BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0016.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774797.1| hypothetical protein Hsero_1373 [Herbaspiril... 392 e-107 ref|YP_001860025.1| hypothetical protein Bphy_3848 [Burkholderia... 237 8e-61 ref|YP_553092.1| hypothetical protein Bxe_B2244 [Burkholderia xe... 236 1e-60 ref|YP_002909096.1| hypothetical protein bglu_2g15040 [Burkholde... 236 1e-60 ref|YP_003606931.1| hypothetical protein BC1002_3386 [Burkholder... 236 2e-60 ref|YP_001889712.1| hypothetical protein Bphyt_6009 [Burkholderi... 235 2e-60 ref|ZP_06844073.1| protein of unknown function UPF0029 [Burkhold... 234 5e-60 ref|YP_002261153.1| protein of unknown function upf0029 [Ralston... 234 6e-60 ref|YP_299303.1| hypothetical protein Reut_B5111 [Ralstonia eutr... 234 6e-60 ref|ZP_03267735.1| protein of unknown function UPF0029 [Burkhold... 233 8e-60 >ref|YP_003774797.1| hypothetical protein Hsero_1373 [Herbaspirillum seropedicae SmR1] gb|ADJ62889.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 196 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/196 (99%), Positives = 196/196 (100%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ Sbjct: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK Sbjct: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLA+LHLRLPEAALAQAE Sbjct: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAYLHLRLPEAALAQAE 180 Query: 181 EAIRRLSSNAEIKRII 196 EAIRRLSSNAEIKRII Sbjct: 181 EAIRRLSSNAEIKRII 196 >ref|YP_001860025.1| hypothetical protein Bphy_3848 [Burkholderia phymatum STM815] gb|ACC72979.1| protein of unknown function UPF0029 [Burkholderia phymatum STM815] Length = 290 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 148/194 (76%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + TFTL ++ ELEIRKSRFI +PV R+AAM E+ R+R+AH +ATHVCWAL+AGGQ Sbjct: 94 LPTFTLPSALQAELEIRKSRFIAYAIPVADRDAAMDELRRLREAHPAATHVCWALLAGGQ 153 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIA+AL+ Sbjct: 154 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIATALQ 213 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+A A LEI + Y+ E ++R W+ Q+ + L S + L +R+P A+ A Sbjct: 214 DAPRVERIALASLEIEIGYADEARVRRWIEQENHVLEASAYGMSVQLTIRMPVTAIDGAR 273 Query: 181 EAIRRLSSNAEIKR 194 EA+R ++ + R Sbjct: 274 EALRDMTQGRAVFR 287 >ref|YP_553092.1| hypothetical protein Bxe_B2244 [Burkholderia xenovorans LB400] gb|ABE33742.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 194 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 115/183 (62%), Positives = 140/183 (76%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 M T+TL + ELEIRKSRFI +PV R+AAM E+ R+RD H +ATHVCWAL+AGGQ Sbjct: 1 MPTYTLPAPLSAELEIRKSRFIAYAIPVADRDAAMAELRRLRDEHPAATHVCWALLAGGQ 60 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIASAL Sbjct: 61 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIASALL 120 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+AQ L + V Y+ E ++R W+ + Y L DS + L + +RLP A+ A+ Sbjct: 121 DAPRVERIAQVSLTVEVSYADEAKVRRWIDAEGYTLADSAYAMLVKMTIRLPVNAVDAAQ 180 Query: 181 EAI 183 A+ Sbjct: 181 RAL 183 >ref|YP_002909096.1| hypothetical protein bglu_2g15040 [Burkholderia glumae BGR1] gb|ACR31861.1| Hypothetical protein bglu_2g15040 [Burkholderia glumae BGR1] Length = 196 Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 118/182 (64%), Positives = 140/182 (76%) Query: 3 TFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQSG 62 T+TLAQ E+EIRKSRFI +PV R+AAM E+ R+RDAH +ATHVCWAL+AGGQSG Sbjct: 2 TYTLAQTCTQEIEIRKSRFIAQAIPVADRDAAMAELQRLRDAHPAATHVCWALLAGGQSG 61 Query: 63 MSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALKQA 122 MSDDGEPSGTAGRP+LEVLRHH+LDGVLA V+RY+GGVKLGAGGLVRAYTDAIA AL A Sbjct: 62 MSDDGEPSGTAGRPILEVLRHHDLDGVLAAVIRYYGGVKLGAGGLVRAYTDAIAGALLGA 121 Query: 123 QRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAEEA 182 QR+ER+A A L I + Y E ++R W+ Q ELLDS + L +RLP +A A E Sbjct: 122 QRVERIALARLAIEIGYPDEARVRRWIEQSGAELLDSAYGMTVRLVVRLPVTEVAAARET 181 Query: 183 IR 184 +R Sbjct: 182 LR 183 >ref|YP_003606931.1| hypothetical protein BC1002_3386 [Burkholderia sp. CCGE1002] gb|ADG17420.1| protein of unknown function UPF0029 [Burkholderia sp. CCGE1002] Length = 213 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/187 (60%), Positives = 141/187 (75%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + T+TL + ELEIRKSRFI +PV R+AAM E+ R+RD H +ATHVCWAL+AGGQ Sbjct: 20 LPTYTLPAPLSAELEIRKSRFIAYALPVAARDAAMAELQRLRDEHPAATHVCWALLAGGQ 79 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIASAL Sbjct: 80 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIASALL 139 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+AQ L + V Y+ E ++R W+ + Y L+DS + L + +R+P AL A Sbjct: 140 DAPRVERIAQVSLGVEVSYADEAKVRRWMDAEGYALVDSAYGMLVKMTMRVPANALDAAR 199 Query: 181 EAIRRLS 187 + ++ Sbjct: 200 ATLTDIT 206 >ref|YP_001889712.1| hypothetical protein Bphyt_6009 [Burkholderia phytofirmans PsJN] gb|ACD20341.1| protein of unknown function UPF0029 [Burkholderia phytofirmans PsJN] Length = 239 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 115/183 (62%), Positives = 141/183 (77%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + T+TL + ELEIRKSRFI +PV R+AAM E+ R+RD H +ATHVCWAL+AGGQ Sbjct: 46 LPTYTLPAPLSAELEIRKSRFIAYAIPVADRDAAMAELRRLRDEHPAATHVCWALLAGGQ 105 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIASAL Sbjct: 106 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIASALL 165 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+AQ L + V Y+ E ++R W+ + Y L+DS + L + +RLP AL A+ Sbjct: 166 DAPRVERIAQVSLTVEVSYADEAKVRRWIDAEGYALVDSAYAMLVKMTIRLPINALDDAQ 225 Query: 181 EAI 183 A+ Sbjct: 226 RAL 228 >ref|ZP_06844073.1| protein of unknown function UPF0029 [Burkholderia sp. Ch1-1] gb|EFG68233.1| protein of unknown function UPF0029 [Burkholderia sp. Ch1-1] Length = 250 Score = 234 bits (597), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 114/183 (62%), Positives = 141/183 (77%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + T+TL + ELEIRKSRFI +PV R+AAM E+ R+RD H +ATHVCWAL+AGGQ Sbjct: 57 LPTYTLPAPLSAELEIRKSRFIAYAIPVADRDAAMAELRRLRDEHPAATHVCWALLAGGQ 116 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIASAL Sbjct: 117 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIASALL 176 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+AQ L + V Y+ E ++R W+ + Y L+DS + L + +RLP A+ A+ Sbjct: 177 DAPRVERIAQVSLTVEVSYADEAKVRRWIDAEGYALMDSAYAMLVKMTIRLPVNAVDNAQ 236 Query: 181 EAI 183 A+ Sbjct: 237 RAL 239 >ref|YP_002261153.1| protein of unknown function upf0029 [Ralstonia solanacearum IPO1609] emb|CAQ17948.1| protein of unknown function upf0029 [Ralstonia solanacearum MolK2] emb|CAQ63098.1| protein of unknown function upf0029 [Ralstonia solanacearum IPO1609] Length = 195 Score = 234 bits (597), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 117/187 (62%), Positives = 140/187 (74%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 M T+TL V ELEIRKSRFIG+ +PV R AAM IAR+R H +ATHVCWAL+AGGQ Sbjct: 1 MPTYTLRAPVTAELEIRKSRFIGLAVPVEDRAAAMDVIARLRAEHPTATHVCWALLAGGQ 60 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDG L VVRYFGGVKLGAGGLVRAYTDAIA+AL Sbjct: 61 SGMSDDGEPSGTAGRPILEVLRHHDLDGTLGAVVRYFGGVKLGAGGLVRAYTDAIATALT 120 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 +A+RIER+A+ L + Y+ E ++R WL Y L+D+ +D L +RLP A A Sbjct: 121 RAERIERIARTTLTLVTDYADEARIRRWLEDAGYVLVDAAYDAGVTLAVRLPVTDEAAAR 180 Query: 181 EAIRRLS 187 E +R L+ Sbjct: 181 ETLRDLT 187 >ref|YP_299303.1| hypothetical protein Reut_B5111 [Ralstonia eutropha JMP134] gb|AAZ64459.1| Protein of unknown function UPF0029 [Ralstonia eutropha JMP134] Length = 213 Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 117/187 (62%), Positives = 145/187 (77%), Gaps = 3/187 (1%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + T+TLA V+ ELEIRKSRF+ + +PVP R+AAM + +R H +ATHVCWAL+AGGQ Sbjct: 8 LPTYTLAAPVDAELEIRKSRFLALAIPVPDRDAAMAVLQSLRAQHPAATHVCWALLAGGQ 67 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIA+ALK Sbjct: 68 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIAAALK 127 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWL---AQQKYELLDSRHDTLAHLHLRLPEAALA 177 A+R+ER+A AEL + V Y+ EP++R WL AQ L D+ + +A L +RLP Sbjct: 128 SAERVERIAYAELAVEVDYADEPRVRRWLEQAAQDGCTLADTAYGAMARLVIRLPANQRD 187 Query: 178 QAEEAIR 184 A+ A+R Sbjct: 188 AAQAALR 194 >ref|ZP_03267735.1| protein of unknown function UPF0029 [Burkholderia sp. H160] gb|EEA00692.1| protein of unknown function UPF0029 [Burkholderia sp. H160] Length = 217 Score = 233 bits (595), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 113/183 (61%), Positives = 139/183 (75%) Query: 1 MATFTLAQRVEIELEIRKSRFIGIVMPVPGREAAMQEIARMRDAHRSATHVCWALMAGGQ 60 + T+TL + ELEIRKSRFI +PV R+AAM E+ R+RD H +ATHVCWAL+AGGQ Sbjct: 24 LPTYTLPAPLSAELEIRKSRFIAHAIPVADRDAAMAELQRLRDEHPAATHVCWALLAGGQ 83 Query: 61 SGMSDDGEPSGTAGRPMLEVLRHHELDGVLAMVVRYFGGVKLGAGGLVRAYTDAIASALK 120 SGMSDDGEPSGTAGRP+LEVLRHH+LDGVLA VVRY+GGVKLGAGGLVRAYTDAIASAL Sbjct: 84 SGMSDDGEPSGTAGRPILEVLRHHDLDGVLAAVVRYYGGVKLGAGGLVRAYTDAIASALL 143 Query: 121 QAQRIERVAQAELEIGVVYSAEPQLRHWLAQQKYELLDSRHDTLAHLHLRLPEAALAQAE 180 A R+ER+AQ L + V Y+ E ++R W+ + Y L+DS + L + +R+P AL A Sbjct: 144 DAPRVERIAQVSLSVEVTYADEAKVRRWMDAEGYALVDSAYGMLVKMTMRVPANALDDAR 203 Query: 181 EAI 183 + Sbjct: 204 RTL 206