BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0056.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776853.1| branched-chain amino acid ABC transporter pe... 754 0.0 ref|YP_001099059.1| putative amino acid ABC transporter [Hermini... 584 e-164 ref|YP_001352355.1| ABC-type branched-chain amino acid transport... 562 e-158 ref|ZP_08273712.1| putative amino acid ABC transporter [Oxalobac... 561 e-158 ref|YP_004751555.1| putative amino acid ABC transporter [Collimo... 554 e-155 ref|YP_004751556.1| leucine-, isoleucine-, valine-, threonine-, ... 549 e-154 ref|ZP_08401078.1| extracellular ligand-binding receptor [Rubriv... 513 e-143 ref|YP_002944621.1| extracellular ligand-binding receptor [Vario... 512 e-143 ref|YP_004155135.1| extracellular ligand-binding receptor [Vario... 511 e-143 ref|ZP_08406491.1| extracellular ligand-binding receptor [Hylemo... 501 e-139 >ref|YP_003776853.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64945.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/380 (100%), Positives = 380/380 (100%) Query: 1 MKLKSAIIPLTAAIGLAFAGAAYSQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNA 60 MKLKSAIIPLTAAIGLAFAGAAYSQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNA Sbjct: 1 MKLKSAIIPLTAAIGLAFAGAAYSQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNA 60 Query: 61 KGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDA 120 KGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDA Sbjct: 61 KGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDA 120 Query: 121 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQ 180 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQ Sbjct: 121 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQ 180 Query: 181 GVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQ 240 GVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQ Sbjct: 181 GVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQ 240 Query: 241 MKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKK 300 MKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKK Sbjct: 241 MKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKK 300 Query: 301 FGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKD 360 FGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKD Sbjct: 301 FGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKD 360 Query: 361 GSLTLYTYKGGQRTLLAVTK 380 GSLTLYTYKGGQRTLLAVTK Sbjct: 361 GSLTLYTYKGGQRTLLAVTK 380 >ref|YP_001099059.1| putative amino acid ABC transporter [Herminiimonas arsenicoxydans] emb|CAL60932.1| putative ABC-type branched-chain amino acid transport system, periplasmic component [Herminiimonas arsenicoxydans] Length = 381 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 291/381 (76%), Positives = 336/381 (88%), Gaps = 1/381 (0%) Query: 1 MKLKSAIIPLTAAIGLAFAGAAYSQE-VVKIAHVGPLSGPNAHMGKDNENGARMAVDELN 59 M+ KS +IPL A+ A AG A +QE V+KI V P++G +AHMGKDNENGARMAV++LN Sbjct: 1 MQFKSKMIPLAGALAFALAGGAAAQEQVIKIGSVAPITGTDAHMGKDNENGARMAVEDLN 60 Query: 60 AKGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSD 119 AKG TIGGKKVKF+L+ EDDASDPKQATA A KLVD V AVIGHLNSGTTIPAS+IY++ Sbjct: 61 AKGTTIGGKKVKFQLLAEDDASDPKQATAAAQKLVDAGVVAVIGHLNSGTTIPASRIYAN 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYG 179 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLG LG+YAV+ LG K +AVIDDRTAYG Sbjct: 121 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGQVLGQYAVKTLGGKSVAVIDDRTAYG 180 Query: 180 QGVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLR 239 QGVADEFAKG KAAGG+IV +QYTN+KATDFN+ILTS+K KKPD++FFGGMDAVGGPMLR Sbjct: 181 QGVADEFAKGVKAAGGSIVASQYTNNKATDFNSILTSIKAKKPDIIFFGGMDAVGGPMLR 240 Query: 240 QMKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKK 299 QMKQLGI+AKFMGGDGICTGSLPGLAG LGD+QV+CAEAGGV EA +KG++DFRA+YKK Sbjct: 241 QMKQLGINAKFMGGDGICTGSLPGLAGTALGDNQVVCAEAGGVPEARRKGVEDFRASYKK 300 Query: 300 KFGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIK 359 +FG++VVY AAYAYDAT V +AM KA S +P KYLPELAK ++ G+TG IAFDAKGDIK Sbjct: 301 RFGVEVVYTAAYAYDATNAVVEAMKKANSWEPAKYLPELAKSNYPGITGTIAFDAKGDIK 360 Query: 360 DGSLTLYTYKGGQRTLLAVTK 380 DG+LTLYT++GG+R +LAVTK Sbjct: 361 DGTLTLYTFRGGKREMLAVTK 381 >ref|YP_001352355.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR89836.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 381 Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust. Identities = 285/381 (74%), Positives = 330/381 (86%), Gaps = 1/381 (0%) Query: 1 MKLKSAIIPLTAAIGLAFAGAAYSQE-VVKIAHVGPLSGPNAHMGKDNENGARMAVDELN 59 M+ K+ +IPLT A+ LA AG+ +QE +VKI HVGP++G +AHMGKDNENGAR+AV+ELN Sbjct: 1 MQFKTKMIPLTGAVLLALAGSTLAQEQIVKIGHVGPVTGTDAHMGKDNENGARLAVEELN 60 Query: 60 AKGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSD 119 AKG I GKKVK + + EDDA+DPKQATA ATKLVD VA VIGHLNSG TIPAS+IY++ Sbjct: 61 AKGVVINGKKVKLQYMPEDDAADPKQATAAATKLVDSNVAVVIGHLNSGATIPASRIYAN 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYG 179 AGI Q+SPS+T+PKYTQQGFKTAFRVVANDAQLG LG+YAV+ L K +AVIDDRTAYG Sbjct: 121 AGIVQISPSSTSPKYTQQGFKTAFRVVANDAQLGRVLGQYAVKSLAAKNVAVIDDRTAYG 180 Query: 180 QGVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLR 239 QGVA+EFAKG KAAGGT+V +QYTN+KATDFNAILT++K KKPDV+FFGGMDAVGGPML+ Sbjct: 181 QGVAEEFAKGVKAAGGTVVASQYTNNKATDFNAILTAIKAKKPDVIFFGGMDAVGGPMLQ 240 Query: 240 QMKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKK 299 QMKQLGI+AKFMGGDGICTGSLPGLAG GLG++ V CAEAGGV++A K G+D FRAAYKK Sbjct: 241 QMKQLGINAKFMGGDGICTGSLPGLAGAGLGENNVYCAEAGGVEDARKAGLDKFRAAYKK 300 Query: 300 KFGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIK 359 +FGIDV+Y AAYAYDAT V DAM KA S + KYLPEL KIS+ GVTG IAFDAKGDIK Sbjct: 301 RFGIDVIYTAAYAYDATYAVVDAMQKAKSWESAKYLPELTKISYPGVTGTIAFDAKGDIK 360 Query: 360 DGSLTLYTYKGGQRTLLAVTK 380 DG+LTLYTY+GG+RT LAV K Sbjct: 361 DGTLTLYTYRGGKRTELAVVK 381 >ref|ZP_08273712.1| putative amino acid ABC transporter [Oxalobacteraceae bacterium IMCC9480] gb|EGF32816.1| putative amino acid ABC transporter [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 288/383 (75%), Positives = 323/383 (84%), Gaps = 3/383 (0%) Query: 1 MKLKSAIIPLTAAIGLAFAGAAYSQE-VVKIAHVGPLSGPNAHMGKDNENGARMAVDELN 59 M+ + +IPL AA+ AFAG A +QE V+KI HVGP+SG AH+GKDNENGA+MA+DELN Sbjct: 1 MQFNTKMIPLAAALAFAFAGTASAQEQVIKIGHVGPISGAIAHLGKDNENGAKMAIDELN 60 Query: 60 AKGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSD 119 AKG IGGKKVKFEL+ EDDA+DPKQ TAVA KLVD KV VIGHLNSGTTIPASKIY + Sbjct: 61 AKGVVIGGKKVKFELLAEDDAADPKQGTAVAQKLVDAKVNGVIGHLNSGTTIPASKIYYE 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYG 179 AGIPQ+SPSATNPKYTQQGFKTAFRVVAND QLG LG+YAVQ L K++AVIDDRTAYG Sbjct: 121 AGIPQISPSATNPKYTQQGFKTAFRVVANDGQLGGTLGRYAVQVLKAKRVAVIDDRTAYG 180 Query: 180 QGVADEFAKGAK--AAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPM 237 QGVA+EF KGAK + G IV TQYTNDKATDFNAILTS+K K PDVVFFGGMDAV GPM Sbjct: 181 QGVAEEFIKGAKGKSTGVEIVATQYTNDKATDFNAILTSIKSKNPDVVFFGGMDAVAGPM 240 Query: 238 LRQMKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAY 297 LRQMKQLGI+AKFMGGDGICT +L LAGD + D+QV+CAEAGGV++A KKGM+DF+AAY Sbjct: 241 LRQMKQLGINAKFMGGDGICTEALATLAGDAMADNQVVCAEAGGVEDAQKKGMEDFKAAY 300 Query: 298 KKKFGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGD 357 KKKFG+DV A Y YD+ MT+ DAM KAGSADP KY P LAKI HKGVTG IAFD KGD Sbjct: 301 KKKFGVDVQIYAPYVYDSVMTMVDAMVKAGSADPAKYAPVLAKIQHKGVTGNIAFDDKGD 360 Query: 358 IKDGSLTLYTYKGGQRTLLAVTK 380 IKDG+LTLY+YKGG+R LAV K Sbjct: 361 IKDGTLTLYSYKGGKRLQLAVVK 383 >ref|YP_004751555.1| putative amino acid ABC transporter [Collimonas fungivorans Ter331] gb|AEK60732.1| putative amino acid ABC transporter [Collimonas fungivorans Ter331] Length = 380 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 279/377 (74%), Positives = 320/377 (84%), Gaps = 1/377 (0%) Query: 5 SAIIPLTAAIGLAFAGAAYSQE-VVKIAHVGPLSGPNAHMGKDNENGARMAVDELNAKGF 63 + +IPL AAI L+ + +A++QE VVKIAHVGP++GP AH+GKDNENGARMA++ELN +G Sbjct: 4 TKMIPLAAAIALSLSASAHAQEQVVKIAHVGPITGPIAHIGKDNENGARMAIEELNKQGL 63 Query: 64 TIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDAGIP 123 T+ GKK +F L+ EDDASDPKQATAVA KLVD KVA VIGH+NSGT+IPASKIY DAGIP Sbjct: 64 TLDGKKTRFVLMAEDDASDPKQATAVAQKLVDAKVAGVIGHVNSGTSIPASKIYYDAGIP 123 Query: 124 QVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQGVA 183 Q+SPS T+ KYTQQGF T FRVVAND+QLG ALG+YA + L K AVIDDRTAYGQG+A Sbjct: 124 QISPSTTSAKYTQQGFNTTFRVVANDSQLGGALGRYAAKTLHAKTAAVIDDRTAYGQGLA 183 Query: 184 DEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQMKQ 243 +EF K AKAAG TIV TQYTNDKATDFNAILTS K KKPDVVFFGG+DA GPMLRQMKQ Sbjct: 184 EEFTKAAKAAGMTIVATQYTNDKATDFNAILTSFKAKKPDVVFFGGLDAGAGPMLRQMKQ 243 Query: 244 LGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKKFGI 303 LGI AKFMGGD ICT LP LAGDG+ +DQVICAEAGGV+E+ +KG+D ++ AYK K+G Sbjct: 244 LGIQAKFMGGDAICTSDLPKLAGDGISNDQVICAEAGGVEESARKGLDAYKTAYKIKYGK 303 Query: 304 DVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKDGSL 363 DVV A Y YDA MT+ADAM KA SADPKKYLPELAKI HKGVTG+IAFDAKGDIKDG++ Sbjct: 304 DVVIYAPYTYDALMTMADAMQKAKSADPKKYLPELAKIQHKGVTGMIAFDAKGDIKDGTI 363 Query: 364 TLYTYKGGQRTLLAVTK 380 TLYTY+G QR+ LAVTK Sbjct: 364 TLYTYRGAQRSQLAVTK 380 >ref|YP_004751556.1| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Collimonas fungivorans Ter331] gb|AEK60733.1| Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Collimonas fungivorans Ter331] Length = 383 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 265/357 (74%), Positives = 305/357 (85%) Query: 24 SQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNAKGFTIGGKKVKFELVGEDDASDP 83 +++VKI HVGP++GP+AH+GKD ENGA+MAV+ELNAKG T+GGKK+KF L+ EDDASDP Sbjct: 27 EEQIVKIGHVGPVTGPSAHLGKDMENGAKMAVEELNAKGITLGGKKIKFVLLAEDDASDP 86 Query: 84 KQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDAGIPQVSPSATNPKYTQQGFKTAF 143 KQ TA A KLVD K+ VIGHLNSGTTIPASKIY DAGIPQ+SP+AT+PKYTQQGF + F Sbjct: 87 KQGTAAAQKLVDAKIDGVIGHLNSGTTIPASKIYYDAGIPQISPAATSPKYTQQGFNSVF 146 Query: 144 RVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQGVADEFAKGAKAAGGTIVGTQYT 203 RVVAND QLG LG+YA L K IAVIDDRTAYGQGVA EFAKGAK+AG IV TQ+T Sbjct: 147 RVVANDGQLGGTLGRYAATTLKAKNIAVIDDRTAYGQGVAQEFAKGAKSAGVNIVATQFT 206 Query: 204 NDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQMKQLGISAKFMGGDGICTGSLPG 263 NDKATDFNAILTS+K K PDV+FFGGMDAV GPMLRQMK LGI AKFMGGDG+CT L Sbjct: 207 NDKATDFNAILTSIKAKNPDVIFFGGMDAVAGPMLRQMKALGIKAKFMGGDGMCTAELGK 266 Query: 264 LAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATMTVADAM 323 LAGDGL +DQV+CAEAGGV+E+GKKG++DF+AA++KKF +V A Y+YD+ MT+ +AM Sbjct: 267 LAGDGLINDQVVCAEAGGVEESGKKGLEDFKAAFQKKFNAEVKLYAPYSYDSVMTMVEAM 326 Query: 324 AKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKDGSLTLYTYKGGQRTLLAVTK 380 KA SADPKKYLPEL KI HKGVTG+IAFDAKGDIKDG+LTLYTYK G+RTLL VTK Sbjct: 327 QKANSADPKKYLPELVKIHHKGVTGMIAFDAKGDIKDGTLTLYTYKDGKRTLLTVTK 383 >ref|ZP_08401078.1| extracellular ligand-binding receptor [Rubrivivax benzoatilyticus JA2] gb|EGJ09411.1| extracellular ligand-binding receptor [Rubrivivax benzoatilyticus JA2] Length = 380 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 273/382 (71%), Positives = 308/382 (80%), Gaps = 4/382 (1%) Query: 1 MKLKSAIIPLTAAIGLAFAGAAYSQEVV-KIAHVGPLSGPNAHMGKDNENGARMAVDELN 59 M+ K ++ AAI GA Y+Q+VV KI HVGP SG AH+GKDNENGARMA+DELN Sbjct: 1 MQFKLNVVVGAAAI--LMTGAVYAQDVVVKIGHVGPTSGGIAHLGKDNENGARMAIDELN 58 Query: 60 AKGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSD 119 AKG TIGGKKVK+EL+ EDDA+DPKQ TA A KLVD KV VIGHLNSGTTIPASKIYSD Sbjct: 59 AKGATIGGKKVKWELLAEDDAADPKQGTAAAQKLVDSKVNGVIGHLNSGTTIPASKIYSD 118 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYG 179 AGIPQ+SPSATNPKYT+ G+KT FRVVA+D LG LGKYAV +L K IAVIDDRTAYG Sbjct: 119 AGIPQISPSATNPKYTRNGYKTTFRVVADDVHLGGTLGKYAVTELKGKNIAVIDDRTAYG 178 Query: 180 QGVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLR 239 QGVA+EFAKG KAAGG +VG ++TNDKATDF AILT LK KKPDV+FFGGMDAV GPMLR Sbjct: 179 QGVAEEFAKGVKAAGGNVVGREFTNDKATDFTAILTGLKAKKPDVIFFGGMDAVAGPMLR 238 Query: 240 QMKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKK 299 QMKQLGI+AKFMGGDGIC+G LP LA + D QV CAEAGGVD +GK +D F+A +KK Sbjct: 239 QMKQLGITAKFMGGDGICSGELPKLAAGTMADSQVFCAEAGGVDGSGKVKLDKFKADFKK 298 Query: 300 KFGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKIS-HKGVTGVIAFDAKGDI 358 KF DV A Y YDATM +ADAM KAGSADP KYLP LAK S ++GVTG IAFD KGDI Sbjct: 299 KFNADVQIYAPYVYDATMVMADAMIKAGSADPAKYLPVLAKTSGYEGVTGTIAFDEKGDI 358 Query: 359 KDGSLTLYTYKGGQRTLLAVTK 380 K+G+LTLYTYK G+R +AV + Sbjct: 359 KNGALTLYTYKAGKREQIAVVR 380 >ref|YP_002944621.1| extracellular ligand-binding receptor [Variovorax paradoxus S110] gb|ACS19355.1| Extracellular ligand-binding receptor [Variovorax paradoxus S110] Length = 401 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 250/354 (70%), Positives = 294/354 (83%) Query: 27 VVKIAHVGPLSGPNAHMGKDNENGARMAVDELNAKGFTIGGKKVKFELVGEDDASDPKQA 86 +VKI HVGP SG AH+GKDNE GA+MA+++LNAKG IG K KFEL+ EDDA DPKQ Sbjct: 48 IVKIGHVGPTSGAIAHLGKDNELGAKMAIEDLNAKGLKIGDKVAKFELLAEDDAGDPKQG 107 Query: 87 TAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDAGIPQVSPSATNPKYTQQGFKTAFRVV 146 TAVA KLVD KV ++GHLNSGTTIPASK+YSDAGIPQVSPSATNPKYT+QGFKT FRVV Sbjct: 108 TAVAQKLVDSKVNGIVGHLNSGTTIPASKLYSDAGIPQVSPSATNPKYTRQGFKTTFRVV 167 Query: 147 ANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQGVADEFAKGAKAAGGTIVGTQYTNDK 206 A+D QLG LGKYAV+ L K IAVIDDRTAYGQGVA+EF K AKAAGGTIVG ++T DK Sbjct: 168 ADDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEFEKAAKAAGGTIVGHEFTTDK 227 Query: 207 ATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQMKQLGISAKFMGGDGICTGSLPGLAG 266 +TDFNAILT LK KPDV+FFGGMDAVGGPML+Q+KQLG++ KFMGGDG+CTG LP LAG Sbjct: 228 STDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAG 287 Query: 267 DGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATMTVADAMAKA 326 D +G++ V+CAEAGGVD K+ ++DF+A +K K G+DV A Y YDA +A+AM KA Sbjct: 288 DAIGEEMVVCAEAGGVDGDFKQPLEDFKARFKTKNGVDVQIYAPYVYDAVNVLAEAMVKA 347 Query: 327 GSADPKKYLPELAKISHKGVTGVIAFDAKGDIKDGSLTLYTYKGGQRTLLAVTK 380 GSADP+KYLPE+ K+ +KGVTG IAFD KGDIK+G+LTL+TYKGG RT +AV + Sbjct: 348 GSADPEKYLPEVGKVQYKGVTGPIAFDEKGDIKNGALTLFTYKGGVRTQIAVVR 401 >ref|YP_004155135.1| extracellular ligand-binding receptor [Variovorax paradoxus EPS] gb|ADU37024.1| Extracellular ligand-binding receptor [Variovorax paradoxus EPS] Length = 402 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 252/354 (71%), Positives = 294/354 (83%) Query: 27 VVKIAHVGPLSGPNAHMGKDNENGARMAVDELNAKGFTIGGKKVKFELVGEDDASDPKQA 86 VVKI HVGP SGP AH+GKDNE GA+MA+++LNAKG IG K KF LV EDDA DPKQ Sbjct: 49 VVKIGHVGPTSGPIAHLGKDNEFGAKMAIEDLNAKGLKIGDKVAKFVLVPEDDAGDPKQG 108 Query: 87 TAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDAGIPQVSPSATNPKYTQQGFKTAFRVV 146 TAVA KLVD+KV V+GHLNSGTTIPASK+YSDAGIPQVSPSATNPKYT+QGFKT FRVV Sbjct: 109 TAVAQKLVDEKVNGVVGHLNSGTTIPASKLYSDAGIPQVSPSATNPKYTRQGFKTTFRVV 168 Query: 147 ANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQGVADEFAKGAKAAGGTIVGTQYTNDK 206 A+D QLG LGKYAV L K IAVIDDRTAYGQGVA+EF K AKAAGGTIVG ++T DK Sbjct: 169 ADDTQLGGTLGKYAVDTLKGKNIAVIDDRTAYGQGVAEEFEKAAKAAGGTIVGHEFTTDK 228 Query: 207 ATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQMKQLGISAKFMGGDGICTGSLPGLAG 266 +TDFNAILT LK KPDV+FFGGMDAVGGPML+Q+KQLG++ KFMGGDG+CTG LP LAG Sbjct: 229 STDFNAILTKLKAAKPDVLFFGGMDAVGGPMLKQVKQLGLNVKFMGGDGLCTGELPKLAG 288 Query: 267 DGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATMTVADAMAKA 326 D +G+D V+CAEAGGVD K+ ++DF+A +K K G++V A Y YDA +A+AM KA Sbjct: 289 DAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKAKNGVEVQIYAPYVYDAVNVLAEAMVKA 348 Query: 327 GSADPKKYLPELAKISHKGVTGVIAFDAKGDIKDGSLTLYTYKGGQRTLLAVTK 380 GS+DP+KYLPE+ K+ +KGVTG IAFD KGDIK+G+LTL+TYKGG RT +AV + Sbjct: 349 GSSDPEKYLPEVGKLQYKGVTGPIAFDEKGDIKNGALTLFTYKGGVRTQIAVVR 402 >ref|ZP_08406491.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] gb|EGI76387.1| extracellular ligand-binding receptor [Hylemonella gracilis ATCC 19624] Length = 386 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 249/358 (69%), Positives = 286/358 (79%), Gaps = 1/358 (0%) Query: 24 SQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNAKGFTIGGKKVKFELVGEDDASDP 83 + VVKI HVGP+SGP AH+GKDNE GARMA++ELNA G TIGGKKV EL+ EDD +DP Sbjct: 29 ASSVVKIGHVGPVSGPIAHLGKDNELGARMAIEELNAAGVTIGGKKVTLELLAEDDGADP 88 Query: 84 KQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDAGIPQVSPSATNPKYTQQGFKTAF 143 KQ TA A KL D KVA VIGHLNSGTTIPASKIYSDAGIPQ+SPSATNPKYT+QG+KT F Sbjct: 89 KQGTAAAQKLADAKVAGVIGHLNSGTTIPASKIYSDAGIPQISPSATNPKYTRQGYKTTF 148 Query: 144 RVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQGVADEFAKGAKAAGGTIVGTQYT 203 RVVA+D LG LGKYAV L K +AVIDDRTAYGQGVA+EF K A+AAG +V ++T Sbjct: 149 RVVADDVHLGGTLGKYAVGTLAAKNVAVIDDRTAYGQGVAEEFTKAAEAAGAKVVAKEFT 208 Query: 204 NDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQMKQLGISAKFMGGDGICTGSLPG 263 DKATDFNAILTS+KGKKPDVVFFGGMDAV GPML+QMK LGI AKF+GGDGICTG L Sbjct: 209 TDKATDFNAILTSIKGKKPDVVFFGGMDAVAGPMLKQMKALGIEAKFLGGDGICTGELAK 268 Query: 264 LAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATMTVADAM 323 LAGD +G+ +V CAEAGGVD+AGK +D F+A +K K+ +DV A Y YDAT + AM Sbjct: 269 LAGDAIGEGKVFCAEAGGVDDAGKPALDKFKADFKAKYNVDVQIYAPYVYDATKVLVAAM 328 Query: 324 AKAGSADPKKYLPELAKIS-HKGVTGVIAFDAKGDIKDGSLTLYTYKGGQRTLLAVTK 380 KAGS+DP KYLP LA ++GVTG I FD KGDIK+G+LTL+TYK G RT LAV + Sbjct: 329 VKAGSSDPAKYLPVLAATDGYQGVTGTIGFDEKGDIKNGALTLFTYKAGARTQLAVVR 386