BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0118.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004230836.1| Ureidoglycolate lyase [Burkholderia sp. CCGE... 372 e-101 ref|YP_004354993.1| ureidoglycolate lyase [Pseudomonas brassicac... 363 1e-98 ref|YP_299996.1| 5-carboxymethyl-2-hydroxymuconate delta-isomera... 361 4e-98 ref|YP_002873658.1| putative dioxygenase [Pseudomonas fluorescen... 357 6e-97 ref|YP_004474113.1| Ureidoglycolate lyase [Pseudomonas fulva 12-... 350 1e-94 ref|YP_001207030.1| putative bifunctional enzyme with isomerase/... 302 2e-80 ref|ZP_06845150.1| fumarylacetoacetate (FAA) hydrolase [Burkhold... 299 2e-79 ref|YP_001523685.1| 2-keto-4-pentenoate hydratase [Azorhizobium ... 299 2e-79 ref|YP_001241452.1| putative enzyme with isomerase/decarboxylase... 298 3e-79 ref|NP_771925.1| hypothetical protein blr5285 [Bradyrhizobium ja... 295 2e-78 >ref|YP_004230836.1| Ureidoglycolate lyase [Burkholderia sp. CCGE1001] gb|ADX57776.1| Ureidoglycolate lyase [Burkholderia sp. CCGE1001] Length = 284 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/219 (80%), Positives = 188/219 (85%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V+ LPV+PDP+KILCVGINY++HVKETGRE+P PM F RFADSQT H PI+RP AS K Sbjct: 64 VELLPVVPDPDKILCVGINYMTHVKETGREIPTKPMFFTRFADSQTAHDAPIVRPLASHK 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAVVIGR ARHVKAA A DYVAGY+CYNDGSVRDWQ+HTIQF PGKNFP TG F Sbjct: 124 LDFEGELAVVIGRTARHVKAANAFDYVAGYSCYNDGSVRDWQRHTIQFTPGKNFPSTGSF 183 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE GDPSQLSLVTRLNG VVQ+A DLIF IP LIEYCSTFT L PGDVIIT Sbjct: 184 GPWLVTADEVGDPSQLSLVTRLNGEVVQQASLSDLIFDIPTLIEYCSTFTVLRPGDVIIT 243 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GTTGGVGAFREPPLWMKPGD+VEVEIS +G L N IA E Sbjct: 244 GTTGGVGAFREPPLWMKPGDIVEVEISKVGVLRNTIADE 282 >ref|YP_004354993.1| ureidoglycolate lyase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69989.1| putative ureidoglycolate lyase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 283 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 168/219 (76%), Positives = 187/219 (85%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V FLPVIP+P K+LC+GINY +HV+ETGRE+P +PMIF RFADSQT HLQPI+RP AS K Sbjct: 64 VTFLPVIPNPGKVLCIGINYATHVRETGREMPTYPMIFTRFADSQTAHLQPIVRPTASHK 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAVVIG+ ARHVK A+ALDYVAGYACYNDGSVRDWQKHTIQF+PGKNFP TGGF Sbjct: 124 LDFEGELAVVIGKAARHVKPADALDYVAGYACYNDGSVRDWQKHTIQFVPGKNFPNTGGF 183 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE GDP L L TRLNG V+Q RT D+IF + LIEYCSTFTEL PGDVI+T Sbjct: 184 GPWLVTGDEIGDPQDLELTTRLNGEVMQHTRTSDMIFDVRQLIEYCSTFTELAPGDVIVT 243 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GTTGGVGAFREPP+WMKPGD VE+EI+ +G L N I E Sbjct: 244 GTTGGVGAFREPPVWMKPGDEVEIEIARIGTLRNSIVDE 282 >ref|YP_299996.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Ralstonia eutropha JMP134] gb|AAZ65152.1| 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Ralstonia eutropha JMP134] Length = 282 Score = 361 bits (927), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 172/219 (78%), Positives = 182/219 (83%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V+ +PVIPDP KILCVGINY SHVKETGRE+PK+PM F RFADSQ H QPIIRP AS K Sbjct: 64 VRLMPVIPDPAKILCVGINYASHVKETGREMPKYPMFFTRFADSQVAHDQPIIRPRASQK 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAVVIGR ARHV +AL+YVAGY+CYNDGSVRDWQKHTIQF PGKNFPQTG Sbjct: 124 LDFEGELAVVIGRTARHVPGEQALNYVAGYSCYNDGSVRDWQKHTIQFTPGKNFPQTGAL 183 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE DPS LSL TRLNG VVQ A TDDLIF + +I YCSTFTEL GDVIIT Sbjct: 184 GPWLVTTDEIRDPSALSLTTRLNGEVVQAATTDDLIFSVSEVIAYCSTFTELRAGDVIIT 243 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GTTGGVGAFREPPLWMKPGDVVEVEIS +G L N I E Sbjct: 244 GTTGGVGAFREPPLWMKPGDVVEVEISKIGVLRNTIQDE 282 >ref|YP_002873658.1| putative dioxygenase [Pseudomonas fluorescens SBW25] emb|CAY50574.1| putative dioxygenase [Pseudomonas fluorescens SBW25] Length = 283 Score = 357 bits (916), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 165/219 (75%), Positives = 184/219 (84%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V FLPVI +P K+LC+GINY +HV+ETGR++P +PMIF RFADSQ HLQPIIRP S K Sbjct: 64 VTFLPVIANPGKVLCIGINYATHVRETGRDMPTYPMIFTRFADSQVAHLQPIIRPKVSHK 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAVVI + ARHV AA+ALDYVAGYACYNDGSVRDWQKHT+QF+PGKNFP TGGF Sbjct: 124 LDFEGELAVVISKTARHVNAADALDYVAGYACYNDGSVRDWQKHTLQFVPGKNFPHTGGF 183 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE DP L L TRLNG V+Q RT D+IF + LIEYCSTFTEL PGDVI++ Sbjct: 184 GPWLVTRDEISDPQNLELTTRLNGEVMQHTRTSDMIFDVRQLIEYCSTFTELAPGDVIVS 243 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GTTGGVGAFREPP+WMKPGD VEVEISG+G L N IA E Sbjct: 244 GTTGGVGAFREPPVWMKPGDTVEVEISGIGLLRNSIADE 282 >ref|YP_004474113.1| Ureidoglycolate lyase [Pseudomonas fulva 12-X] gb|AEF22019.1| Ureidoglycolate lyase [Pseudomonas fulva 12-X] Length = 282 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 162/219 (73%), Positives = 183/219 (83%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 +QFLPVI P KILC+GINY +H++ETGRE P +PMIF RFADSQT H QPI+RP AS K Sbjct: 64 IQFLPVITHPGKILCIGINYATHMRETGRETPVYPMIFTRFADSQTAHEQPILRPKASHK 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAVVIG+ ARHVK A+ALDYVAGY+CYNDGSVRDWQKHTIQF+PGKNFPQTGGF Sbjct: 124 LDFEGELAVVIGKTARHVKEADALDYVAGYSCYNDGSVRDWQKHTIQFVPGKNFPQTGGF 183 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE DP L L TRLNG ++Q T D+IF + LIEYC+ FTEL PGDVI++ Sbjct: 184 GPWLVTADEIPDPQTLELTTRLNGEIMQHTSTADMIFDVRKLIEYCTAFTELAPGDVIVS 243 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GTTGGVGAFREP +WMKPGDVVEVEI+ +G L N IA E Sbjct: 244 GTTGGVGAFREPQVWMKPGDVVEVEIASIGILRNTIADE 282 >ref|YP_001207030.1| putative bifunctional enzyme with isomerase/decarboxylase activity [Bradyrhizobium sp. ORS 278] emb|CAL78813.1| putative bifunctional enzyme with isomerase/decarboxylase activity [Includes:5-carboxymethyl-2-hydroxymuconate delta-isomerase/ 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase] [Bradyrhizobium sp. ORS 278] Length = 283 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/220 (65%), Positives = 168/220 (76%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 + FLPVIP+P+KILC+G+NY +H KETGR ++P +F RFA+SQTGHL IIRP S Sbjct: 63 ITFLPVIPNPDKILCIGLNYETHRKETGRSEVENPTVFGRFANSQTGHLSNIIRPRVSTD 122 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELA+VIG+ R++ AEA ++AGYACYN+GSVRD+Q+HT QF PGKNFP TG F Sbjct: 123 LDFEGELAIVIGKPGRYIPRAEAFQHIAGYACYNEGSVRDFQRHTHQFTPGKNFPDTGAF 182 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE D L L TRLNG VVQEA +IF IP IEYCS+FT L PGDVI T Sbjct: 183 GPWLVTSDEIDDLGPLKLQTRLNGEVVQEATISQMIFDIPRQIEYCSSFTRLEPGDVIAT 242 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQEA 220 GT GGVG+ R PPLWMKPGDVVEVEI +G L N IA EA Sbjct: 243 GTPGGVGSRRTPPLWMKPGDVVEVEIDKIGLLRNGIADEA 282 >ref|ZP_06845150.1| fumarylacetoacetate (FAA) hydrolase [Burkholderia sp. Ch1-1] gb|EFG67215.1| fumarylacetoacetate (FAA) hydrolase [Burkholderia sp. Ch1-1] Length = 276 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 151/222 (68%), Positives = 166/222 (74%), Gaps = 13/222 (5%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V+ LPVIPDP+KILCVGINYLSHVKETGRE+P PMIFARFADSQT H PI+RP S++ Sbjct: 64 VELLPVIPDPQKILCVGINYLSHVKETGREVPDKPMIFARFADSQTAHDAPIVRPSVSER 123 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDG---SVRDWQKHTIQFIPGKNFPQT 117 LDFEGELAVVIGR+A G C + ++ QF PGKNFPQT Sbjct: 124 LDFEGELAVVIGRRASR----------EGGGCIRRDRRLCLLQRRQRASQFTPGKNFPQT 173 Query: 118 GGFGPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDV 177 GGFGPWLVT DE GDPS+LSL TRLNG V+ A TDDLIFPIP LIEYCSTF L PGD Sbjct: 174 GGFGPWLVTRDEVGDPSRLSLTTRLNGEVMPRATTDDLIFPIPQLIEYCSTFCTLLPGDG 233 Query: 178 IITGTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 IITGTTGGVGAFR+PPLWMK GDVVEVEIS +G L N +A E Sbjct: 234 IITGTTGGVGAFRDPPLWMKAGDVVEVEISRIGTLRNQVADE 275 >ref|YP_001523685.1| 2-keto-4-pentenoate hydratase [Azorhizobium caulinodans ORS 571] dbj|BAF86767.1| 2-keto-4-pentenoate hydratase [Azorhizobium caulinodans ORS 571] Length = 298 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 138/220 (62%), Positives = 167/220 (75%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 + +LPVIPD K+LC+G+NY H ETGR + +HP +F RFADSQ GHL IIRP S Sbjct: 79 ITWLPVIPDSNKVLCIGLNYEMHRLETGRAVVEHPTVFTRFADSQIGHLAHIIRPRVSQH 138 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELA++IG+ R++ A ++AGY+CYN+GS+RD+Q+HT QF PGKNFP TG F Sbjct: 139 LDFEGELAIIIGKPGRYITRENAWSHIAGYSCYNEGSIRDFQRHTHQFAPGKNFPGTGAF 198 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPW++TPDEAGD + + L TRLNG VVQEA +IF IP IEYCSTFT L PGDVI+T Sbjct: 199 GPWMMTPDEAGDITTMKLETRLNGTVVQEALISQMIFDIPCQIEYCSTFTNLEPGDVIVT 258 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQEA 220 GT GGVGA R PPLWMKPGD+VEVEI +G L N +A EA Sbjct: 259 GTPGGVGAKRTPPLWMKPGDIVEVEIDRVGILRNGVADEA 298 >ref|YP_001241452.1| putative enzyme with isomerase/decarboxylase activity [Bradyrhizobium sp. BTAi1] gb|ABQ37546.1| putative enzyme with isomerase/decarboxylase activity [Bradyrhizobium sp. BTAi1] Length = 283 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 142/219 (64%), Positives = 168/219 (76%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 + FLPVIP+P+KILC+G+NY +H KETGR ++P +F RFA+SQTGHL+ IIRP S Sbjct: 63 ITFLPVIPNPDKILCIGLNYETHRKETGRSEVENPTVFGRFANSQTGHLRNIIRPRVSTD 122 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 LDFEGELAV+IG+ R++ +EA ++AGYACYN+GSVRD+Q+HT QF PGKNFP TG F Sbjct: 123 LDFEGELAVIIGKPGRYIPRSEAFQHIAGYACYNEGSVRDFQRHTHQFTPGKNFPDTGAF 182 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPW+VT DE D L L TRLNG VVQEA +IF IP IEYCS+FT L PGDVI T Sbjct: 183 GPWMVTSDEIDDLGPLKLQTRLNGEVVQEATISQMIFDIPRQIEYCSSFTRLEPGDVIAT 242 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GT GGVG+ R PPLWMKPGDVVEVEI +G L N IA E Sbjct: 243 GTPGGVGSRRTPPLWMKPGDVVEVEIDRIGLLRNGIADE 281 >ref|NP_771925.1| hypothetical protein blr5285 [Bradyrhizobium japonicum USDA 110] dbj|BAC50550.1| blr5285 [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 139/219 (63%), Positives = 166/219 (75%) Query: 1 VQFLPVIPDPEKILCVGINYLSHVKETGRELPKHPMIFARFADSQTGHLQPIIRPHASDK 60 V F PVIPDP KI+CVG+NY HV ETGR + + P +F RF SQ GHLQPI++P SD Sbjct: 63 VSFAPVIPDPGKIICVGLNYRDHVAETGRIVTEKPALFVRFPCSQVGHLQPIVKPKVSDD 122 Query: 61 LDFEGELAVVIGRKARHVKAAEALDYVAGYACYNDGSVRDWQKHTIQFIPGKNFPQTGGF 120 D+EGELA+VIG++ RH+ A ALD++AGY+CYN+GSVRDWQ+HT QF+ GK F ++G F Sbjct: 123 FDYEGELALVIGKEGRHIPANRALDHIAGYSCYNEGSVRDWQRHTSQFLSGKTFAESGSF 182 Query: 121 GPWLVTPDEAGDPSQLSLVTRLNGAVVQEARTDDLIFPIPALIEYCSTFTELHPGDVIIT 180 GPWLVT DE DPS+L+L TRLNG VVQ+ TD LI IP LI Y ST L PGDVI+T Sbjct: 183 GPWLVTADEIPDPSKLTLQTRLNGTVVQDTTTDLLITAIPGLIAYISTICPLVPGDVIVT 242 Query: 181 GTTGGVGAFREPPLWMKPGDVVEVEISGLGKLVNPIAQE 219 GT GGVGA R PPLWM+PGD VEVEISG+G L N + E Sbjct: 243 GTPGGVGAKRTPPLWMRPGDTVEVEISGIGTLRNKVIAE 281