BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0107.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774883.1| solute binding periplasmic protein [Herbaspi... 516 e-144 ref|ZP_08868496.1| extracellular solute-binding protein family 1... 324 6e-87 ref|YP_001772844.1| extracellular solute-binding protein [Methyl... 303 1e-80 ref|YP_002498015.1| family 1 extracellular solute-binding protei... 297 1e-78 emb|CCA80326.1| putative molybdate-binding periplasmic protein p... 278 4e-73 ref|YP_001242108.1| putative ABC transporter periplasmic substra... 275 3e-72 ref|YP_003753791.1| molybdate-binding periplasmic protein precur... 275 4e-72 ref|YP_001417176.1| extracellular solute-binding protein [Xantho... 275 5e-72 emb|CCA88502.1| putative molybdate-binding periplasmic protein p... 272 4e-71 ref|YP_001207657.1| putative ABC transporter periplasmic substra... 271 7e-71 >ref|YP_003774883.1| solute binding periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62975.1| solute binding periplasmic protein [Herbaspirillum seropedicae SmR1] Length = 262 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 260/262 (99%), Positives = 260/262 (99%) Query: 1 MKSLLSSKSLQRSVLALLIGATSALAAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLIS 60 MKSLLSSK LQRSVLALLIGATSALAAA DIHVVSSGGFAAAYKTLAPEFEKKTGHKLIS Sbjct: 1 MKSLLSSKPLQRSVLALLIGATSALAAATDIHVVSSGGFAAAYKTLAPEFEKKTGHKLIS 60 Query: 61 GWGPSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVK 120 GWGPSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVK Sbjct: 61 GWGPSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVK 120 Query: 121 AGAPRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEP 180 AGAPRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEP Sbjct: 121 AGAPRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEP 180 Query: 181 VGQVVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELV 240 VGQVVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELV Sbjct: 181 VGQVVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELV 240 Query: 241 HFLASPEAQAAIKASGLDPAPR 262 HFLASPEAQAAIKASGLDPAPR Sbjct: 241 HFLASPEAQAAIKASGLDPAPR 262 >ref|ZP_08868496.1| extracellular solute-binding protein family 1 [Azospirillum amazonense Y2] gb|EGY01906.1| extracellular solute-binding protein family 1 [Azospirillum amazonense Y2] Length = 256 Score = 324 bits (831), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 158/232 (68%), Positives = 190/232 (81%) Query: 30 DIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGPSMGETPQAIPNRLQRGEHIDVVIMV 89 ++HV SSGGFAAAYK LAPEFEK+TG+ L+S WGPSMG+TP+AIPNRL++ + IDVVIMV Sbjct: 21 ELHVASSGGFAAAYKALAPEFEKRTGNTLVSVWGPSMGDTPEAIPNRLRQHQDIDVVIMV 80 Query: 90 GDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAPRPDISNLDAFKRTLLTAHSVVYSDS 149 GDSLD LV AG+V +HK+LA+S+IGLAVKAGAP PDIS + A K+ LL A SV YSDS Sbjct: 81 GDSLDTLVRAGQVMDLDHKVLAVSKIGLAVKAGAPHPDISTVAALKKVLLDARSVAYSDS 140 Query: 150 ASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQVVARGDAEIGLQQISELKPVKGIDII 209 ASGVFLST LFKRLGI M K RMIPAEPVG VVARG+AEIG QQISEL P+ GIDI+ Sbjct: 141 ASGVFLSTVLFKRLGIADAMKDKARMIPAEPVGNVVARGEAEIGFQQISELLPLSGIDIV 200 Query: 210 GPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLASPEAQAAIKASGLDPAP 261 GP+P+EAQ++TPFS G+V G E +AA++L+ FL+SP+A + I SGL P P Sbjct: 201 GPLPDEAQKVTPFSIGIVAGTRETQAAEDLIAFLSSPDAASLITKSGLVPVP 252 >ref|YP_001772844.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gb|ACA20410.1| extracellular solute-binding protein family 1 [Methylobacterium sp. 4-46] Length = 263 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 154/256 (60%), Positives = 194/256 (75%) Query: 4 LLSSKSLQRSVLALLIGATSALAAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWG 63 ++ SK L R + +L + A AA++ VVSSGGFAAAY+ LAPEFE++TGH+L++ WG Sbjct: 1 MIRSKFLFRGLGLVLPLLLAGAALAAEVRVVSSGGFAAAYRALAPEFERRTGHRLVAEWG 60 Query: 64 PSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGA 123 PSMG+TPQA+P RL RGE IDVVI+VG +LD L+ GKVS LA S I LAV+AGA Sbjct: 61 PSMGQTPQAVPARLARGEPIDVVIVVGYALDDLIRQGKVSANSRTALARSGIALAVRAGA 120 Query: 124 PRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQ 183 P PDIS+++ +RTLL A S+ YSDSASGV++ LFKRLGI +Q+ K RMIPAEPVG Sbjct: 121 PMPDISSVEGLRRTLLAATSIAYSDSASGVYIERDLFKRLGIAEQVKDKARMIPAEPVGA 180 Query: 184 VVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFL 243 VVARG+AE+G QQ+SELKPV GI I+G +PEE Q T FSAGVV G+ E E A+ L+ FL Sbjct: 181 VVARGEAEVGFQQLSELKPVPGIQIVGLLPEEVQLYTLFSAGVVAGSREPEPARALIRFL 240 Query: 244 ASPEAQAAIKASGLDP 259 A PEA AA++ASG++P Sbjct: 241 AGPEAAAAVRASGMEP 256 >ref|YP_002498015.1| family 1 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gb|ACL57712.1| extracellular solute-binding protein family 1 [Methylobacterium nodulans ORS 2060] Length = 263 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 145/232 (62%), Positives = 179/232 (77%) Query: 30 DIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGPSMGETPQAIPNRLQRGEHIDVVIMV 89 ++ VVSSGGFAAAY+ LAPEFE++TGH L++ WGPSMG+TPQA+P RL RGE IDVVIMV Sbjct: 27 EVRVVSSGGFAAAYRALAPEFERRTGHGLVTEWGPSMGQTPQAVPARLARGEPIDVVIMV 86 Query: 90 GDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAPRPDISNLDAFKRTLLTAHSVVYSDS 149 G +LD L+ GKVS LA S I LAV+AGAP+PDIS++D +RTLL A S+ YSDS Sbjct: 87 GYALDDLIRQGKVSADSRTALARSGIALAVRAGAPKPDISSIDGLRRTLLAAKSIAYSDS 146 Query: 150 ASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQVVARGDAEIGLQQISELKPVKGIDII 209 ASGV++ T+LF+RLGI + K RMIPAEPVG VVARG+AE+G QQ+SELKPV GI+I+ Sbjct: 147 ASGVYIETELFRRLGIADAVKAKARMIPAEPVGAVVARGEAEVGFQQLSELKPVPGIEIV 206 Query: 210 GPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLASPEAQAAIKASGLDPAP 261 G +P E Q T FSAG V G+ EAA L+ FLASP+A AI+ SG++P P Sbjct: 207 GLLPAEVQLYTEFSAGRVEGSRAPEAASALIGFLASPDAAGAIRESGMEPLP 258 >emb|CCA80326.1| putative molybdate-binding periplasmic protein precursor [blood disease bacterium R229] Length = 279 Score = 278 bits (712), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 142/260 (54%), Positives = 185/260 (71%) Query: 1 MKSLLSSKSLQRSVLALLIGATSALAAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLIS 60 M++L S +++ + A+ +G A A D+ V++SGGF AAYK L P FE+ TGH LI+ Sbjct: 15 MQTLRSLRAVVLAFSAVTLGLLPVAAQADDVRVMNSGGFTAAYKALGPGFEQATGHSLIT 74 Query: 61 GWGPSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVK 120 WGPSMG +P+AIPNRL RGE DV+IMVG++LD L+ G V LA SRIG+ VK Sbjct: 75 VWGPSMGASPEAIPNRLARGERADVLIMVGEALDGLIRKGIVDPASRVDLAESRIGMVVK 134 Query: 121 AGAPRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEP 180 AGAP+PDI ++DAF+ LL A SV YSDSASGV++ T LFKRLGI+ +M K R I P Sbjct: 135 AGAPKPDIGSVDAFRNALLKAPSVAYSDSASGVYIETVLFKRLGINDRMRGKARKIEKIP 194 Query: 181 VGQVVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELV 240 VG VVA G+ IG QQ+SEL PV G+D +G IPE Q++T FSAG+ V A EAA+ L+ Sbjct: 195 VGTVVASGEYAIGFQQVSELLPVPGVDFVGTIPEPLQKVTVFSAGIPVNAAHPEAARALI 254 Query: 241 HFLASPEAQAAIKASGLDPA 260 +LASPEA +A++ASG++PA Sbjct: 255 RYLASPEAASAVRASGMEPA 274 >ref|YP_001242108.1| putative ABC transporter periplasmic substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38202.1| putative ABC transporter, periplasmic substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 264 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 137/235 (58%), Positives = 174/235 (74%) Query: 28 AADIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGPSMGETPQAIPNRLQRGEHIDVVI 87 AA+IHV+ SGG AA+K+L PEFE+++GHK+ +GPSMG T AIP RL+RGE DV+I Sbjct: 26 AAEIHVMISGGMTAAFKSLVPEFERRSGHKVDIAYGPSMGTTANAIPVRLERGEPADVLI 85 Query: 88 MVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAPRPDISNLDAFKRTLLTAHSVVYS 147 MVG +L L GKV LA S IG+AVK+G P PDISN DA KR L+ A ++ YS Sbjct: 86 MVGYALSDLTTKGKVMPDSLVELANSPIGVAVKSGTPHPDISNADAVKRMLIAAKTIAYS 145 Query: 148 DSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQVVARGDAEIGLQQISELKPVKGID 207 DSASGV++ST++F +LGI ++M K RMIPA PVG++VA+G+AEIG QQISELKPVKGID Sbjct: 146 DSASGVYVSTEMFDKLGIREEMKGKARMIPATPVGEIVAQGEAEIGFQQISELKPVKGID 205 Query: 208 IIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLASPEAQAAIKASGLDPAPR 262 I+GP+P Q++T FSAG+ A E EA K L+ FL+SP+A+ I SGLDP R Sbjct: 206 IVGPLPAGLQKITVFSAGIATNAREPEAGKALIKFLSSPDARKTIVESGLDPIVR 260 >ref|YP_003753791.1| molybdate-binding periplasmic protein precursor [Ralstonia solanacearum PSI07] emb|CBJ52534.2| putative molybdate-binding periplasmic protein precursor [Ralstonia solanacearum PSI07] Length = 279 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 143/256 (55%), Positives = 181/256 (70%), Gaps = 3/256 (1%) Query: 8 KSLQRSVLAL---LIGATSALAAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGP 64 +SL+ VLA +G A A D+ V++SGGF AAYK L P FE+ TGH LI+ WGP Sbjct: 19 RSLRAVVLAFSAVTLGLLPVAAQADDVRVMNSGGFTAAYKALGPGFEQATGHSLITVWGP 78 Query: 65 SMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAP 124 SMG +P+AIPNRL RGE DV+IMVG++LD L+ G V LA SRIG+ VKAGAP Sbjct: 79 SMGASPEAIPNRLARGERADVLIMVGEALDGLIRKGIVDPASRVDLAESRIGMVVKAGAP 138 Query: 125 RPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQV 184 +PDI ++DAF+ LL A SV YSDSASGV++ T LFKRLGI+ +M K R I PVG V Sbjct: 139 KPDIGSVDAFRNALLKAPSVAYSDSASGVYIETVLFKRLGINDRMRGKARKIEKIPVGTV 198 Query: 185 VARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLA 244 VA G+ IG QQ+SEL PV G+D +G IPE Q++T FSAG+ V A EAA+ L+ +LA Sbjct: 199 VASGEYAIGFQQVSELLPVPGVDFVGTIPEPLQKVTVFSAGIPVNAAHPEAARALIRYLA 258 Query: 245 SPEAQAAIKASGLDPA 260 SPEA +A++ASG++PA Sbjct: 259 SPEAASAVRASGMEPA 274 >ref|YP_001417176.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gb|ABS67519.1| extracellular solute-binding protein family 1 [Xanthobacter autotrophicus Py2] Length = 263 Score = 275 bits (703), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 143/255 (56%), Positives = 185/255 (72%), Gaps = 4/255 (1%) Query: 9 SLQRSVL-ALLIGATSALAAAA---DIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGP 64 ++ RS L ALL+GAT L AAA ++ V+ SGGF+AAYK L P+FE+ TGHK+ + +GP Sbjct: 2 TIARSWLSALLVGATLVLPAAARADEVRVMISGGFSAAYKQLVPQFEQATGHKVSTAYGP 61 Query: 65 SMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAP 124 SMG T AIP RL RGE +DV+IMVG++L L GK K LA S IG+AV+AGAP Sbjct: 62 SMGTTENAIPVRLARGEPVDVLIMVGEALTGLTEQGKADKASRVDLARSPIGVAVRAGAP 121 Query: 125 RPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQV 184 +PDIS++D + LL A S+ YSDSASGV++ +LFKRLGI +QM K RMIPAEPV V Sbjct: 122 KPDISSVDGLRAALLAAKSIAYSDSASGVYVENELFKRLGIQEQMKGKARMIPAEPVAAV 181 Query: 185 VARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLA 244 VARGDAE+G QQISEL PV G++++GPIPE Q++T F+AG+ A A+A +L+ FLA Sbjct: 182 VARGDAELGFQQISELLPVAGVEVVGPIPESVQKITIFAAGISTKAVSAKAGADLLAFLA 241 Query: 245 SPEAQAAIKASGLDP 259 S +A I+ +GLDP Sbjct: 242 SAQAAPVIRKTGLDP 256 >emb|CCA88502.1| putative molybdate-binding periplasmic protein precursor [Ralstonia syzygii R24] Length = 279 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 140/260 (53%), Positives = 183/260 (70%) Query: 1 MKSLLSSKSLQRSVLALLIGATSALAAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLIS 60 M++L S +++ + A+ +G A A D+ V++SGGF AAYK L P FE+ TGH LI+ Sbjct: 15 MQTLRSLRAVVLAFSAVTLGLLPVAAQADDVRVMNSGGFTAAYKALGPGFEQATGHSLIT 74 Query: 61 GWGPSMGETPQAIPNRLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVK 120 WGPSMG +P+AIPNRL RGE DV+IMVG++LD L+ G V LA SRIG+ VK Sbjct: 75 VWGPSMGASPEAIPNRLARGERADVLIMVGEALDGLIRKGIVDPAGRVDLAESRIGMVVK 134 Query: 121 AGAPRPDISNLDAFKRTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEP 180 AGAP+PDI ++DA + LL A SV YSDSASGV++ T LFKRLGI+ +M K R I P Sbjct: 135 AGAPKPDIGSVDALRNALLKAPSVAYSDSASGVYIETVLFKRLGIEDRMRGKARKIEKIP 194 Query: 181 VGQVVARGDAEIGLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELV 240 VG VVA G+ IG QQ+SEL PV G+D +G IPE Q++T FSAG+ V A EAA+ L+ Sbjct: 195 VGTVVASGEYAIGFQQVSELLPVPGVDFVGTIPEPLQKVTVFSAGIPVNAAHPEAARALI 254 Query: 241 HFLASPEAQAAIKASGLDPA 260 +LASP A +A++ASG++PA Sbjct: 255 RYLASPAAASAVRASGMEPA 274 >ref|YP_001207657.1| putative ABC transporter periplasmic substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL79440.1| putative ABC transporter, periplasmic substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 264 Score = 271 bits (693), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 135/234 (57%), Positives = 170/234 (72%) Query: 26 AAAADIHVVSSGGFAAAYKTLAPEFEKKTGHKLISGWGPSMGETPQAIPNRLQRGEHIDV 85 A AA+IHV+ SGG A + LAPEFE++TGHK+ GPSMG T AIP RL+RGE DV Sbjct: 24 APAAEIHVMISGGLTAPFTALAPEFERRTGHKIDIARGPSMGTTTNAIPVRLERGEPADV 83 Query: 86 VIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAPRPDISNLDAFKRTLLTAHSVV 145 +IMVG +L L GKV+ LA S I +AVK+G P PDISN DA KR L+ A S+ Sbjct: 84 LIMVGYALSDLTTKGKVTPDSRVDLANSPIAIAVKSGTPHPDISNADAVKRMLIAAKSIA 143 Query: 146 YSDSASGVFLSTKLFKRLGIDQQMAYKGRMIPAEPVGQVVARGDAEIGLQQISELKPVKG 205 YSDSASGV++ST++F +LGI +QM K RMIPA PVG++VA+G+AEIG QQ+SELKPV G Sbjct: 144 YSDSASGVYVSTEMFDKLGIKEQMKDKARMIPATPVGEIVAKGEAEIGFQQLSELKPVHG 203 Query: 206 IDIIGPIPEEAQQLTPFSAGVVVGAHEAEAAKELVHFLASPEAQAAIKASGLDP 259 IDI+GP+P Q++T FSAG+ A E EA K L+ FL SP+A+ I+ SGL+P Sbjct: 204 IDIVGPLPAGLQKITVFSAGITTSAREPEAGKALIKFLTSPDARKVIEESGLEP 257