BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0109.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774888.1| hypothetical protein Hsero_1464 [Herbaspiril... 518 e-145 ref|YP_003775095.1| hypothetical protein Hsero_1674 [Herbaspiril... 225 4e-57 ref|XP_002540334.1| conserved hypothetical protein [Ricinus comm... 176 3e-42 ref|YP_003776310.1| hypothetical protein Hsero_2913 [Herbaspiril... 156 2e-36 ref|YP_368342.1| hypothetical protein Bcep18194_A4101 [Burkholde... 116 4e-24 ref|YP_001896404.1| hypothetical protein Bphyt_2786 [Burkholderi... 114 1e-23 gb|EGD02705.1| hypothetical protein B1M_20156 [Burkholderia sp. ... 99 6e-19 gb|EGH87170.1| hypothetical protein PLA107_28870 [Pseudomonas sy... 94 2e-17 gb|EGH55137.1| hypothetical protein PSYCIT7_26675 [Pseudomonas s... 94 3e-17 ref|ZP_06493028.1| hypothetical protein PsyrpsF_02781 [Pseudomon... 93 3e-17 >ref|YP_003774888.1| hypothetical protein Hsero_1464 [Herbaspirillum seropedicae SmR1] gb|ADJ62980.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 254 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 252/254 (99%), Positives = 252/254 (99%) Query: 1 MPETIEITPNQSGKALLARYPHQIKLLNRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIK 60 MPETIEITPNQSGKALLARYPHQIKLLNRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIK Sbjct: 1 MPETIEITPNQSGKALLARYPHQIKLLNRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIK 60 Query: 61 DVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLALLQEIRKAGWQRYVGR 120 DVLGISGSDDPNFASEDIVEWHVYA LATEEEIPHDLARQRFLALLQEIRKAGWQRYVGR Sbjct: 61 DVLGISGSDDPNFASEDIVEWHVYAGLATEEEIPHDLARQRFLALLQEIRKAGWQRYVGR 120 Query: 121 GHPRLKGSTALRYALSSRTYALDPDYPLSLQEWMSMPDDTMWRFQLENAYLMLTLTRDPQ 180 GHPRLKGSTALRYALSSRTYALDPDYPLSLQEWMSMPDDTMWRFQLENAYLMLTLTRDPQ Sbjct: 121 GHPRLKGSTALRYALSSRTYALDPDYPLSLQEWMSMPDDTMWRFQLENAYLMLTLTRDPQ 180 Query: 181 RKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQAALPEELKSLKQDRERAEQVLRQQ 240 RKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQAALPEELK LKQDRERAEQVLRQQ Sbjct: 181 RKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQAALPEELKLLKQDRERAEQVLRQQ 240 Query: 241 GVAIDESYQDPKLP 254 GVAIDESYQDPKLP Sbjct: 241 GVAIDESYQDPKLP 254 >ref|YP_003775095.1| hypothetical protein Hsero_1674 [Herbaspirillum seropedicae SmR1] gb|ADJ63187.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 108/255 (42%), Positives = 156/255 (61%), Gaps = 1/255 (0%) Query: 1 MPETIEITPNQSGKALLARYPHQIKLLNRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIK 60 M +EI NQSG L+ +YP Q ++ P + FY+ DW G+V + T H + Sbjct: 1 MTAPVEIRVNQSGVDLVKKYPDQFEITKYPQGIQFYAADWGSVPNGSVVLATSAHNVTLP 60 Query: 61 DVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLALLQEIRKAGWQRYVGR 120 +L +G+DDPNFASE+I+ W++ A + + I HD AR+RF LLQ +R AGW R + Sbjct: 61 YILSATGNDDPNFASENIINWNINAGITEADVIAHDDARKRFFGLLQSLRNAGWVRAIRL 120 Query: 121 GHPRLKGSTALRYALSSR-TYALDPDYPLSLQEWMSMPDDTMWRFQLENAYLMLTLTRDP 179 PRLKG AL Y Y+LDPDY LSL++WM++ W ++AYL +++TRDP Sbjct: 121 SEPRLKGKQALDYRQKENPIYSLDPDYVLSLEQWMTLDTRATWSLYSDHAYLDVSITRDP 180 Query: 180 QRKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQAALPEELKSLKQDRERAEQVLRQ 239 + DV K GAYFV+ +L NE+ R +VGP +R W+ LP L L + R+ AE+ L++ Sbjct: 181 SKTDVTKPGAYFVEYALKSDNEKWRSVVGPTKRLHWKTELPAVLPQLAKSRQAAEETLKK 240 Query: 240 QGVAIDESYQDPKLP 254 + + IDE+Y+DP LP Sbjct: 241 ENITIDETYRDPPLP 255 >ref|XP_002540334.1| conserved hypothetical protein [Ricinus communis] gb|EEF22049.1| conserved hypothetical protein [Ricinus communis] Length = 228 Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 88/225 (39%), Positives = 131/225 (58%), Gaps = 1/225 (0%) Query: 31 PNVNFYSLDWPRNALGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASLATE 90 P VNFY+ W + + G+V ++ G I VLG+ G ++ ++E +V++ ++A + Sbjct: 2 PGVNFYTAQWAQQSPGSVTIQPGKFQFTIPYVLGLQGVEESRASAEGLVQYEIFAGITGP 61 Query: 91 EEIPHDLARQRFLALLQEIRKAGWQRYVGRGHPRLKGSTALRYAL-SSRTYALDPDYPLS 149 + I HD ARQ+F ALLQ IRKAGW ++ R PR++G L Y L SS +LDPDY + Sbjct: 62 DLIGHDEARQKFFALLQGIRKAGWTPFIDRDDPRIRGRQRLEYVLKSSSASSLDPDYEPT 121 Query: 150 LQEWMSMPDDTMWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRIVGP 209 L EWM + D + W F ++AYL + R+ +D +K GAY + +L N+ R V P Sbjct: 122 LTEWMQLEDLSRWTFYADHAYLSVAFKREASLRDPDKPGAYLLTYTLMSENQHFRTYVAP 181 Query: 210 ARRADWQAALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKLP 254 R W+ LP LK L+ R++AE+ R +G +IDE Y DP P Sbjct: 182 KDRDRWKELLPATLKELQAQRQQAEKAWRSKGASIDEGYVDPPAP 226 >ref|YP_003776310.1| hypothetical protein Hsero_2913 [Herbaspirillum seropedicae SmR1] gb|ADJ64402.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 284 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 1/255 (0%) Query: 1 MPETIEITPNQSGKALLARYPHQIKLLNRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIK 60 MP +I I N+ KA + + P IK++ +P +NFY + W LG V + G I Sbjct: 28 MPSSIAIRANEPSKAFIDQAPSAIKVIKQPAGINFYLMQWGGAQLGDVHIHHGAASVQIP 87 Query: 61 DVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLALLQEIRKAGWQRYVGR 120 DV + G +D F E I W +Y L++ + H+ AR + A+L + K W+ + Sbjct: 88 DVRVLQGEEDAQFPEEHIANWKIYIGLSSGSVMSHEQARNKIYAILAALEKKAWRVLIDP 147 Query: 121 GHPRLKGSTALRYALS-SRTYALDPDYPLSLQEWMSMPDDTMWRFQLENAYLMLTLTRDP 179 PRL G Y S L+ DY +L EWM + D + W F + +L +T+ RD Sbjct: 148 DDPRLTGKERFDYVTGQSPASGLNIDYVPTLDEWMRLEDLSHWSFYADGVFLTVTMQRDQ 207 Query: 180 QRKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQAALPEELKSLKQDRERAEQVLRQ 239 DV++ G Y + L+L G NE R V P R +W+ LP K+L + R + E Sbjct: 208 GALDVSRPGHYILVLNLMGENEGFRAFVPPKARTNWRNELPSLWKALNERRTQREAQALV 267 Query: 240 QGVAIDESYQDPKLP 254 G I+ SYQDP LP Sbjct: 268 AGKKINTSYQDPPLP 282 >ref|YP_368342.1| hypothetical protein Bcep18194_A4101 [Burkholderia sp. 383] gb|ABB07698.1| hypothetical protein Bcep18194_A4101 [Burkholderia sp. 383] Length = 294 Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 10/232 (4%) Query: 28 NRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASL 87 N P +FY DW R LGTV+ G H V+ +VL GS D + I W++ + Sbjct: 63 NHPSGTSFYQHDWMRGNLGTVKFMQGTHGFVLDNVLSAVGSADKDVPG-GIYTWNINFGV 121 Query: 88 ATEEEIPHDLARQRFLALLQEIRKAGWQRYVGRGHPRLKGSTALRYALSSRTYALDPDYP 147 + E+ H+ A R L Q++R GW RY+ +PRL G A Y + Y+LD Y Sbjct: 122 SPEQADTHEAALARMTKLFQDLRANGWVRYIDVSNPRLTGKQAWDYMKTYSIYSLDSGYT 181 Query: 148 LSLQEWMSMPDDT-MWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRI 206 +++EW + + W F + AYL ++L+ V K Y + + NE A Sbjct: 182 PTIEEWKAAVKEMPRWVFYADGAYLEISLSEKNMGGFVGKT-TYLLTARIR--NEYAFYG 238 Query: 207 VG-----PARRADWQAALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKL 253 +G + +W+ LP EL+ R E L+ QG ID +YQDP + Sbjct: 239 LGYFPGNAEKIRNWKTLLPAELQKYHAKRIATEAALKGQGYTIDTAYQDPPI 290 >ref|YP_001896404.1| hypothetical protein Bphyt_2786 [Burkholderia phytofirmans PsJN] gb|ACD17180.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 304 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/232 (32%), Positives = 110/232 (47%), Gaps = 8/232 (3%) Query: 28 NRPPNVNFYSLDWPRNALGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASL 87 + P FY +W R LGTV+ N +I +VL I D + E I +W++ + Sbjct: 63 DHPTGARFYQREWTRGHLGTVEFVDNNRSLMIDNVLSILAFADKD-VPEGIYKWNISFGV 121 Query: 88 ATEEEIPHDLARQRFLALLQEIRKAGWQRYVGRGHPRLKGSTALRYALS--SRTYALDPD 145 ++E+ H+ AR R L LL ++R GW RY+ G PRL+G A Y S Y+LD + Sbjct: 122 SSEQADTHEAARDRVLKLLAQLRSLGWNRYIDVGDPRLRGRAAWLYGSSFPVAIYSLDSE 181 Query: 146 YPLSLQEWMSM-PDDTMWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNG--ANEE 202 Y + +EW +M D W F + YL ++L V K Y + + + A Sbjct: 182 YAPTQEEWNAMLRHDPRWIFYADGVYLEISLVESNMGGFVGKS-TYLLTVDIKSEYAFYG 240 Query: 203 ARRIVGPARRAD-WQAALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKL 253 G A + W+ LP ELK +R + E L QG ID +YQDP + Sbjct: 241 LGYFPGNAEKIHRWKTLLPAELKKYHAERLKTEAALGSQGYTIDTNYQDPPI 292 >gb|EGD02705.1| hypothetical protein B1M_20156 [Burkholderia sp. TJI49] Length = 225 Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 10/218 (4%) Query: 42 RNALGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQR 101 R LGTV+ + G H +I +VL GS D + I +W + ++ E+ H+ A R Sbjct: 2 RGNLGTVEFEHGKHSFMIDNVLSAIGSADTDVPG-GIYQWSINFGVSPEQADTHEAAMAR 60 Query: 102 FLALLQEIRKAGWQRYVGRGHPRLKGSTALRYALSSRTYALDPDYPLSLQEW-MSMPDDT 160 L +++R GW R + G PRL G A Y+LDPDY ++ EW +++ Sbjct: 61 MAKLFRDLRAKGWIRCIDVGDPRLTGKQAWDRLRVDSVYSLDPDYTPTIDEWKVAIRKMP 120 Query: 161 MWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRIVG-----PARRADW 215 W F + YL ++LT V K Y L+++ NE A +G + +W Sbjct: 121 HWVFYADGVYLDVSLTESNMGGFVGKT-TYL--LTMDIKNEYAFYGLGYFPGNADKIRNW 177 Query: 216 QAALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKL 253 + LP EL+ R E L+ QG +D +YQDP + Sbjct: 178 KTLLPAELQKYHAKRLATEAELKAQGYTVDTAYQDPPI 215 >gb|EGH87170.1| hypothetical protein PLA107_28870 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 288 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 12/218 (5%) Query: 45 LGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLA 104 L TV+V++ + + I++V + +P DI VY + H+ A F Sbjct: 71 LITVKVRSASTILAIENVSSTTVVTNPLGLITDI---DVYVA-GVSTHAKHEDAMAYFYQ 126 Query: 105 LLQEIRKAGWQRYVGRGHPRLKGSTALRYALSSRTYA--------LDPDYPLSLQEWMSM 156 +Q + AGWQRY+ R+ G+ A ++ + +DP+ L+ Q W+S+ Sbjct: 127 QVQNLDAAGWQRYIFPNEARIPGTEAGKFTNLNEVLGKNVGTGPWMDPNLKLTKQVWVSL 186 Query: 157 PDDTMWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQ 216 P W F + YL L + R+ + D +G+Y + +E V RA W+ Sbjct: 187 PMINTWMFYSGHEYLDLMVQRENSKDDPQNRGSYLFTWTFKSESEFYAEFVRGEDRARWR 246 Query: 217 AALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKLP 254 LP EL + ++R++ E L++ G+ IDE+Y+D K P Sbjct: 247 ELLPAELTRMGKERQKTEAQLKKMGIKIDENYKDAKPP 284 >gb|EGH55137.1| hypothetical protein PSYCIT7_26675 [Pseudomonas syringae Cit 7] Length = 288 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 12/218 (5%) Query: 45 LGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLA 104 L TV+V++ + + I++V + +P DI VY + H+ A F Sbjct: 71 LITVKVRSASTILAIENVSSTTIVTNPLGLITDI---DVYVA-GVSTHAKHEDAMAYFYQ 126 Query: 105 LLQEIRKAGWQRYVGRGHPRLKGSTALRYALSSRTYA--------LDPDYPLSLQEWMSM 156 +Q + AGWQRY+ R+ G+ A ++ + +DP+ L+ Q W+S+ Sbjct: 127 QVQNLDAAGWQRYIFPNEARIPGTEADKFTNLNEVLGKNVGTGPWMDPNLKLTKQVWVSL 186 Query: 157 PDDTMWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQ 216 P W F + YL L + R+ + D +G+Y + +E V RA W+ Sbjct: 187 PMINTWMFYSGHEYLDLMVQRENSKDDPQNRGSYLFTWTFKSESEFYAEFVRGEDRARWR 246 Query: 217 AALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKLP 254 LP EL + ++R++ E L++ G+ IDE+Y+D K P Sbjct: 247 ELLPAELTRMGKERQKTEAQLKKMGIKIDENYKDAKPP 284 >ref|ZP_06493028.1| hypothetical protein PsyrpsF_02781 [Pseudomonas syringae pv. syringae FF5] Length = 288 Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 12/218 (5%) Query: 45 LGTVQVKTGNHVAVIKDVLGISGSDDPNFASEDIVEWHVYASLATEEEIPHDLARQRFLA 104 L TV+V++ + + I++V + +P DI VY + H+ A F Sbjct: 71 LITVKVRSASTILAIENVSSTTIVTNPLGLITDI---DVYVA-GVSAHAKHEDAMAYFYQ 126 Query: 105 LLQEIRKAGWQRYVGRGHPRLKGSTALRYALSSRTYA--------LDPDYPLSLQEWMSM 156 +Q + AGWQRY+ R+ G+ A ++ + +DP+ L+ Q W+S+ Sbjct: 127 QVQNLDAAGWQRYIFPNEARIPGTEAGKFTDLNEVLGKNVGTGPWMDPNLKLTKQVWVSL 186 Query: 157 PDDTMWRFQLENAYLMLTLTRDPQRKDVNKKGAYFVKLSLNGANEEARRIVGPARRADWQ 216 P W F + YL L + R+ + D +G+Y + +E V RA W+ Sbjct: 187 PMINTWMFYSGHEYLDLMVQRENSKDDPQNRGSYLFTWTFKSESEFYAEFVRGEDRARWR 246 Query: 217 AALPEELKSLKQDRERAEQVLRQQGVAIDESYQDPKLP 254 LP EL + ++R++ E L++ G+ IDE+Y+D K P Sbjct: 247 ELLPAELTRMGKERQKTEAQLKKMGIKIDENYKDAKPP 284