 AEGASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIR 120 AEG SPWYTSAHDEFAL MD EV+VHLV+LD AQ + D +K+GAVLVQG P+G+KMGW++ Sbjct: 63 AEGTSPWYTSAHDEFALVMDGEVEVHLVQLDAAQAVADKDKNGAVLVQGEPRGRKMGWMK 122 Query: 121 LKRGHQALIPANTAYQFQAS-RPGVIILQTCKGDLSVEKWAEICQA 165 L RGHQ L+P NTAYQF+A+ PGVI+LQTCKGDLSVEKWA+ICQ Sbjct: 123 LSRGHQGLLPKNTAYQFRAAGDPGVIVLQTCKGDLSVEKWADICQT 168 >gb|ACN43569.1| PnpC1 [Pseudomonas putida] Length = 164 Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 93/160 (58%), Positives = 118/160 (73%), Gaps = 4/160 (2%) Query: 4 KTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAEG 63 KT FGSLE+Y KG V++I+ + +HYAFSN F++A S PY+KVV G+N YV+E LRAEG Sbjct: 7 KTVFGSLENYTKGTVEIISGEARHYAFSNIFEVAEKSPPYQKVVVGLNLGYVIETLRAEG 66 Query: 64 ASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIRLKR 123 SPW+T+AHDEFA+ MD EV V +KLD E +G L P G+ MG++ LKR Sbjct: 67 QSPWFTAAHDEFAIVMDGEVRVDFLKLDTPLA----EGEGTRLAGEIPAGKPMGYVLLKR 122 Query: 124 GHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 GHQ L+PA TAY+F++SRPGV++ QT KG LSVEKWAEIC Sbjct: 123 GHQCLLPAGTAYRFESSRPGVLLQQTIKGPLSVEKWAEIC 162 >gb|ACZ51386.1| hydroquinone dioxygenase alpha subunit [Pseudomonas sp. NyZ402] Length = 164 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 91/160 (56%), Positives = 118/160 (73%), Gaps = 4/160 (2%) Query: 4 KTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAEG 63 KT FGSLE+Y KG V++I+ + +HYAFSN F++A NS PY+KVV G+N YV+E LR EG Sbjct: 7 KTVFGSLENYTKGSVELISGEARHYAFSNIFEVAENSPPYQKVVVGLNLGYVIETLRTEG 66 Query: 64 ASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIRLKR 123 SPW+T++HDEFA+ MD EV V +KLD E +G L P G+ MG++ LKR Sbjct: 67 QSPWFTASHDEFAIVMDGEVRVDFLKLDTPLA----EGEGTRLAGEIPVGKPMGYVLLKR 122 Query: 124 GHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 GHQ L+PA TAY+F++SRPGV++ QT KG LSVEKWA+IC Sbjct: 123 GHQCLLPAGTAYRFESSRPGVLLQQTIKGPLSVEKWADIC 162 >gb|ABU50917.1| hydroquinone dioxygenase small subunit [Pseudomonas sp. WBC-3] Length = 164 Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/163 (56%), Positives = 118/163 (72%), Gaps = 4/163 (2%) Query: 1 VEYKTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLR 60 V T F SL+++ KG V++I+ + +HYAFSN F++A NS PYEKVV G+N YV+E LR Sbjct: 4 VAVNTVFASLDNFRKGTVEIISGEARHYAFSNIFEVAQNSKPYEKVVVGLNLGYVVETLR 63 Query: 61 AEGASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIR 120 AEG SPW+T+AHDEFA+ MD EV V +KLD + +G L P G+ MG++ Sbjct: 64 AEGQSPWFTAAHDEFAIVMDGEVRVEFLKLDAPSK----HGEGTHLAGELPVGKPMGYVL 119 Query: 121 LKRGHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 LKRGHQ L+PA +AY+F+ASRPGVI+ QT KG LSVEKWAEIC Sbjct: 120 LKRGHQCLLPAGSAYRFEASRPGVILQQTIKGPLSVEKWAEIC 162 >gb|ADB81386.1| hydroquinone dioxygenase small subunit [Pseudomonas sp. 1-7] Length = 164 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 91/159 (57%), Positives = 117/159 (73%), Gaps = 4/159 (2%) Query: 5 TYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAEGA 64 T F SL+++ KG V++I+ + +HYAFSN F++A NS PYEKVV G+N YV+E LRAEG Sbjct: 8 TVFASLDNFRKGTVEIISGEARHYAFSNIFEVAQNSKPYEKVVVGLNLGYVVETLRAEGQ 67 Query: 65 SPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIRLKRG 124 SPW+T+AHDEFA+ MD EV V +KLD + +G L P G+ MG++ LKRG Sbjct: 68 SPWFTAAHDEFAIVMDGEVRVEFLKLDAPSK----HGEGTHLAGELPVGKPMGYVLLKRG 123 Query: 125 HQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 HQ L+PA +AY+F+ASRPGVI+ QT KG LSVEKWAEIC Sbjct: 124 HQCLLPAGSAYRFEASRPGVILQQTIKGPLSVEKWAEIC 162 >ref|NP_927509.1| hypothetical protein plu0140 [Photorhabdus luminescens subsp. laumondii TTO1] emb|CAE12435.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 166 Score = 193 bits (491), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 86/163 (52%), Positives = 119/163 (73%), Gaps = 1/163 (0%) Query: 1 VEYKTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLR 60 V+YKT F S+++Y KGG+Q + +D K Y FSN ++IA SAPY+++V IN +Y +E+ R Sbjct: 3 VQYKTAFASIDNYHKGGIQALVEDPKRYVFSNMYEIAATSAPYDRIVAAINLDYTIEIAR 62 Query: 61 AEGASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGAPQGQKMGWIR 120 AEG SPW+ AHDEF + MD +V+VH VKL + + D +KDGAV + G P GQKMG I Sbjct: 63 AEGTSPWFACAHDEFVVAMDYDVEVHFVKL-TDESVIDEDKDGAVKLNGTPDGQKMGCIY 121 Query: 121 LKRGHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 LKRGHQAL+P AY+F A +P +++Q+ GD+SV+KWA+IC Sbjct: 122 LKRGHQALLPEKVAYRFHADKPATLMIQSILGDVSVQKWADIC 164 >ref|YP_837061.1| hypothetical protein Bcen2424_3429 [Burkholderia cenocepacia HI2424] ref|YP_001777729.1| hypothetical protein Bcenmc03_4088 [Burkholderia cenocepacia MC0-3] ref|ZP_04942497.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gb|ABK10168.1| conserved hypothetical protein [Burkholderia cenocepacia HI2424] gb|EAY65668.1| conserved hypothetical protein [Burkholderia cenocepacia PC184] gb|ACA93239.1| conserved hypothetical protein [Burkholderia cenocepacia MC0-3] Length = 164 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 87/163 (53%), Positives = 115/163 (70%), Gaps = 8/163 (4%) Query: 3 YKTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAE 62 + T FGSL+ Y KG +++ + +HYAFSN F++A+ SAPYEKVV G N YV+EVLR + Sbjct: 6 FHTVFGSLDGYRKGEIEITSGSAQHYAFSNVFEVASKSAPYEKVVAGKNLEYVIEVLRTD 65 Query: 63 GASPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGA--PQGQKMGWIR 120 G SPW+ AHDEFA+ MD EV + +KLD DP + G V+ P G+ MG++ Sbjct: 66 GQSPWFACAHDEFAIQMDGEVRIDFIKLD------DPPQSGRGTVRAGAHPAGRNMGYVV 119 Query: 121 LKRGHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 L++GHQAL+PA AY+F ASRPGV ++QT G+LSVEKWAEIC Sbjct: 120 LRKGHQALLPAGCAYRFTASRPGVALVQTVLGELSVEKWAEIC 162 >gb|EGD05928.1| hypothetical protein B1M_03959 [Burkholderia sp. TJI49] Length = 164 Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 89/162 (54%), Positives = 113/162 (69%), Gaps = 6/162 (3%) Query: 3 YKTYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAE 62 Y T FGSLE+Y KG +++ + +HYAFSN FD+A+ SAPYEKVV G N YV+EVLR E Sbjct: 6 YHTVFGSLENYRKGEIEITSGSARHYAFSNVFDVASRSAPYEKVVAGKNLEYVIEVLRTE 65 Query: 63 GASPWYTSAHDEFALCMDKEVDVHLVKLD-PAQQIQDPEKDGAVLVQGAPQGQKMGWIRL 121 G SPW+ AHDEFA+ MD EV + +KLD P + Q G V P G+KMG + L Sbjct: 66 GQSPWFACAHDEFAIQMDGEVQIEFIKLDSPPRAGQ-----GTVSAGAQPAGRKMGHVIL 120 Query: 122 KRGHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 + GHQAL+PA AY+F A +PGV ++QT G+LSVEKWA+IC Sbjct: 121 RNGHQALLPAGCAYRFTARKPGVALVQTMLGELSVEKWADIC 162 >gb|AEH41575.1| hydroquinone dioxygenase small subunit [Sphingomonas sp. TTNP3] Length = 170 Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 81/161 (50%), Positives = 116/161 (72%), Gaps = 1/161 (0%) Query: 5 TYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAEGA 64 T FG+L Y KGGV++I+DD ++Y FSN F++A N+APYE+V G N YV+E RAEG Sbjct: 6 TEFGALTDYRKGGVEIIDDDPRNYVFSNVFEVAANAAPYERVAVGKNFEYVIESARAEGT 65 Query: 65 SPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLV-QGAPQGQKMGWIRLKR 123 S W++ AHDEF L MD +++VHL+KLD + DP+ +GAV + + P+G+KMG I L+R Sbjct: 66 SGWFSCAHDEFVLAMDGQIEVHLLKLDNSDAYVDPDSEGAVAIGEALPEGRKMGRIVLRR 125 Query: 124 GHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEICQ 164 GH AL+P AY+F A +P ++ Q+ +G ++V+KW EICQ Sbjct: 126 GHMALLPVGAAYRFYAEQPAAMLFQSIEGAVTVQKWGEICQ 166 >ref|YP_001586024.1| hypothetical protein Bmul_6074 [Burkholderia multivorans ATCC 17616] ref|YP_001941276.1| hypothetical protein BMULJ_05454 [Burkholderia multivorans ATCC 17616] gb|ABX19732.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] dbj|BAG47286.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 164 Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 88/161 (54%), Positives = 112/161 (69%), Gaps = 8/161 (4%) Query: 5 TYFGSLESYEKGGVQVINDDVKHYAFSNCFDIANNSAPYEKVVFGINQNYVLEVLRAEGA 64 T FGSL+SY +G +++ + KHYAFSN FDIA+ SAPYEKVV G N YV+EVLR EG Sbjct: 8 TVFGSLDSYTRGEIEITSGSAKHYAFSNIFDIASKSAPYEKVVAGKNLEYVIEVLRTEGE 67 Query: 65 SPWYTSAHDEFALCMDKEVDVHLVKLDPAQQIQDPEKDGAVLVQGA--PQGQKMGWIRLK 122 SPW+ AHDEFA+ MD EV + +KL P G V P G++MG++ L+ Sbjct: 68 SPWFACAHDEFAIQMDGEVRIEFIKL------HSPPTTGRGTVSAGIQPAGREMGYVVLR 121 Query: 123 RGHQALIPANTAYQFQASRPGVIILQTCKGDLSVEKWAEIC 163 +GHQAL+PA AY+F AS+PGV ++QT G+LSVEKWAEIC Sbjct: 122 KGHQALLPAGCAYRFIASKPGVALVQTVLGELSVEKWAEIC 162