BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0053.p (227 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776850.1| ribose 5-phosphate isomerase [Herbaspirillum... 444 e-123 ref|YP_001099397.1| ribose-5-phosphate isomerase A [Herminiimona... 375 e-102 ref|YP_001353998.1| ribose-5-phosphate isomerase A [Janthinobact... 375 e-102 ref|YP_004751954.1| ribose 5-phosphate isomerase A [Collimonas f... 367 e-100 ref|ZP_08275983.1| Ribose 5-phosphate isomerase A [Oxalobacterac... 343 8e-93 ref|ZP_04579253.1| ribose-5-phosphate isomerase A [Oxalobacter f... 326 1e-87 ref|ZP_04577117.1| ribose-5-phosphate isomerase A [Oxalobacter f... 311 6e-83 gb|EGW60169.1| ribose 5-phosphate isomerase [Dechlorosoma suillu... 292 3e-77 ref|YP_004126844.1| ribose 5-phosphate isomerase [Alicycliphilus... 289 2e-76 ref|YP_003047724.1| ribose-5-phosphate isomerase A [Methylotener... 289 2e-76 >ref|YP_003776850.1| ribose 5-phosphate isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ64942.1| ribose 5-phosphate isomerase protein [Herbaspirillum seropedicae SmR1] Length = 223 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 223/223 (100%), Positives = 223/223 (100%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL Sbjct: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS Sbjct: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI Sbjct: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF Sbjct: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 >ref|YP_001099397.1| ribose-5-phosphate isomerase A [Herminiimonas arsenicoxydans] sp|A4G433.1|RPIA_HERAR RecName: Full=Ribose-5-phosphate isomerase A; AltName: Full=Phosphoriboisomerase A; Short=PRI emb|CAL61270.1| ribose 5-phosphate isomerase A (Phosphoriboisomerase A) (PRI) [Herminiimonas arsenicoxydans] Length = 223 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 185/223 (82%), Positives = 207/223 (92%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 MTQDE+KQAVA+AAIEYVV GEIIGVGTGSTANFFIDELGKIK RIKGAVASSEATA+RL Sbjct: 1 MTQDEMKQAVARAAIEYVVPGEIIGVGTGSTANFFIDELGKIKDRIKGAVASSEATAQRL 60 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 +SHGI VFDLNE++ M VYIDGADEI GAMIKGGGAALTREKIVASVA++FVCIADGS Sbjct: 61 KSHGIAVFDLNEIDAMSVYIDGADEITAQGAMIKGGGAALTREKIVASVAKQFVCIADGS 120 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV++LG FPLPVEVIPM+ AVVARKLAALGGEPRLR+KDGKP+VTDNGC+IIDVLGL I Sbjct: 121 KLVDLLGNFPLPVEVIPMAQAVVARKLAALGGEPRLRLKDGKPLVTDNGCFIIDVLGLKI 180 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 DPA++E +INNIVGVVT GLFAR+GA++ LLGTA+GVK+L F Sbjct: 181 QDPAELEAQINNIVGVVTVGLFARRGADIALLGTAEGVKRLTF 223 >ref|YP_001353998.1| ribose-5-phosphate isomerase A [Janthinobacterium sp. Marseille] sp|A6T0F1.1|RPIA_JANMA RecName: Full=Ribose-5-phosphate isomerase A; AltName: Full=Phosphoriboisomerase A; Short=PRI gb|ABR88484.1| ribose 5-phosphate isomerase A [Janthinobacterium sp. Marseille] Length = 223 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/223 (83%), Positives = 205/223 (91%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 MTQDE+KQAVA+AAI+YVV GEIIGVGTGSTANFFIDELGKIK RIKGAVASSEATAERL Sbjct: 1 MTQDEMKQAVARAAIDYVVAGEIIGVGTGSTANFFIDELGKIKDRIKGAVASSEATAERL 60 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 R+HGIT+FDLN++++M VYIDGADEI GAMIKGGGAALTREKIVASVA+KFVCIADGS Sbjct: 61 RAHGITIFDLNDIDSMSVYIDGADEITAQGAMIKGGGAALTREKIVASVAKKFVCIADGS 120 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV+ LGKFPLPVEVIPM+ AVVARKLAALGGEPRLRVKDGK VVTDNGCYIIDVLGL I Sbjct: 121 KLVDKLGKFPLPVEVIPMAQAVVARKLAALGGEPRLRVKDGKAVVTDNGCYIIDVLGLQI 180 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 DPA +E +IN+IVGVVT GLFAR+GA++ LLGTADGV L F Sbjct: 181 EDPATLEAQINDIVGVVTVGLFARRGADIALLGTADGVNSLSF 223 >ref|YP_004751954.1| ribose 5-phosphate isomerase A [Collimonas fungivorans Ter331] gb|AEK61131.1| Ribose 5-phosphate isomerase A [Collimonas fungivorans Ter331] Length = 244 Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/223 (80%), Positives = 200/223 (89%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 MTQDELKQAVA+ AI+YVVDG+I+GVGTGSTANFFIDEL KIKHRIKGAVASSEATA RL Sbjct: 22 MTQDELKQAVAREAIKYVVDGQIVGVGTGSTANFFIDELAKIKHRIKGAVASSEATAARL 81 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 R+H I V+DLN+V TMPVYIDGADEI GAMIKGGGAALTREKIVASVA+KF+CIADGS Sbjct: 82 RAHDIEVYDLNQVATMPVYIDGADEITEQGAMIKGGGAALTREKIVASVAEKFICIADGS 141 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV+VLGKFPLPVEVIPM+ AVVARKL LGGEPRLR KDGKP++TDNGC IID++ L I Sbjct: 142 KLVKVLGKFPLPVEVIPMAQAVVARKLIKLGGEPRLRFKDGKPLITDNGCVIIDMVDLKI 201 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 TDP ++E +IN I GVVT GLFA+QGA+VCLLGT DGVK L+F Sbjct: 202 TDPVELERQINQITGVVTVGLFAQQGADVCLLGTPDGVKTLKF 244 >ref|ZP_08275983.1| Ribose 5-phosphate isomerase A [Oxalobacteraceae bacterium IMCC9480] gb|EGF30545.1| Ribose 5-phosphate isomerase A [Oxalobacteraceae bacterium IMCC9480] Length = 223 Score = 343 bits (881), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 175/223 (78%), Positives = 191/223 (85%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 MTQDELKQAVA+AA++YVVDG+IIGVGTGSTANFFID L IKHRIKGAVASSE TAERL Sbjct: 1 MTQDELKQAVARAALDYVVDGDIIGVGTGSTANFFIDALAGIKHRIKGAVASSEGTAERL 60 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 +HGI V DLN+V +M VYIDGADEI GAMIKGGGAALTREKIVASVA KF+CIADGS Sbjct: 61 MAHGINVVDLNDVTSMAVYIDGADEITSAGAMIKGGGAALTREKIVASVATKFICIADGS 120 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV+VLG FPLPVEVIPM+ AVV RKLA LGG PRLRVKDG+ V+TDNG IIDVLGL I Sbjct: 121 KLVDVLGAFPLPVEVIPMAQAVVMRKLAGLGGTPRLRVKDGQTVLTDNGNIIIDVLGLQI 180 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 TDP +E IN IVGVVT GLFA +GA+V LLGTADGV+ L F Sbjct: 181 TDPVAMELAINAIVGVVTVGLFAARGADVALLGTADGVRTLVF 223 >ref|ZP_04579253.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes OXCC13] gb|EEO30226.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes OXCC13] Length = 225 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 160/224 (71%), Positives = 193/224 (86%), Gaps = 1/224 (0%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 M+QD+LK +VA+AAI+Y+ +G+IIGVGTGSTANFFIDEL +IK+RI GAVASS ATA+RL Sbjct: 1 MSQDDLKLSVARAAIQYIPEGKIIGVGTGSTANFFIDELARIKNRIVGAVASSRATADRL 60 Query: 61 RSHGITVFDLNEV-ETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADG 119 SHGI VFDLN++ E +PVYIDGADEI GAMIKGGG ALTREKI+AS ++KF+CIAD Sbjct: 61 ASHGIKVFDLNDITEPLPVYIDGADEITAKGAMIKGGGGALTREKIIASASEKFICIADE 120 Query: 120 SKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLS 179 SKLV++LGKFPLPVEVIPM+ ++ARKLA GG+P LR+K+GKP VTDNG I+DV GL Sbjct: 121 SKLVDILGKFPLPVEVIPMASQLIARKLAVFGGKPVLRMKEGKPFVTDNGNVILDVSGLQ 180 Query: 180 ITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 I DPA++E+KINNIVGVVT GLFAR GAN+CL+G +DGVK L F Sbjct: 181 IKDPANLEEKINNIVGVVTVGLFARTGANLCLMGCSDGVKTLAF 224 >ref|ZP_04577117.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes HOxBLS] gb|EEO28079.1| ribose-5-phosphate isomerase A [Oxalobacter formigenes HOxBLS] Length = 225 Score = 311 bits (796), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 156/223 (69%), Positives = 183/223 (82%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 M QD+LK +VA+AA++YV +G+IIGVGTGSTANFFIDEL KIK RI GAVASS+ATAERL Sbjct: 1 MAQDDLKLSVARAAVKYVPEGKIIGVGTGSTANFFIDELAKIKDRITGAVASSKATAERL 60 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 +HGI VF+L EVE +PVYIDGADEI GAMIKGGG ALTREKI+AS A +F+CIAD S Sbjct: 61 AAHGIRVFNLTEVEEIPVYIDGADEITRSGAMIKGGGGALTREKIIASAAARFICIADES 120 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV LGKFPLPVEVIPM++ +VA KL ALGG LR++DGKP VTDNG I+DV GL I Sbjct: 121 KLVATLGKFPLPVEVIPMAYKLVAGKLDALGGRAELRIRDGKPFVTDNGNLILDVFGLQI 180 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 P +E+KINN GVVT GLFA++GA++CLLG+ DGV LEF Sbjct: 181 GHPLRLEEKINNFTGVVTVGLFAQRGADLCLLGSPDGVGTLEF 223 >gb|EGW60169.1| ribose 5-phosphate isomerase [Dechlorosoma suillum PS] Length = 223 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 152/226 (67%), Positives = 178/226 (78%), Gaps = 8/226 (3%) Query: 1 MTQDELKQAVAKAAIEYVV----DGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEAT 56 MTQDELKQAVA+AA +YV + IIGVGTGSTAN FID L +K R +GAVASSEAT Sbjct: 1 MTQDELKQAVARAAADYVASRVAEDAIIGVGTGSTANCFIDALAAMKGRFRGAVASSEAT 60 Query: 57 AERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCI 116 A RL+ HGI V DLN+V TMPVY+DGADE+ MIKGGG ALTREKIVA+VA+ F+CI Sbjct: 61 AARLKGHGIPVLDLNDVSTMPVYVDGADEVTPKLHMIKGGGGALTREKIVAAVAETFICI 120 Query: 117 ADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVL 176 ADGSKLV+ LGKFPLPVEVIPM+ A VAR+LA LGG P+LR + +TDNG I+DV Sbjct: 121 ADGSKLVQALGKFPLPVEVIPMARAQVARELAKLGGTPKLR----EGFLTDNGNIILDVH 176 Query: 177 GLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLE 222 GLSI DP D+E +IN IVGVVTNGLFAR+GA++ L+GT +GVK L Sbjct: 177 GLSIADPVDLESRINQIVGVVTNGLFARRGADILLMGTPEGVKTLS 222 >ref|YP_004126844.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans BC] ref|YP_004388289.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans K601] gb|ADU99956.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans BC] gb|AEB84773.1| ribose 5-phosphate isomerase [Alicycliphilus denitrificans K601] Length = 229 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 142/223 (63%), Positives = 179/223 (80%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 ++QDELK V +AA++YVV GEI+GVGTGST N FID L +K RI GAV+SSEA+ RL Sbjct: 7 LSQDELKTLVGRAALDYVVPGEIVGVGTGSTVNKFIDALATVKERIGGAVSSSEASTARL 66 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 ++ GI V D NEV ++ VYIDGADEI+G G M+KGGGAALTREKIVA++AQ+FVCIAD S Sbjct: 67 KALGIPVLDANEVASLSVYIDGADEIDGRGYMVKGGGAALTREKIVAALAQRFVCIADES 126 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 KLV VLG FPLPVEVIPM+ + +AR+ +LGG+ LR++DG+P+VTDNG +I+DV GL+I Sbjct: 127 KLVSVLGAFPLPVEVIPMAASQIARRFESLGGQATLRLRDGRPLVTDNGQHILDVRGLAI 186 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 223 DP E ++N GVVT G+FARQ A+VCLLGTA GV+ L+F Sbjct: 187 GDPLAFESEVNQWPGVVTVGVFARQKAHVCLLGTAQGVRTLKF 229 >ref|YP_003047724.1| ribose-5-phosphate isomerase A [Methylotenera mobilis JLW8] gb|ACT47197.1| ribose 5-phosphate isomerase [Methylotenera mobilis JLW8] Length = 219 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 149/222 (67%), Positives = 175/222 (78%), Gaps = 6/222 (2%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVASSEATAERL 60 TQDELKQ VAKAA+EYV G IIGVGTGSTANFFI+EL K+KH+I GAVASSEATA+RL Sbjct: 3 FTQDELKQQVAKAAVEYVKSG-IIGVGTGSTANFFIEELAKVKHKIDGAVASSEATAQRL 61 Query: 61 RSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQKFVCIADGS 120 R HGI VFDLN V+ + +Y+DGADEI M+KGGG ALTREKIVA+VA+KF+CI D + Sbjct: 62 RGHGIEVFDLNSVDNLEIYVDGADEITEHMHMLKGGGGALTREKIVAAVAKKFICICDAT 121 Query: 121 KLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCYIIDVLGLSI 180 K V VLGKFPLPVEV+PM+ + VAR+L LGG+P+LR TDNG I+DV GL+I Sbjct: 122 KYVPVLGKFPLPVEVLPMAKSHVARELVKLGGQPQLR-----DFTTDNGNLILDVHGLTI 176 Query: 181 TDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLE 222 TDP +E KIN IVGVVTNGLFA + ANV LL TA+GVK + Sbjct: 177 TDPVAMEAKINQIVGVVTNGLFAARPANVLLLATAEGVKTYQ 218