BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0019.p (581 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776822.1| methyl-accepting chemotaxis protein [Herbasp... 1067 0.0 ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthin... 481 e-133 ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthin... 481 e-133 ref|ZP_08404364.1| methyl-accepting chemotaxis transducer transm... 459 e-127 ref|YP_003774785.1| methyl-accepting chemotaxis protein [Herbasp... 459 e-127 ref|YP_001101318.1| methyl-accepting chemotaxis protein [Hermini... 457 e-126 ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer ... 454 e-125 ref|ZP_08407032.1| methyl-accepting chemotaxis sensory transduce... 453 e-125 ref|NP_522922.1| methyl-accepting chemotaxis transducer transmem... 452 e-125 ref|YP_003777912.1| methyl-accepting chemotaxis transducer trans... 449 e-124 >ref|YP_003776822.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ64914.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 583 Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/583 (97%), Positives = 572/583 (98%), Gaps = 2/583 (0%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG Sbjct: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE Sbjct: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 TRKSY+ALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ Sbjct: 121 TRKSYAALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH Sbjct: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE Sbjct: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI Sbjct: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT Sbjct: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA Sbjct: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 Query: 541 PRATKSLPAK--PAAPAVTNAPAAAPALPASKREDKSEEWETF 581 PRATKSLPAK A A AAPALPASKREDKSEEWETF Sbjct: 541 PRATKSLPAKPAAPAVTNAPAAPAAPALPASKREDKSEEWETF 583 >ref|YP_001355274.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89882.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 571 Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust. Identities = 289/581 (49%), Positives = 384/581 (66%), Gaps = 12/581 (2%) Query: 3 FNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISGKV 62 NL I RL+++F +++++ + L R+ +N A+ V DRY K + N + + Sbjct: 1 MKNLKIGQRLSLSFGSMVILLVVLATLAFTRIGGLNDAISEVDGDRYPKTVLANVMKDDL 60 Query: 63 DDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTETR 122 + +A ++RN LLMT+ A I AE I + EL + V + + + + R Sbjct: 61 NQIARNMRNALLMTEKAAIQAELTQIGKATDSLNNALVELEKTVRSERGRQTIAGLQADR 120 Query: 123 KSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQAE 182 + L+ KL S+G KD A+ L+ +E+ P Q Y + +D+L D Q +LM +S +A Sbjct: 121 SKFLPLKDDFIKLASAGIKDEAVALLFAEVRPAQLSYLASIDKLIDYQNELMKKSGAEAN 180 Query: 183 AAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAHSN 242 A T++++ I ++A AA A +RSITRPLS+AV +A VA GDLT I S Sbjct: 181 AKASQTQLLIGIFSIIAVLIAAVFAVLATRSITRPLSQAVVLARKVADGDLTGSIVVESK 240 Query: 243 DETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEETA 302 DETG+LLQAL MN+ L IV +VR GTD++ +AS QIATGNLDLSSRTE+QAS+LEETA Sbjct: 241 DETGQLLQALKDMNEGLLKIVTQVRLGTDTIASASHQIATGNLDLSSRTEQQASSLEETA 300 Query: 303 SSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDIIS 362 SS+EELTS+VKQNA++ R+S++LA +AS+VA +GG V +VV TMG INDS+ KIVDII Sbjct: 301 SSMEELTSTVKQNAENARQSNQLALSASEVAVRGGAVVSKVVDTMGEINDSAKKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDSVN 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIKELI DSV+ Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIGDSVD 420 Query: 423 QVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTTQQ 482 +V+ G+ LV AG+TM VV S+++V+ I+ EI+AA++EQ+DGIEQ+NQA+MQMD TQQ Sbjct: 421 KVSIGSRLVDDAGATMREVVESVKRVTDIMSEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGS--GPAPSAVAPVAPVLRKVSAAA 540 NAALVEEAAAAA++LQ QA L +VGVF+LD G + P+ AP P + AA Sbjct: 481 NAALVEEAAAAAESLQGQASHLSQVVGVFKLDGHGTTVVNAVPTYTAPEQP--KVAGKAA 538 Query: 541 PRATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 K+ K P +PA +EWE F Sbjct: 539 LHKVKTTQQKIEDKEFARVP--RNVVPA------GDEWEQF 571 >ref|YP_001355234.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89943.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 295/579 (50%), Positives = 386/579 (66%), Gaps = 13/579 (2%) Query: 3 FNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISGKV 62 NL I RLA++F ++ V+ + + RL ++ A+ +V NDRY K + I + Sbjct: 1 MKNLKIGQRLALSFGSVVAVLIVLAVIAFTRLDKLDAAIGMVSNDRYPKTVNAHIIKDTL 60 Query: 63 DDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTETR 122 ++ A ++RN LLMTD AQI E TIE S + D+L R + + + + + +T+ R Sbjct: 61 NETARNMRNALLMTDAAQIKGELDTIEKGSVTIAEALDKLDRTIKSEKGRTYIKALTDAR 120 Query: 123 KSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQAE 182 ++ ++ + L + G + A L+ +E+ P Q Y LD L + Q LM ++ + A Sbjct: 121 GRFTPVKDKFVALVAQGMRAEAQILLFAEVRPAQLEYMLGLDRLVEFQSNLMHKAGEDAH 180 Query: 183 AAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAHSN 242 + ++ I V+A +AF+ + +RSITRPLS+AV +A VA GDLT I S Sbjct: 181 EVSANAQQLVGILSVIAVIISAFLGFLATRSITRPLSQAVGLARKVADGDLTGTIVVTSK 240 Query: 243 DETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEETA 302 DETG+LLQAL MN L IV +VR GTD++ TAS+QIATGNLDLSSRTEEQAS+LEETA Sbjct: 241 DETGQLLQALQDMNNGLVRIVTQVRMGTDTIATASSQIATGNLDLSSRTEEQASSLEETA 300 Query: 303 SSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDIIS 362 SS+EELTS+VKQNAD+ R+S++LA AS+VA +GG V QVV+TMG+INDS++KIVDII Sbjct: 301 SSMEELTSTVKQNADNARQSNQLALTASEVAVRGGAVVSQVVETMGSINDSANKIVDIIG 360 Query: 363 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDSVN 422 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIK LI+DSV Sbjct: 361 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKTLIDDSVE 420 Query: 423 QVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTTQQ 482 +V +G+ LV AG+TM VV S+ +V+ I+GEI+AA++EQ+DGIEQ+NQA+MQMD TQQ Sbjct: 421 KVNNGSRLVHDAGTTMAEVVESVRRVTDIMGEITAASQEQTDGIEQINQAVMQMDQVTQQ 480 Query: 483 NAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAAPR 542 NAALVEEAAAAA++LQDQA L +V VF+LD + A S VA AP R VS Sbjct: 481 NAALVEEAAAAAESLQDQANNLSQVVSVFKLDANAVALQATSRVA--APASRPVSK---- 534 Query: 543 ATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 PA+ A N AS +EWE F Sbjct: 535 -----PAQQIRSA--NVDKQIVRQRASATAGDGDEWEQF 566 >ref|ZP_08404364.1| methyl-accepting chemotaxis transducer transmembrane protein [Hylemonella gracilis ATCC 19624] gb|EGI78561.1| methyl-accepting chemotaxis transducer transmembrane protein [Hylemonella gracilis ATCC 19624] Length = 541 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 266/541 (49%), Positives = 371/541 (68%), Gaps = 11/541 (2%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ N+L I TRLA+AF+++I+++ +A GL+ L+ +++ +D +V DRY +IA+ N I Sbjct: 1 MKMNSLKIGTRLALAFALVIVLLLASLAAGLSVLSRVDRTMDQLVQDRYAQIALSNAIKD 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 D I++ LL P Q +L NT+ + + +L+ E+KA + +E Sbjct: 61 VGDKGIITIGRILLANTPEQTKKYMDDYAALRTINTENFAKFEKLLHTDESKAIFAEQSE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 RK+Y A + L ++G ++ ++ + +M LQ Y++ +D++ Q+K M V + Sbjct: 121 ARKAYGAAVRNFFDLLAAGKREESMAVYQGDMASLQPRYYALIDKMVAHQEKGMIADVAE 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 A+ A ++ R+ M+ V+A A I+RSITRP+ RA+ +AE+VA G+LT I+ Sbjct: 181 AKRAADSARIGMLAFSVIAVLLGIVTAVMITRSITRPIDRAILMAESVALGNLTYKISDE 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DE GRL+ AL M L IVLEVR G D++V+AS Q+A GNLDLSSRTE+QASALEE Sbjct: 241 SQDEVGRLMGALKHMVDNLHRIVLEVRNGADNIVSASHQVAQGNLDLSSRTEQQASALEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TA+++E+LTSSVK +A++ +++ LA AS VA QGG V QVV TM +I DSS +IV+I Sbjct: 301 TAAAMEQLTSSVKLSANNANQANSLALQASSVAVQGGEVVGQVVATMSSIADSSKRIVEI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGE GRGFAVVA+EVR LAQRSA AAKEIK LI++S Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEHGRGFAVVAAEVRSLAQRSAVAAKEIKSLIDNS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V+QV G+++V QAG+TM VVNSI+QVSHIV EISA++REQS GIEQ+N+AI+QMD +T Sbjct: 421 VHQVDRGSQMVDQAGATMQQVVNSIKQVSHIVAEISASSREQSQGIEQLNEAIVQMDEST 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 Q+NAA+VE++ A+A A+QDQA +L ++V F L+ P A R + AAA Sbjct: 481 QKNAAMVEQSTASAHAMQDQANQLNEVVRAFVLNG-----------KPQAHAGRHMLAAA 529 Query: 541 P 541 P Sbjct: 530 P 530 >ref|YP_003774785.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ62877.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 576 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 290/568 (51%), Positives = 382/568 (67%), Gaps = 15/568 (2%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ +++ I+ RL F+ LI+V+ I +G+ L ++ A D +VNDRY K+A+ I+ Sbjct: 2 MKISDMKISVRLGACFAALIVVMCVIAGVGVKNLLMVSDATDEIVNDRYVKVALGTQITD 61 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 KV+ A SLRN ++ +P + +++ +++ ++ E+ + P L + + Sbjct: 62 KVNTGARSLRNAIMARNPEEQKKYLDRMDTYTSQVSEHLAEMEKRTNTPRGSELLAALKQ 121 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R YS R ++ L +D A + + +P+Q YF+ + E+ Q LMD+S ++ Sbjct: 122 ARADYSKERIKVVDLIHQQKRDEATAHLFDKTIPVQDKYFAAVKEMVSFQSSLMDKSAER 181 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 A AA + IM++ +A +A A I+RSITRPL+ AV+VA VAAGDLT I A Sbjct: 182 ASAASSSAINIMLVLSGVAVLLSALCAMLITRSITRPLNEAVQVATAVAAGDLTVQIEAT 241 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DETG LL AL +MN L IV EVR GTD++ TAS +IATGNLDLSSRTE+QA ALEE Sbjct: 242 SKDETGALLGALKSMNDNLHRIVAEVRAGTDTINTASREIATGNLDLSSRTEQQAGALEE 301 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TAS++EELTS+V+QNAD+ R+++ LA ASQVA QGG V +VVQTMG IND+S KIVDI Sbjct: 302 TASAMEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDI 361 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI+ S Sbjct: 362 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDAS 421 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V +V SG+ LV QAG+TM+ VV S+++V+ +V EI+AA+ EQSDGIEQ+NQAI+QMD T Sbjct: 422 VERVESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVT 481 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAAA 540 QQNAALVE+AAAAAQ+LQ+Q+ RL D VG+FRL P+P + APV R V A Sbjct: 482 QQNAALVEQAAAAAQSLQEQSGRLSDTVGIFRLGNDHAHQPSPLS----APVQRSVQVA- 536 Query: 541 PRATKSLPAKPAAPAVTNAPAAAPALPA 568 PA P + P + PA Sbjct: 537 ----------PARPVLARKPVTRTSAPA 554 >ref|YP_001101318.1| methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] emb|CAL63197.1| Methyl-accepting chemotaxis protein [Herminiimonas arsenicoxydans] Length = 561 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 282/582 (48%), Positives = 384/582 (65%), Gaps = 22/582 (3%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+F NL I RL +AF +L++++A + +G+ RL D+ KA L+ K+ I G Sbjct: 1 MQFKNLKIGVRLGMAFGLLLVLMAFMTVMGVLRLQDVAKATVLMEEATIKERLAQQWIKG 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 ++ + ++ +DP Q Q+ + ++SA +K DEL LV + E K L V E Sbjct: 61 -IETNTVRTFARVRTSDPEQDKILQQEMSAISAAVSKQQDELETLVVSAEGKKLLATVAE 119 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIK-LMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVD 179 R +Y+A+R + L+ + + A ++ + ++M P Y ++ + + Q + + Sbjct: 120 KRATYTAIRDDVMNLREA--RGAELQNAIANKMKPAADAYIQSVEAVVNAQINNFEDAKG 177 Query: 180 QAEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAA 239 + + Y++ RM++++ G++A T +AW ++RSIT+PL AV VA VA+GDLT I Sbjct: 178 RVDTIYQSARMLLIVLGLVALTLGIVLAWMLTRSITKPLDYAVSVARLVASGDLTGRITV 237 Query: 240 HSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALE 299 S DETG+LLQAL MN L A + +VR G D++ TAS QIA+GNLDLSSRTEEQAS+LE Sbjct: 238 DSKDETGQLLQALKDMNDSLTASITQVRSGVDTIATASNQIASGNLDLSSRTEEQASSLE 297 Query: 300 ETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVD 359 ETASS+EELTS+VKQNAD+ R++++LA AS VA +GG V +VV TM IN S+ KIVD Sbjct: 298 ETASSMEELTSTVKQNADNARQANQLAVTASGVAEKGGTVVSKVVDTMDGINTSARKIVD 357 Query: 360 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIND 419 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI+D Sbjct: 358 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAKEIKTLIDD 417 Query: 420 SVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNT 479 SV++V +G++LVA+AG+TM VV+S+++V+ I+ EI AA++EQS GIEQVNQAI QMD Sbjct: 418 SVDKVDTGSKLVAEAGTTMVEVVDSVKRVTDIMAEIMAASQEQSAGIEQVNQAIGQMDQV 477 Query: 480 TQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAA 539 TQQNAALVEEAAAAA++L +QA L V +F+LD V S S VA PV ++ Sbjct: 478 TQQNAALVEEAAAAAESLNEQAANLAQAVSIFKLDGVANS----SRVATRLPV---AASN 530 Query: 540 APRATKSLPAKPAAPAVTNAPAAAPALPASKREDKSEEWETF 581 AP AT+ A PA + N R ++WE F Sbjct: 531 AP-ATRQFAASPAPKKIAN----------ETRPVSGDDWEEF 561 >ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] gb|ABE50421.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] Length = 569 Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust. Identities = 278/585 (47%), Positives = 376/585 (64%), Gaps = 20/585 (3%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+F++L I RL F++++L++ +VA GLA+LA++ VV KK I Sbjct: 1 MKFSDLRIGVRLGAGFAVILLLMMIMVAFGLAQLANVGSTAKQVVETELKKERITTEWVS 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 + + +D A + I + N L +L L+ PE KAK E Sbjct: 61 NATQNGLRTLAAIKSSDAAMYDMYIQQIAETARANDSLKQQLETLLVKPEGKAKFADAKE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSE-MVPLQKIYFSQLDELSDTQQKLMDQSVD 179 ++S +R ++ +L+ G + + I+ + E +P +K YF ++EL + ++ L+D++ Sbjct: 121 KADAFSKVRSELLQLRKDGAEASLIEKNVQEVFLPARKAYFDSMNELLEFERHLIDEAGA 180 Query: 180 QAEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAA 239 + + M++ G++A A AW +S ITRPL+ AV++AETVAAGDLT+ +A Sbjct: 181 DIQRVKNAASLWMLVIGLVAVVLGAIFAWRLSLGITRPLANAVKLAETVAAGDLTSTLAI 240 Query: 240 HSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALE 299 S DE G+LL AL +MN L IV EVR GT+++ TAS+QIA+GNLDLSSRTEEQAS+LE Sbjct: 241 DSKDEIGQLLNALKSMNDNLARIVSEVRSGTETIATASSQIASGNLDLSSRTEEQASSLE 300 Query: 300 ETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVD 359 ETAS++EELTS+VKQNAD+ +++++LA +AS +A QGG V QV+ TM +I++SS +I D Sbjct: 301 ETASAMEELTSTVKQNADNAQQANQLAVSASGIATQGGEVVDQVIATMQSISESSKRIAD 360 Query: 360 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIND 419 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA AAKEIK LI D Sbjct: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSANAAKEIKGLITD 420 Query: 420 SVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNT 479 SV V +G+ LV QAG+TM VV+S+++V+ IV EISAA+ EQS GIEQVNQAI+QMD Sbjct: 421 SVESVDAGSRLVEQAGTTMKHVVDSVQRVTDIVSEISAASHEQSTGIEQVNQAIVQMDEV 480 Query: 480 TQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLDEVGGSGPAPSAVAPVAPVLRKVSAA 539 TQQNAALVEEAAAA+Q+LQDQA L V VF+++ + V + KVS Sbjct: 481 TQQNAALVEEAAAASQSLQDQAASLAQAVSVFKVNGM-----------QVQAAVHKVSKP 529 Query: 540 APRATKSLPAKPAAPAVTNA---PAAAPALPASKREDKSEEWETF 581 P A A+ VT A PA+ S ++EWE F Sbjct: 530 KPVAVSKPKVVVASKPVTTTRTRTAMVPAVAGS-----ADEWEEF 569 >ref|ZP_08407032.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] gb|EGI75850.1| methyl-accepting chemotaxis sensory transducer [Hylemonella gracilis ATCC 19624] Length = 607 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 296/607 (48%), Positives = 392/607 (64%), Gaps = 31/607 (5%) Query: 3 FNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISGKV 62 FN+L I TRLA+ +IL L++ G+ + R ADI K L+ +VN R I +N + +V Sbjct: 4 FNHLKIGTRLALTLTILTLLLIGVGLQSIVRSADIQKGLEDIVNRRMVIIEEVNELRLEV 63 Query: 63 DDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTETR 122 + A S+RN + T+P QI AE + + T+L + V +P+ + L + R Sbjct: 64 NQQARSIRNLAIFTNPDQIKAELAELAESRRQVTELVARVDANVQSPKGRELLKLAADER 123 Query: 123 KSYSALRKQIDK---LQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVD 179 + R +D+ L G +DAAI +LS++ P+Q Y LD+ + Q+ L + + Sbjct: 124 VKF---RDGVDRYVALLQDGQRDAAIAYLLSDVRPVQLAYLKTLDQQIEFQKSLSHDAGE 180 Query: 180 QAEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAA 239 A + ET R+ + +A V+A A + I RSITRP+ AV +A+ VAAGDL+ + + Sbjct: 181 TAISEVETLRVSVAVAIVIALVVAFSLGVWIVRSITRPIEEAVNLAQAVAAGDLSREVKS 240 Query: 240 HSNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALE 299 DETG+LLQAL AM Q L +V VR+G++S+ TAS QIA GN DLS+RTE QAS+LE Sbjct: 241 TRRDETGQLLQALGAMQQSLSKVVGIVRQGSESVATASAQIAQGNQDLSARTESQASSLE 300 Query: 300 ETASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVD 359 ETA+S+EEL S+V QNAD++R++++LA AS VA QGG V QVV+TM I++SS KI D Sbjct: 301 ETAASMEELGSTVTQNADNSRQANQLAQKASSVAVQGGEVVTQVVETMKGISESSKKISD 360 Query: 360 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELIND 419 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LA RSA AAKEIK LI+D Sbjct: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAGRSAEAAKEIKALISD 420 Query: 420 SVNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNT 479 SV +V +G LV QAGSTM VV+SI +V+ ++G+ISAA+ EQS G+ Q+ +A+ QMD Sbjct: 421 SVTRVDAGAALVDQAGSTMQEVVHSIRRVTDLMGDISAASTEQSQGVAQIGEAVQQMDQV 480 Query: 480 TQQNAALVEEAAAAAQALQDQAQRLLDLVGVFRL---DEVGGS--GPAP---SAVAPVAP 531 TQQNAALVEE +AAA +L+ QA+ L+D V VF+L E+ S GP P A++ P Sbjct: 481 TQQNAALVEEMSAAANSLKTQARELVDAVAVFKLAHGAELRASALGPMPVHAQALSTPRP 540 Query: 532 VLRKVSAAAP-RA--TKSLPAKPAA--------PAVTNAPAAAPALPASKREDK------ 574 V SA P RA T+++ A PAA PAV AP PALPA + Sbjct: 541 VQHTSSAREPARATGTRAVGATPAASHPSVSVKPAVAAAPKTPPALPAESAKSPATAAGA 600 Query: 575 SEEWETF 581 SEEWETF Sbjct: 601 SEEWETF 607 >ref|NP_522922.1| methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18514.1| probable methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum GMI1000] Length = 543 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 258/535 (48%), Positives = 353/535 (65%), Gaps = 5/535 (0%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 MR +++ I RL AF++++ ++ GI A+G+ RL D N + +V++RY IA+ N I Sbjct: 1 MRISDMRIGVRLGAAFALVVALLIGIAAVGIQRLDDNNTKMGQIVSERYSLIALSNQIKN 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 L N LL+T P Q ++ N + Y L +L+ + KA + + Sbjct: 61 NGYKANGILSNLLLVTTPEQKTKYMSDYAAIRQANAQAYGRLEKLLTTDQGKALFKEQFD 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R +Y A ++ L + + A L +M LQ Y+ +D++ D Q M+ V + Sbjct: 121 ARSAYGASVRKFFALVDADNVQEARALYQGDMSRLQDRYYVLVDKMVDHQAGEMEHDVSE 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 A A ++ M++ VLA A I+R+ITRP++ A+ +AE VA G+LT ++ Sbjct: 181 AAAQGANAKIQMIVLAVLATLLAIATGAFITRTITRPINHAMHLAEAVAQGNLTHLLEVD 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 + DE GRLL AL M + L IV +VR GTD++ AS+++A+GN+DLSSRTE+QAS+LEE Sbjct: 241 TQDEIGRLLAALKHMIENLHGIVSQVRGGTDTITRASSEVASGNIDLSSRTEQQASSLEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TA+++E+LTS+VKQNAD+ +++S LA+NAS VA +GG AV + +QTM IN SS KIVDI Sbjct: 301 TAAAMEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 I VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR LAQRSA AAKEIK LI DS Sbjct: 361 IGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V V++GT V +AG + VV I+ V++IV EISA++REQSDGIEQ+N+AI QMD T Sbjct: 421 VGHVSTGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKAT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRLD-EVGGSGPA----PSAVAPVA 530 Q+NA+LVEE+A AAQALQDQA +L D+V F+L ++ G G A +VA VA Sbjct: 481 QENASLVEESATAAQALQDQANQLADMVSTFKLHADLSGRGRAAQGEAGSVAHVA 535 >ref|YP_003777912.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ66004.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 597 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 276/513 (53%), Positives = 364/513 (70%) Query: 1 MRFNNLSIATRLAIAFSILILVIAGIVALGLARLADINKALDLVVNDRYKKIAIINTISG 60 M+ ++ I+ RLA+ F++LI V+ I +G+ L+ I+K+ L+V DRY+KIA+ I Sbjct: 1 MKLKDIKISVRLAVCFAVLIGVMCLITGVGMKSLSSISKSSALIVEDRYEKIALAVEIRD 60 Query: 61 KVDDVAISLRNQLLMTDPAQIAAEQKTIESLSAENTKLYDELTRLVANPEAKAKLDKVTE 120 V+ A +LRN LL + + + SA+ T+ ++ ++++ + + E Sbjct: 61 NVNGAARNLRNALLGRNLEEATRYLDRSAANSAKTTEALGKMEKILSTARGRELFQSIQE 120 Query: 121 TRKSYSALRKQIDKLQSSGDKDAAIKLMLSEMVPLQKIYFSQLDELSDTQQKLMDQSVDQ 180 R +Y+ R ++ +L K+ A++L+ ++++P Q YF LD+ Q+ LM+QSV + Sbjct: 121 ARSAYNTPRDKLRELIKQQKKEEAVELLFTQVIPAQDKYFQVLDQFVAFQKSLMEQSVTE 180 Query: 181 AEAAYETTRMIMVIAGVLAATFAAFIAWTISRSITRPLSRAVEVAETVAAGDLTAVIAAH 240 ++ +M+ +A AW ++RSITRPL+ AV VA VAAGDLT I A Sbjct: 181 GRDTTQSAIAMMLGLSAVAIALCVIAAWLVTRSITRPLNEAVSVASAVAAGDLTVQIGAT 240 Query: 241 SNDETGRLLQALAAMNQKLKAIVLEVRRGTDSMVTASTQIATGNLDLSSRTEEQASALEE 300 S DETG LL AL +MN L IV EVR+G+D++ TAS +IATGNLDLSSRTEEQA ALEE Sbjct: 241 SKDETGALLAALKSMNDSLHRIVSEVRQGSDTINTASAEIATGNLDLSSRTEEQAGALEE 300 Query: 301 TASSLEELTSSVKQNADHTRKSSELAANASQVANQGGLAVKQVVQTMGAINDSSHKIVDI 360 TAS++EELTS+VKQNAD+ R+++ LAA AS+VA QGG V QVVQTMG IND+S KIVDI Sbjct: 301 TASAMEELTSTVKQNADNARQANSLAATASEVAVQGGSVVGQVVQTMGEINDASRKIVDI 360 Query: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRGLAQRSATAAKEIKELINDS 420 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR LAQRSA+AAKEIK LI+DS Sbjct: 361 ISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKALIDDS 420 Query: 421 VNQVTSGTELVAQAGSTMDAVVNSIEQVSHIVGEISAATREQSDGIEQVNQAIMQMDNTT 480 V++V +G+ LV QAG+TM VV S+ +V+ +V EISAA+ EQSDGIEQ+N AI QMD T Sbjct: 421 VSRVDNGSRLVEQAGTTMTEVVASVRRVTDVVAEISAASNEQSDGIEQINHAITQMDQVT 480 Query: 481 QQNAALVEEAAAAAQALQDQAQRLLDLVGVFRL 513 QQNAALVEEAAAAAQ+LQ+Q+ RL V VF+L Sbjct: 481 QQNAALVEEAAAAAQSLQEQSTRLSATVSVFKL 513