BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0045.p (773 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774823.1| ATP-dependent protease ATP-binding specifici... 1560 0.0 ref|YP_004753912.1| ATP-dependent Clp protease ATP-binding subun... 1466 0.0 ref|YP_001354204.1| ATP-dependent Clp protease ATP-binding subun... 1446 0.0 ref|YP_001100696.1| clpA-clpP serine protease ATP-dependent spec... 1441 0.0 ref|ZP_08274164.1| ATP-dependent Clp protease ATP-binding subuni... 1430 0.0 ref|ZP_04577451.1| ATP-dependent Clp protease ATP-binding subuni... 1331 0.0 ref|ZP_04579605.1| ATP-dependent Clp protease ATP-binding subuni... 1328 0.0 ref|YP_002982289.1| ATP-dependent Clp protease, ATP-binding subu... 1327 0.0 ref|YP_001900290.1| ATP-dependent Clp protease, ATP-binding subu... 1327 0.0 ref|ZP_07676218.1| ATP-dependent Clp protease ATP-binding subuni... 1325 0.0 >ref|YP_003774823.1| ATP-dependent protease ATP-binding specificity subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62915.1| ATP-dependent protease (ATP-binding specificity subunit) protein [Herbaspirillum seropedicae SmR1] Length = 767 Score = 1560 bits (4039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/767 (100%), Positives = 767/767 (100%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN Sbjct: 1 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 186 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN Sbjct: 121 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 180 Query: 187 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 246 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP Sbjct: 181 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 240 Query: 247 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 306 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS Sbjct: 241 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 300 Query: 307 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 366 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI Sbjct: 301 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 360 Query: 367 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 426 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ Sbjct: 361 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 420 Query: 427 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 486 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA Sbjct: 421 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 480 Query: 487 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 546 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP Sbjct: 481 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 540 Query: 547 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 606 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR Sbjct: 541 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 600 Query: 607 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 666 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI Sbjct: 601 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 660 Query: 667 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 726 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA Sbjct: 661 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 720 Query: 727 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 773 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE Sbjct: 721 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 767 >ref|YP_004753912.1| ATP-dependent Clp protease ATP-binding subunit clpA [Collimonas fungivorans Ter331] gb|AEK63089.1| ATP-dependent Clp protease ATP-binding subunit clpA [Collimonas fungivorans Ter331] Length = 772 Score = 1466 bits (3795), Expect = 0.0, Method: Compositional matrix adjust. Identities = 713/773 (92%), Positives = 748/773 (96%), Gaps = 1/773 (0%) Query: 1 MRDGGSMIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDL 60 M DGGSMIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNPSAAEVLRAC+VNIDD+ Sbjct: 1 MHDGGSMIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPSAAEVLRACAVNIDDM 60 Query: 61 RKTLTNFITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIF 120 RKTLT FI DNTPTVPG+NEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIF Sbjct: 61 RKTLTIFIGDNTPTVPGSNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIF 120 Query: 121 GEKDSHAVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQ 180 GEKDSHAVYYLHQQGVTRLDVVNFISHGVRKDQQAD QK+ EGAE+VQAEGQ KESPLDQ Sbjct: 121 GEKDSHAVYYLHQQGVTRLDVVNFISHGVRKDQQADAQKSSEGAEEVQAEGQAKESPLDQ 180 Query: 181 FTQNLNKAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRV 240 FTQNLNK A EGKIDPLIGRE EVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWR+ Sbjct: 181 FTQNLNKLATEGKIDPLIGREYEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRI 240 Query: 241 TQGDVPEILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTII 300 TQGDVPEIL+NA+VYSLDMG+LLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTII Sbjct: 241 TQGDVPEILQNAIVYSLDMGSLLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTII 300 Query: 301 GAGSASGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTV 360 GAGSASGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTV Sbjct: 301 GAGSASGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTV 360 Query: 361 EQTVQILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRI 420 EQTVQILRGLKS+FEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRI Sbjct: 361 EQTVQILRGLKSRFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRI 420 Query: 421 LPKSKQKKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALS 480 LPKSKQKKTIGK EIE+II+KIARIPPQSVNQDDR+KLQTIDRDL+NVVFGQDPAI+AL+ Sbjct: 421 LPKSKQKKTIGKGEIEDIIAKIARIPPQSVNQDDRSKLQTIDRDLRNVVFGQDPAIDALA 480 Query: 481 SAIKMARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVS 540 SAIKMARAGLGKTD+PIGSFLFSGPTGVGKTEVAKQLAFILGI+L+RFDMSEYMERHAVS Sbjct: 481 SAIKMARAGLGKTDRPIGSFLFSGPTGVGKTEVAKQLAFILGIDLIRFDMSEYMERHAVS 540 Query: 541 RLIGAPPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNG 600 RLIGAPPGYVGFDQGGLLTEAV KKPHAVLLLDEIEKAHPDIFNILLQVMDHG LTDNNG Sbjct: 541 RLIGAPPGYVGFDQGGLLTEAVTKKPHAVLLLDEIEKAHPDIFNILLQVMDHGALTDNNG 600 Query: 601 RKTDFRNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFR 660 RK DFRNVIIIMTTNAGAESLQKR+IGFT+KKEAGDEMADIKRMFTPEFRNR+D+IISF Sbjct: 601 RKADFRNVIIIMTTNAGAESLQKRSIGFTDKKEAGDEMADIKRMFTPEFRNRIDSIISFH 660 Query: 661 PLDEEIILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDL 720 LDEE+ILRVVDKFLMQLEEQLHEKKVEAVF+++LRKFL KKGFDPLMGARPMSRLIQD+ Sbjct: 661 ALDEEVILRVVDKFLMQLEEQLHEKKVEAVFTENLRKFLAKKGFDPLMGARPMSRLIQDM 720 Query: 721 IRKALADELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 773 IRKALADELLFGKLV+GGRVTV++DDKD I L+F E DSS P P+E +EVE Sbjct: 721 IRKALADELLFGKLVTGGRVTVDLDDKDLISLDFAE-KDSSSPAAPEETVEVE 772 >ref|YP_001354204.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Janthinobacterium sp. Marseille] gb|ABR89172.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Janthinobacterium sp. Marseille] Length = 767 Score = 1446 bits (3744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 705/768 (91%), Positives = 739/768 (96%), Gaps = 2/768 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNPSAAEVLRAC+VNI+DLRKTLTN Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPSAAEVLRACAVNIEDLRKTLTN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTPTVPG EVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIGDNTPTVPGAAEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDV-QAEGQQKESPLDQFTQNL 185 AVYYLHQQGVTRLDVVNFISHGVRKDQQ+D QKAPEGAED EGQQKES LDQFTQNL Sbjct: 121 AVYYLHQQGVTRLDVVNFISHGVRKDQQSDAQKAPEGAEDAPSGEGQQKESALDQFTQNL 180 Query: 186 NKAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDV 245 NK A+EGKIDPLIGRE EVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWR+TQGDV Sbjct: 181 NKMASEGKIDPLIGREGEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQGDV 240 Query: 246 PEILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSA 305 PE+L+NAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKD+PNGILFIDEIHTIIGAGSA Sbjct: 241 PEVLQNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDNPNGILFIDEIHTIIGAGSA 300 Query: 306 SGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQ 365 SGGTLDASNLLKPALS+GQLKCIGATT+TEFRGVFEKDHALSRRFQKIDVNEPTVEQT+Q Sbjct: 301 SGGTLDASNLLKPALSNGQLKCIGATTFTEFRGVFEKDHALSRRFQKIDVNEPTVEQTIQ 360 Query: 366 ILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 425 ILRGLKS+FEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK Sbjct: 361 ILRGLKSRFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 420 Query: 426 QKKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKM 485 QKKTIGK EIE+IISKIARIP Q+VNQDDR+KLQTIDRDLKNVVFGQDPA+EAL SAIK+ Sbjct: 421 QKKTIGKSEIEDIISKIARIPAQTVNQDDRSKLQTIDRDLKNVVFGQDPALEALGSAIKV 480 Query: 486 ARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGA 545 ARAGLGKTDKPIGSFLFSGPTGVGKTE AKQLAFI+GI+L+RFDMSEYMERHAVSRLIGA Sbjct: 481 ARAGLGKTDKPIGSFLFSGPTGVGKTEAAKQLAFIMGIDLIRFDMSEYMERHAVSRLIGA 540 Query: 546 PPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDF 605 PPGYVGFDQGGLLTEA+ KKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRK DF Sbjct: 541 PPGYVGFDQGGLLTEAITKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKADF 600 Query: 606 RNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEE 665 RNVIIIMTTNAGAESLQKRTIGFTEKKE GDEMADIKRMFTPEFRNRLDAIISFR LDEE Sbjct: 601 RNVIIIMTTNAGAESLQKRTIGFTEKKETGDEMADIKRMFTPEFRNRLDAIISFRALDEE 660 Query: 666 IILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKAL 725 IILRVVDKFLMQLEEQLHEKKVEA+F++ LR FL KKGFDPLMGARPMSRLIQD+IRKAL Sbjct: 661 IILRVVDKFLMQLEEQLHEKKVEAIFTEKLRTFLAKKGFDPLMGARPMSRLIQDMIRKAL 720 Query: 726 ADELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 773 ADELLFG+LVSGG+VTV++DDKDQIKL+F EG D++PP E +EVE Sbjct: 721 ADELLFGRLVSGGKVTVDLDDKDQIKLDFSEG-DTAPPAATPETVEVE 767 >ref|YP_001100696.1| clpA-clpP serine protease ATP-dependent specificity subunit [Herminiimonas arsenicoxydans] emb|CAL62575.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Herminiimonas arsenicoxydans] Length = 767 Score = 1441 bits (3729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 700/768 (91%), Positives = 739/768 (96%), Gaps = 2/768 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNPSAAEVLRAC+VNIDDLRKTLTN Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPSAAEVLRACAVNIDDLRKTLTN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTPTVPG EVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIGDNTPTVPGAAEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDV-QAEGQQKESPLDQFTQNL 185 AVYYLHQQGVTRLDVVNFISHGVRKDQQ D QK+ EGAED A+GQQKES LDQFTQNL Sbjct: 121 AVYYLHQQGVTRLDVVNFISHGVRKDQQIDVQKSSEGAEDAPSADGQQKESALDQFTQNL 180 Query: 186 NKAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDV 245 NK A EGKIDPLIGRE EVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWR+TQG+V Sbjct: 181 NKLATEGKIDPLIGREGEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQGEV 240 Query: 246 PEILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSA 305 PE+L+NAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKD+PNGILFIDEIHTIIGAGSA Sbjct: 241 PEVLQNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDNPNGILFIDEIHTIIGAGSA 300 Query: 306 SGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQ 365 SGGTLDASNLLKPALS+GQLKCIGATT+TEFRGVFEKDHALSRRFQKIDVNEPTVEQT+Q Sbjct: 301 SGGTLDASNLLKPALSNGQLKCIGATTFTEFRGVFEKDHALSRRFQKIDVNEPTVEQTIQ 360 Query: 366 ILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 425 ILRGLKS+FEEHHGVKYS+SAL SAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK Sbjct: 361 ILRGLKSRFEEHHGVKYSSSALVSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 420 Query: 426 QKKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKM 485 QKKTIGK EIE+IISKIARIP Q+VNQDDR+KLQTI+RDLKNVVFGQDPA+EAL SAIK+ Sbjct: 421 QKKTIGKAEIEDIISKIARIPAQTVNQDDRSKLQTIERDLKNVVFGQDPALEALGSAIKV 480 Query: 486 ARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGA 545 ARAGLGKTDKPIGSFLFSGPTGVGKTE AKQLAFI+GIEL+RFDMSEYMERHAVSRLIGA Sbjct: 481 ARAGLGKTDKPIGSFLFSGPTGVGKTEAAKQLAFIMGIELIRFDMSEYMERHAVSRLIGA 540 Query: 546 PPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDF 605 PPGYVGFDQGGLLTEA+ KKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRK DF Sbjct: 541 PPGYVGFDQGGLLTEAITKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKADF 600 Query: 606 RNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEE 665 RNVIIIMTTNAGAESLQKR+IGFT+KKEAGDEMADIKRMFTPEFRNRLDAIISFR LDEE Sbjct: 601 RNVIIIMTTNAGAESLQKRSIGFTDKKEAGDEMADIKRMFTPEFRNRLDAIISFRALDEE 660 Query: 666 IILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKAL 725 IILRVVDKFLMQLEEQLHEKKVEA+F+D+LR FL KKGFDPLMGARPMSRLIQD+IRKAL Sbjct: 661 IILRVVDKFLMQLEEQLHEKKVEAIFTDNLRTFLAKKGFDPLMGARPMSRLIQDMIRKAL 720 Query: 726 ADELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 773 ADELLFG+LV+GG+VTV++D+KDQIKL+F EG D++PP QE +EVE Sbjct: 721 ADELLFGRLVTGGKVTVDLDEKDQIKLDFSEG-DTAPPTAAQETIEVE 767 >ref|ZP_08274164.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacteraceae bacterium IMCC9480] gb|EGF32361.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacteraceae bacterium IMCC9480] Length = 767 Score = 1430 bits (3701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 697/767 (90%), Positives = 743/767 (96%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLAL+DNPSAAEVLRAC+VNI+DLRKTLTN Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALVDNPSAAEVLRACAVNIEDLRKTLTN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTPTVPG +EVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIADNTPTVPGASEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 186 AVYYLHQQGVTRLDVVNFISHGVRKDQQA+PQKAPE E+ AEGQQKESPLDQFTQNLN Sbjct: 121 AVYYLHQQGVTRLDVVNFISHGVRKDQQAEPQKAPENGEEAPAEGQQKESPLDQFTQNLN 180 Query: 187 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 246 K A EGKIDPLIGRE E+ERV+QTLCRRRKNNPLLVGEAGVGKTAIAEGLAWR+TQ +VP Sbjct: 181 KLALEGKIDPLIGREPELERVVQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQKEVP 240 Query: 247 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 306 EIL++A+VYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAG+AS Sbjct: 241 EILQDAIVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGAAS 300 Query: 307 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 366 GGTLDASNLLKPALSSGQLKCIGATTYTE+RGVFEKDHALSRRFQK+DVNEPTVEQT+QI Sbjct: 301 GGTLDASNLLKPALSSGQLKCIGATTYTEYRGVFEKDHALSRRFQKVDVNEPTVEQTIQI 360 Query: 367 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 426 LRGLKS+FEEHHG+KYSASALT+AAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ Sbjct: 361 LRGLKSRFEEHHGIKYSASALTTAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 420 Query: 427 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 486 KKTIGK EIE+II+KIARIPPQSVNQDDR+KLQTI+RDLKNVVFGQ+PAIEALSSAIKMA Sbjct: 421 KKTIGKAEIEDIIAKIARIPPQSVNQDDRSKLQTIERDLKNVVFGQEPAIEALSSAIKMA 480 Query: 487 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 546 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAF+LGIEL+RFDMSEYMERHAVSRLIGAP Sbjct: 481 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFVLGIELIRFDMSEYMERHAVSRLIGAP 540 Query: 547 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 606 PGYVGFDQGGLLTEA+ KKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRK DFR Sbjct: 541 PGYVGFDQGGLLTEAITKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKADFR 600 Query: 607 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 666 NVII+MTTNAGAESLQKR+IGFTEKKEAGDEM DIKRMFTPEFRNR+D+IISF L+EEI Sbjct: 601 NVIIVMTTNAGAESLQKRSIGFTEKKEAGDEMEDIKRMFTPEFRNRIDSIISFGALNEEI 660 Query: 667 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 726 ILRVVDKFLMQLEEQLHEKKV+A+F++ LR FLGKKGFDPLMGARPM+RLIQD+IRKALA Sbjct: 661 ILRVVDKFLMQLEEQLHEKKVDAIFTEKLRSFLGKKGFDPLMGARPMARLIQDMIRKALA 720 Query: 727 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLEVE 773 DELLFGKLVSGG+VTV++DDKDQIKL+F +GD + PP PQE LEVE Sbjct: 721 DELLFGKLVSGGKVTVDLDDKDQIKLDFSDGDSTPPPAAPQETLEVE 767 >ref|ZP_04577451.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacter formigenes HOxBLS] gb|EEO28413.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacter formigenes HOxBLS] Length = 767 Score = 1331 bits (3445), Expect = 0.0, Method: Compositional matrix adjust. Identities = 641/766 (83%), Positives = 709/766 (92%), Gaps = 1/766 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+R+EFITVEHLLLALLDNPSA+EVLRAC+ N+++LRK L + Sbjct: 1 MIAQELEVSLHMAFVEARQARYEFITVEHLLLALLDNPSASEVLRACNANLNELRKMLGD 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTP VPGT EVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIRDNTPVVPGTGEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEG-QQKESPLDQFTQNL 185 AVYYLHQQGVTRLDVVNFISHGVRK+ Q D K EGAE++Q + K+SPLD +TQNL Sbjct: 121 AVYYLHQQGVTRLDVVNFISHGVRKNTQQDTPKQTEGAEEIQNDAVAGKDSPLDLYTQNL 180 Query: 186 NKAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDV 245 N+ AA G+IDPLIGR+ E++RVIQ LCRRRKNNPLLVGEAGVGKTAIAEGLAWR+TQ +V Sbjct: 181 NREAAVGRIDPLIGRDEEIDRVIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITQKNV 240 Query: 246 PEILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSA 305 PE+L+NAVVY+LDMGALLAGTKYRGDFEQRLKAVLKQL D+ ILFIDEIHTIIGAGSA Sbjct: 241 PEVLENAVVYALDMGALLAGTKYRGDFEQRLKAVLKQLDDNAGSILFIDEIHTIIGAGSA 300 Query: 306 SGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQ 365 SGGTLDASNLLKPALSSG+LKCIGATT+ EFR VFEKDHAL+RRFQKID+NEPTVEQTVQ Sbjct: 301 SGGTLDASNLLKPALSSGKLKCIGATTFAEFRNVFEKDHALARRFQKIDINEPTVEQTVQ 360 Query: 366 ILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSK 425 ILRGLKS+FE+HH VKYS SAL +AAEL+ARFINDRHLPDKAIDVIDEAGAAQR+LPKSK Sbjct: 361 ILRGLKSRFEDHHNVKYSVSALITAAELSARFINDRHLPDKAIDVIDEAGAAQRVLPKSK 420 Query: 426 QKKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKM 485 QKKTIGK EIE+IISKIARIPPQ+VNQDDR+KLQ ++RDLKNVVFGQD AI+ALS++IKM Sbjct: 421 QKKTIGKAEIEDIISKIARIPPQTVNQDDRSKLQNLERDLKNVVFGQDAAIDALSASIKM 480 Query: 486 ARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGA 545 ARAGLGKTDKPIG+FLFSGPTGVGKTEVA+QLAF LGI+L+RFDMSEYMERHAVSR+IGA Sbjct: 481 ARAGLGKTDKPIGAFLFSGPTGVGKTEVARQLAFALGIDLIRFDMSEYMERHAVSRMIGA 540 Query: 546 PPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDF 605 PPGYVGFDQGGLLTEA+ KKPHAVLLLDEIEKAHPDIF+ILLQVMDHGTLTDNNGRK DF Sbjct: 541 PPGYVGFDQGGLLTEAITKKPHAVLLLDEIEKAHPDIFSILLQVMDHGTLTDNNGRKADF 600 Query: 606 RNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEE 665 RNV+IIMTTNAGAESLQ+ T+GFT +KE+GDEM DIKRMFTPEFRNRLDAIISFRPL+EE Sbjct: 601 RNVVIIMTTNAGAESLQRSTMGFTNQKESGDEMVDIKRMFTPEFRNRLDAIISFRPLNEE 660 Query: 666 IILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKAL 725 IILRVVDKFLMQLEEQLHEKKV+ VF+++LR+ L K+GFDPLMGARPM RLIQDLIRKAL Sbjct: 661 IILRVVDKFLMQLEEQLHEKKVDVVFTEALRRMLAKRGFDPLMGARPMLRLIQDLIRKAL 720 Query: 726 ADELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLE 771 ADELLFG+LV+GG V V+ DD+D+I+LEFPE S PE +LE Sbjct: 721 ADELLFGRLVAGGAVVVDTDDRDEIRLEFPEKVPESVPENNALQLE 766 >ref|ZP_04579605.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacter formigenes OXCC13] gb|EEO30578.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Oxalobacter formigenes OXCC13] Length = 771 Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust. Identities = 642/752 (85%), Positives = 701/752 (93%), Gaps = 2/752 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+R+EFITVEHLLLALLDNPSA+EVL+AC+ +I L+K L++ Sbjct: 1 MIAQELEVSLHMAFVEARQARYEFITVEHLLLALLDNPSASEVLKACNADIPALKKMLSD 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 F++DNTP VPGT EVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FVSDNTPIVPGTAEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEG--QQKESPLDQFTQN 184 AVYYLHQQGVTRLDVVN+ISHGVRK+ Q++ K EGAE++Q E K+SPLD +T N Sbjct: 121 AVYYLHQQGVTRLDVVNYISHGVRKNVQSEMPKQAEGAEEMQGEAGVAGKDSPLDLYTLN 180 Query: 185 LNKAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGD 244 LNK AA GKIDPLIGRE E++RVIQ LCRRRKNNPLLVGEAGVGKTA+AEGLAWR+TQ Sbjct: 181 LNKQAASGKIDPLIGREEEIDRVIQVLCRRRKNNPLLVGEAGVGKTALAEGLAWRITQNS 240 Query: 245 VPEILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGS 304 VP++L +AVVY+LDMGALLAGTKYRGDFEQRLKAVLKQL D+PN ILFIDEIHTIIGAGS Sbjct: 241 VPDVLHDAVVYALDMGALLAGTKYRGDFEQRLKAVLKQLSDNPNSILFIDEIHTIIGAGS 300 Query: 305 ASGGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTV 364 ASGGTLDASNLLKPALS GQLKCIGATT+TE+RGVFEKDHAL+RRFQKIDVNEPTVEQTV Sbjct: 301 ASGGTLDASNLLKPALSGGQLKCIGATTFTEYRGVFEKDHALARRFQKIDVNEPTVEQTV 360 Query: 365 QILRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKS 424 QILRGLKS+FEEHH VKYS SAL SAAEL+ARFINDR LPDKAIDVIDEAGAAQRILPKS Sbjct: 361 QILRGLKSRFEEHHKVKYSVSALISAAELSARFINDRQLPDKAIDVIDEAGAAQRILPKS 420 Query: 425 KQKKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIK 484 KQKKTIGK EIE+IISKIARIP QSVNQDDR+KLQ +DRDLK+VVFGQD AI+ALS++IK Sbjct: 421 KQKKTIGKAEIEDIISKIARIPAQSVNQDDRSKLQNLDRDLKSVVFGQDAAIDALSASIK 480 Query: 485 MARAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIG 544 MARAGLGKTDKPIG+FLFSGPTGVGKTEVAKQLAF LGI+L+RFDMSEYMERHAVSR+IG Sbjct: 481 MARAGLGKTDKPIGAFLFSGPTGVGKTEVAKQLAFTLGIDLIRFDMSEYMERHAVSRMIG 540 Query: 545 APPGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTD 604 APPGYVGFDQGGLLTEA+ KKPHAVLLLDEIEKAHPDIF+ILLQVMDHGTLTDNNGRK D Sbjct: 541 APPGYVGFDQGGLLTEAITKKPHAVLLLDEIEKAHPDIFSILLQVMDHGTLTDNNGRKAD 600 Query: 605 FRNVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDE 664 FRNVIIIMTTNAGAESLQK +IGFT +KE GDEM DIKRMFTPEFRNRLD IISF L+E Sbjct: 601 FRNVIIIMTTNAGAESLQKSSIGFTNQKEKGDEMVDIKRMFTPEFRNRLDGIISFSALNE 660 Query: 665 EIILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKA 724 +IILRVVDKFLMQLEEQLHEKKVEA+F+++LRKFL KKGFDPLMGARPM RLIQDLIRKA Sbjct: 661 DIILRVVDKFLMQLEEQLHEKKVEAIFTEALRKFLAKKGFDPLMGARPMLRLIQDLIRKA 720 Query: 725 LADELLFGKLVSGGRVTVEMDDKDQIKLEFPE 756 LADELLFGKLV+GG V V++DDK++IKLEFPE Sbjct: 721 LADELLFGKLVAGGSVIVDLDDKEEIKLEFPE 752 >ref|YP_002982289.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia pickettii 12D] gb|ACS63617.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia pickettii 12D] Length = 762 Score = 1327 bits (3435), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/765 (84%), Positives = 701/765 (91%), Gaps = 4/765 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNP+AAEVLRAC+ NI+DLR L N Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPTAAEVLRACAANIEDLRTHLKN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTP VPGT+EVDTQPTLGFQRVIQRAIMHVQS SNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIADNTPVVPGTDEVDTQPTLGFQRVIQRAIMHVQSTSNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 186 AVYYL QQGVTRLDVVNFISHG+RKDQ A+P K G KESPL+QFTQNLN Sbjct: 121 AVYYLQQQGVTRLDVVNFISHGIRKDQ-AEPAKQ-GEGNPEGEGGDGKESPLEQFTQNLN 178 Query: 187 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 246 A GKIDPLIGRE EVERV+Q LCRRRKNNPLLVGEAGVGKTAIAEGLAWR+T+G+VP Sbjct: 179 ALAKAGKIDPLIGREQEVERVVQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITKGEVP 238 Query: 247 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 306 +IL +VVYSLDMGALLAGTKYRGDFEQRLK VLK LKD+PN ILFIDEIHT+IGAG+AS Sbjct: 239 DILAKSVVYSLDMGALLAGTKYRGDFEQRLKGVLKSLKDNPNAILFIDEIHTLIGAGAAS 298 Query: 307 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 366 GGTLDASNLLKPALSSG LKCIGATT+TE+RG+FEKD ALSRRFQKIDV EPTV+QTVQI Sbjct: 299 GGTLDASNLLKPALSSGALKCIGATTFTEYRGIFEKDAALSRRFQKIDVVEPTVDQTVQI 358 Query: 367 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 426 LRGLKS+FEEHHGVKY++SALT+AAEL+ARFI DRHLPDKAIDVIDEAGAAQRILPKSKQ Sbjct: 359 LRGLKSRFEEHHGVKYASSALTAAAELSARFITDRHLPDKAIDVIDEAGAAQRILPKSKQ 418 Query: 427 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 486 KKTIGK EIE+I+S+IAR+PPQSV+QDDR+KLQT++RDLK+VVFGQDPAI+AL+SAIKM+ Sbjct: 419 KKTIGKGEIEDIVSRIARVPPQSVSQDDRSKLQTLERDLKSVVFGQDPAIDALASAIKMS 478 Query: 487 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 546 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIEL+RFDMSEYMERHAVSRLIGAP Sbjct: 479 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELIRFDMSEYMERHAVSRLIGAP 538 Query: 547 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 606 PGYVGFDQGGLLTEAV KKPH VLLLDEIEKAHPDIFNILLQVMDHG LTDNNGRK DFR Sbjct: 539 PGYVGFDQGGLLTEAVTKKPHCVLLLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFR 598 Query: 607 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 666 NVIIIMTTNAGAE++ K TIGFT +E GDEMADIKRMFTPEFRNRLDA ISFR LDEEI Sbjct: 599 NVIIIMTTNAGAETMNKATIGFTTAREQGDEMADIKRMFTPEFRNRLDATISFRSLDEEI 658 Query: 667 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 726 I+RVVDKFLMQLEEQLHEKKV+A+F++ LR+FL KKGFDPLMGARPM RLIQDLIRKALA Sbjct: 659 IMRVVDKFLMQLEEQLHEKKVDAIFTEKLRRFLAKKGFDPLMGARPMQRLIQDLIRKALA 718 Query: 727 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLE 771 DELLFGKLV+GG+V V++DD D +KLEF E + +PP QE+ E Sbjct: 719 DELLFGKLVNGGKVVVDLDDADAVKLEFSE--NEAPPAPAQEEAE 761 >ref|YP_001900290.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia pickettii 12J] gb|ACD27858.1| ATP-dependent Clp protease, ATP-binding subunit clpA [Ralstonia pickettii 12J] Length = 762 Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/765 (84%), Positives = 701/765 (91%), Gaps = 4/765 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNP+AAEVLRAC+ NI+DLR L N Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPTAAEVLRACAANIEDLRTHLKN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTP VPGT+EVDTQPTLGFQRVIQRAIMHVQS SNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIADNTPVVPGTDEVDTQPTLGFQRVIQRAIMHVQSTSNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 186 AVYYL QQGVTRLDVVNFISHG+RKDQ A+P K G KESPL+QFTQNLN Sbjct: 121 AVYYLQQQGVTRLDVVNFISHGIRKDQ-AEPAKQ-GEGNPEGEGGDGKESPLEQFTQNLN 178 Query: 187 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 246 A GKIDPLIGRE EVERV+Q LCRRRKNNPLLVGEAGVGKTAIAEGLAWR+T+G+VP Sbjct: 179 ALAKAGKIDPLIGREQEVERVVQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITKGEVP 238 Query: 247 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 306 +IL +VVYSLDMGALLAGTKYRGDFEQRLK VLK LKD+PN ILFIDEIHT+IGAG+AS Sbjct: 239 DILAKSVVYSLDMGALLAGTKYRGDFEQRLKGVLKSLKDNPNAILFIDEIHTLIGAGAAS 298 Query: 307 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 366 GGTLDASNLLKPALSSG LKCIGATT+TE+RG+FEKD ALSRRFQKIDV EPTV+QTVQI Sbjct: 299 GGTLDASNLLKPALSSGALKCIGATTFTEYRGIFEKDAALSRRFQKIDVVEPTVDQTVQI 358 Query: 367 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 426 LRGLKS+FEEHHGVKY++SALT+AAEL+ARFI DRHLPDKAIDVIDEAGAAQRILPKSKQ Sbjct: 359 LRGLKSRFEEHHGVKYASSALTAAAELSARFITDRHLPDKAIDVIDEAGAAQRILPKSKQ 418 Query: 427 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 486 KKTIGK EIE+I+S+IAR+PPQSV+QDDR+KLQT++RDLK+VVFGQDPAI+AL+SAIKM+ Sbjct: 419 KKTIGKGEIEDIVSRIARVPPQSVSQDDRSKLQTLERDLKSVVFGQDPAIDALASAIKMS 478 Query: 487 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 546 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIEL+RFDMSEYMERHAVSRLIGAP Sbjct: 479 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELIRFDMSEYMERHAVSRLIGAP 538 Query: 547 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 606 PGYVGFDQGGLLTEAV KKPH VLLLDEIEKAHPDIFNILLQVMDHG LTDNNGRK DFR Sbjct: 539 PGYVGFDQGGLLTEAVTKKPHCVLLLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFR 598 Query: 607 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 666 NVIIIMTTNAGAE++ K TIGFT +E GDEMADIKRMFTPEFRNRLDA ISFR LDEEI Sbjct: 599 NVIIIMTTNAGAETMNKATIGFTTAREQGDEMADIKRMFTPEFRNRLDATISFRSLDEEI 658 Query: 667 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 726 I+RVVDKFLMQLEEQLHEKKV+A+F++ LR+FL KKGFDPLMGARPM RLIQDLIRKALA Sbjct: 659 IMRVVDKFLMQLEEQLHEKKVDAIFTEKLRRFLAKKGFDPLMGARPMQRLIQDLIRKALA 718 Query: 727 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLE 771 DELLFGKLV+GG+V V++DD D +KLEF E + +PP QE+ E Sbjct: 719 DELLFGKLVNGGKVIVDLDDADAVKLEFSE--NEAPPAPAQEEAE 761 >ref|ZP_07676218.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp. 5_7_47FAA] gb|EFP65556.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Ralstonia sp. 5_7_47FAA] Length = 762 Score = 1325 bits (3430), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/765 (84%), Positives = 700/765 (91%), Gaps = 4/765 (0%) Query: 7 MIAQELEVSLHMAFVEARQSRHEFITVEHLLLALLDNPSAAEVLRACSVNIDDLRKTLTN 66 MIAQELEVSLHMAFVEARQ+RHEFITVEHLLLALLDNP+AAEVLRAC+ NI+DLR L N Sbjct: 1 MIAQELEVSLHMAFVEARQARHEFITVEHLLLALLDNPTAAEVLRACAANIEDLRTHLKN 60 Query: 67 FITDNTPTVPGTNEVDTQPTLGFQRVIQRAIMHVQSASNGKKEVTGANVLVAIFGEKDSH 126 FI DNTP VPGT+EVDTQPTLGFQRVIQRAIMHVQS SNGKKEVTGANVLVAIFGEKDSH Sbjct: 61 FIADNTPVVPGTDEVDTQPTLGFQRVIQRAIMHVQSTSNGKKEVTGANVLVAIFGEKDSH 120 Query: 127 AVYYLHQQGVTRLDVVNFISHGVRKDQQADPQKAPEGAEDVQAEGQQKESPLDQFTQNLN 186 AVYYL QQGVTRLDVVNFISHG+RKDQ A+P K G KESPL+QFTQNLN Sbjct: 121 AVYYLQQQGVTRLDVVNFISHGIRKDQ-AEPAKQ-GEGNPEGEGGDGKESPLEQFTQNLN 178 Query: 187 KAAAEGKIDPLIGRESEVERVIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAWRVTQGDVP 246 A GKIDPLIGRE EVERV+Q LCRRRKNNPLLVGEAGVGKTAIAEGLAWR+T+G+VP Sbjct: 179 ALAKAGKIDPLIGREQEVERVVQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRITKGEVP 238 Query: 247 EILKNAVVYSLDMGALLAGTKYRGDFEQRLKAVLKQLKDSPNGILFIDEIHTIIGAGSAS 306 +IL +VVYSLDMGALLAGTKYRGDFEQRLK VLK LKD+PN ILFIDEIHT+IGAG+AS Sbjct: 239 DILAKSVVYSLDMGALLAGTKYRGDFEQRLKGVLKSLKDNPNAILFIDEIHTLIGAGAAS 298 Query: 307 GGTLDASNLLKPALSSGQLKCIGATTYTEFRGVFEKDHALSRRFQKIDVNEPTVEQTVQI 366 GGTLDASNLLKPALSSG LKCIGATT+TE+RG+FEKD ALSRRFQKIDV EPTV+QTVQI Sbjct: 299 GGTLDASNLLKPALSSGALKCIGATTFTEYRGIFEKDAALSRRFQKIDVVEPTVDQTVQI 358 Query: 367 LRGLKSKFEEHHGVKYSASALTSAAELAARFINDRHLPDKAIDVIDEAGAAQRILPKSKQ 426 LRGLKS+FEEHHGVKY++SALT+AAEL+ARFI DRHLPDKAIDVIDEAGAAQRILPKSKQ Sbjct: 359 LRGLKSRFEEHHGVKYASSALTAAAELSARFITDRHLPDKAIDVIDEAGAAQRILPKSKQ 418 Query: 427 KKTIGKPEIEEIISKIARIPPQSVNQDDRAKLQTIDRDLKNVVFGQDPAIEALSSAIKMA 486 KKTIGK EIE I+S+IAR+PPQSV+QDDR+KLQT++RDLK+VVFGQDPAI+AL+SAIKM+ Sbjct: 419 KKTIGKGEIEVIVSRIARVPPQSVSQDDRSKLQTLERDLKSVVFGQDPAIDALASAIKMS 478 Query: 487 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELVRFDMSEYMERHAVSRLIGAP 546 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIEL+RFDMSEYMERHAVSRLIGAP Sbjct: 479 RAGLGKTDKPIGSFLFSGPTGVGKTEVAKQLAFILGIELIRFDMSEYMERHAVSRLIGAP 538 Query: 547 PGYVGFDQGGLLTEAVNKKPHAVLLLDEIEKAHPDIFNILLQVMDHGTLTDNNGRKTDFR 606 PGYVGFDQGGLLTEAV KKPH VLLLDEIEKAHPDIFNILLQVMDHG LTDNNGRK DFR Sbjct: 539 PGYVGFDQGGLLTEAVTKKPHCVLLLDEIEKAHPDIFNILLQVMDHGALTDNNGRKADFR 598 Query: 607 NVIIIMTTNAGAESLQKRTIGFTEKKEAGDEMADIKRMFTPEFRNRLDAIISFRPLDEEI 666 NVIIIMTTNAGAE++ K TIGFT +E GDEMADIKRMFTPEFRNRLDA ISFR LDEEI Sbjct: 599 NVIIIMTTNAGAETMNKATIGFTTAREQGDEMADIKRMFTPEFRNRLDATISFRSLDEEI 658 Query: 667 ILRVVDKFLMQLEEQLHEKKVEAVFSDSLRKFLGKKGFDPLMGARPMSRLIQDLIRKALA 726 I+RVVDKFLMQLEEQLHEKKV+A+F++ LR+FL KKGFDPLMGARPM RLIQDLIRKALA Sbjct: 659 IMRVVDKFLMQLEEQLHEKKVDAIFTEKLRRFLAKKGFDPLMGARPMQRLIQDLIRKALA 718 Query: 727 DELLFGKLVSGGRVTVEMDDKDQIKLEFPEGDDSSPPEEPQEKLE 771 DELLFGKLV+GG+V V++DD D +KLEF E + +PP QE+ E Sbjct: 719 DELLFGKLVNGGKVVVDLDDADAVKLEFSE--NEAPPAPAQEEAE 761