BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0074.p (104 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774851.1| hypothetical protein Hsero_1427 [Herbaspiril... 216 8e-55 ref|YP_296967.1| hypothetical protein Reut_A2762 [Ralstonia eutr... 182 1e-44 ref|YP_727505.1| hypothetical protein H16_A3062 [Ralstonia eutro... 181 3e-44 ref|YP_004686811.1| hypothetical protein CNE_1c30180 [Cupriavidu... 181 4e-44 sp|Q0K784.2|Y3062_RALEH RecName: Full=UPF0345 protein H16_A3062 181 4e-44 ref|YP_585043.1| hypothetical protein Rmet_2901 [Cupriavidus met... 179 1e-43 ref|YP_002006529.1| hypothetical protein RALTA_A2537 [Cupriavidu... 177 6e-43 ref|YP_003051329.1| hypothetical protein Msip34_1557 [Methylovor... 171 3e-41 ref|YP_001099184.1| hypothetical protein HEAR0870 [Herminiimonas... 169 1e-40 ref|YP_004753880.1| putative cytoplasmic protein [Collimonas fun... 169 1e-40 >ref|YP_003774851.1| hypothetical protein Hsero_1427 [Herbaspirillum seropedicae SmR1] gb|ADJ62943.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 109 Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MSTQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGG 60 MSTQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGG Sbjct: 6 MSTQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGG 65 Query: 61 SCRVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 SCRVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG Sbjct: 66 SCRVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 109 >ref|YP_296967.1| hypothetical protein Reut_A2762 [Ralstonia eutropha JMP134] sp|Q46XL0.1|Y2762_RALEJ RecName: Full=UPF0345 protein Reut_A2762 gb|AAZ62123.1| Protein of unknown function DUF1255 [Ralstonia eutropha JMP134] Length = 105 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 83/102 (81%), Positives = 90/102 (88%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTVLF+DGT+KTLGVI PA+LTFNTGAPEIMEIN G C Sbjct: 4 SQFDNVSVVKKANLYFDGKCVSHTVLFSDGTRKTLGVIFPATLTFNTGAPEIMEINAGVC 63 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 RVRL G EAW TY AG F VPGNSSFDIEV ETLDYVCHFG Sbjct: 64 RVRLAGSEAWQTYGAGQQFDVPGNSSFDIEVQETLDYVCHFG 105 >ref|YP_727505.1| hypothetical protein H16_A3062 [Ralstonia eutropha H16] emb|CAJ94137.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 119 Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 89/102 (87%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTVLF DGT+KTLGVI PA+LTFNTGAPEIMEIN G+C Sbjct: 18 SQFDNVSVVKKANLYFDGKCVSHTVLFPDGTRKTLGVIFPAALTFNTGAPEIMEINAGTC 77 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 RVRL G E W TY AG FSVPGNSSFDIEV ETLDYVCHF Sbjct: 78 RVRLAGSEDWQTYGAGQQFSVPGNSSFDIEVQETLDYVCHFA 119 >ref|YP_004686811.1| hypothetical protein CNE_1c30180 [Cupriavidus necator N-1] gb|AEI78330.1| protein UPF0345 [Cupriavidus necator N-1] Length = 119 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 89/102 (87%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTVLF DGT+KTLGVI PA+LTFNTGAPEIMEIN G+C Sbjct: 18 SQFDNVSVVKKANLYFDGKCVSHTVLFPDGTRKTLGVIFPAALTFNTGAPEIMEINAGTC 77 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 RVRL G E W TY AG FSVPGNSSFDIEV ETLDYVCHF Sbjct: 78 RVRLAGSEDWQTYGAGQQFSVPGNSSFDIEVQETLDYVCHFA 119 >sp|Q0K784.2|Y3062_RALEH RecName: Full=UPF0345 protein H16_A3062 Length = 105 Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 89/102 (87%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTVLF DGT+KTLGVI PA+LTFNTGAPEIMEIN G+C Sbjct: 4 SQFDNVSVVKKANLYFDGKCVSHTVLFPDGTRKTLGVIFPAALTFNTGAPEIMEINAGTC 63 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 RVRL G E W TY AG FSVPGNSSFDIEV ETLDYVCHF Sbjct: 64 RVRLAGSEDWQTYGAGQQFSVPGNSSFDIEVQETLDYVCHFA 105 >ref|YP_585043.1| hypothetical protein Rmet_2901 [Cupriavidus metallidurans CH34] sp|Q1LJA2.1|Y2901_RALME RecName: Full=UPF0345 protein Rmet_2901 gb|ABF09774.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 103 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 82/102 (80%), Positives = 89/102 (87%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTV FADGT+KTLGVI PA+LTFNTGAPEIMEIN G C Sbjct: 2 SQFDNVSVVKKANLYFDGKCVSHTVTFADGTRKTLGVIFPAALTFNTGAPEIMEINAGVC 61 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 RVRL G + W TY AG F VPGNSSFDIEVTETLDYVCHFG Sbjct: 62 RVRLAGSDEWKTYGAGQQFDVPGNSSFDIEVTETLDYVCHFG 103 >ref|YP_002006529.1| hypothetical protein RALTA_A2537 [Cupriavidus taiwanensis LMG 19424] sp|B3R6D5.1|Y2537_CUPTR RecName: Full=UPF0345 protein RALTA_A2537 emb|CAQ70468.1| conserved hypothetical protein, DUF1255 [Cupriavidus taiwanensis LMG 19424] Length = 105 Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 81/101 (80%), Positives = 87/101 (86%) Query: 3 TQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSC 62 +QFDNV+V+KK N+YFDGKCVSHTVLF DGT+KTLGVI PASLTFNTGA EIMEIN G+C Sbjct: 4 SQFDNVSVVKKANLYFDGKCVSHTVLFPDGTRKTLGVIFPASLTFNTGAAEIMEINAGTC 63 Query: 63 RVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHF 103 RVRL G E W Y AG FSVPGNSSFDIEV ETLDYVCHF Sbjct: 64 RVRLAGSEDWQAYGAGQQFSVPGNSSFDIEVQETLDYVCHF 104 >ref|YP_003051329.1| hypothetical protein Msip34_1557 [Methylovorus glucosetrophus SIP3-4] ref|YP_004040013.1| hypothetical protein MPQ_1622 [Methylovorus sp. MP688] gb|ACT50802.1| protein of unknown function DUF1255 [Methylovorus glucosetrophus SIP3-4] gb|ADQ84777.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 103 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 77/100 (77%), Positives = 88/100 (88%) Query: 4 QFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGGSCR 63 QFDNV+V KK NVYFDGKCVSHTV+F +GT+ T+GVI P++LTFNTG+PE+MEIN G C+ Sbjct: 3 QFDNVSVKKKANVYFDGKCVSHTVMFPNGTRCTVGVIFPSTLTFNTGSPELMEINAGVCK 62 Query: 64 VRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHF 103 VRLKGEEAWNTY AG F+VPGNSSFDIE ETLDYVCHF Sbjct: 63 VRLKGEEAWNTYQAGEKFTVPGNSSFDIETIETLDYVCHF 102 >ref|YP_001099184.1| hypothetical protein HEAR0870 [Herminiimonas arsenicoxydans] sp|A4G3H0.1|Y870_HERAR RecName: Full=UPF0345 protein HEAR0870 emb|CAL61057.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 104 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 74/103 (71%), Positives = 85/103 (82%) Query: 1 MSTQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGG 60 M+TQFDNV+V+KK N+YFDGKCVSHTVLFADGTKKT+G+I P++L FNTGA EIME+N G Sbjct: 1 MTTQFDNVSVVKKANIYFDGKCVSHTVLFADGTKKTIGIIFPSTLKFNTGAAEIMELNAG 60 Query: 61 SCRVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHF 103 CR+RL G WNTY G F VP NSSFDIE +TLDYVCHF Sbjct: 61 KCRIRLAGATEWNTYEGGQQFEVPANSSFDIETVDTLDYVCHF 103 >ref|YP_004753880.1| putative cytoplasmic protein [Collimonas fungivorans Ter331] gb|AEK63057.1| Putative cytoplasmic protein [Collimonas fungivorans Ter331] Length = 104 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 75/104 (72%), Positives = 91/104 (87%) Query: 1 MSTQFDNVTVLKKGNVYFDGKCVSHTVLFADGTKKTLGVILPASLTFNTGAPEIMEINGG 60 M+TQFDNVTVLK+GNVYFDGKCVSHTV+FADG+KKTLGVILP+SLTF+TG EIM++ G Sbjct: 1 MTTQFDNVTVLKQGNVYFDGKCVSHTVVFADGSKKTLGVILPSSLTFSTGVAEIMDVTSG 60 Query: 61 SCRVRLKGEEAWNTYAAGTTFSVPGNSSFDIEVTETLDYVCHFG 104 SCRVR K ++AW TY++G +F VP NSSFDIE ETL+YVC++ Sbjct: 61 SCRVRQKDQQAWTTYSSGESFEVPANSSFDIETLETLNYVCNYA 104