BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0059.p (337 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_747708.1| phage integrase family protein [Nitrosomonas eu... 342 4e-92 ref|YP_002910259.1| phage-related integrase [Burkholderia glumae... 334 1e-89 ref|ZP_00650976.1| Phage integrase:Phage integrase, N-terminal S... 333 2e-89 ref|YP_001775901.1| phage-related integrase [Xylella fastidiosa ... 333 2e-89 ref|NP_298931.1| phage-related integrase [Xylella fastidiosa 9a5... 332 4e-89 ref|ZP_00652349.1| Phage integrase:Phage integrase, N-terminal S... 332 4e-89 emb|CCD30102.1| Phage integrase family protein [Candidatus Glome... 331 8e-89 ref|YP_001775073.1| phage-related integrase [Xylella fastidiosa ... 331 8e-89 ref|ZP_07265399.1| Phage integrase:Phage integrase, N-terminal S... 330 3e-88 ref|NP_779231.1| phage-related integrase [Xylella fastidiosa Tem... 330 3e-88 >ref|YP_747708.1| phage integrase family protein [Nitrosomonas eutropha C91] gb|ABI59743.1| phage integrase family protein [Nitrosomonas eutropha C91] Length = 341 Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 172/338 (50%), Positives = 230/338 (68%), Gaps = 22/338 (6%) Query: 2 IYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLDN 61 IYYYYD GG PR+EI LG++Y AV+KWAELE ++++TFRY E Y ++ M Sbjct: 24 IYYYYDTGGKPRKEISLGTDYAIAVKKWAELEIDAKPKHNQIITFRYVAERYMREIMATK 83 Query: 62 SPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGDE 121 +P+T+++ L + +L+ FFD+PPAPLEEI+PIH+RQY+ R + Sbjct: 84 APRTQKDNLSEIEWLYRFFDDPPAPLEEIEPIHIRQYLDQR------------------Q 125 Query: 122 GRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGR-DVYVYDDIYSQVWEKSG 180 + ANR+KAL SH+WN AR G T LPNPCAGIK RE+GR DVY+ D+IY V++ + Sbjct: 126 AKTRANREKALFSHIWNKAREWGYTSLPNPCAGIKGNREKGRKDVYIEDEIYMAVYKVAS 185 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 LR+AMD+AYL G R AD+L + E + +G I V Q KT K+RI++ GEL L+D+I Sbjct: 186 HPLRDAMDMAYLTGQRPADILALRESDLTDGRINVKQQKTGKKLRIKLEGELAALIDRIK 245 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 +RK + + + L+V+E GQ L+Y TLRS FDKARE AGI EFQFRDLRAKAGTDK Sbjct: 246 SRK--VKHTIRSLYLIVDETGQKLSYTTLRSHFDKARELAGIKKEEFQFRDLRAKAGTDK 303 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 +S G +R AQ QLGH ++T TE Y+R R+G ++TPTK Sbjct: 304 AESSGDIRQAQKQLGHANITMTETYIRDRKGDEITPTK 341 >ref|YP_002910259.1| phage-related integrase [Burkholderia glumae BGR1] gb|ACR27555.1| Phage-related integrase [Burkholderia glumae BGR1] Length = 339 Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 179/335 (53%), Positives = 222/335 (66%), Gaps = 21/335 (6%) Query: 3 YYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLDNS 62 YYYYD GG PRR LG ++VEA+R +A+LE T S +VTFR+ E Y + + Sbjct: 26 YYYYDIGGKPRRWKALGGDFVEALRLYADLE-QGDRTASTLVTFRHVAERYLVDVLPSKA 84 Query: 63 PKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGDEG 122 +TRR L Q L+ FFD+PPAPL+EIKPIH+R+Y+ WR Sbjct: 85 VETRRTNLLQLEKLYSFFDSPPAPLDEIKPIHIRKYLDWRK-----------------AS 127 Query: 123 RVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSGQV 182 V+ANR+ AL SH++N AR G TD PNPCAG++ RE GRDVYV D +Y +VWEK+ Sbjct: 128 PVSANREIALFSHIFNKAREWGATDRPNPCAGVRKHREAGRDVYVGDQLYRRVWEKADIP 187 Query: 183 LREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKILAR 242 LREAMDLAYL G R ADVLK+DE+ IR+G + V QNKT +++RIEI GEL L+D+I AR Sbjct: 188 LREAMDLAYLTGQRPADVLKMDERDIRDGVVTVRQNKTGARLRIEIVGELATLLDRIAAR 247 Query: 243 KRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDKTD 302 K I +TRL+V+E+G+PL LR RFD+ RE AGI AEFQFRDLRAKAGTDK Sbjct: 248 K--IDHNPRSTRLIVDEQGRPLGQSALRFRFDRTREAAGIAKAEFQFRDLRAKAGTDKES 305 Query: 303 SEGVRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 + +R AQ LGH SV TE YVRK RG TPT+ Sbjct: 306 ASDLRGAQSLLGHGSVAMTEHYVRK-RGTTTTPTR 339 >ref|ZP_00650976.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] ref|ZP_00652549.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] ref|ZP_00683076.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] ref|ZP_00684061.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] ref|YP_001775508.1| phage-related integrase [Xylella fastidiosa M12] gb|EAO12603.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] gb|EAO14134.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] gb|EAO30402.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] gb|EAO31386.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] gb|ACA11878.1| phage-related integrase [Xylella fastidiosa M12] Length = 339 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 173/338 (51%), Positives = 227/338 (67%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 ++YYYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + + Sbjct: 23 VVYYYYDHGGKPRKETPLGRDYGLAIQRWAELE-HAQITPAIAVTFRHVAERYRAEVIPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T+R +L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KAYNTQRMHHIYLNYLLKFFDDPPAPFESIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V+ANR+ AL SH+WN AR++G+TDLPNPC GI+ +E GRDVY+ D Y V++ + Sbjct: 127 ---VSANREVALFSHLWNWARSKGITDLPNPCGGIRRNKERGRDVYIDDTTYRAVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT K+ I ITGEL VL+ +IL Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVNMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIL 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 ARKR + K+ +TRL+V+E+G L ++ L RF K R AGI FQFRDLRAKA TDK Sbjct: 244 ARKRGM--KLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SVT TE YVRKRRG KVTPT+ Sbjct: 302 ADLAGDMRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR 339 >ref|YP_001775901.1| phage-related integrase [Xylella fastidiosa M12] gb|ACA12271.1| phage-related integrase [Xylella fastidiosa M12] Length = 339 Score = 333 bits (854), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 173/338 (51%), Positives = 227/338 (67%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 ++YYYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + + Sbjct: 23 VVYYYYDHGGKPRKETPLGRDYGLAIQRWAELE-HAQITPAIAVTFRHVAERYRAEVIPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T+R +L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KAYNTQRMHHIYLNYLLKFFDDPPAPFESIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V+ANR+ AL SH+WN AR++G+TDLPNPC GI+ +E GRDVY+ D Y V++ + Sbjct: 127 ---VSANREVALFSHLWNWARSKGITDLPNPCGGIRRNKERGRDVYIDDTTYRAVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT K+ I ITGEL VL+ +IL Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVNMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIL 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 ARKR + K+ +TRL+V+E+G L ++ L RF K R AGI FQFRDLRAKA TDK Sbjct: 244 ARKRGM--KLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEIFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SVT TE YVRKRRG KVTPT+ Sbjct: 302 ADFAGDMRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR 339 >ref|NP_298931.1| phage-related integrase [Xylella fastidiosa 9a5c] gb|AAF84451.1|AE003991_3 phage-related integrase [Xylella fastidiosa 9a5c] Length = 339 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 170/338 (50%), Positives = 227/338 (67%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 +++YYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + + Sbjct: 23 VVHYYYDHGGKPRKETPLGRDYGLAIKRWAELE-HAQITPAIAVTFRHVAERYRAEVIPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T+R +L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KAHNTQRMHHIYLNYLLQFFDDPPAPFESIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V+ANR+ AL SH+WN AR++G+TDLPNPCAGI+ +E GRDVY+ D Y V++ + Sbjct: 127 ---VSANREVALFSHLWNWARSKGITDLPNPCAGIRRNKESGRDVYIDDATYHAVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT K+ I ITGEL +L+ +IL Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAILIKRIL 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 ARKR + K+ +TRL+V+E+G L ++ L RF K R AGI FQFRDLRAKA TDK Sbjct: 244 ARKRGM--KLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SV TE YVRKR+G KVTPT+ Sbjct: 302 ADLAGDMRQAQAQLGHASVVMTEHYVRKRKGAKVTPTR 339 >ref|ZP_00652349.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] ref|ZP_00684131.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] gb|EAO12872.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Dixon] gb|EAO30335.1| Phage integrase:Phage integrase, N-terminal SAM-like [Xylella fastidiosa Ann-1] Length = 339 Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 172/338 (50%), Positives = 227/338 (67%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 ++YYYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + + Sbjct: 23 VVYYYYDHGGKPRKETPLGRDYGLAIQRWAELE-HAQITPAIAVTFRHVAERYRAEVIPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T+R +L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KAYNTQRMHHIYLNYLLKFFDDPPAPFESIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V+ANR+ AL SH+WN AR++G+TDLPNPC GI+ +E GRDVY+ D Y V++ + Sbjct: 127 ---VSANREVALFSHLWNWARSKGITDLPNPCGGIRRNKERGRDVYIDDTTYRAVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT K+ I ITGEL VL+ +IL Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVNMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIL 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 ARKR + K+ +TRL+V+E+G L ++ L RF K R AGI FQFRDLRAKA TDK Sbjct: 244 ARKRGM--KLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SVT TE YVRKR+G KVTPT+ Sbjct: 302 ADLAGDMRQAQAQLGHASVTMTEHYVRKRKGAKVTPTR 339 >emb|CCD30102.1| Phage integrase family protein [Candidatus Glomeribacter gigasporarum BEG34] Length = 358 Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 173/342 (50%), Positives = 233/342 (68%), Gaps = 14/342 (4%) Query: 2 IYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLDN 61 +YYYYD GG PR+EIPLG+++++AVRKW+ELEA S +VTFR+A E Y + + Sbjct: 25 LYYYYDTGGVPRKEIPLGNDFIQAVRKWSELEAETEPRAS-IVTFRHAAERYIRDTLPLK 83 Query: 62 SPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGDE 121 S T++ ++ L EFFD+PPAPL+EIKP+++RQY+ WR + ++ L + G + KG+E Sbjct: 84 SANTQKVEMFAMVKLMEFFDDPPAPLKEIKPVNIRQYLDWRIRNARERLIKLGRKPKGNE 143 Query: 122 GRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGR-DVYVYDDIYSQVWEKSG 180 G+V ANR+K L SH+WN AR G DL NPC GIK ++E+GR D+Y+ DD+Y +V+E + Sbjct: 144 GQVRANREKQLFSHIWNKAREWGYVDLANPCVGIKGYKEKGRQDIYIRDDLYQRVYEHAK 203 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G R +DVL+++E I EG + V Q KT +KVRI I GEL+ L+++I Sbjct: 204 QPLRDAMDLAYLTGQRPSDVLEMNEYAIDEGCLVVQQGKTGTKVRIAIVGELQALLERIR 263 Query: 241 ARK-----RNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAK 295 RK RN L+V+E GQ T L+ F ARE AGI FQFRDLRAK Sbjct: 264 TRKSKYNPRNFA-------LIVDERGQQFTLGRLQDAFAVAREKAGIRPEAFQFRDLRAK 316 Query: 296 AGTDKTDSEGVRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 A +DK + + +AQ QLGH SVT TE Y+R RRG+KV PTK Sbjct: 317 AASDKAEDTDLMSAQYQLGHASVTMTEHYIRNRRGKKVAPTK 358 >ref|YP_001775073.1| phage-related integrase [Xylella fastidiosa M12] gb|ACA11443.1| phage-related integrase [Xylella fastidiosa M12] Length = 339 Score = 331 bits (849), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 171/338 (50%), Positives = 227/338 (67%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 ++YYYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + + Sbjct: 23 VVYYYYDHGGKPRKETPLGRDYGLAIKRWAELE-HAQITPAIAVTFRHVAERYRAEVIPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T++ +L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KARSTQQMHHIYLNYLLKFFDDPPAPFESIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V+ANR+ AL SH+WN AR++G+TDLPNPC GI+ +E GRDVY+ D Y V++ + Sbjct: 127 ---VSANREVALFSHLWNWARSKGITDLPNPCGGIRRNKERGRDVYIDDTTYRAVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT K+ I ITGEL VL+ +IL Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVNMDERHIVNGALEICQAKTGVKLAIAITGELAVLIKRIL 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 ARKR + K+ +TRL+V+E+G L ++ L RF K R AGI FQFRDLRAKA TDK Sbjct: 244 ARKRGM--KLRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SVT TE YVRKR+G KVTPT+ Sbjct: 302 ADLAGDMRQAQAQLGHASVTMTEHYVRKRKGAKVTPTR 339 >ref|ZP_07265399.1| Phage integrase:Phage integrase, N-terminal SAM-like protein [Pseudomonas syringae pv. syringae 642] Length = 344 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/340 (50%), Positives = 230/340 (67%), Gaps = 21/340 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPST--VSKVVTFRYACEVYQQKYM 58 ++YYYYD GG+PR+EIPLGS+Y A+ ++A+LE S+ V +V+TF Y E Y + + Sbjct: 23 VVYYYYDLGGSPRKEIPLGSDYGMAIVEYAKLEKSRTSSALVQQVLTFAYVAEKYMAEVV 82 Query: 59 LDNSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVK 118 SP T+++ R+ L +FFD+PPAPLE I+P HV QY+ R Sbjct: 83 PTKSPATQKDNARELKQLLKFFDDPPAPLEAIEPQHVVQYLRQR---------------- 126 Query: 119 GDEGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEK 178 G V ANR+KAL+S +WN AR+ G T L NPCAG+K +E GRD Y+ D++++ V+ Sbjct: 127 GKTAPVRANREKALLSAIWNFARSAGYTALANPCAGVKGHKEVGRDHYIEDEMFALVYSH 186 Query: 179 SGQVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDK 238 + Q LR+A+DL YL G R+AD LK+DE+ IREG + V Q KTN+K RIEITGELKV++D+ Sbjct: 187 AEQPLRDALDLFYLTGQRIADTLKMDERDIREGRLWVQQGKTNAKRRIEITGELKVVIDR 246 Query: 239 ILARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGT 298 I+ RK ++ T+RL+V + GQP+T LR RFD ARE AG+ EFQ RDLRAKAGT Sbjct: 247 IMTRKEG--HRIRTSRLIVMDNGQPMTSSMLRGRFDAAREAAGVEKGEFQMRDLRAKAGT 304 Query: 299 DKTDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 DK +S G + A+ QLGH +V TE Y+RKR G+KVTPTK Sbjct: 305 DKAESSGDILQARDQLGHTTVVMTENYIRKRIGKKVTPTK 344 >ref|NP_779231.1| phage-related integrase [Xylella fastidiosa Temecula1] ref|YP_001829785.1| integrase family protein [Xylella fastidiosa M23] gb|AAO28880.1| phage-related integrase [Xylella fastidiosa Temecula1] gb|ACB92511.1| integrase family protein [Xylella fastidiosa M23] gb|ADN64029.1| integrase family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 339 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 171/338 (50%), Positives = 225/338 (66%), Gaps = 22/338 (6%) Query: 1 MIYYYYDAGGTPRREIPLGSNYVEAVRKWAELEAMPPSTVSKVVTFRYACEVYQQKYMLD 60 ++YYYYD GG PR+E PLG +Y A+++WAELE T + VTFR+ E Y+ + Sbjct: 23 VVYYYYDHGGKPRKETPLGRDYGLAIKRWAELE-HAQITPAIAVTFRHVAERYRAEVTPT 81 Query: 61 NSPKTRREKLRQFPFLFEFFDNPPAPLEEIKPIHVRQYMAWRSKKRQDSLREKGLEVKGD 120 + T+R + R L +FFD+PPAP E IKP+++RQY+ WR+ K Sbjct: 82 KAYNTQRVEHRCLAPLLKFFDDPPAPFEAIKPVNIRQYLDWRTSK--------------- 126 Query: 121 EGRVAANRDKALISHVWNAARAEGLTDLPNPCAGIKSFREEGRDVYVYDDIYSQVWEKSG 180 V ANR+ ++ SH+WN AR++G+TDLPNPC GI+ + GRDVYV D Y V++ + Sbjct: 127 ---VIANREVSVFSHLWNWARSKGITDLPNPCGGIRRNKATGRDVYVDDTTYRSVYQAAD 183 Query: 181 QVLREAMDLAYLLGGRVADVLKVDEKHIREGAIEVTQNKTNSKVRIEITGELKVLVDKIL 240 Q LR+AMDLAYL G RV+DV+ +DE+HI GA+E+ Q KT +K+ I +TGEL VL+ +I Sbjct: 184 QTLRDAMDLAYLTGQRVSDVVSMDERHIVNGALEICQAKTGAKLAITVTGELAVLIKRIF 243 Query: 241 ARKRNIVGKVTTTRLLVNEEGQPLTYETLRSRFDKAREDAGIPFAEFQFRDLRAKAGTDK 300 RKR + K+ +TRL+V+ EG L+ LR RFDKAR AG+ FQFRDLRAKA TDK Sbjct: 244 DRKRGM--KLRSTRLIVDAEGLELSRIGLRYRFDKARAAAGVAKEVFQFRDLRAKAATDK 301 Query: 301 TDSEG-VRAAQGQLGHKSVTTTEIYVRKRRGQKVTPTK 337 D G +R AQ QLGH SVT TE YVRKRRG KVTPT+ Sbjct: 302 ADLAGDIRQAQAQLGHASVTMTEHYVRKRRGAKVTPTR 339