BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0007.0008.p (922 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774789.1| two component hybrid sensor histidine kinase... 1822 0.0 ref|YP_004350682.1| ATP-binding region, ATPase-like protein [Bur... 598 e-168 ref|YP_002909869.1| ATPase-like protein [Burkholderia glumae BGR... 584 e-164 gb|EGP42966.1| ATP-binding region, ATPase-like protein [Achromob... 520 e-145 gb|EFV85400.1| hypothetical protein HMPREF0005_04492 [Achromobac... 488 e-135 ref|YP_569644.1| ATPase-like ATP-binding protein [Rhodopseudomon... 347 6e-93 ref|YP_004380953.1| integral membrane sensor hybrid histidine pr... 323 1e-85 ref|ZP_08404277.1| integral membrane sensor hybrid histidine pro... 308 4e-81 ref|YP_004352071.1| histidine kinase, Hybrid [Pseudomonas brassi... 290 1e-75 ref|YP_002801227.1| integral membrane sensor hybrid histidine pr... 246 2e-62 >ref|YP_003774789.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62881.1| two component hybrid sensor histidine kinase/response regulator protein [Herbaspirillum seropedicae SmR1] Length = 916 Score = 1822 bits (4720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 909/916 (99%), Positives = 913/916 (99%) Query: 7 LRRAHGRALRMMRALLLTLALGLVHAPRAGALSIDFAQVGEAATITSALWLLHDPGAHLG 66 +RRAHG ALRMMRALLLTLALGLVHAPRAGALSIDFAQVGEAATITSALWLLHDPGAHLG Sbjct: 1 MRRAHGPALRMMRALLLTLALGLVHAPRAGALSIDFAQVGEAATITSALWLLHDPGAHLG 60 Query: 67 VQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLL 126 VQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLL Sbjct: 61 VQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLL 120 Query: 127 DTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDIS 186 DTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDIS Sbjct: 121 DTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDIS 180 Query: 187 VALWEPAAMRQEEGRELAIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYI 246 VALWEPAAMRQEEGRELAIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYI Sbjct: 181 VALWEPAAMRQEEGRELAIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYI 240 Query: 247 CAFQGYLYRYLLEAGSPWIVHAPATLGCLATLIYLRMSQSLVELERLWRWKTLYRCMILA 306 CAFQGYLYRYLLEAGSPWIVHAPATLGCLATLIYLRMSQSLVELE+LWRWKTLYRCMILA Sbjct: 241 CAFQGYLYRYLLEAGSPWIVHAPATLGCLATLIYLRMSQSLVELEQLWRWKTLYRCMILA 300 Query: 307 LGAVTLWTALGDYRDAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAM 366 LG VTLWTALGDYRDAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAM Sbjct: 301 LGGVTLWTALGDYRDAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAM 360 Query: 367 SMKMLELNGVFDGDLLPDWRFAALFQIGLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRV 426 SMKMLELNGVFDGDLLPDWRFAALFQIGLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRV Sbjct: 361 SMKMLELNGVFDGDLLPDWRFAALFQIGLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRV 420 Query: 427 REQLKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASG 486 REQLKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASG Sbjct: 421 REQLKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASG 480 Query: 487 GPHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQPTPLYLHALLQEIAQEGQVLAQR 546 GPHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQPTPLYLHALLQEIAQEGQVLAQR Sbjct: 481 GPHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQPTPLYLHALLQEIAQEGQVLAQR 540 Query: 547 QHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKG 606 QHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKG Sbjct: 541 QHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKG 600 Query: 607 ALQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQ 666 ALQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQ Sbjct: 601 ALQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQ 660 Query: 667 PGMGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQL 726 PGMGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQL Sbjct: 661 PGMGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQL 720 Query: 727 SSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPV 786 SSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPV Sbjct: 721 SSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPV 780 Query: 787 LLLSATLHACELELDGDLRFDGSLLKPVNFSELQEMIARLLQLPLLGSTASSASSGGSVG 846 LLLSATLHACE+ELDGDLRFDGSLLKPVNFSELQEMIA+LLQLPLLGSTASSASSGGSVG Sbjct: 781 LLLSATLHACEVELDGDLRFDGSLLKPVNFSELQEMIAQLLQLPLLGSTASSASSGGSVG 840 Query: 847 EVVAMPPEALLQAALAMIADGAVSDLIDWCETLGHEHPQCSQFQAQALEQISQGHLARLR 906 EVVAMPPEALLQAALAMIADGAVSDLIDWCETLGHEHPQCSQFQAQALEQISQGHLARLR Sbjct: 841 EVVAMPPEALLQAALAMIADGAVSDLIDWCETLGHEHPQCSQFQAQALEQISQGHLARLR 900 Query: 907 AMCEQALSERTASATI 922 AMCEQALSERTASA I Sbjct: 901 AMCEQALSERTASAAI 916 >ref|YP_004350682.1| ATP-binding region, ATPase-like protein [Burkholderia gladioli BSR3] gb|AEA65170.1| ATP-binding region, ATPase-like protein [Burkholderia gladioli BSR3] Length = 908 Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust. Identities = 366/878 (41%), Positives = 499/878 (56%), Gaps = 23/878 (2%) Query: 40 IDFAQVGEAATITSALWLLHDPGAHLGVQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTL 99 ID A++ +T L LL DPG L A A P+W+P + L GY A+WL GTL Sbjct: 48 IDLARLAPQLPLTRQLALLEDPGGQLDAAAALASPNWQPATPAALTQGYSASAFWLTGTL 107 Query: 100 RNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRP 159 N+ VTRWL + RLEDV+ GD P + AG R PL R V++ Sbjct: 108 ENSGRQEVTRWLSVAVVRLEDVRYFRFAP---GD-DRPRETVLAGNREPLLSRPVKTALS 163 Query: 160 FFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGRELAIQGFLLGLSLLLAAY 219 F +TLAPGE +F LR+ S S + I+ LW P A R E + + L+G L + Y Sbjct: 164 VFPITLAPGERMRFALRIQSRSSVSIAADLWTPGAFRDTEQQGAMGEMLLVGSLLTITVY 223 Query: 220 ALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWIVHAPATLGCLATLI 279 AL G RD +L+A ++ AY AF+GYLYRY+L G W++ AP+ G + T + Sbjct: 224 ALCLGFSRRDPVFLLLAGTVLCDIAYDLAFRGYLYRYVLVDGGEWVLRAPSVAGAITTAL 283 Query: 280 YLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTALGDYRDAAPVANASAGLSYLAWLA 339 + M+ + ELER+ WK +YR +I LW A GDYR +A +A S L L W+ Sbjct: 284 FSAMAMAYAELERIPYWKWIYRALIALQCLFGLWCAFGDYRVSANLALDSIVLCNLVWIV 343 Query: 340 SMLHAWRRRLDNARMLVLSFALAWLAMSMKMLELNGVFDGDLLPDWRFAALF--QIGLLC 397 SML WRR NAR+ +L+FA+ + +++ L G+ LP+ A + + +L Sbjct: 344 SMLDGWRRGHANARLFLLAFAIDCATLFLRLAFLYGI-----LPERWGAGIAWDNLSVLL 398 Query: 398 MTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLKLEKAVAARTQELRQALQAADEANLAK 457 M + V+GRA+ L R+ ++ Q +L R REQ +LE+AV RT+ L AL AA EAN AK Sbjct: 399 MMILTVSGRALHLERQQQRAQQALLDERAREQERLERAVGERTEALHTALIAAGEANRAK 458 Query: 458 SGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGRIIMRSARHMLTMVNDLIDYARGD 517 + FL R+SHDLRTPLTSI+GFAD++QA G A G II RSA HML MVNDLID+A G Sbjct: 459 TDFLARVSHDLRTPLTSIIGFADLVQAGGREDAARGGIIRRSATHMLHMVNDLIDFAAGR 518 Query: 518 PLDTPQPTPLYLHALLQEIAQEGQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGNL 577 D P P+Y HALL ++ E Q LA + F LD+ ++PP+L LD +R+ +I+GNL Sbjct: 519 DTDALHPAPVYTHALLDALSNEAQSLAGKAGLRFVLDLRNEVPPILELDDKRIRQIVGNL 578 Query: 578 LDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGCGIAPQFQSRIFEPFERADAD 637 +DNA K+TR G + L V +++ AL I VSDTGCGIA + QSRIFEPF R DA Sbjct: 579 VDNAIKFTRAGTVTLSVDCRSEPPATAAVALMIAVSDTGCGIAAEAQSRIFEPFHRLDAA 638 Query: 638 RRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMHLQLPAERGSEQDIASHHVQEHSS 697 R PGIG+GLAIV+ WV RM G + L+S PG+GT + L +P+ E D A HH+ + + Sbjct: 639 RSLPGIGLGLAIVKHWVSRMNGMLTLDSTPGLGTTITLTIPSRIVPEADAARHHLSDTAG 698 Query: 698 TRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAPA 757 I G G ++ V ED+ EI + L D+LS+LGF V DG I + + P Sbjct: 699 VLPSIAGNGLRIWVAEDAAEIRQFLDDELSNLGFEVETMSDGAALIQRI--IGARGPRPD 756 Query: 758 LVLTDYLLPGVHGGAVLQAARRLLPEVPVLLLSATLHAC-ELELDGDLR-FDGSLLKPVN 815 LVLTD+ +P G AVL A R+ P PV++LSA A E +GD +D LLKPVN Sbjct: 757 LVLTDHTMPRAGGAAVLAAVRQHFPTAPVVVLSALPQAVEETRGNGDAAGYDACLLKPVN 816 Query: 816 FSELQEMIARLLQLPLLGSTASSASSGGSVGEVVAM--PPEALLQAALAMIADGAVSDLI 873 EL +ARLL L A +++G GE + P +L A +I GA++DL+ Sbjct: 817 LPELHNTLARLLGL------ARESTAGPPQGEEAPLVRPSMHVLAEARQLIGLGAITDLV 870 Query: 874 DWCETLGHEHPQCSQFQAQALEQISQGHLARLRAMCEQ 911 DW + L +C+ F + + G L LR + E+ Sbjct: 871 DWADGLAARDRRCATFALKVQQLARLGELGELRVLLEK 908 >ref|YP_002909869.1| ATPase-like protein [Burkholderia glumae BGR1] gb|ACR32633.1| ATP-binding region, ATPase-like protein [Burkholderia glumae BGR1] Length = 895 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 341/891 (38%), Positives = 492/891 (55%), Gaps = 16/891 (1%) Query: 21 LLLTLALGLVHAPRAGALSIDFAQVGEAATITSALWLLHDPGAHLGVQEARAQPDWRPVG 80 LL++ AL + A +ID A ++ + + L D A L W+ Sbjct: 17 LLMSFALSVFSADLRWPPAIDVASSSAQRSLANDIMLFDDRTAILTADTVLRSDGWQRAA 76 Query: 81 VSVLKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQM 140 + L G+ A W+ G L N TRW+ + RLEDV +++D D +A Sbjct: 77 MGDLSRGFTSSAIWIAGALVNEGAQATTRWISVDPVRLEDVAFYIVDQD----GNAANLR 132 Query: 141 QQAGTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEG 200 ++G P+ R + ++R F +TLAPG++ ++++RV S S + +S+ +W P + E Sbjct: 133 YRSGIGAPIADRPLDTVRTAFPITLAPGQQLRYLIRVRSRSSLTLSLYIWHPRNFQVEAR 192 Query: 201 RELAIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEA 260 R++ L G L ++ ++ V VWRDR +++ A +V+ Y AF+GYLY LL Sbjct: 193 RDITAHMLLTGAMLAMSVFSAVLAAVWRDRVFVILTATVVSEVIYELAFEGYLYALLLPQ 252 Query: 261 GSPWIVHAPATLGCLATLIYLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTALGDYR 320 G +V P+ G +A ++ + S + L+R W+ Y+ MI A + WTA GDYR Sbjct: 253 GGDLLVRLPSVAGNIAVALFSALLYSFIGLDRFCVWRWAYKIMIAAFVVASAWTAFGDYR 312 Query: 321 DAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLELNGVFDGD 380 +A VA L L W+AS+ HA+R++L NAR++ ++F +++ GV G Sbjct: 313 TSAAVAVQGTFLCNLVWIASVAHAYRKKLANARLIFIAFLPDCATFFIRI----GVLCGF 368 Query: 381 LLPDWRFAAL---FQIGLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLKLEKAVA 437 L + IG+L + S+IV R+ L + Q Q +L R Q +LE AV Sbjct: 369 LSTSYSTGTAQIWDSIGILVLLSMIVGRRSRQLLLEQRQAQRLLLAEREATQERLESAVV 428 Query: 438 ARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGRIIM 497 RT+EL+ AL+ AD A AKS FL RISHDLRTPLTSI+GFAD+IQA G A GR+I Sbjct: 429 TRTRELQSALEQADGAMRAKSNFLARISHDLRTPLTSIIGFADLIQADGREDAERGRVIR 488 Query: 498 RSARHMLTMVNDLIDYARGDPLDTPQPTPLYLHALLQEIAQEGQVLAQRQHNHFTLDISP 557 RSA HML MVNDLIDYARG DT P P+Y +ALL ++Q G LA+R N F+L++ Sbjct: 489 RSANHMLGMVNDLIDYARGREADTLSPRPVYTYALLDVVSQHGDALAKRSANEFSLNVVG 548 Query: 558 DLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGC 617 DLPP++ LD +R+H++L NLLDNAAK+T GRI L V G+ L+ +SD GC Sbjct: 549 DLPPIIELDEQRMHQVLDNLLDNAAKFTSHGRIVLTVSANRFDGARGRCNLRFSISDNGC 608 Query: 618 GIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMHLQL 677 G+A R+FEPF R +PGIG+GL+IV+LW RMG S+ +S PG+GT + ++L Sbjct: 609 GVAIADHERVFEPFVRVGEQNHRPGIGLGLSIVKLWTDRMGASLTFDSSPGIGTTIIIEL 668 Query: 678 PAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFG 737 E ++ S + E + T LIDGAG+ V++ ED+ EI LL L SLGF V + Sbjct: 669 TVNELDESEVGSLGLHESAETLPLIDGAGKLVLLAEDTAEIRELLRGDLLSLGFEVEAYD 728 Query: 738 DGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPVLLLSATLHACE 797 +G +AI L + D+ APALVLTD +P G VL AR P VPV+L+SA + Sbjct: 729 NGASAIRRL--IAEDRPAPALVLTDQFMPEASGHDVLAVARSYRPHVPVVLVSAVPFSQT 786 Query: 798 LELDGDLRFDGSLLKPVNFSELQEMIARLLQLPLLGSTASSASSGGSVGEVVAMPPEALL 857 + D FD LLKP++ ++L+ IA LL + + S V+A P LL Sbjct: 787 TQPDATEYFDAQLLKPISLADLRNTIAMLLDMQREHRPSQPVSQNPL---VLAPPSPELL 843 Query: 858 QAALAMIADGAVSDLIDWCETLGHEHPQCSQFQAQALEQISQGHLARLRAM 908 A +I GA+SDL+DW E + PQ + F A+ + +G L L+ M Sbjct: 844 DEARTLIELGAISDLLDWAEKISQIAPQHAPFAAKVSQLAKRGELRELQTM 894 >gb|EGP42966.1| ATP-binding region, ATPase-like protein [Achromobacter xylosoxidans AXX-A] Length = 894 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 329/875 (37%), Positives = 467/875 (53%), Gaps = 20/875 (2%) Query: 40 IDFAQVGEAATITSALWLLHDPGAHLGVQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTL 99 ID + V + +T L + D A + W+PV L GY A+WL + Sbjct: 33 IDLSAVSGSLPLTGELRGIEDKSASRDASQI-LDDAWQPVSAGWLNRGYSASAFWLRLEV 91 Query: 100 RNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRP 159 N++ RWL G RLEDV+ +L + PA++ G R PL R V + Sbjct: 92 SNSSGSTQERWLSFGVPRLEDVRFYLFPPGQ----ATPAKVLLQGNREPLAGREVLASVS 147 Query: 160 FFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGRELAIQGFLLGLSLLLAAY 219 + L PGE ++RV S S I++ L PAA + R + L+G ++ Y Sbjct: 148 VAPLRLEPGEHMTVLVRVQSRSAINMEPTLRTPAAFVSQTQRNTMLVALLVGALAMVGIY 207 Query: 220 ALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWIVHAPATLGCLATLI 279 A + G+V RD +L++A + Y +FQG LYRY+L G + AP+ L LA + Sbjct: 208 AGLLGVVQRDPVFLLLSAAVFIEILYSLSFQGLLYRYVLTGGGDMALRAPSVLATLAASL 267 Query: 280 YLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTALGDYRDAAPVANASAGLSYLAWLA 339 + M+ +L R+ W+ +Y +I A A T+W ALGDYR+AA L L WL Sbjct: 268 FAFMAMLFADLHRVRLWRGVYLSLIAAGVAGTVWAALGDYREAAQALIGLIFLWALVWLV 327 Query: 340 SMLHAWRRRLDNARMLVLSFALAWLAMSMKMLELNGVFDGDLLPDWRFAALFQIGLLC-- 397 SM WRR NAR+ +LSFA+ + +++ ++G+ G W LL Sbjct: 328 SMADGWRRGHANARIFLLSFAVYCACLFLRVAYIHGMLPGR----WEGGPEVAWDLLSVS 383 Query: 398 -MTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLKLEKAVAARTQELRQALQAADEANLA 456 M +V++ GR+ ++ Q + R RE +L++AV RTQ L+ AL ADEA Sbjct: 384 LMLAVLLYGRSRQHRQERLAAQRELAQAREREHQRLDQAVTERTQALQAALILADEAGRV 443 Query: 457 KSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGRIIMRSARHMLTMVNDLIDYARG 516 + FL RISHDLRTPLTSI+GFAD+IQA G A G +I RSA HML MVNDLIDYA G Sbjct: 444 RQDFLARISHDLRTPLTSIIGFADLIQAGGRDDAPRGAVIRRSADHMLGMVNDLIDYAAG 503 Query: 517 DPLDTPQPTPLYLHALLQEIAQEGQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGN 576 + P Y+HALL +A+E +A RQ N F L ++ LP VL +D +R+ ++L N Sbjct: 504 AGGQALRLAPEYVHALLDTVAKESAPIAARQDNRFELRVADALPAVLEMDGKRVRQVLSN 563 Query: 577 LLDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGCGIAPQFQSRIFEPFERADA 636 L+DNAAK+TR G + L + A A G L + V DTGCGIAPQ + IFEPF+R + Sbjct: 564 LIDNAAKFTRGGVLTLTADYAAPGAGEPCGWLTLSVGDTGCGIAPQDRQHIFEPFQRLSS 623 Query: 637 DRRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMHLQLPAERGSEQDIASHHVQEHS 696 QPG+G+GLAIV+ WVQRM G I +ES+ G GT + + LP + E ++ H++ + Sbjct: 624 AENQPGVGLGLAIVQQWVQRMHGRIQVESELGQGTTIRVVLPVRQVDESRVSHHYIAAAA 683 Query: 697 STRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAP 756 L+DG GR++ + ED+PEI L ++L+SLGF V DG +A + A D + P Sbjct: 684 HVLPLLDGTGRRIWLAEDTPEIREFLVEELASLGFQVESEADGLRMVARIQA--DDAQRP 741 Query: 757 ALVLTDYLLPGVHGGAVLQAARRLLPEVPVLLLSATLHACELELDGDLRFDGSLLKPVNF 816 L+LTD+ + G G AVL AAR P++PV+ +SAT E +D SLLKP+N Sbjct: 742 DLILTDHRMEGADGSAVLAAARARWPDLPVVAVSATPQ--EAPTPDGAGYDASLLKPINL 799 Query: 817 SELQEMIARLLQLPLLGSTASSASSGGSVGEVVAMPPEALLQAALAMIADGAVSDLIDWC 876 EL+ ++ RLLQLP T A V + A L+ ++ G +SDL+DW Sbjct: 800 VELRHVLGRLLQLP----TQQIAREASLVSAPMPCLSRAELEQVQRLLDIGGISDLMDWA 855 Query: 877 ETLGHEHPQCSQFQAQALEQISQGHLARLRAMCEQ 911 + P + F Q G LA + +CE+ Sbjct: 856 RAIQARDPAFTDFSQQVQRLARLGDLAAIGKLCER 890 >gb|EFV85400.1| hypothetical protein HMPREF0005_04492 [Achromobacter xylosoxidans C54] Length = 894 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 328/873 (37%), Positives = 469/873 (53%), Gaps = 20/873 (2%) Query: 40 IDFAQVGEAATITSALWLLHDPGAHLGVQEARAQPD--WRPVGVSVLKLGYDEGAYWLYG 97 ID + VG + L + D H G Q+A D W+PV L GY A+WL Sbjct: 33 IDLSTVGGTLPLVGELRGIED---HAGDQDASQVLDGAWQPVTARWLNRGYSASAFWLRL 89 Query: 98 TLRNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGTRFPLGQRSVRSL 157 + N + RWL G RLEDV+ +L P+ + AG R PL +R + + Sbjct: 90 EVSNTSGSAQERWLSFGVPRLEDVRFYLFTPGQ----RQPSGILLAGNREPLARREIPAT 145 Query: 158 RPFFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGRELAIQGFLLGLSLLLA 217 + L PG+ ++RV S S I + L PAA R + L+G +++ Sbjct: 146 VSVVPLRLEPGQRMTVLVRVQSRSAISMEPTLRTPAAFVGVTQRNTMVAALLIGALMMVG 205 Query: 218 AYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWIVHAPATLGCLAT 277 YA V G RD +L++A + Y +FQG LYRY+L G ++ AP+ L LA Sbjct: 206 LYAAVLGAAQRDPVYLLLSAAIFIEILYSLSFQGLLYRYVLTGGGEMVLRAPSVLATLAA 265 Query: 278 LIYLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTALGDYRDAAPVANASAGLSYLAW 337 ++ M+ +L R+ W+ +YR +I A A +W ALGDYR+AA L L W Sbjct: 266 SLFGFMAMLFADLHRVRIWRGVYRGLIAAGVAGAVWAALGDYREAAQALIGLIFLWALVW 325 Query: 338 LASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLELNGVFDGDLLPDWRFA-ALFQIGLL 396 L SM WRR NAR+ +LSFA+ + +++ + G+ G A L + L Sbjct: 326 LVSMADGWRRGHANARIFLLSFAIYCSCLFLRVAYIQGLLPGRWAGGPEVAWDLLSVSL- 384 Query: 397 CMTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLKLEKAVAARTQELRQALQAADEANLA 456 M +V++ GR+ ++ Q + R RE +L++AV RTQ L+ AL ADEA Sbjct: 385 -MLAVLLHGRSRQHRQERLAAQRELAQAREREHQRLDQAVTERTQALQAALILADEAGRV 443 Query: 457 KSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGRIIMRSARHMLTMVNDLIDYARG 516 + FL RISHDLRTPLTSI+GFAD+IQA G A G +I RSA HML MVNDLIDYA G Sbjct: 444 RQDFLARISHDLRTPLTSIIGFADLIQAGGRDDAPRGAVIRRSADHMLGMVNDLIDYAAG 503 Query: 517 DPLDTPQPTPLYLHALLQEIAQEGQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGN 576 + P Y HALL +A+E +A RQ N F L +S +P VL +D +R+ ++L N Sbjct: 504 AGGQALRLAPEYAHALLDAVAKEAAPIAARQDNRFELRVSDSVPAVLEMDGKRVRQVLSN 563 Query: 577 LLDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGCGIAPQFQSRIFEPFERADA 636 L+DNAAK+TR G + L + A A G L + V DTGCGIAP+ + IFEPF+R + Sbjct: 564 LVDNAAKFTRGGVLTLTADYAAPAAGEAAGWLTLAVRDTGCGIAPEDRQHIFEPFQRLTS 623 Query: 637 DRRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMHLQLPAERGSEQDIASHHVQEHS 696 QPG+G+GLAIV+ WVQRM G I ++S+ G GT + + LP + E ++ H++ + Sbjct: 624 ADSQPGVGLGLAIVQQWVQRMNGRIHVDSEVGQGTTISVALPVRQVDESRVSHHYIAAAA 683 Query: 697 STRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAP 756 L+DGAG+++ + ED+PEI L ++L+SLGF V DG +A + A D P Sbjct: 684 HVLPLLDGAGKRIWLAEDTPEIREFLVEELASLGFLVESEADGRGMVARIQA--DDARRP 741 Query: 757 ALVLTDYLLPGVHGGAVLQAARRLLPEVPVLLLSATLHACELELDGDLRFDGSLLKPVNF 816 L+LTD+ + G G AVL+AAR P++PV+ +SAT + LDG +D SLLKP+N Sbjct: 742 DLILTDHRMEGADGSAVLRAARARWPDLPVVAVSATPQE-KPPLDG-AGYDASLLKPINL 799 Query: 817 SELQEMIARLLQLPLLGSTASSASSGGSVGEVVAMPPEALLQAALAMIADGAVSDLIDWC 876 EL+ ++ RLL L +T +A+ + A L+ ++ G +SDL+DW Sbjct: 800 VELRHLLGRLLHL----ATNPAANEPAPAASPLPRLSRAELEQVQRLLDIGGISDLMDWA 855 Query: 877 ETLGHEHPQCSQFQAQALEQISQGHLARLRAMC 909 + P + F Q QG LA + +C Sbjct: 856 RAVQARDPAFTDFSQQVQRLARQGDLAAIGELC 888 >ref|YP_569644.1| ATPase-like ATP-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE39743.1| Hpt sensor hybrid histidine kinase [Rhodopseudomonas palustris BisB5] Length = 945 Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 254/805 (31%), Positives = 407/805 (50%), Gaps = 52/805 (6%) Query: 40 IDFAQVGEAATITSALWLLHDPGAHLGVQEARAQPDWRPVGVSVLKLGYDEGAYWLYGTL 99 +D A+V + + +L +L D +L EA W + L G+ A+WL G Sbjct: 42 VDLARVTDHLALEQSLSILEDRDGYLSAGEALRHSGWVAASLRTLTQGFTSSAFWLRGAF 101 Query: 100 RNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGTRFPLGQRSVRSLRP 159 N ++ VTRWL +G RLEDV+ G D P++ AG R PL R V++ R Sbjct: 102 YNGSDQSVTRWLSVGVVRLEDVRYFRFAP--GEDK--PSETLLAGNRTPLDSRPVKAARS 157 Query: 160 FFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGRELAIQGFLLGLSLLLAAY 219 F +TLAPGE LRV S S + I +LW PA+ ++ + +L I+ L+G +A + Sbjct: 158 VFPITLAPGERTIVALRVQSRSSVSIEASLWSPASFQEADAPDLLIEMLLVGSMGTMALF 217 Query: 220 ALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWIVHAPATLGCLATLI 279 +LV GL RDR + +AA + Y AFQG+LYR++L G ++ AP LG +A ++ Sbjct: 218 SLVLGLARRDRVFLALAAGAIAEVIYDLAFQGFLYRFILTGGGDVVLRAPGVLGLIAHVL 277 Query: 280 YLRMSQSLVELER--LWRWKTLYRCMILA-LGAVTLWTALGDYRDAAPVANASAGLSYLA 336 M+ + ++R +W W+TL C A L A +L+ A GDYR + + Sbjct: 278 LCTMAAMFIGIDRIAIW-WRTL--CTFSAILLAGSLFAAFGDYRTTVSITTVLQVVYEAL 334 Query: 337 WLASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLELNGVFDGDLLPDWRFAALF---QI 393 W+ ++L +WRR N+R+++L+ A + + + + G++ W + + Sbjct: 335 WIIAVLDSWRRGFGNSRLVLLASGPAVVRFFLYLGHILGIWPA----SWSVGSEITWNNL 390 Query: 394 GLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLKLEKAVAARTQELRQALQAADEA 453 ++ + I GR ++ ++ Q ++ + E+ +L++AV RT+EL+ AL AA EA Sbjct: 391 SIMLLLLFIAIGRLREIESARDKAQQDLVAFQEHERERLQRAVDERTRELQTALVAAGEA 450 Query: 454 NLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPHAGHGR----IIMRSARHMLTMVND 509 N AKS FL +SH++RTP+ +LG ++++ P G R + R+ ML + Sbjct: 451 NRAKSDFLAVMSHEIRTPMNGMLGAIHLLKSM--PLQGKVRTAVNVAERTGAAMLATIGG 508 Query: 510 LIDYARGDPLDTPQPTPLY----LHALLQEIAQEGQVLAQRQHNHFTLDISPDLPPVLAL 565 ++D+A+ + +P P Y L ALL ++ + A+++ L + LP + Sbjct: 509 ILDFAK---ISDSKPEPSYAAFDLRALLADVVAIMSLRAEQKSVSLKLVVDQVLPATVMG 565 Query: 566 DARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGALQIEVSDTGCGIAPQFQS 625 DA L +IL NL+ NA K+T G + + A H D +++EV+DTG GI Sbjct: 566 DADLLRQILLNLVGNALKFTETGEVCVSAAPDAIHVD----WIRLEVADTGIGIPRDRLD 621 Query: 626 RIFEPFERADAD--RRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMGTRMH--LQLPAER 681 R+FEPF +AD+ RR G G+GLAI R + MGG I +SQPG G+R L LP Sbjct: 622 RLFEPFVQADSSIARRFGGTGLGLAICRRLTEAMGGCITADSQPGQGSRFQVRLPLPPTD 681 Query: 682 GSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLGFAVSVFGDGET 741 +E +I + Q ++ + L V+VV+D +LS L G V DG Sbjct: 682 AAEIEIQAPAQQGNAIRKTL------SVLVVDDDENNRFVLSGLLDVKGHRVREAADGVQ 735 Query: 742 AIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPE---VPVLLLSATLHACEL 798 A+A LS +D +VL D +PG+ G +++ R L + VP++ ++A + A + Sbjct: 736 ALALLSENPVD-----VVLVDLEMPGLSGMELVRYIRALGGKGATVPIVAITANVTAGVV 790 Query: 799 ELDGDLRFDGSLLKPVNFSELQEMI 823 E DG L KP+ +LQ I Sbjct: 791 ERCVQAGMDGYLSKPIMPEDLQRTI 815 >ref|YP_004380953.1| integral membrane sensor hybrid histidine protein kinase [Pseudomonas mendocina NK-01] gb|AEB59201.1| integral membrane sensor hybrid histidine protein kinase [Pseudomonas mendocina NK-01] Length = 813 Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 243/758 (32%), Positives = 379/758 (50%), Gaps = 56/758 (7%) Query: 84 LKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQA 143 L+ Y AYWL L N RWL +G RL D+Q+H L D Q A Sbjct: 86 LRQEYSHSAYWLRFELHNGHAEACRRWLTVGEPRLHDIQVHTLRGDTWSR-------QIA 138 Query: 144 GTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGREL 203 G +PL Q V +P F + L PGE+ Q ++RV++ +++ + LW A+ Q+ R Sbjct: 139 GAAYPLQQWPVIERQPVFELLLEPGEQVQVLVRVSTPTLLLLQPVLWSETALLQDRQRVS 198 Query: 204 AIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSP 263 G LG+ LL+ ++LV G + R R L + AA + GYL L + Sbjct: 199 LGDGITLGIVLLIVPFSLVVGWIVRSRLLAVHAATVFAYVLVTIVASGYLI--FLPSLMG 256 Query: 264 WIVHAPATLGCLATLIYLRMSQSLVE---LERLWRWKTLYRCMILALGAVTLWTALGDYR 320 W + + L L+ L +L ++ L++ L RLW W LY ++LA A LW L D Sbjct: 257 WSLPIWSALSILSYLCFLAYARELLQVRQLPRLWGW--LYNLVLLAFIAACLWGLLVDSV 314 Query: 321 DAAPVANASAGL-SYLAWLASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLEL-----N 374 P+A + +Y+ A+++ AWRR L+ L+W+A ++ + L Sbjct: 315 QGRPLAELCTRVGAYVLLPATLIAAWRRGLE----------LSWMAWAVPLFMLVQFLVR 364 Query: 375 GVFDGDLLPDWRFAALFQI-----GLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQ 429 V D LP A++ + G+ + ++T R+ + + + + EQ Sbjct: 365 YVLQLDTLPWQARASMLSLSSTLPGVAILVCTLITEVVRSRRRERHALT-ALEHQQKAEQ 423 Query: 430 LKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPH 489 +LE VA RT +LR++LQA +S + RISHDLR+PL SI+ A + QA G Sbjct: 424 ERLESTVAIRTGQLRESLQA-------RSSLMARISHDLRSPLVSIIDHARLAQA--GAA 474 Query: 490 AGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQP-TPLYLHALLQEIAQEGQVLAQRQH 548 R + R+AR L ++++L++++R + P YL+ L+E+ +E LA RQ+ Sbjct: 475 EDFPRKVERNARQQLELIDELLEFSRSELQQLELILAPGYLYGFLRELEEEAGFLASRQN 534 Query: 549 NHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGAL 608 N F + DLPP++ D RRL ++L NLL NAAK+T +G I V A+ G+ L Sbjct: 535 NRFECRFADDLPPLVRADLRRLRQVLLNLLGNAAKFTHDGVIVFEV--SGRPAEDGQVLL 592 Query: 609 QIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQPG 668 +SD+G GI Q + R+ +PF+R G G+GL+IV +Q MG + L+ Sbjct: 593 NFSISDSGIGIDTQARDRLLKPFQRGQGVEGYDGSGLGLSIVTQLLQIMGSELQLQRLEP 652 Query: 669 MGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSS 728 G+R QL SE ++ S V+ H V ++GAGR++++V+D P+ LSD L+ Sbjct: 653 TGSRFSFQLTLACASEDELDSSFVENHG---VQVEGAGRRILIVDDLPQNRDWLSDLLAG 709 Query: 729 LGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPVLL 788 F V G+ + +L A D L+++D +PG+ G +L A R PE+PVLL Sbjct: 710 YDFEVQTASSGQQVLEYLQAEPYD-----LLISDMRMPGMDGWELLAALRPRWPELPVLL 764 Query: 789 LSATLHACELELDGDLRFDGSLLKPVNFSELQEMIARL 826 SA ++ LRFD +LLKP + ++L + RL Sbjct: 765 YSAVPALRPAQMPPHLRFDATLLKPASSNDLLACVDRL 802 >ref|ZP_08404277.1| integral membrane sensor hybrid histidine protein kinase [Hylemonella gracilis ATCC 19624] gb|EGI78613.1| integral membrane sensor hybrid histidine protein kinase [Hylemonella gracilis ATCC 19624] Length = 812 Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 250/774 (32%), Positives = 381/774 (49%), Gaps = 84/774 (10%) Query: 88 YDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGTRF 147 Y + A WL +LRN+ P RWL L +ED Q+H+L D + Q+AG + Sbjct: 79 YTQSAVWLTLSLRNSQTQPCRRWLNLAKPNVEDQQVHMLRADGQWHS------QRAGRAY 132 Query: 148 PLGQRSVRSLRPFFTVTLAPGEERQFMLRVAS-DSIIDISVALWEPAAMRQEEGRELAIQ 206 PL SV +P F + L GE + + R +S S++ ++ L+ AA Q + I Sbjct: 133 PLRTWSVAQRQPVFLLDLKAGETVRVLARASSTSSLLLMNPQLFSDAAWLQTQQSTHIID 192 Query: 207 GFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWIV 266 G G+ LL+ A L G + R L+ ++ ++ ++C GYL + L P+ Sbjct: 193 GLSQGIVLLVVAVGLTVGWILRSGMLLALSFGALSNALFVCVVNGYL--FYLPTLLPYTE 250 Query: 267 HAPATLGCLAT---LIYLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTAL-GDYRDA 322 G A +IY+R L L LW + MI+ L + T L G Y A Sbjct: 251 AFAVVTGTFAISGFMIYVRQLYGLSRLPPLWTY------MIVGLVGFYIATRLIGWY--A 302 Query: 323 APVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLEL--NGVFDGD 380 AP ++ +A++A ++H R + +AWL M + ++L VFD D Sbjct: 303 APALSSMGLWVMVAFVAVLVHGHRHQF-----------MAWLGMHLMAVQLLSQYVFDFD 351 Query: 381 LLPDWRFAALFQIGLLCMTSVI--------VTG--------------RAVDLHRKHEQMQ 418 W A F L ++S++ ++G + R+ ++ Q Sbjct: 352 KSVPW--APHFPPALEFLSSLVWQSAYTQNLSGTLNGAIWLAATMVLEVLGSRRREQRAQ 409 Query: 419 WTMLYLRVREQLKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGF 478 + R E +LE AVA RT +LR+AL A+ L RISHDLR+PL I+ Sbjct: 410 AALESQRRSELDRLESAVAERTGQLREALD-------ARRNLLARISHDLRSPLAGII-- 460 Query: 479 ADMIQASGGPHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQ--PTPLYLHALLQEI 536 +M Q++ A R I RSAR + ++++L+++AR D L P+ P YL+ALL E+ Sbjct: 461 -NMTQSAAALEAETTRHIERSARRQMELIDELLEFARQD-LKGPEIHAQPGYLYALLNEM 518 Query: 537 AQEGQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQW 596 QEG++LAQRQHN F +I+ DLP + D R L ++L NL+ NAAK+T +G I L V+ Sbjct: 519 EQEGRLLAQRQHNRFEAEIAADLPLAVRADFRHLRQVLLNLMGNAAKFTTQGSIRLQVEC 578 Query: 597 QADHADAGKGA----LQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRL 652 D + +G+ L+ VSDTG GI+ +S++ +PF R + G+G+GLAIVR Sbjct: 579 -LDKIEQTQGSGHTRLRFSVSDTGPGISESERSKVMQPFGRGANAQGVDGVGLGLAIVRQ 637 Query: 653 WVQRMGGSIVLESQPGMGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVV 712 + M + LES PG G+R L E E ++ V+ H++ ++G GR+++V Sbjct: 638 LLNGMDAELALESVPGEGSRFSFVLDLELADESEVRDIFVESHAAE---VEGRGRRILVA 694 Query: 713 EDSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGA 772 +D L+D L GF V DG+ A A + E L+LTD ++P + G Sbjct: 695 DDLSANRDQLTDLLGGYGFEVDTAADGQEA-----AQMLRDERYDLLLTDQMMPRMDGWE 749 Query: 773 VLQAARRLLPEVPVLLLSATLHACELELDGDLRFDGSLLKPVNFSELQEMIARL 826 +L AR L P++PV+L SA ++ D RFD +LLKP EL I RL Sbjct: 750 LLTQARALRPDMPVVLYSAAPPMPPMDWPADRRFDATLLKPATSGELLRQIDRL 803 >ref|YP_004352071.1| histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA67067.1| putative Histidine kinase, Hybrid [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 795 Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 254/826 (30%), Positives = 402/826 (48%), Gaps = 73/826 (8%) Query: 15 LRMMRALLLTLALGLVHAPRAGALSIDFAQVGEAATITSALWLLHDPGAHLGVQEARAQP 74 +R+++ LLLT+AL RA + I A + + A+ + D A L ++E P Sbjct: 1 MRLLQVLLLTIALLSTGLLRAAPVDICRA---DHLDLMPAMQIFEDTQASLSLEEVTQLP 57 Query: 75 D--WRPVGVSVLKLGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLLDTD-HG 131 + ++ GY A+WL L N++ +R L +G+ RLED++++ D H Sbjct: 58 NTYFKHATPGWPTQGYSRSAFWLKVQLSNSSTAACSRLLVVGAPRLEDIRVYQPGQDAHA 117 Query: 132 GDASAPAQMQQAGTRFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDISVALW- 190 G A A+ Q TR +P F V+LA GE +RVAS+ + + LW Sbjct: 118 GGAYPLAEWPQPATR-----------QPAFPVSLAAGESATLFIRVASNFQMLLEPELWS 166 Query: 191 EPAAMRQEEGRELAIQGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQ 250 EPA +R ++ L+ G LG+ LL+ + + G + R + L + A + + C Sbjct: 167 EPALLRSQQQTYLS-DGLTLGIVLLVVPFGFIVGWILRSQLLTVNAGAIFSYILLTCILN 225 Query: 251 GYLYRYLLEAGSPWIVHAPATLGCLATLIYLRMSQSLVELERL-----WR-WKTLYRCMI 304 GYL + G W + +++L + L+++ RL W W L C+ Sbjct: 226 GYLIYWPTALG--WTRELLTCASAFSFVLFLAYIRVLLQVARLPGIIGWSYWVPLLGCI- 282 Query: 305 LALGAVTLWTALGDYRDAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWL 364 LG LW D A + S Y LA++ AWR RL+ M L AL Sbjct: 283 --LG--RLWWLKIDPVQGAQIVQISLMSFYGVLLATLFMAWRARLNYNWMARLVPALLLG 338 Query: 365 AMSMKMLELNGVFDGDLLPDWRF--------AALFQIGLLCMTSVIVTGRAVDLHRKHEQ 416 + M++ F + LP W+ + L + LL T ++ R+ + + Sbjct: 339 QLLMRLF-----FPQEQLP-WQSPQSKYSLSSTLAGVALLVCTLIMEVARS---RNREKN 389 Query: 417 MQWTMLYLRVREQLKLEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSIL 476 T+ R EQ +LE VA RT +LR++L A +S + RISHDLR+PL I+ Sbjct: 390 ALSTLDQQRQAEQERLESTVALRTSQLRESLAA-------RSALMARISHDLRSPLVRII 442 Query: 477 GFADMIQASGGPHAGHGRIIMRSARHMLTMVNDLIDYARGDPLDTPQPT--PLYLHALLQ 534 +A ++ A GP+ + I R+AR L +++++++++ G+ L+ Q T P YL+ L Sbjct: 443 DYARLLHA--GPNRDYQATIERNARQQLELIDEMLEFSHGE-LEQMQLTLAPGYLYGFLN 499 Query: 535 EIAQEGQVLAQRQHNHFTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHV 594 EIA E LA RQ N F ++ DLPP++ D +RL +IL NLL NAAK+TR G+I V Sbjct: 500 EIADEAGFLAARQGNTFEAVLADDLPPLVEADFKRLRQILMNLLANAAKFTRNGQIRFEV 559 Query: 595 QWQADHADAGKGALQIEVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWV 654 + A L+ V DTG GI PQ ++ +PF R +R G G+GL+IV + Sbjct: 560 S-ASSGASTNTVELRFSVIDTGIGIDPQEFEQLLQPFRRGRNAQRFEGSGLGLSIVTQLL 618 Query: 655 QRMGGSIVLESQ-PGMGTRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVE 713 +RM LE Q G G+ +L E D+ + V +++ DG G+ V++V+ Sbjct: 619 ERMDSR--LEPQTTGQGSHFSFRLQLNCVQEHDLENGIVDNNATP---FDGQGKHVLLVD 673 Query: 714 DSPEIARLLSDQLSSLGFAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAV 773 D + + L D L+ GF VS+ +GE A+A L+ ++D L+++D ++PG+ G + Sbjct: 674 DIEQNSEWLYDLLAGYGFDVSMAANGEDALACLAEQSVD-----LLISDQMMPGMDGWEL 728 Query: 774 LQAARRLLPEVPVLLLSATLHACELELDGDLRFDGSLLKPVNFSEL 819 L+ R ++PV+L SA DL FD LLKP + EL Sbjct: 729 LRQVRDGPRDLPVMLYSAVPPRRPENYPQDLAFDAVLLKPADSREL 774 >ref|YP_002801227.1| integral membrane sensor hybrid histidine protein kinase [Azotobacter vinelandii DJ] gb|ACO80252.1| integral membrane sensor hybrid histidine protein kinase [Azotobacter vinelandii DJ] Length = 796 Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 238/805 (29%), Positives = 374/805 (46%), Gaps = 51/805 (6%) Query: 29 LVHAPRAGALSIDFAQVG-EAATITSALWLLHDPGAHLGVQEARAQPDWRPVGVS--VLK 85 L++ P A + S+ A E + L + D A + +++ A P+ R + +L Sbjct: 2 LLYLPMAWSGSLSLASCDLERLVLQPWLRVFEDARADMSLEQILALPEERLSAATAHLLA 61 Query: 86 LGYDEGAYWLYGTLRNAAEVPVTRWLGLGSARLEDVQLHLLDTDHGGDASAPAQMQQAGT 145 GY A+WL L N WL GSAR D+ LH + GG + Q AG Sbjct: 62 PGYSRSAFWLRLELENRTGQACQWWLFPGSARARDMILH--QQEAGGWSR-----QVAGA 114 Query: 146 RFPLGQRSVRSLRPFFTVTLAPGEERQFMLRVASDSIIDISVALWEPAAMRQEEGRELAI 205 PL + ++ + P F V L G + LR+ASD + L + +E E Sbjct: 115 WHPLAEWTMPTRLPAFEVGLPAGTSKVLWLRLASDYAFVMQPMLLSHTGLLKERMAESLA 174 Query: 206 QGFLLGLSLLLAAYALVQGLVWRDRSLMLMAAWLVTAQAYICAFQGYLYRYLLEAGSPWI 265 G + G+ LLL ++L G ++R L+ A ++ + GY + YL W Sbjct: 175 DGLVFGIVLLLVIFSLALGRIFRLPLLVAHAMSMLAYCLNVALATGYGFVYLWPTAMEWD 234 Query: 266 VHA---PATLGCLATLIYLRMSQSLVELERLWRWKTLYRCMILALGAVTLWTAL------ 316 A + L + + YLR+ L+ ++ C LA+G + + AL Sbjct: 235 GRAILLSSALTRILVIAYLRIL--LLVRQQPPFCGYFLTCCQLAIGGLAVGHALWPEVEL 292 Query: 317 ---GDYRDAAPVANASAGLSYLAWLASMLHAWRRRLDNARMLVLSFALAWLAMSMKMLEL 373 G + V A G++ + L R++L L L L + L Sbjct: 293 LAPGAWPGMLAVVAALLGIA-----GATLVGHRQKLPYDWFCYLVPGLILLQALLIYAFL 347 Query: 374 NGVFDGDLLP-DW-RFAALFQIGLLCMTSVIVTGRAVDLHRKHEQMQWTMLYLRVREQLK 431 G+ W + L+ LLC T V T R+ + +++ + L+ EQ + Sbjct: 348 FGLASRPPAEYSWLSLSTLYGGALLCYTLVSQTARS---RGREQRVLDDIEQLKRAEQER 404 Query: 432 LEKAVAARTQELRQALQAADEANLAKSGFLTRISHDLRTPLTSILGFADMIQASGGPHAG 491 LE AV RT +LR +L+ ++ L RISHDLR+PL +L A +QA A Sbjct: 405 LEHAVEVRTAQLRDSLRG-------QNLLLARISHDLRSPLQGMLEHARRLQARPAGLAD 457 Query: 492 HGRIIMRSARHMLTMVNDLIDYARGDPLDTPQ-PTPLYLHALLQEIAQEGQVLAQRQHNH 550 + R I S RH L ++++L++Y+RG+ P YL L+EI ++G+ LA+R HN Sbjct: 458 YSRRIEHSVRHQLELIDELLEYSRGELKQLELLVAPGYLFGFLREIEEQGRFLAERNHNR 517 Query: 551 FTLDISPDLPPVLALDARRLHRILGNLLDNAAKYTREGRIGLHVQWQADHADAGKGALQI 610 + DLPP++ D RRL +IL NLL NA K+T +G I L+V AG+ L Sbjct: 518 LECHFANDLPPLVNADFRRLRQILVNLLANAGKFTCDGCIVLYVA-SLMSVTAGRVKLYF 576 Query: 611 EVSDTGCGIAPQFQSRIFEPFERADADRRQPGIGMGLAIVRLWVQRMGGSIVLESQPGMG 670 V+D+G GIA + R+ EPF R + G G+GL IVR + MG ++++ G Sbjct: 577 SVADSGIGIAAAERERLLEPFSRGSNAGDREGCGLGLYIVRQLLGSMGSRLLIDESDLGG 636 Query: 671 TRMHLQLPAERGSEQDIASHHVQEHSSTRVLIDGAGRQVVVVEDSPEIARLLSDQLSSLG 730 ++ L + +EQ + +++ H +T +G R++++V+D +L + L+ G Sbjct: 637 SQFSFVLELDLAAEQQLEQVYIESHVATG---EGYDRRILIVDDVLVSREMLRELLAGYG 693 Query: 731 FAVSVFGDGETAIAHLSALTMDQEAPALVLTDYLLPGVHGGAVLQAARRLLPEVPVLLLS 790 + G GE A+A L+A +D L++ D L+PG++G VL RR P++PVLL S Sbjct: 694 YDPLACGSGEEALALLAAEPVD-----LLILDQLMPGMNGWMVLAEVRRCWPDLPVLLYS 748 Query: 791 ATLHACELELDGDLRFDGSLLKPVN 815 A+ L G L FD LLKP N Sbjct: 749 ASPPLRPSSLPGHLEFDACLLKPAN 773