BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0058.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776855.1| hypothetical protein Hsero_3467 [Herbaspiril... 327 5e-88 ref|ZP_08272890.1| hypothetical protein IMCC9480_3343 [Oxalobact... 192 1e-47 ref|YP_004618612.1| membrane protein [Ramlibacter tataouinensis ... 181 2e-44 ref|YP_001099084.1| hypothetical protein HEAR0763 [Herminiimonas... 174 4e-42 ref|ZP_03542035.1| conserved hypothetical protein [Comamonas tes... 172 2e-41 ref|YP_004152656.1| hypothetical protein Varpa_0323 [Variovorax ... 154 5e-36 ref|NP_639320.1| hypothetical protein XCC3981 [Xanthomonas campe... 138 3e-31 gb|AEL05216.1| lipoprotein, putative [Xanthomonas campestris pv.... 138 3e-31 ref|YP_001905577.1| hypothetical protein xccb100_4172 [Xanthomon... 137 4e-31 ref|YP_003279443.1| hypothetical protein CtCNB1_3401 [Comamonas ... 135 2e-30 >ref|YP_003776855.1| hypothetical protein Hsero_3467 [Herbaspirillum seropedicae SmR1] gb|ADJ64947.1| hypothetical protein Hsero_3467 [Herbaspirillum seropedicae SmR1] Length = 245 Score = 327 bits (837), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 168/168 (100%), Positives = 168/168 (100%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 60 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA Sbjct: 78 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 137 Query: 61 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 120 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE Sbjct: 138 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 197 Query: 121 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN 168 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN Sbjct: 198 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN 245 >ref|ZP_08272890.1| hypothetical protein IMCC9480_3343 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33637.1| hypothetical protein IMCC9480_3343 [Oxalobacteraceae bacterium IMCC9480] Length = 162 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 109/163 (66%), Positives = 128/163 (78%), Gaps = 1/163 (0%) Query: 5 MAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAAVVAF 64 M +FGLVHG++A LFA AL LIAIAA MG+ AV W AQA+I A+GIL AVVA Sbjct: 1 MRLFGLVHGLMAFLFACAALMLIAIAANMGWMAVTGTWDRSAAQAVIGALGILTVAVVAL 60 Query: 65 QIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEELVYA 124 QIAETI EEEV+RDA+ISAPTRVRRFLSRF VV+VVAL+IE LV TF+A E+P +L+YA Sbjct: 61 QIAETIIEEEVIRDADISAPTRVRRFLSRFLVVIVVALSIEGLVATFKA-QEDPMQLLYA 119 Query: 125 AALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLD 167 A++L G G LLAAWG FI+ NR AEELEP AM +AK ED+KL Sbjct: 120 ASMLVGVGVLLAAWGVFIHLNRSAEELEPGAMADAKSEDQKLS 162 >ref|YP_004618612.1| membrane protein [Ramlibacter tataouinensis TTB310] gb|AEG92593.1| candidate membrane protein [Ramlibacter tataouinensis TTB310] Length = 168 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 109/168 (64%), Positives = 130/168 (77%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 60 +K + +F +HGVIAVLFAA AL L+ +AAR+ + AV AQ +IEAIG+LAAA Sbjct: 1 MKVLSRIFSSIHGVIAVLFAAAALVLVFVAARIAWTAVSGALDEGAAQGVIEAIGVLAAA 60 Query: 61 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 120 VVA QIA+TITEEE++R +ISAPTR RRFLSRF VVVVVALAIE LV F A+HE+ E Sbjct: 61 VVALQIAQTITEEEIIRGVDISAPTRARRFLSRFMVVVVVALAIEGLVAAFTAIHEDLAE 120 Query: 121 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN 168 LVYAAALL TGALLAAWG FI+ NR AEELEP+AM + K+ED+KLD Sbjct: 121 LVYAAALLLSTGALLAAWGVFIHFNREAEELEPEAMRKTKQEDRKLDQ 168 >ref|YP_001099084.1| hypothetical protein HEAR0763 [Herminiimonas arsenicoxydans] emb|CAL60957.1| conserved hypothetical protein; putative membrane protein [Herminiimonas arsenicoxydans] Length = 167 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 104/160 (65%), Positives = 130/160 (81%) Query: 7 MFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAAVVAFQI 66 +F L+HG++A+ FA AL LIAIA R+G++ +M G AQ +IEA+G+LAAAVVA QI Sbjct: 7 VFRLMHGLMAIFFALAALILIAIAVRIGWQGLMGGLDQAAAQTIIEAVGLLAAAVVALQI 66 Query: 67 AETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEELVYAAA 126 AETI EEE+VRDA+ISAPTRVRRFLSRFFVV++VALAIE LV TF+A+HE+ +L YAA+ Sbjct: 67 AETIVEEEIVRDADISAPTRVRRFLSRFFVVIIVALAIEGLVATFKAMHEDTAQLPYAAS 126 Query: 127 LLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKL 166 +L T LLAAWG F++ NR AEELEP+AME+AK ED KL Sbjct: 127 ILMATALLLAAWGVFVHLNRSAEELEPEAMEDAKNEDHKL 166 >ref|ZP_03542035.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gb|EED66321.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 169 Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 89/168 (52%), Positives = 120/168 (71%), Gaps = 1/168 (0%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 60 +K + ++ + H +IA+LF AL+L+ IA + ++ G +EA+GILA+ Sbjct: 1 MKLVHLIYAVTHSLIALLFGFAALSLVWIAVTKAWGVIVGGLQPESTLHAVEALGILASG 60 Query: 61 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 120 VVA QI++T+ EEEVVR+A+IS PTRVRRFLSRF VV+VVALAIE LV TF+A E PE+ Sbjct: 61 VVALQISQTMVEEEVVREAHISGPTRVRRFLSRFMVVLVVALAIEGLVATFKA-QETPEQ 119 Query: 121 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN 168 L+Y AALL G LLA WG F++ NR AEELEP+AM++AK ED K+ + Sbjct: 120 LLYPAALLVSVGVLLAGWGVFVHLNRSAEELEPEAMQQAKSEDHKVSD 167 >ref|YP_004152656.1| hypothetical protein Varpa_0323 [Variovorax paradoxus EPS] gb|ADU34545.1| hypothetical protein Varpa_0323 [Variovorax paradoxus EPS] Length = 166 Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 98/167 (58%), Positives = 131/167 (78%), Gaps = 1/167 (0%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 60 +K I A++ +H ++A+ FA ++ L+ IAAR G+ AVM+G GLP A+A+IEA+G+LAA Sbjct: 1 MKLIHALYAAIHALMALAFAIASIVLVVIAARAGWGAVMQGLGLPTAEAIIEAVGVLAAG 60 Query: 61 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 120 VVA QI++T+ EEEV+R+A+ISAPTRVRRFLSRF VV+VVA+A+E LV TF+A E PE Sbjct: 61 VVALQISQTVLEEEVLREAHISAPTRVRRFLSRFMVVIVVAVAVEGLVATFKA-REAPEL 119 Query: 121 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLD 167 +++AA +L G L+A WG FI NR AEELEP+AMEEAK ED+KL Sbjct: 120 MLHAATMLGAVGLLMAGWGLFIRFNRYAEELEPEAMEEAKSEDRKLK 166 >ref|NP_639320.1| hypothetical protein XCC3981 [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_245130.1| hypothetical protein XC_4071 [Xanthomonas campestris pv. campestris str. 8004] gb|AAM43202.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY51110.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 182 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/170 (44%), Positives = 106/170 (62%), Gaps = 3/170 (1%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGL---PQAQALIEAIGIL 57 +K + +F H VI F A L+ +AA + G + + ++EAIG+L Sbjct: 12 MKLLSHLFRAGHFVILAFFVLCACGLVGMAALELWHGFTPGGDMVVRDRFNVVLEAIGLL 71 Query: 58 AAAVVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEE 117 A+V ++ +TI EEE++RD +S PTRVRR+LSRFFVV+V+ALAIE LV F +H++ Sbjct: 72 TVALVTLELGQTIFEEEILRDVKVSGPTRVRRYLSRFFVVIVIALAIETLVSIFELMHDD 131 Query: 118 PEELVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLD 167 P +L YAA++ G LL AWG F+ NR AEELEP+AM E K ED ++ Sbjct: 132 PAKLPYAASVGFCAGLLLIAWGVFVKLNRSAEELEPEAMAETKREDNEVQ 181 >gb|AEL05216.1| lipoprotein, putative [Xanthomonas campestris pv. raphani 756C] Length = 171 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/170 (44%), Positives = 106/170 (62%), Gaps = 3/170 (1%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGL---PQAQALIEAIGIL 57 +K + +F H VI F A L+ +AA + G + + ++EAIG+L Sbjct: 1 MKLLSHLFRAGHFVILAFFVLCACGLVGMAALELWHGFTPGGDMVVRDRFNVVLEAIGLL 60 Query: 58 AAAVVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEE 117 A+V ++ +TI EEE++RD +S PTRVRR+LSRFFVV+V+ALAIE LV F +H++ Sbjct: 61 TVALVTLELGQTIFEEEILRDVKVSGPTRVRRYLSRFFVVIVIALAIETLVSIFELMHDD 120 Query: 118 PEELVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLD 167 P +L YAA++ G LL AWG F+ NR AEELEP+AM E K ED ++ Sbjct: 121 PAKLPYAASVGFCAGLLLIAWGVFVKLNRSAEELEPEAMAETKREDNEVQ 170 >ref|YP_001905577.1| hypothetical protein xccb100_4172 [Xanthomonas campestris pv. campestris str. B100] emb|CAP53541.1| conserved putative membrane protein [Xanthomonas campestris pv. campestris] Length = 219 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/170 (44%), Positives = 106/170 (62%), Gaps = 3/170 (1%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGL---PQAQALIEAIGIL 57 +K + +F H VI F A L+ +AA + G + + ++EAIG+L Sbjct: 49 MKLLSHLFRAGHFVILAFFVLCACGLVGMAALELWHGFTPGGDMVVRDRFNVVLEAIGLL 108 Query: 58 AAAVVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEE 117 A+V ++ +TI EEE++RD +S PTRVRR+LSRFFVV+V+ALAIE LV F +H++ Sbjct: 109 TVALVTLELGQTIFEEEILRDVKVSGPTRVRRYLSRFFVVIVIALAIETLVSIFELMHDD 168 Query: 118 PEELVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLD 167 P +L YAA++ G LL AWG F+ NR AEELEP+AM E K ED ++ Sbjct: 169 PAKLPYAASVGFCAGLLLIAWGVFVKLNRSAEELEPEAMAETKREDNEVQ 218 >ref|YP_003279443.1| hypothetical protein CtCNB1_3401 [Comamonas testosteroni CNB-2] ref|ZP_07043818.1| hypothetical protein CTS44_06449 [Comamonas testosteroni S44] gb|ACY34147.1| conserved hypothetical protein [Comamonas testosteroni CNB-2] gb|EFI62554.1| hypothetical protein CTS44_06449 [Comamonas testosteroni S44] Length = 169 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/168 (53%), Positives = 121/168 (72%), Gaps = 1/168 (0%) Query: 1 VKKIMAMFGLVHGVIAVLFAAGALALIAIAARMGFEAVMEGWGLPQAQALIEAIGILAAA 60 +K + ++ L H +IA+LF AL LI +A + + G ++EA+GILA+ Sbjct: 1 MKFVHWLYTLTHSLIALLFGLAALCLIWMAVTKAWAVIAAGLEPEATLHVVEALGILASG 60 Query: 61 VVAFQIAETITEEEVVRDANISAPTRVRRFLSRFFVVVVVALAIEALVMTFRAVHEEPEE 120 VVA QI++T+ EEEVVRDA+IS PTRVRRFLSRF VV+VVALA+E LV TF+A E+PE+ Sbjct: 61 VVALQISQTVIEEEVVRDAHISGPTRVRRFLSRFMVVLVVALAVEGLVATFKA-QEQPEK 119 Query: 121 LVYAAALLAGTGALLAAWGYFIYCNRVAEELEPDAMEEAKEEDKKLDN 168 L+Y+AAL+ G L+ WG F++ NR AEELEP+AMEEAK ED+K+ N Sbjct: 120 LLYSAALVIAVGMLMVGWGVFVHLNRSAEELEPEAMEEAKSEDRKVSN 167