BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0031.p (431 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774811.1| cytochrome c protein [Herbaspirillum seroped... 869 0.0 ref|YP_004754064.1| putative diheme cytochrome c-553 [Collimonas... 485 e-135 ref|YP_001354762.1| cytochrome c [Janthinobacterium sp. Marseill... 481 e-133 ref|YP_001101061.1| putative cytochrome C [Herminiimonas arsenic... 466 e-129 ref|YP_004229430.1| gluconate 2-dehydrogenase (acceptor) [Burkho... 449 e-124 ref|ZP_02884571.1| Gluconate 2-dehydrogenase (acceptor) [Burkhol... 449 e-124 ref|YP_003908139.1| gluconate 2-dehydrogenase (acceptor) [Burkho... 449 e-124 gb|EFV81917.1| cytochrome C [Achromobacter xylosoxidans C54] 446 e-123 ref|YP_550256.1| class I cytochrome c [Polaromonas sp. JS666] >g... 446 e-123 ref|YP_001896924.1| gluconate 2-dehydrogenase [Burkholderia phyt... 445 e-123 >ref|YP_003774811.1| cytochrome c protein [Herbaspirillum seropedicae SmR1] gb|ADJ62903.1| cytochrome c protein [Herbaspirillum seropedicae SmR1] Length = 431 Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/431 (99%), Positives = 428/431 (99%) Query: 1 MKRTHFFKSLGVLAALLIALPAAVIGWQWLGPEERGAATPAPDPTHQLAQGQYLARAGNC 60 MKRTHFFKSLGVLAALLIALPAAVIGWQWLGPEERGAATPAPDPT QLAQGQYLARAGNC Sbjct: 1 MKRTHFFKSLGVLAALLIALPAAVIGWQWLGPEERGAATPAPDPTRQLAQGQYLARAGNC 60 Query: 61 MACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKEGQF 120 MACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKEGQF Sbjct: 61 MACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKEGQF 120 Query: 121 LYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYDQRMLLGLWRALYFTP 180 LYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQ H LRFPYDQRMLLGLWRALYFTP Sbjct: 121 LYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQAHTLRFPYDQRMLLGLWRALYFTP 180 Query: 181 QSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYAPPL 240 QSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYAPPL Sbjct: 181 QSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYAPPL 240 Query: 241 HGGADGLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYLKSLP 300 HGGADGLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYLKSLP Sbjct: 241 HGGADGLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYLKSLP 300 Query: 301 ASAADDAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRAIAGP 360 ASAADDAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRAIAGP Sbjct: 301 ASAADDAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRAIAGP 360 Query: 361 HPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGLVSAA 420 HPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGLVSAA Sbjct: 361 HPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGLVSAA 420 Query: 421 EVNRYRSVPLD 431 EVNRYRSVPLD Sbjct: 421 EVNRYRSVPLD 431 >ref|YP_004754064.1| putative diheme cytochrome c-553 [Collimonas fungivorans Ter331] gb|AEK63241.1| Putative diheme cytochrome c-553 [Collimonas fungivorans Ter331] Length = 431 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 230/388 (59%), Positives = 284/388 (73%), Gaps = 4/388 (1%) Query: 46 HQLAQGQYLARAGNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADD 105 Q+++G YL + G+CMACHTARGG AGGRAI +PFG +Y N+TPD+ TGIG WSADD Sbjct: 46 EQISRGAYLVQGGDCMACHTARGGKELAGGRAIQTPFGAIYAPNLTPDRETGIGSWSADD 105 Query: 106 FWRALHHGRGKEGQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYD 165 FW+ALH+G+ K+G LYPAFPYT+YT+++R+D+DA+FAYL+S+P V + N+ LRFPY+ Sbjct: 106 FWQALHNGKSKDGSLLYPAFPYTNYTKVTRSDADAMFAYLRSVPAVQQKNRQSDLRFPYN 165 Query: 166 QRMLLGLWRALYFTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLAL 225 R LL WRALYF P +YQ + RQ +WNRGAYLVQG GHCSACH+ RN LG + L Sbjct: 166 NRFLLYGWRALYFRPGTYQDETRQSVEWNRGAYLVQGLGHCSACHTTRNALGGTDLKADL 225 Query: 226 AGGVIPALQWYAPPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYL 284 GG IP + WYAP L + GL +W I LLK GVSP LGPM+E+VG SLQ+L Sbjct: 226 GGGFIPVVNWYAPSLTSDQEIGLGNWDIEHITGLLKNGVSPRGTVLGPMAEVVGASLQHL 285 Query: 285 NDADVSAMAVYLKSLPASAADDAARPAS-VEPAEAERIMKQGKQLYGTLCVDCHGGKGQG 343 +D DV AMAVYLKSLP +A+ P P E R+M+ G+++Y C+DCH G+G Sbjct: 286 SDQDVRAMAVYLKSLPRQ--KEASEPKERASPDEVARVMELGQKIYKNHCIDCHQASGKG 343 Query: 344 SAPDYPPLAGNRAIAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVV 403 P YPPLA N AI P P NA+R VLNGGF PSTA NP P+GMPP+GP LSD EVAAVV Sbjct: 344 QWPAYPPLASNHAITMPAPVNAIRVVLNGGFAPSTAANPRPYGMPPYGPALSDSEVAAVV 403 Query: 404 SYVRNSWGNQGGLVSAAEVNRYRSVPLD 431 SY+RNSWGN+ +VSAAEVNRYR+VPL+ Sbjct: 404 SYIRNSWGNKAPIVSAAEVNRYRAVPLE 431 >ref|YP_001354762.1| cytochrome c [Janthinobacterium sp. Marseille] gb|ABR90805.1| cytochrome c [Janthinobacterium sp. Marseille] Length = 428 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/431 (53%), Positives = 298/431 (69%), Gaps = 8/431 (1%) Query: 1 MKRTHFFKSLGVLAALLIALPAAVIGWQWL---GPEERGAATPAPDPTHQLAQGQYLARA 57 MKR + + +ALL+ + +GW + P+ A+ P DP QL QG+YLAR Sbjct: 1 MKRQYLLR----FSALLLGIITVFVGWLYWANRNPDLGQASVPPTDPAQQLVQGEYLARV 56 Query: 58 GNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKE 117 GNCM+CHT+RGG YAGGRA+ +PFG +YTSN+TPD TG+G+W+++DFW+A+H G+ K+ Sbjct: 57 GNCMSCHTSRGGESYAGGRAVPTPFGNIYTSNLTPDAETGLGKWNSNDFWQAMHDGKSKD 116 Query: 118 GQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYDQRMLLGLWRALY 177 G LYPAFPYT+YT+++RADSDA+FAYLQ+LP V++ N+ LRFPYD R+ L +WRALY Sbjct: 117 GSLLYPAFPYTNYTKVTRADSDAIFAYLQTLPAVSQQNRAPDLRFPYDNRVALYVWRALY 176 Query: 178 FTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYA 237 F P Y D +Q +WNRGAYL QG GHCSACHS R+ LG + L GG+IP L WYA Sbjct: 177 FRPGQYANDDKQSVEWNRGAYLAQGLGHCSACHSPRDALGGTDLKAELGGGMIPVLNWYA 236 Query: 238 PPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYL 296 PPL+G A L +W T +AAL+KTG +P GPM+E+V SLQY D D+ AMA+YL Sbjct: 237 PPLNGDAQTSLGNWETEHLAALMKTGTAPSRSVSGPMAEVVFGSLQYAKDEDIKAMALYL 296 Query: 297 KSLPASAADDAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRA 356 KSLP A SV + ++K G +LY C CH G+G A YP LAG+RA Sbjct: 297 KSLPQQIPAPVAAAESVPDETKKNMIKAGAKLYENQCASCHQESGKGVAAIYPALAGSRA 356 Query: 357 IAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGL 416 I P NA+R VL+GG+ PSTAGNP P+GMPPFG ++D+EVA+VV+Y+RNSWGNQ Sbjct: 357 ITTPVATNAIRMVLHGGYAPSTAGNPRPYGMPPFGHSMTDEEVASVVTYIRNSWGNQATA 416 Query: 417 VSAAEVNRYRS 427 VS +VNRYRS Sbjct: 417 VSPNDVNRYRS 427 >ref|YP_001101061.1| putative cytochrome C [Herminiimonas arsenicoxydans] emb|CAL62940.1| Cytochrome c, class I precursor [Herminiimonas arsenicoxydans] Length = 429 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/431 (52%), Positives = 294/431 (68%), Gaps = 8/431 (1%) Query: 1 MKRTHFFKSLGVLAALLIALPAAVIGWQWLG---PEERGAATPAPDPTHQLAQGQYLARA 57 MKR + +++L +L +LI AVI W LG P+ + P +P Q+ QG+YLAR Sbjct: 1 MKRKYVWRTLALLLTVLII---AVI-WLILGNRNPDLDQPSVPPANPDEQIRQGEYLARI 56 Query: 58 GNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKE 117 GNCM+CHTARGG YAGGRA+ +PFGT+YTSN+TPD TG+G+WS DFW+A+H G+ K+ Sbjct: 57 GNCMSCHTARGGESYAGGRAVPTPFGTIYTSNLTPDAETGLGKWSNADFWQAMHDGKSKD 116 Query: 118 GQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYDQRMLLGLWRALY 177 G LYPAFPYT+YTR++RADSDA+FAYLQ+LP V + N LRFPYD R LL +WRALY Sbjct: 117 GSLLYPAFPYTNYTRVTRADSDAIFAYLQTLPTVQKKNIAPELRFPYDNRALLYVWRALY 176 Query: 178 FTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYA 237 F P Y D +Q +WNRGAYL QG GHCSACHS R+ G + L GG+IP L WYA Sbjct: 177 FRPGQYTNDDKQSVEWNRGAYLAQGLGHCSACHSPRDSFGGTDVKSELGGGMIPVLNWYA 236 Query: 238 PPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYL 296 PPL+G + L +W +AAL+KTGV+P GPM+E+V SLQ+++ D A+A YL Sbjct: 237 PPLNGDRETSLGNWEVEHLAALMKTGVAPQRSVSGPMAEVVAGSLQHMHKDDAHALAGYL 296 Query: 297 KSLPASAADDAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRA 356 KSLP +A ++ + ++ G +LY C+ CH G+G YP LAG+RA Sbjct: 297 KSLPQQSAAPLVAAETMREESKQAMIDAGAKLYEDQCISCHQASGKGVPSIYPALAGSRA 356 Query: 357 IAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGL 416 I P NA+R VL GG+ PST GNP P+GMPPFG ++D+EVAAVV+Y+RN+WGNQG Sbjct: 357 ITTPVATNAIRMVLYGGYAPSTGGNPRPYGMPPFGQSMTDEEVAAVVTYIRNAWGNQGTA 416 Query: 417 VSAAEVNRYRS 427 + +VNRYRS Sbjct: 417 ILPNDVNRYRS 427 >ref|YP_004229430.1| gluconate 2-dehydrogenase (acceptor) [Burkholderia sp. CCGE1001] gb|ADX56370.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia sp. CCGE1001] Length = 432 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 211/398 (53%), Positives = 281/398 (70%), Gaps = 6/398 (1%) Query: 37 AATPAPDPTHQLAQGQYLARAGNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTT 96 AATPA D + +G+YLARAG+C+ACHT RGG +AGG +A+PFGT++T NITPD Sbjct: 38 AATPA-DQAALVKKGEYLARAGDCIACHTVRGGKQFAGGLPMATPFGTMFTPNITPDDQY 96 Query: 97 GIGQWSADDFWRALHHGRGKEGQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQ 156 GIG+W+ DDF+RA+H GR K+G LYP FP+TSYT+++RADSDA++AYL+S+PPVA ++ Sbjct: 97 GIGKWTQDDFYRAMHTGRSKDGSLLYPGFPFTSYTKVTRADSDAIYAYLRSIPPVAVPSR 156 Query: 157 THALRFPYDQRMLLGLWRALYFTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRL 216 H L+FP++QR +L WR L+F Y+PDP + +WNRGAYL++G GHC CH++ N + Sbjct: 157 PHELKFPFNQRNMLIGWRTLFFREGEYKPDPTKSVEWNRGAYLIEGLGHCGMCHTSINAM 216 Query: 217 GASIEPLALAGGVIPALQWYAPPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSE 275 G + A AGG+IP WYAP L + GL DW T DIA LLKTGVS GPM+E Sbjct: 217 GGPVSSAAFAGGLIPLQNWYAPSLTSNKEAGLGDWETKDIADLLKTGVSNRGAVFGPMAE 276 Query: 276 IVGRSLQYLNDADVSAMAVYLKSLPASAADDAARPASVEPAE--AERIMKQGKQLYGTLC 333 +V SLQY++DAD++AMA YLK++P + +A P +E +E ++KQG+++Y C Sbjct: 277 VVHNSLQYMSDADINAMATYLKTIPQKS--EAPEPMQLETSEKFGGELLKQGQKIYADNC 334 Query: 334 VDCHGGKGQGSAPDYPPLAGNRAIAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQ 393 CH G G P +PPLA N++I P N +R VLNGG+PPST NP+P+GMPPF Sbjct: 335 AKCHADNGLGMPPAFPPLANNQSIQMPSAVNPIRMVLNGGYPPSTDANPHPYGMPPFAQS 394 Query: 394 LSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRYRSVPLD 431 LS+QEVAAVV+Y+R SWGN G VS +V+ RS PLD Sbjct: 395 LSNQEVAAVVTYIRMSWGNHGTAVSPQQVSDLRSAPLD 432 >ref|ZP_02884571.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia graminis C4D1M] gb|EDT09736.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia graminis C4D1M] Length = 432 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 211/398 (53%), Positives = 281/398 (70%), Gaps = 6/398 (1%) Query: 37 AATPAPDPTHQLAQGQYLARAGNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTT 96 AATPA D + +G+YLARAG+C+ACHT RGG +AGG +A+PFGT++T NITPD Sbjct: 38 AATPA-DQAALVKKGEYLARAGDCIACHTVRGGKQFAGGLPMATPFGTMFTPNITPDDQY 96 Query: 97 GIGQWSADDFWRALHHGRGKEGQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQ 156 GIG+W+ DDF+RA+H GR K+G LYP FP+TSYT+++RADSDA++AYL+S+PPVA ++ Sbjct: 97 GIGKWTQDDFYRAMHTGRSKDGSLLYPGFPFTSYTKVTRADSDAIYAYLRSVPPVAVPSR 156 Query: 157 THALRFPYDQRMLLGLWRALYFTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRL 216 H L+FP++QR +L WR L+F Y+PDP + +WNRGAYL++G GHC CH++ N + Sbjct: 157 PHELKFPFNQRNMLIGWRTLFFREGEYKPDPTKSVEWNRGAYLIEGLGHCGMCHTSINAM 216 Query: 217 GASIEPLALAGGVIPALQWYAPPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSE 275 G + A AGG+IP WYAP L + GL DW T DIA LLKTGVS GPM+E Sbjct: 217 GGPVSSAAFAGGLIPLQNWYAPSLTSNKEAGLGDWETKDIADLLKTGVSNRGAVFGPMAE 276 Query: 276 IVGRSLQYLNDADVSAMAVYLKSLPASAADDAARPASVEPAE--AERIMKQGKQLYGTLC 333 +V SLQY++DAD++AMA YLK++P + +A P +E +E ++KQG+++Y C Sbjct: 277 VVHNSLQYMSDADINAMATYLKTIPQKS--EAPEPMQLETSEKFGGELLKQGQKIYADNC 334 Query: 334 VDCHGGKGQGSAPDYPPLAGNRAIAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQ 393 CH G G P +PPLA N++I P N +R VLNGG+PPST NP+P+GMPPF Sbjct: 335 AKCHADNGLGMPPAFPPLANNQSIQMPSAVNPIRMVLNGGYPPSTDANPHPYGMPPFAQS 394 Query: 394 LSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRYRSVPLD 431 LS+QEVAAVV+Y+R SWGN G VS +V+ RS PLD Sbjct: 395 LSNQEVAAVVTYIRMSWGNHGTAVSPQQVSDLRSAPLD 432 >ref|YP_003908139.1| gluconate 2-dehydrogenase (acceptor) [Burkholderia sp. CCGE1003] gb|ADN58848.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia sp. CCGE1003] Length = 432 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 211/398 (53%), Positives = 279/398 (70%), Gaps = 6/398 (1%) Query: 37 AATPAPDPTHQLAQGQYLARAGNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTT 96 AATPA D + +G+YLARAG+C+ACHT RGG +AGG +A+PFGT++T NITPD Sbjct: 38 AATPA-DQAALVKKGEYLARAGDCIACHTVRGGKQFAGGLPMATPFGTMFTPNITPDDQY 96 Query: 97 GIGQWSADDFWRALHHGRGKEGQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQ 156 GIG+W+ DDF+RA+H GR K+G LYP FP+TSYT+++RADSDA++AYL+S+PPVA ++ Sbjct: 97 GIGKWTQDDFYRAMHTGRSKDGSLLYPGFPFTSYTKVTRADSDAIYAYLRSIPPVAVPSR 156 Query: 157 THALRFPYDQRMLLGLWRALYFTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRL 216 H L+FP++QR +L WR L+F Y+PDP + +WNRGAYL++G GHC CH++ N + Sbjct: 157 PHELKFPFNQRNMLIGWRTLFFREGEYKPDPTKSVEWNRGAYLIEGLGHCGMCHTSINAM 216 Query: 217 GASIEPLALAGGVIPALQWYAPPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSE 275 G + A AGG+IP WYAP L + GL DW T DIA LLKTGVS GPM+E Sbjct: 217 GGPVSSAAFAGGLIPLQNWYAPSLTSNKEAGLGDWETKDIADLLKTGVSNRGAVFGPMAE 276 Query: 276 IVGRSLQYLNDADVSAMAVYLKSLPASAADDAARPASVEPAE--AERIMKQGKQLYGTLC 333 +V SLQY+ DAD++AMA YLK++P + +A P +E +E ++KQG+++Y C Sbjct: 277 VVHNSLQYMTDADINAMATYLKTIPQKS--EAPEPMQLETSEKFGGELLKQGQKIYADNC 334 Query: 334 VDCHGGKGQGSAPDYPPLAGNRAIAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQ 393 CH G G P +PPLA N++I P N +R VLNGG+PPST NP+P+GMPPF Sbjct: 335 AKCHADNGLGMPPAFPPLANNQSIQMPSAVNPIRMVLNGGYPPSTEANPHPYGMPPFAQS 394 Query: 394 LSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRYRSVPLD 431 LS+QEVAAVV+Y+R SWGN G VS +V RS PLD Sbjct: 395 LSNQEVAAVVTYIRMSWGNHGTAVSPQQVADLRSAPLD 432 >gb|EFV81917.1| cytochrome C [Achromobacter xylosoxidans C54] Length = 427 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 232/422 (54%), Positives = 289/422 (68%), Gaps = 7/422 (1%) Query: 8 KSLGVLAALLIALPAAVIGWQWLGPEERGAATPAP-DPTHQLAQGQYLARAGNCMACHTA 66 + LG+L AL + L ++ WQ + T AP DP ++ +G+YLA AGNCMACHTA Sbjct: 6 RLLGILLALAV-LAVGILYWQGTRDDASTGPTEAPADPQQRIERGRYLALAGNCMACHTA 64 Query: 67 RGGAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKEGQFLYPAFP 126 RGG YAGG AI +PFGT+Y NITPD+ TGIG WSADDFW+ALH+G+ ++G LYPAFP Sbjct: 65 RGGQAYAGGTAIPTPFGTIYGPNITPDEKTGIGAWSADDFWQALHNGKSRDGTLLYPAFP 124 Query: 127 YTSYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYDQRMLLGLWRALYFTPQSYQPD 186 YT YTR++RADSDALFAYL+++ PV R ++ L FPYDQ +LL WRALYF P + D Sbjct: 125 YTEYTRVTRADSDALFAYLRTVTPVERPSRAPELDFPYDQSILLAAWRALYFRPGVQEAD 184 Query: 187 PRQDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYAPPLHGG-AD 245 P Q QWNRG YLV+G GHC+ACH+ RN LGA+ LAGG+IP L WYAPPL Sbjct: 185 PGQSTQWNRGRYLVEGLGHCAACHAPRNSLGATRAADGLAGGIIPMLDWYAPPLTNNPQT 244 Query: 246 GLQDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYLKSLPASAAD 305 GL WS DIAALL+TG++ H+ GPM+E+V S Q+L+DAD AM VYLKSLP++ A Sbjct: 245 GLGRWSAEDIAALLRTGIAAHSSASGPMAEVVLGSTQHLSDADALAMGVYLKSLPSTPAP 304 Query: 306 DAARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRAIAGPHPANA 365 A A A M+ G ++Y C CH G+GSA +P LAGN + P P NA Sbjct: 305 A----AVASAAVAPAAMELGGKIYRQQCAQCHQPAGEGSAGAWPALAGNPTVTAPSPLNA 360 Query: 366 VRAVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRY 425 +R VL+GGF P+TA NP P GMPPFG L+D +VA +VSY+RNSWGNQ G V+ EV R Sbjct: 361 IRMVLDGGFAPATAANPRPHGMPPFGQLLNDNDVAMLVSYIRNSWGNQAGGVTPLEVKRA 420 Query: 426 RS 427 R+ Sbjct: 421 RA 422 >ref|YP_550256.1| class I cytochrome c [Polaromonas sp. JS666] gb|ABE45358.1| cytochrome c, class I [Polaromonas sp. JS666] Length = 428 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 228/420 (54%), Positives = 283/420 (67%), Gaps = 7/420 (1%) Query: 12 VLAALLIALPAAVIGWQWLGPEERGAATP---APDPTHQLAQGQYLARAGNCMACHTARG 68 VLA L+ A + W +E P A +A+G YLARAGNCM CHTARG Sbjct: 8 VLAVSLLVAGLAALVWTLNVRDEVDVKAPMATAGASDSLIARGAYLARAGNCMTCHTARG 67 Query: 69 GAPYAGGRAIASPFGTLYTSNITPDKTTGIGQWSADDFWRALHHGRGKEGQFLYPAFPYT 128 G YAGG IA+PFGT++TSN+TPD TGIG WS+ FWRA+H+GR K G+ LYPAFPY Sbjct: 68 GQNYAGGLGIATPFGTVFTSNLTPDDKTGIGTWSSAHFWRAMHNGRSKSGRLLYPAFPYP 127 Query: 129 SYTRLSRADSDALFAYLQSLPPVARANQTHALRFPYDQRMLLGLWRALYFTPQSYQPDPR 188 SYT+ +R DSDA+FAYL SLP VA+ N+ H LRFPY + L +WRALYF P Y+PD R Sbjct: 128 SYTQATREDSDAIFAYLNSLPAVAQPNRPHELRFPYQSQAALAVWRALYFKPGVYEPDTR 187 Query: 189 QDAQWNRGAYLVQGAGHCSACHSARNRLGASIEPLALAGGVIPALQWYAPPLHGGAD-GL 247 + A WNRGAYLV+G GHCSACH+ARN +GAS E + LAGG+IP WYAP L A+ G+ Sbjct: 188 RSADWNRGAYLVKGLGHCSACHTARNVMGASDEGVDLAGGLIPMQNWYAPSLASSAEAGV 247 Query: 248 QDWSTADIAALLKTGVSPHAVTLGPMSEIVGRSLQYLNDADVSAMAVYLKSLPASAADDA 307 +W I +LLK GVSP A GPM+E+V RS QYL+D D+ AMA++LK L A+ + + Sbjct: 248 GEWDREHIVSLLKNGVSPRASATGPMAEVVLRSTQYLSDDDLGAMALFLKELAAAPSANG 307 Query: 308 ARPASVEPAEAERIMKQGKQLYGTLCVDCHGGKGQGSAPDYPPLAGNRAIAGPHPANAVR 367 PAS PA +G +LY C CHG KGQG YP LAGNRA+ P N V+ Sbjct: 308 TAPASGTPAIPG---ARGAKLYELHCAQCHGAKGQGVPHAYPALAGNRAVTMPSGVNLVQ 364 Query: 368 AVLNGGFPPSTAGNPYPFGMPPFGPQLSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRYRS 427 VLNGG+ P+TAGNP P+GMPPF L D E+AAV++++R SWGNQ ++ EVNR R+ Sbjct: 365 IVLNGGYAPATAGNPRPYGMPPFVLVLGDSEIAAVLTHIRGSWGNQASEITPIEVNRMRA 424 >ref|YP_001896924.1| gluconate 2-dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD17700.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia phytofirmans PsJN] Length = 432 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 210/398 (52%), Positives = 279/398 (70%), Gaps = 6/398 (1%) Query: 37 AATPAPDPTHQLAQGQYLARAGNCMACHTARGGAPYAGGRAIASPFGTLYTSNITPDKTT 96 AATPA D + QG+YLARAG+C+ACHT RGG +AGG +A+PFGT++T NITPD Sbjct: 38 AATPA-DQAALIKQGEYLARAGDCIACHTVRGGKQFAGGLPMATPFGTMFTPNITPDDQY 96 Query: 97 GIGQWSADDFWRALHHGRGKEGQFLYPAFPYTSYTRLSRADSDALFAYLQSLPPVARANQ 156 GIG+W+ DDF+RA+H GR K+G LYP FP+TSYT+++RADSDA++AYL+S+ PV ++ Sbjct: 97 GIGKWTQDDFYRAMHTGRSKDGSLLYPGFPFTSYTKVTRADSDAIYAYLRSVTPVNVPSR 156 Query: 157 THALRFPYDQRMLLGLWRALYFTPQSYQPDPRQDAQWNRGAYLVQGAGHCSACHSARNRL 216 H L+FP++QR +L WR L+F Y+PDP + +WNRGAYL++G GHC CH++ N + Sbjct: 157 PHELKFPFNQRNMLIGWRTLFFREGEYKPDPTKSVEWNRGAYLIEGLGHCGMCHTSINAM 216 Query: 217 GASIEPLALAGGVIPALQWYAPPLHGGAD-GLQDWSTADIAALLKTGVSPHAVTLGPMSE 275 G + A AGG+IP WYAP L + GL DW T DIA LLKTGVS GPM+E Sbjct: 217 GGPVSSAAFAGGLIPLQNWYAPSLTSNKEAGLGDWETKDIADLLKTGVSNRGAVFGPMAE 276 Query: 276 IVGRSLQYLNDADVSAMAVYLKSLPASAADDAARPASVEPAE--AERIMKQGKQLYGTLC 333 +V SLQY++DAD++AMA YLK++P + +A P +E +E ++KQG+++Y C Sbjct: 277 VVHNSLQYMSDADINAMATYLKTIPQKS--EAPEPLQLETSEKFGGELLKQGQKIYADNC 334 Query: 334 VDCHGGKGQGSAPDYPPLAGNRAIAGPHPANAVRAVLNGGFPPSTAGNPYPFGMPPFGPQ 393 CH G G P +PPLA N++I P N +R VLNGG+PPST NP+P+GMPPF Sbjct: 335 AKCHAENGLGMPPAFPPLANNQSIQMPSAVNPIRMVLNGGYPPSTDANPHPYGMPPFAQA 394 Query: 394 LSDQEVAAVVSYVRNSWGNQGGLVSAAEVNRYRSVPLD 431 LS+QEVAAVV+Y+R SWGN G VS +V+ RS PLD Sbjct: 395 LSNQEVAAVVTYIRMSWGNHGTAVSPQQVSDLRSAPLD 432