BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0122.p (323 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07774636.1| transcriptional regulator, AraC family [Pseud... 192 7e-47 ref|YP_004354998.1| AraC family transcriptional regulator [Pseud... 192 8e-47 ref|YP_002873663.1| AraC family regulatory protein [Pseudomonas ... 189 7e-46 ref|YP_004474108.1| AraC family transcriptional regulator [Pseud... 171 1e-40 ref|YP_984051.1| helix-turn-helix domain-containing protein [Pol... 159 7e-37 ref|ZP_03588608.1| transcriptional activator FeaR [Burkholderia ... 156 5e-36 ref|YP_980847.1| helix-turn-helix domain-containing protein [Pol... 148 9e-34 ref|YP_001833589.1| AraC family transcriptional regulator [Beije... 144 2e-32 ref|ZP_02361029.1| putative transcriptional regulator [Burkholde... 139 7e-31 ref|YP_440604.1| AraC family transcriptional regulator [Burkhold... 136 5e-30 >ref|ZP_07774636.1| transcriptional regulator, AraC family [Pseudomonas fluorescens WH6] gb|EFQ64187.1| transcriptional regulator, AraC family [Pseudomonas fluorescens WH6] Length = 332 Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 115/328 (35%), Positives = 177/328 (53%), Gaps = 13/328 (3%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDLAASGISF-SPGDSLGFRGCIEYGD 59 M+ LA V TD + ++ R WK ++S ++ R PD + +F P F+G +EYGD Sbjct: 1 MNHLACVSTDQVVRSDRLMKWKEFMSDHLGRTPDYIKRLESTFIDPLHDSNFQGRLEYGD 60 Query: 60 LGEASLCRVRNDACRYVRQPAQT---QDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWS 116 LG+ CR+ A RY R ++ DTP M+++Q G S F QGQ+ VL P + Sbjct: 61 LGQLRFCRMTASAHRYSRHLSKAIDALDTP--RMLIMQVAGVSHFEQGQQSSVLAPDEML 118 Query: 117 LYDTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSFGRTGIERMVREQISSAF 176 L D F++ S EH +LL ++ L T L GR G+ RM+ IS A+ Sbjct: 119 LVDCGKPFNVTSMQGCEHFILLFQGASVQLAQTADMHLN----GRNGLGRMLMHLISDAY 174 Query: 177 RECHAMPLRTGNVVANSILQLVVSALEASSENP---GGAAMGLRQRIVQFIDEHLSDEHL 233 + + + ++ +SI L+ +AL+ E + R+ +I+ HL+D L Sbjct: 175 NQYPLLNNHSAGLIGDSITGLLDNALKNKQEEKQLEHDFRFFKQNRLKAYIERHLADRDL 234 Query: 234 TVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIAFR 293 T+ RIA A S R +HR F DE G +V++Y+WQRRL++ DL++ E A ++TEIA+ Sbjct: 235 TIERIANAEQCSVRSLHRAFQDELGCSVSEYIWQRRLSRCAEDLRNREHAHRSLTEIAYA 294 Query: 294 WGFSNAAHFSHAFKQAYGLSPRECRVAA 321 WG+ +++HFS FK +G+SPR R A Sbjct: 295 WGYGSSSHFSRHFKSTFGMSPRLFRDTA 322 >ref|YP_004354998.1| AraC family transcriptional regulator [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69994.1| putative Transcription factor, AraC family [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 332 Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 115/328 (35%), Positives = 177/328 (53%), Gaps = 13/328 (3%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDLAASGISF-SPGDSLGFRGCIEYGD 59 M+ LA V TD + ++ R WK ++S ++ R PD + +F P F+G +EYGD Sbjct: 1 MNHLACVSTDQVVRSDRLMKWKEFMSDHLGRTPDYIKRLESTFIDPLHESNFQGRLEYGD 60 Query: 60 LGEASLCRVRNDACRYVRQPAQT---QDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWS 116 LG+ CR+ A RY R ++ DTP M+++Q G S F QGQ+ VL P + Sbjct: 61 LGQLRFCRMTASAHRYSRHLSKAVDALDTP--RMLIMQVAGVSHFEQGQQSSVLAPDEML 118 Query: 117 LYDTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSFGRTGIERMVREQISSAF 176 L D F++ S EH +LL ++ L T L GR G+ RM+ IS A+ Sbjct: 119 LVDCGKPFNVTSTQGCEHFILLFQGASGQLAQTGDMHLN----GRNGLGRMLMHLISDAY 174 Query: 177 RECHAMPLRTGNVVANSILQLVVSALEASSENP---GGAAMGLRQRIVQFIDEHLSDEHL 233 + + + ++ +SI L+ +AL+ E + R+ +I+ HL+D L Sbjct: 175 NQYPLLNNHSAGLIGDSITGLLDNALKNKQEEKQLEHDFRFFKQNRLKAYIERHLADRDL 234 Query: 234 TVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIAFR 293 T+ RIA A S R +HR F DE G +V++Y+WQRRL++ DL++ E A ++TEIA+ Sbjct: 235 TIERIANAEQCSVRSLHRAFQDELGCSVSEYIWQRRLSRCAEDLRNREHAHRSLTEIAYA 294 Query: 294 WGFSNAAHFSHAFKQAYGLSPRECRVAA 321 WG+ +++HFS FK +G+SPR R A Sbjct: 295 WGYGSSSHFSRHFKSTFGMSPRLFRDTA 322 >ref|YP_002873663.1| AraC family regulatory protein [Pseudomonas fluorescens SBW25] emb|CAY50581.1| AraC family regulatory protein [Pseudomonas fluorescens SBW25] Length = 332 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 177/328 (53%), Gaps = 13/328 (3%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDLA-ASGISFSPGDSLGFRGCIEYGD 59 M+ LA V T+ + ++ R WK ++S ++ R P+ + P + F+G +EYGD Sbjct: 1 MNNLACVSTEQVVRSDRLMKWKEFMSDHLGRTPEYIKRLEATHIDPLHNGNFQGRLEYGD 60 Query: 60 LGEASLCRVRNDACRYVRQPAQ---TQDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWS 116 LG+ CR+ A RY R ++ DTP M++LQ G S F QGQ+ + P D Sbjct: 61 LGQLRFCRMTASAHRYSRHLSKALDVVDTP--RMLILQVAGVSHFEQGQQSSTVAPDDML 118 Query: 117 LYDTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSFGRTGIERMVREQISSAF 176 L D FS+ S EH +LL +A L T L+ GR G+ RM+ IS A+ Sbjct: 119 LVDCGKPFSVTSTQGCEHFILLFQGAAGQLTQTGDMHLS----GRNGLGRMLMHLISDAY 174 Query: 177 RECHAMPLRTGNVVANSILQLVVSALEASSENP---GGAAMGLRQRIVQFIDEHLSDEHL 233 + + ++ ++ +SI L+ +AL+ + + R+ +I+ HL+D L Sbjct: 175 HQYPLLNSQSAGLIGDSIAGLLNNALKNKQDEKQLDHDFRFFKQNRLKAYIERHLADRDL 234 Query: 234 TVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIAFR 293 ++ RIA A S R +HR F DE G +V++Y+WQRRL++ DL++ EQ ++TEIA+ Sbjct: 235 SIERIANAEQCSVRSLHRAFQDELGCSVSEYIWQRRLSRCAEDLRNREQTHRSLTEIAYA 294 Query: 294 WGFSNAAHFSHAFKQAYGLSPRECRVAA 321 WG+ +++HFS FK +G+SPR R A Sbjct: 295 WGYGSSSHFSRHFKSTFGMSPRLFRETA 322 >ref|YP_004474108.1| AraC family transcriptional regulator [Pseudomonas fulva 12-X] gb|AEF22014.1| transcriptional regulator, AraC family [Pseudomonas fulva 12-X] Length = 328 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 112/330 (33%), Positives = 173/330 (52%), Gaps = 17/330 (5%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDLAASGIS-FSPGDSLGFRGCIEYGD 59 MS LA V TD AQ+ R W+ ++S ++ + P+ + S F F G +EYG Sbjct: 1 MSTLASVSTDPYAQSDRLLKWREFMSNHLGQTPEHVRRLETSYFEALHDQPFTGRLEYGA 60 Query: 60 LGEASLCRVRNDACRYVRQPAQT---QDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWS 116 LGE C + R+ R ++T +TP +++LQ S F QG ++ VL PG+ Sbjct: 61 LGELHFCHMVCSPHRFTRSLSKTLAPAETPW--LVILQMSEISHFEQGNKRHVLTPGEIL 118 Query: 117 LYDTSHAFSIASEGESEHLVLL-HPRSAEPLLLTELGQLAARSFG-RTGIERMVREQISS 174 L D F++ S E+L+LL H L + +G + R G+ RM++ IS Sbjct: 119 LLDCGQPFNVTSMKGCEYLMLLCHG------LGSRVGTVPEPHLNSRNGLVRMLQHMISD 172 Query: 175 AFRECHAMPLRTGNVVANSILQLVVSALEASSENPG---GAAMGLRQRIVQFIDEHLSDE 231 + + M T +++ SI L+ + LE + + RI FI+++L+D Sbjct: 173 TYHQFPLMNATTASLLGQSITSLLQNTLENQRQQTHLERDFHFFKKSRIRSFIEQNLTDR 232 Query: 232 HLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIA 291 LT+ RIAEA S R +HR F DET + +Y+WQRRLA+ +L+ E +IT+IA Sbjct: 233 ELTIERIAEALECSVRTLHRAFKDETTSGLNEYIWQRRLARCAEELRKPENLPRSITDIA 292 Query: 292 FRWGFSNAAHFSHAFKQAYGLSPRECRVAA 321 + WGFS+++HFS AF+ YG+ PR R +A Sbjct: 293 YAWGFSSSSHFSKAFRAMYGMPPRLFRESA 322 >ref|YP_984051.1| helix-turn-helix domain-containing protein [Polaromonas naphthalenivorans CJ2] gb|ABM39130.1| transcriptional regulator, AraC family [Polaromonas naphthalenivorans CJ2] Length = 340 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 162/330 (49%), Gaps = 24/330 (7%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDLAASGISFSPGDSLGFRGCIEYGDL 60 M ++ TDD+A R+ W+ W+S DL GDS+ F G I Sbjct: 1 MPNSQILSTDDLASTERALAWEHWMSGLFGGLDSDLY--------GDSV-FDGHIATSHA 51 Query: 61 GEASLCRVRNDACRYVRQP--AQTQDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWSLY 118 G+ + R+ + R +R P A+T D I+ +G + Q RQ +RPG W++Y Sbjct: 52 GDVVMTRLEANRHRVMRSPGLARTSDM-SYLKIIAPWQGNAALEQQGRQTWVRPGGWAIY 110 Query: 119 DTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSFGR-----TGIERMVREQIS 173 DT+ ++ +A+ S HL+++ PR LTE G GR +GI R+ E + Sbjct: 111 DTTGSYEVANPERSLHLIVMLPREQ----LTERGLRIDALMGRLVGGSSGISRVALETMR 166 Query: 174 SAFRECHAMPLRTGNVVANSILQLVVSALE--ASSENPGGAAMGLRQRIVQFIDEHLSDE 231 S F+E M + ++ LV +L+ A L+ RI FI +HL D Sbjct: 167 SIFQELPLMTPEAARGAGDLVIDLVRLSLQELAGRTTATTQQEALKDRIRDFIGQHLRDP 226 Query: 232 HLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIA 291 L++ RIA+ S R +H F+DE T+ Y+ +RRL +RDL++ TIT+IA Sbjct: 227 DLSLDRIAQVLNCSKRHLHNAFADEED-TLGHYILRRRLQACMRDLKNPVHLPRTITDIA 285 Query: 292 FRWGFSNAAHFSHAFKQAYGLSPRECRVAA 321 F WGF+N HFS F++ GLSP E R AA Sbjct: 286 FSWGFNNGTHFSRVFREHAGLSPSEFRRAA 315 >ref|ZP_03588608.1| transcriptional activator FeaR [Burkholderia multivorans CGD1] gb|EED96959.1| transcriptional activator FeaR [Burkholderia multivorans CGD1] Length = 330 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 144/313 (46%), Gaps = 12/313 (3%) Query: 12 IAQAHRSQVWKAWLSTYVARDPDDLAASGISFSPGDSLGFRGCIEYGDLGEASLCRVRND 71 + + + W +S VA P + F P + F G I G +G A RV Sbjct: 10 VTSSSERRAWPDLISDLVAGSPPERNRQSCEFEPIGTTPFSGSITCGAVGAARFARVAAT 69 Query: 72 ACRYVRQPAQTQDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWSLYDTSHAFSIASEGE 131 Y QP D + LQT G S+ G RQ L PG+W+++D F+I+S+ Sbjct: 70 PSVYRGQPRLGSDI-APLFVALQTHGDSLLGDGVRQIRLLPGEWTVFDARCPFTISSQHC 128 Query: 132 SEHLVLLHP------RSAEPLLLTELGQLAARSFGRTGIERMVREQISSAFRECHAMPLR 185 E + + P +PL+ G +G RM + + S FRE + Sbjct: 129 MELIFVNVPGLIPAQPPRQPLIYPTF-----EPSGTSGSARMFSDLVVSLFRELENVDSN 183 Query: 186 TGNVVANSILQLVVSALEASSENPGGAAMGLRQRIVQFIDEHLSDEHLTVARIAEAFGYS 245 + + L A P R+ ++QFI+EHLSD L+ IA A G S Sbjct: 184 IAISSVDLLRNLFSDAFRIQCPWPAQPLETQRRAVLQFIEEHLSDPELSPPSIASALGMS 243 Query: 246 SRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTITEIAFRWGFSNAAHFSHA 305 RQ+HR+F TV +Y+W+RR+ + +L+ A ++T IAFRWGFS++ HFS A Sbjct: 244 IRQVHRLFKRAGSQTVGEYIWKRRIQRCSEELRSGANAALSVTTIAFRWGFSSSPHFSRA 303 Query: 306 FKQAYGLSPRECR 318 FK+ G++P E R Sbjct: 304 FKKEMGMTPSEYR 316 >ref|YP_980847.1| helix-turn-helix domain-containing protein [Polaromonas naphthalenivorans CJ2] gb|ABM35926.1| transcriptional regulator, AraC family [Polaromonas naphthalenivorans CJ2] Length = 348 Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 103/331 (31%), Positives = 168/331 (50%), Gaps = 22/331 (6%) Query: 1 MSRLAVVLTDDIAQAHRSQVWKAWLSTYVARDPDDL-AASGISFSPGDSLGFRGCIEYGD 59 MSR L D A + +W+ + T + R P +L I P + F G I+YGD Sbjct: 2 MSRSMASL-DGCISASSALMWEDAVHTGIGRMPAELRHQEVIHLLPVGAQAFSGRIDYGD 60 Query: 60 LGEASLCRVRNDACRY---VRQPAQTQDTPGAAMIVLQTRGTSVFRQGQRQDVLRPGDWS 116 L LCR+ R+ +R+ A +P ++V+Q + +S F Q +R +L PGDW Sbjct: 61 LAGTGLCRMTASPHRFQRALREGASLAASP--LILVIQVKNSSYFEQRERSGMLSPGDWC 118 Query: 117 LYDTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSF-----GRTGIERMVREQ 171 + DT F S E +++ R A+ + LG L AR G+TG R+++ Sbjct: 119 VLDTYRPFGWNSASGCEQIIMTIQRPAD----SGLGDLIARGAAQRCDGKTGAARILQAM 174 Query: 172 ISSAFRECHAMPLRTGNVVANSILQLVVSALEASSENPGGAAMGLR----QRIVQFIDEH 227 +S + H + + +A+++ +AL+ E P A + LR R+ +I+ Sbjct: 175 VSEVMGQIHHLAPYSAGSLASALTATAWNALQEQLEAP--APILLRDTQCSRLKAWIETR 232 Query: 228 LSDEHLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQAGCTI 287 L++ L+V IA+ S+R +HR FS + +V+ YLWQRR+ Q L++ ++ +I Sbjct: 233 LAEPDLSVDTIAQGCRMSARSVHRAFSSDPTGSVSSYLWQRRVVQCAAALKNPQEMHRSI 292 Query: 288 TEIAFRWGFSNAAHFSHAFKQAYGLSPRECR 318 T+IA WGFS+++HFS F+ G+SPR R Sbjct: 293 TDIALSWGFSSSSHFSRVFRSTLGVSPRSYR 323 >ref|YP_001833589.1| AraC family transcriptional regulator [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB96100.1| transcriptional regulator, AraC family [Beijerinckia indica subsp. indica ATCC 9039] Length = 316 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 21/271 (7%) Query: 56 EYGDLGEASLCRVRNDACRYVRQPAQ--TQDTPGAAMIVLQTRGTSVFRQGQRQDVLRPG 113 Y D LC+++ R V P Q + QT+GTS+F QGQ + VL PG Sbjct: 48 NYVDFDGLRLCQIKTSGHR-VALPRSWLGQSEHPVVKVHFQTKGTSIFEQGQTRIVLSPG 106 Query: 114 DWSLYDTSHAFSIASEGESEHLVLLHPRSAEPLLLTELGQLAARSFGRT------GIERM 167 D YD + I+S +EH V + P+ + L E ++AAR F G R Sbjct: 107 DCLAYDVAQPHLISSLEYTEHEVAIIPKKS----LME-RRIAARQFPAVHMSTEHGDIRF 161 Query: 168 VREQISSAFRECHAMPLRTGNVVANSILQLVVSALEASSENPGGAAMG----LRQRIVQF 223 VR + SA R+ + ++ +A+++L +++ L S P G + LR R + Sbjct: 162 VRNFLLSALRQASTLSNKSIKPIADALLDVLIIPL--SEGRPQGVSSDRRETLRIRAQDY 219 Query: 224 IDEHLSDEHLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSLRDLQDSEQA 283 I ++L D LT+ RIA A G S R +H +F DE G+TV++++W RL + DL+D+ Q+ Sbjct: 220 IRQNLGDTDLTIDRIARALGCSKRYLHMIFMDE-GITVSRFIWNERLDRCFYDLKDAHQS 278 Query: 284 GCTITEIAFRWGFSNAAHFSHAFKQAYGLSP 314 TITE+A WGFS+ +HFS +FK YG +P Sbjct: 279 NKTITEVAIEWGFSSPSHFSRSFKDRYGFTP 309 >ref|ZP_02361029.1| putative transcriptional regulator [Burkholderia oklahomensis EO147] ref|ZP_02361092.1| putative transcriptional regulator [Burkholderia oklahomensis C6786] Length = 319 Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 142/282 (50%), Gaps = 16/282 (5%) Query: 50 GFRGCIEYGDLGEASLCRVRNDACRY--VRQPAQTQDTPGAAM---------IVLQTRGT 98 G C + GD +A L + R + PA P AA+ ++LQ G Sbjct: 31 GLDACCDDGDAFDAQLGQYEIGPMRVFTIAAPAHRIVRPVAALHDHGSDYFKLILQLSGE 90 Query: 99 SVFRQGQRQDVLRPGDWSLYDTSHAFSIASEGESEHLVLLHPRSA-EPLLLTELGQLAAR 157 S Q + LR GDWSLYD +SIA+ E L + PR + +L AR Sbjct: 91 SEIEQRGKVFRLRTGDWSLYDPRVPYSIANLTHVEQLAIQIPRKQLGGFAVPDLHTSDAR 150 Query: 158 SFGRTGIERMVREQISSAFRECHAMPLRTGNVVANSILQLVVSALEASSENPGG---AAM 214 F G+ ++ + S + ++P TG ++ +IL L+VS L A + G Sbjct: 151 EFELKGLFSLLSSFLMSLSEQLPSLPGTTGTALSETILGLIVSTLTAQHDVQGTHMTLPA 210 Query: 215 GLRQRIVQFIDEHLSDEHLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSL 274 LR R+ Q+I HL+D L++ RIA S R +HR+F +E G+T+ +Y+W RL + Sbjct: 211 VLRMRVKQYIQGHLADADLSIDRIARELRCSKRYLHRIFEEE-GVTIDRYIWSNRLERCK 269 Query: 275 RDLQDSEQAGCTITEIAFRWGFSNAAHFSHAFKQAYGLSPRE 316 L ++ A I+EIAF WGFS++AHF +FKQ YG++PRE Sbjct: 270 EALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPRE 311 >ref|YP_440604.1| AraC family transcriptional regulator [Burkholderia thailandensis E264] ref|ZP_02386030.1| transcriptional regulator, AraC family protein [Burkholderia thailandensis Bt4] gb|ABC37613.1| transcriptional regulator, AraC family [Burkholderia thailandensis E264] Length = 319 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 141/282 (50%), Gaps = 16/282 (5%) Query: 50 GFRGCIEYGDLGEASLCRVRNDACRY--VRQPAQTQDTPGAAM---------IVLQTRGT 98 G C + D+ +A L + R + PA P AA+ ++LQ G Sbjct: 31 GLDACCDSDDVFDAQLSQYEIGPMRVFTIAAPAHRIVRPVAALHDHGSDFFKLILQLSGV 90 Query: 99 SVFRQGQRQDVLRPGDWSLYDTSHAFSIASEGESEHLVLLHPR-SAEPLLLTELGQLAAR 157 S Q + LR GDWSLYD +SIA+ E L + PR + +L R Sbjct: 91 SEIEQRGKVFRLRTGDWSLYDPRVPYSIANLTRVEQLAIQIPRRQLGGFAVPDLHTSDVR 150 Query: 158 SFGRTGIERMVREQISSAFRECHAMPLRTGNVVANSILQLVVSALEASSENPGGAAM--- 214 F G+ ++ + S + ++P TG ++ +IL L+VS L A + G Sbjct: 151 EFELKGLFSLLSSFLMSLSEQLPSLPGTTGAALSETILGLIVSTLTAQRDAQGAHVALPA 210 Query: 215 GLRQRIVQFIDEHLSDEHLTVARIAEAFGYSSRQIHRMFSDETGMTVAQYLWQRRLAQSL 274 LR R+ Q+I HL+D L++ RIA S R +HR+F +E G+T+ +Y+W RL + Sbjct: 211 VLRMRVKQYIRGHLADADLSIDRIARELRCSKRYLHRIFEEE-GVTIDRYIWSSRLERCK 269 Query: 275 RDLQDSEQAGCTITEIAFRWGFSNAAHFSHAFKQAYGLSPRE 316 L ++ A I+EIAF WGFS++AHF +FKQ YG++PRE Sbjct: 270 DALDNARAAKPAISEIAFSWGFSSSAHFCRSFKQRYGMTPRE 311