BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0008.p (360 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776810.1| ABC transporter permease [Herbaspirillum ser... 711 0.0 emb|CAL62456.2| ABC transporter, permease component, putative ni... 586 e-165 ref|YP_001352895.1| ABC-type uncharacterized transport system, p... 585 e-165 ref|YP_001100578.1| oligopeptide ABC transporter membrane protei... 561 e-158 ref|YP_001156015.1| binding-protein-dependent transport systems ... 523 e-146 ref|YP_982246.1| binding-protein-dependent transport systems inn... 518 e-145 ref|YP_002944630.1| binding-protein-dependent transport systems ... 516 e-144 ref|YP_549238.1| binding-protein-dependent transport systems inn... 514 e-144 ref|YP_296336.1| binding-protein dependent transport system inne... 499 e-139 gb|AEG69492.1| dipeptide transporter, membrane component of ABC ... 498 e-139 >ref|YP_003776810.1| ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64902.1| ABC-type uncharacterized transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 356 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/356 (100%), Positives = 356/356 (100%) Query: 5 MNIWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAAS 64 MNIWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAAS Sbjct: 1 MNIWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAAS 60 Query: 65 GASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVK 124 GASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVK Sbjct: 61 GASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVK 120 Query: 125 SKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLL 184 SKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLL Sbjct: 121 SKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLL 180 Query: 185 VLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNT 244 VLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNT Sbjct: 181 VLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNT 240 Query: 245 FLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFS 304 FLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFS Sbjct: 241 FLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFS 300 Query: 305 LDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 LDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK Sbjct: 301 LDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 356 >emb|CAL62456.2| ABC transporter, permease component, putative nickel-transporting ATPase [Herminiimonas arsenicoxydans] Length = 352 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 289/356 (81%), Positives = 319/356 (89%), Gaps = 4/356 (1%) Query: 5 MNIWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAAS 64 MNIWSYI+KR LLM+PTL GVVAITFAVIQFVPGGPVEQA++E+KG+ +G Sbjct: 1 MNIWSYIIKRALLMLPTLLGVVAITFAVIQFVPGGPVEQALMELKGQ----VGAGEATGG 56 Query: 65 GASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVK 124 GAS YRGRQGID +R+AEIK LYGFDKP ERFW MLKGF TFDLGKSFYHH DVW LV Sbjct: 57 GASQYRGRQGIDAERVAEIKALYGFDKPASERFWQMLKGFATFDLGKSFYHHKDVWDLVV 116 Query: 125 SKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLL 184 SKLPVSI++GLWTF L+Y ISVPLGIAKAVREG+RFD T+ +VLVGYSIPGF+LGVFLL Sbjct: 117 SKLPVSITLGLWTFFLTYFISVPLGIAKAVREGSRFDAITSMMVLVGYSIPGFILGVFLL 176 Query: 185 VLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNT 244 V+F GGSFVQWFPLRGLTSD+WE LSL+GK+ DYLWHITLPVTASV GSFAV+TMLT+NT Sbjct: 177 VMFGGGSFVQWFPLRGLTSDDWEQLSLLGKVLDYLWHITLPVTASVAGSFAVMTMLTKNT 236 Query: 245 FLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFS 304 FL+EIRKQYVLTARAKGLSE VLYKHVFRNALIPLVTGFP+AFI +FFAGSLLIETLFS Sbjct: 237 FLDEIRKQYVLTARAKGLSENAVLYKHVFRNALIPLVTGFPAAFIGAFFAGSLLIETLFS 296 Query: 305 LDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 LDG+GLL+YES IRRDYPVVMGTLYLFTLIGLVVKL+GDLCYVWADPR+QFESL + Sbjct: 297 LDGLGLLSYESVIRRDYPVVMGTLYLFTLIGLVVKLLGDLCYVWADPRLQFESLNR 352 >ref|YP_001352895.1| ABC-type uncharacterized transport system, permease component [Janthinobacterium sp. Marseille] gb|ABR89712.1| ABC-type uncharacterized transport system, permease component [Janthinobacterium sp. Marseille] Length = 354 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 287/356 (80%), Positives = 324/356 (91%), Gaps = 2/356 (0%) Query: 5 MNIWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAAS 64 MN+WSYI+KRVLLM+PTL GV+AITFAVIQFVPGGPVEQA++E+KG+ G G +GGG S Sbjct: 1 MNLWSYIIKRVLLMLPTLLGVIAITFAVIQFVPGGPVEQALVELKGQFGAGGEAGGGGGS 60 Query: 65 GASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVK 124 S YRGRQGID +R+AEIK LYGFDKPPVERFW MLKGF TFDLG+SFYHH DVW LV Sbjct: 61 --SQYRGRQGIDAERVAEIKALYGFDKPPVERFWQMLKGFATFDLGQSFYHHKDVWDLVV 118 Query: 125 SKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLL 184 SKLPVSI++G+WTF L+Y IS+PLGIAKAVREG+RFD+ +T +VL+GYSIPGF+LGVFLL Sbjct: 119 SKLPVSITLGMWTFFLTYFISLPLGIAKAVREGSRFDSLSTIVVLIGYSIPGFILGVFLL 178 Query: 185 VLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNT 244 V+F GGSFVQWF LRGLTSDNWE LSL+GK+ DYLWHI LPVTASV GSFA++TMLT+NT Sbjct: 179 VMFGGGSFVQWFSLRGLTSDNWEQLSLLGKVLDYLWHIALPVTASVAGSFAMMTMLTKNT 238 Query: 245 FLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFS 304 FLEEIRKQYVLTARAKGLSE RVLYKHVFRNALIPLVTGFP+AFI +FF GSLLIETLFS Sbjct: 239 FLEEIRKQYVLTARAKGLSENRVLYKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFS 298 Query: 305 LDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 LDG+GLL+YES IRRDYPVVMGTLYLFTL+GLVVKL+GDLCYVWADPR+QFESL + Sbjct: 299 LDGLGLLSYESVIRRDYPVVMGTLYLFTLVGLVVKLLGDLCYVWADPRLQFESLNQ 354 >ref|YP_001100578.1| oligopeptide ABC transporter membrane protein [Herminiimonas arsenicoxydans] Length = 339 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 278/343 (81%), Positives = 307/343 (89%), Gaps = 4/343 (1%) Query: 18 MIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASAYRGRQGIDE 77 M+PTL GVVAITFAVIQFVPGGPVEQA++E+KG+ +G GAS YRGRQGID Sbjct: 1 MLPTLLGVVAITFAVIQFVPGGPVEQALMELKGQ----VGAGEATGGGASQYRGRQGIDA 56 Query: 78 QRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWT 137 +R+AEIK LYGFDKP ERFW MLKGF TFDLGKSFYHH DVW LV SKLPVSI++GLWT Sbjct: 57 ERVAEIKALYGFDKPASERFWQMLKGFATFDLGKSFYHHKDVWDLVVSKLPVSITLGLWT 116 Query: 138 FLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFP 197 F L+Y ISVPLGIAKAVREG+RFD T+ +VLVGYSIPGF+LGVFLLV+F GGSFVQWFP Sbjct: 117 FFLTYFISVPLGIAKAVREGSRFDAITSMMVLVGYSIPGFILGVFLLVMFGGGSFVQWFP 176 Query: 198 LRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTA 257 LRGLTSD+WE LSL+GK+ DYLWHITLPVTASV GSFAV+TMLT+NTFL+EIRKQYVLTA Sbjct: 177 LRGLTSDDWEQLSLLGKVLDYLWHITLPVTASVAGSFAVMTMLTKNTFLDEIRKQYVLTA 236 Query: 258 RAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAI 317 RAKGLSE VLYKHVFRNALIPLVTGFP+AFI +FFAGSLLIETLFSLDG+GLL+YES I Sbjct: 237 RAKGLSENAVLYKHVFRNALIPLVTGFPAAFIGAFFAGSLLIETLFSLDGLGLLSYESVI 296 Query: 318 RRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 RRDYPVVMGTLYLFTLIGLVVKL+GDLCYVWADPR+QFESL + Sbjct: 297 RRDYPVVMGTLYLFTLIGLVVKLLGDLCYVWADPRLQFESLNR 339 >ref|YP_001156015.1| binding-protein-dependent transport systems inner membrane component [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34451.1| binding-protein-dependent transport systems inner membrane component [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 354 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 249/349 (71%), Positives = 301/349 (86%), Gaps = 1/349 (0%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASA 68 +YI KR+LLMIPTL GV+ +TFAV+QFVPGGPVEQ +LE+KG+G + GA+ Sbjct: 3 TYIFKRLLLMIPTLLGVLTLTFAVVQFVPGGPVEQMVLELKGKGSAAVGGSESSGGGAT- 61 Query: 69 YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLP 128 YRGRQG+D QR+ E+K LYGFDKPP+ER++ ML F FDLG+S+Y H VW LV SKLP Sbjct: 62 YRGRQGVDAQRLEEVKALYGFDKPPLERYFMMLGRFARFDLGQSYYQHESVWRLVVSKLP 121 Query: 129 VSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFA 188 VSISIGLWTF ++YL+S+PLGIAKAVR+G+RFD+ T+ ++LVGY+IPGFVLGV LLV+F Sbjct: 122 VSISIGLWTFFITYLVSIPLGIAKAVRDGSRFDSVTSTMILVGYAIPGFVLGVLLLVIFG 181 Query: 189 GGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEE 248 GGSF+Q FPLRGLTSDNW LSL+GK+ DYLWH+ LP+TASV+GSFAV+TMLT+N+FLEE Sbjct: 182 GGSFLQIFPLRGLTSDNWSDLSLIGKVMDYLWHLVLPITASVLGSFAVVTMLTKNSFLEE 241 Query: 249 IRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGM 308 IRKQYVLTARAKGL+ER+VL+KHVFRNA++PLVTGFP+AFI +FF GSLLIETLFSLDG+ Sbjct: 242 IRKQYVLTARAKGLAERQVLWKHVFRNAMLPLVTGFPAAFIGAFFTGSLLIETLFSLDGL 301 Query: 309 GLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFES 357 GLL+YES +RRDYPVV GTLYLFTLIGL KL+ DLCYV+ DPR+QF S Sbjct: 302 GLLSYESVMRRDYPVVFGTLYLFTLIGLFTKLISDLCYVYVDPRIQFGS 350 >ref|YP_982246.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] gb|ABM37325.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] Length = 344 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 255/348 (73%), Positives = 297/348 (85%), Gaps = 6/348 (1%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASA 68 SYI+KR+LLMIPTLFGV+ +TFA++QFVPGGPVEQ + +++GR GGE AAS + Sbjct: 3 SYILKRLLLMIPTLFGVLLLTFAMVQFVPGGPVEQMVAQLQGRDSGGER----AASTGAG 58 Query: 69 YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLP 128 YRGRQG+D +RI EIK LYGFDKP ERF+ ML F FDLG SFY H DVW LVK KLP Sbjct: 59 YRGRQGVDAERIEEIKALYGFDKPVHERFFQMLGRFARFDLGNSFYQHKDVWQLVKEKLP 118 Query: 129 VSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFA 188 VS+S+GLWTF LSYLI+VPLG+AKAVR G+RFD TT +VLVGY+IPGFVLGV LLV+F Sbjct: 119 VSVSLGLWTFFLSYLIAVPLGVAKAVRAGSRFDFVTTLVVLVGYAIPGFVLGVALLVVFG 178 Query: 189 GGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEE 248 G +QWFPLRGLTS NW++L +ITDYLWHITLP+TA V+GSFAV T+LT+N+FLEE Sbjct: 179 GQ--LQWFPLRGLTSANWDTLGWGARITDYLWHITLPITAMVLGSFAVTTVLTKNSFLEE 236 Query: 249 IRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGM 308 IRKQYVLTARAKGLSER+VL+KHVFRNALIP++TGFP+AFI +FF GSLLIETLFSLDG+ Sbjct: 237 IRKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGL 296 Query: 309 GLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 GLL+YES IRRDYPVV+GTLYLFTLIGLV KLV DLCYVW DPRV+F+ Sbjct: 297 GLLSYESVIRRDYPVVLGTLYLFTLIGLVTKLVSDLCYVWVDPRVKFD 344 >ref|YP_002944630.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gb|ACS19364.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 344 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 252/348 (72%), Positives = 296/348 (85%), Gaps = 6/348 (1%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASA 68 SYI+KR+LLMIPTL GV+ ITF VIQFVPGGPVEQ + +++GR GGE + AASGA Sbjct: 3 SYILKRLLLMIPTLLGVLVITFGVIQFVPGGPVEQMVAQLQGRDSGGERA---AASGA-G 58 Query: 69 YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLP 128 YRGRQG+D QR+ +I++LYGFDKP ER WTMLK F FDLG SFY DVW L+K K+P Sbjct: 59 YRGRQGLDPQRVEDIRKLYGFDKPAHERLWTMLKSFARFDLGTSFYQRKDVWQLIKEKMP 118 Query: 129 VSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFA 188 VSIS+GLWTF +SYLI+VPLG+AKAVR GTRFD TT +VLVGY+IPGFVLGV LLV+F Sbjct: 119 VSISLGLWTFFISYLIAVPLGVAKAVRAGTRFDFVTTLIVLVGYAIPGFVLGVALLVIFG 178 Query: 189 GGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEE 248 G +QWFPLRGLTS NWES++ ++ DYLWHI LPVT+ V+GSFAV MLT+N+FLEE Sbjct: 179 GQ--LQWFPLRGLTSPNWESMNWGARVVDYLWHIALPVTSMVLGSFAVTAMLTKNSFLEE 236 Query: 249 IRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGM 308 IRKQYVLTARAKGLS+R+VL+KHVFRNALIP++TGFPSAFI +FF GSLLIETLF+LDG+ Sbjct: 237 IRKQYVLTARAKGLSQRQVLWKHVFRNALIPIITGFPSAFIGAFFTGSLLIETLFTLDGL 296 Query: 309 GLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 GLL+YES IRRDYPVV+GTLYLFTLIGLV KL+ DLCYVW DPRV+F+ Sbjct: 297 GLLSYESVIRRDYPVVLGTLYLFTLIGLVTKLISDLCYVWVDPRVKFD 344 >ref|YP_549238.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gb|ABE44340.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] Length = 344 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 256/348 (73%), Positives = 295/348 (84%), Gaps = 6/348 (1%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASA 68 SYI+KR+LLMIPTL GV+ +TF ++QFVPGGPVEQ + +++GR GGE + AASGA Sbjct: 3 SYILKRLLLMIPTLLGVLLLTFVMVQFVPGGPVEQMVAQLQGRDSGGERA---AASGA-G 58 Query: 69 YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLP 128 YRGRQG+D QRI EIK LYGFDKP ERF+ ML F FDLG SFY H DVW LVK KLP Sbjct: 59 YRGRQGVDAQRIEEIKALYGFDKPVHERFFQMLGRFARFDLGNSFYQHKDVWQLVKEKLP 118 Query: 129 VSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFA 188 VS+S+GLWTF +SYLI+VPLG+AKAVR GTRFD TT +VLVGY+IPGFVLGV LLV+F Sbjct: 119 VSVSLGLWTFFISYLIAVPLGVAKAVRAGTRFDFVTTLIVLVGYAIPGFVLGVALLVVFG 178 Query: 189 GGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEE 248 G +QWFPLRGLTS NWESL +ITDYLWHITLP+ A V+GSFAV +LT+N+FLEE Sbjct: 179 GQ--LQWFPLRGLTSPNWESLGWGARITDYLWHITLPIIAMVLGSFAVTAVLTKNSFLEE 236 Query: 249 IRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGM 308 IRKQYVLTARAKGLSER+VL+KHVFRNALIP++TGFP+AFI +FF GSLLIETLFSLDG+ Sbjct: 237 IRKQYVLTARAKGLSERQVLWKHVFRNALIPIITGFPAAFIGAFFTGSLLIETLFSLDGL 296 Query: 309 GLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFE 356 GLL+YES IRRDYPVV+GTLYLFTLIGLV KLV DLCYVW DPRV+F+ Sbjct: 297 GLLSYESVIRRDYPVVLGTLYLFTLIGLVTKLVSDLCYVWVDPRVKFD 344 >ref|YP_296336.1| binding-protein dependent transport system inner membrane protein [Ralstonia eutropha JMP134] gb|AAZ61492.1| Binding-protein-dependent transport systems inner membrane component [Ralstonia eutropha JMP134] Length = 350 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 253/352 (71%), Positives = 304/352 (86%), Gaps = 4/352 (1%) Query: 9 SYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGGGEASGGGAASGASA 68 +Y+ KR+LLMIPTL GV+ +TF VIQFVPGGPVEQ MLE+KGR G A+ G + Sbjct: 3 AYLFKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLELKGR----GGGSGEASGGGAE 58 Query: 69 YRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKSKLP 128 YRGR+G+D ++I EI+ LYGFDKPP+ER++ MLK F FDLG+S++ H VW LVKSKLP Sbjct: 59 YRGRRGVDPEKIKEIQALYGFDKPPLERYFLMLKRFARFDLGQSYFQHRSVWELVKSKLP 118 Query: 129 VSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLVLFA 188 VS+S+GLWTF L+YLISVPLGI+KA+R G+RFD T+ +VLVGY+IPGFVLGV LLVLF Sbjct: 119 VSVSLGLWTFFLTYLISVPLGISKAIRAGSRFDVVTSMIVLVGYAIPGFVLGVLLLVLFG 178 Query: 189 GGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTFLEE 248 GG+FVQWFPLRGLTSDNW+ LSLMGK+ DYLWH+ LP+TASV+GSFAV+TMLT+N FL+E Sbjct: 179 GGTFVQWFPLRGLTSDNWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLDE 238 Query: 249 IRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSLDGM 308 IR+QYVLTARAKGLSERRVL+KHVFRNALIPLVTGFP+AFI +FF GSLLIETLFSLDG+ Sbjct: 239 IRRQYVLTARAKGLSERRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGL 298 Query: 309 GLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 GLL+YE+ +RRDYPVV+GTLYLFTLIGLV +L+ D+CYV DPR+ FE+L K Sbjct: 299 GLLSYEAVLRRDYPVVLGTLYLFTLIGLVTRLISDVCYVLVDPRIHFEALHK 350 >gb|AEG69492.1| dipeptide transporter, membrane component of ABC superfamily [Ralstonia solanacearum Po82] Length = 351 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 250/355 (70%), Positives = 306/355 (86%), Gaps = 5/355 (1%) Query: 7 IWSYIVKRVLLMIPTLFGVVAITFAVIQFVPGGPVEQAMLEMKGRGGG-GEASGGGAASG 65 +++Y++KR+LL+IPTL GV+ +TF VIQFVPGGPVEQ MLEMKGRGGG EASGGG Sbjct: 1 MFAYLIKRLLLLIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGGIVEASGGGGME- 59 Query: 66 ASAYRGRQGIDEQRIAEIKQLYGFDKPPVERFWTMLKGFLTFDLGKSFYHHGDVWTLVKS 125 YRGR+G+D +++ EI+ LYGFDK PVER++ ML F FDLG+S++ H VW L+KS Sbjct: 60 ---YRGRRGVDPEKLKEIRALYGFDKGPVERYFLMLGRFARFDLGESYFQHRSVWELIKS 116 Query: 126 KLPVSISIGLWTFLLSYLISVPLGIAKAVREGTRFDTATTGLVLVGYSIPGFVLGVFLLV 185 KLPVSISIGLWTF L+YLISVPLGIAKAVR G+RFD ++ +VLVGY+IPGFVLGV LLV Sbjct: 117 KLPVSISIGLWTFFLTYLISVPLGIAKAVRAGSRFDLVSSVIVLVGYAIPGFVLGVLLLV 176 Query: 186 LFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYLWHITLPVTASVIGSFAVITMLTRNTF 245 LF GG+F QWFP+RGLTSDNW+ LSL GK+TDYLWHI LP+TASV+GSFA++TMLT+N F Sbjct: 177 LFGGGTFFQWFPIRGLTSDNWDQLSLAGKVTDYLWHIALPITASVVGSFAMVTMLTKNAF 236 Query: 246 LEEIRKQYVLTARAKGLSERRVLYKHVFRNALIPLVTGFPSAFIASFFAGSLLIETLFSL 305 LEEIRKQYVLTAR+KGLSERRVL+KH+FRNA+IPLVTGFP+AFI +FFAGSLLIE LFSL Sbjct: 237 LEEIRKQYVLTARSKGLSERRVLWKHIFRNAMIPLVTGFPAAFIGAFFAGSLLIEKLFSL 296 Query: 306 DGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVKLVGDLCYVWADPRVQFESLAK 360 DGMGL++YE+ ++RDYPVV+GTLY+FTLIGL +L+ D+CYV DPR+ F ++ + Sbjct: 297 DGMGLMSYEAVVQRDYPVVLGTLYVFTLIGLATRLISDVCYVLVDPRIHFGAIGR 351