BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0007.0085.p         (194 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774862.1| hypothetical protein Hsero_1438 [Herbaspiril...   253   9e-66

>ref|YP_003774862.1| hypothetical protein Hsero_1438 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62954.1| hypothetical protein Hsero_1438 [Herbaspirillum seropedicae SmR1]
          Length = 387

 Score =  253 bits (647), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 154/155 (99%), Positives = 154/155 (99%)

Query: 1   MIFVKWFGWSVLWLLPLLLRTVARALGRKSVFGGRGAIRLWCGSLLLLVASGAIEALIRA 60
           MIFVKWFGWSVLWLLPLLLRTVARALGRKSVFGGRGAIRLWCGSLLLLVASGAIEALIRA
Sbjct: 1   MIFVKWFGWSVLWLLPLLLRTVARALGRKSVFGGRGAIRLWCGSLLLLVASGAIEALIRA 60

Query: 61  QLSSGDDGPGAALMGGALLDALGARISRGLAVAVMLVLLALGLKWLLGALFGRARSEERE 120
           QLSSGDDGPGAALMGGALLDALGARISRGLAVAVMLVLLALGLKWLLGALFGRARSEERE
Sbjct: 61  QLSSGDDGPGAALMGGALLDALGARISRGLAVAVMLVLLALGLKWLLGALFGRARSEERE 120

Query: 121 DHHPELDLGPPRRGSIESERVRMSSLRSSFPAGAR 155
           DHHPELDLGPPRRGSIESERVRMSSLRSSFPAGA 
Sbjct: 121 DHHPELDLGPPRRGSIESERVRMSSLRSSFPAGAE 155