BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0006.0005.p (509 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776807.1| lytic murein transglycosylase [Herbaspirillu... 1041 0.0 ref|YP_004752119.1| membrane-bound lytic murein transglycosylase... 732 0.0 ref|YP_001352898.1| membrane-bound lytic murein transglycosylase... 655 0.0 ref|ZP_08272593.1| Membrane-bound lytic murein transglycosylase ... 650 0.0 ref|YP_001100575.1| lytic murein transglycosylase C, membrane-bo... 627 e-177 ref|ZP_04577118.1| membrane-bound lytic Murein transglycosylase ... 564 e-158 ref|ZP_04579254.1| membrane-bound lytic Murein transglycosylase ... 534 e-149 ref|YP_584353.1| soluble lytic murein transglycosylase or relate... 525 e-146 ref|YP_296394.1| peptidoglycan-binding LysM:lytic transglycosyla... 523 e-146 ref|YP_003745408.1| membrane-bound lytic murein transglycosylase... 517 e-144 >ref|YP_003776807.1| lytic murein transglycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ64899.1| lytic murein transglycosylase protein [Herbaspirillum seropedicae SmR1] Length = 509 Score = 1041 bits (2691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/509 (99%), Positives = 509/509 (100%) Query: 1 MQRTLKQLAIAALFCAGAPLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRK 60 MQRTLKQLAIAALFCAGAPLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRK Sbjct: 1 MQRTLKQLAIAALFCAGAPLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRK 60 Query: 61 GFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIE 120 GFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIE Sbjct: 61 GFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIE 120 Query: 121 SAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFG 180 SAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFG Sbjct: 121 SAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFG 180 Query: 181 DWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIANP 240 DWQLALAAYNWGEGSVQRAVNRNLAAG+PIDFNTLSAQMPNETRNYVPKLQAVKNIIANP Sbjct: 181 DWQLALAAYNWGEGSVQRAVNRNLAAGMPIDFNTLSAQMPNETRNYVPKLQAVKNIIANP 240 Query: 241 AAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTK 300 AAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTK Sbjct: 241 AAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTK 300 Query: 301 ILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPR 360 ILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPR Sbjct: 301 ILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPR 360 Query: 361 MVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIA 420 MVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIA Sbjct: 361 MVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIA 420 Query: 421 SRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPARRQVASAKA 480 SRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPARRQVASAKA Sbjct: 421 SRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPARRQVASAKA 480 Query: 481 PVRKAAPAPARKVAGKPLTLASGNDARKQ 509 PVRKAAPAPARKVAGKPLTLASGNDARKQ Sbjct: 481 PVRKAAPAPARKVAGKPLTLASGNDARKQ 509 >ref|YP_004752119.1| membrane-bound lytic murein transglycosylase D [Collimonas fungivorans Ter331] gb|AEK61296.1| Membrane-bound lytic murein transglycosylase D precursor [Collimonas fungivorans Ter331] Length = 502 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/511 (71%), Positives = 416/511 (81%), Gaps = 17/511 (3%) Query: 2 QRTLKQLAIAALFCAGAPLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRKG 61 Q LK A AAL G PLL+ ANDISIY F+ I+P + GM +DIW RIRKG Sbjct: 3 QLKLKTFAFAALAFFGTPLLAQANDISIYTPTFSLIDPNDPSAGMLGMEQVDIWARIRKG 62 Query: 62 FGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIES 121 FGIPDLDN V SQT +YS+RP+Y +RTTVRASRYLFHVVQELEKRGMPTELALLPFIES Sbjct: 63 FGIPDLDNQQVVSQTDFYSARPEYFERTTVRASRYLFHVVQELEKRGMPTELALLPFIES 122 Query: 122 AFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFGD 181 AFNP+A S+AKAAGMWQF+P+TGRDYNLKQNMF D+RRDVLASTDAALTYLQKLYGMFGD Sbjct: 123 AFNPQAYSSAKAAGMWQFVPATGRDYNLKQNMFKDDRRDVLASTDAALTYLQKLYGMFGD 182 Query: 182 WQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIANPA 241 WQLALAAYNWGEGSVQRA+N+N AAGLPIDFN+L+ MP ETRNYVPKLQAVKNIIA P Sbjct: 183 WQLALAAYNWGEGSVQRAINKNQAAGLPIDFNSLAPLMPAETRNYVPKLQAVKNIIAAPE 242 Query: 242 AFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTKI 301 ++IALPKVDNQPYFVTIGKTR+IDVKVAAQLAELSLDEFKALNPQFNRPVIIG DTKI Sbjct: 243 MYNIALPKVDNQPYFVTIGKTRDIDVKVAAQLAELSLDEFKALNPQFNRPVIIGSSDTKI 302 Query: 302 LLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPRM 361 LLPESNAEKFK N++KWTQ S+WT+HTVSSARERIETIA++F TTP +IR VN IPPRM Sbjct: 303 LLPESNAEKFKNNLTKWTQTLSSWTSHTVSSARERIETIAARFDTTPAIIREVNHIPPRM 362 Query: 362 VLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIAS 421 +LKAGSTILVPKTE ++ +D+T E+ADNA +A+ PD PETRRIYVK GKRDTLA IAS Sbjct: 363 LLKAGSTILVPKTEASS---SDITAEVADNATMAVTPDAPETRRIYVKVGKRDTLASIAS 419 Query: 422 RYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPN--VAGHATTRVAS---HHRAAPARRQVA 476 RYRV+VAQ+K WNGL RD ++ GQSLQLQVPN VA ++ ++ A +H+A + + + Sbjct: 420 RYRVSVAQVKAWNGLHRDGVSRGQSLQLQVPNRMVASNSGSKKAGNVRYHKATASTSRSS 479 Query: 477 SAKAPVRKAAPAPARKVAGKPLTLASGNDAR 507 K +K KP+ LAS AR Sbjct: 480 KNKVAAKKNT---------KPVVLASSRGAR 501 >ref|YP_001352898.1| membrane-bound lytic murein transglycosylase D precursor [Janthinobacterium sp. Marseille] gb|ABR88365.1| membrane-bound lytic murein transglycosylase D precursor [Janthinobacterium sp. Marseille] Length = 531 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/496 (65%), Positives = 391/496 (78%), Gaps = 25/496 (5%) Query: 21 LSYANDISIYPAPFNAI-------NPELAGNALPGM---NDIDIWTRIRKGFGIPDL-DN 69 LS+A+D+S+ P+N + NP LA + L +D+D+W RIRKGF IPDL DN Sbjct: 33 LSHASDLSL--PPYNWVQDAALQDNPSLANDPLSEFVVASDVDVWARIRKGFAIPDLTDN 90 Query: 70 SLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPEALS 129 LV +QT WYSSRPDYI RTT RAS YL+HVV+ELEKRGMPTELALLPFIESAFNP+A S Sbjct: 91 QLVINQTIWYSSRPDYIGRTTKRASLYLYHVVEELEKRGMPTELALLPFIESAFNPQAYS 150 Query: 130 TAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFGDWQLALAAY 189 TAKAAGMWQFIPSTGRD+NLKQNMF DERR VLASTDAALTYLQKLYGMFGDWQLALAAY Sbjct: 151 TAKAAGMWQFIPSTGRDFNLKQNMFKDERRSVLASTDAALTYLQKLYGMFGDWQLALAAY 210 Query: 190 NWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIANPAAFDIALPK 249 NWGEGSVQRA+ + AAG+ DFN+LSA MP ETRNYVPKLQAVKNIIA+P A+ I L K Sbjct: 211 NWGEGSVQRAIRKAEAAGVGTDFNSLSAYMPAETRNYVPKLQAVKNIIASPDAYGITLLK 270 Query: 250 VDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTKILLPESNAE 309 VDNQPYFV+I KTR+IDVK+AAQLAEL +DEFKALNPQFNRPVI G +T+ILLP+SNAE Sbjct: 271 VDNQPYFVSIAKTRDIDVKLAAQLAELPMDEFKALNPQFNRPVITGSSNTQILLPQSNAE 330 Query: 310 KFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPRMVLKAGSTI 369 KFKAN++KW+ A S+WTAH V++ARERIETIA+KF TTP+VIR VN IPP+M+LKAGST+ Sbjct: 331 KFKANLAKWSHALSSWTAHKVTNARERIETIAAKFHTTPQVIREVNNIPPKMLLKAGSTV 390 Query: 370 LVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIASRYRVTVAQ 429 LVP+T+ETA D+T E+ADNA LA+ PDVP+T+RI V K+DT+ +ASRY+V++AQ Sbjct: 391 LVPRTDETA--QKDITQEVADNATLAMTPDVPDTKRINVVVKKKDTINTLASRYKVSIAQ 448 Query: 430 IKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPARRQVASAKAPVRKAAPAP 489 IK WN L D LA+GQ L++ VP A V + +AAP + + P ++A+ P Sbjct: 449 IKSWNNLSHDKLASGQKLEIHVPYKA------VVAKSKAAPGK----TVAKPTKQASRTP 498 Query: 490 ARKVAGKPLTLASGND 505 A+ K L S N+ Sbjct: 499 AKTTKAKTLVAKSNNN 514 >ref|ZP_08272593.1| Membrane-bound lytic murein transglycosylase D precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF33946.1| Membrane-bound lytic murein transglycosylase D precursor [Oxalobacteraceae bacterium IMCC9480] Length = 491 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/483 (66%), Positives = 379/483 (78%), Gaps = 11/483 (2%) Query: 2 QRTLKQLAIAALFCAGAPLLSYANDISIYPAPFN-AINPELAGNALPGMNDIDIWTRIRK 60 Q+ L+ L A AP S AND+SI P+ + +P + + ++D+W RIR Sbjct: 3 QKLLRTLTFTAFLLLAAPHASQANDLSISPSITDYTYDPSDPVTQVLAIEELDVWGRIRN 62 Query: 61 GFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIE 120 GFGIPDLDN LV SQT WYS+RP+YIQRTT+RASRYLFHV+QELEKR MPTELALLPFIE Sbjct: 63 GFGIPDLDNPLVLSQTNWYSARPEYIQRTTLRASRYLFHVLQELEKRDMPTELALLPFIE 122 Query: 121 SAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFG 180 SAFNPEA S+AKA+GMWQFIPSTG D+NLKQNMF DERRDVLASTDAALTYLQKL+GMFG Sbjct: 123 SAFNPEAYSSAKASGMWQFIPSTGLDFNLKQNMFKDERRDVLASTDAALTYLQKLHGMFG 182 Query: 181 DWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIANP 240 DWQLALAAYNWGEGSVQRA+ +N A GL DFN+LSA MP ETRNYVPKLQAVKNIIA P Sbjct: 183 DWQLALAAYNWGEGSVQRAIKKNQANGLATDFNSLSALMPAETRNYVPKLQAVKNIIATP 242 Query: 241 AAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTK 300 AF I LPK DNQPYFVTIG+TR+ID+KVAAQLAE++LDEFK+LNPQFNRPVI G TK Sbjct: 243 EAFGITLPKADNQPYFVTIGRTRDIDLKVAAQLAEITLDEFKSLNPQFNRPVITGSASTK 302 Query: 301 ILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPR 360 ILLP+ NAE+FK N+++W + S+W AHTV+ RERIE IA+ F T P+V+R VN IPP Sbjct: 303 ILLPQQNAERFKINLAQWNRPLSSWMAHTVTK-RERIEAIATLFNTEPQVLRDVNHIPPN 361 Query: 361 MVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIA 420 M LKAGSTILVPKT + A +TD+T E+ADNA +++ PDVP+ RRI V+ GKRD LA IA Sbjct: 362 MRLKAGSTILVPKTAKAA--ETDITAEVADNAVISMEPDVPDFRRIAVRVGKRDNLASIA 419 Query: 421 SRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVA----GHATTRVASHHRAAPARRQVA 476 RY VTVAQ+K WN L+RDTL +GQ+LQ+QVP A G T RVA++ P R+ Sbjct: 420 QRYNVTVAQVKNWNDLQRDTLRSGQTLQVQVPYRASAKTGQRTVRVAANR---PHRKDAG 476 Query: 477 SAK 479 S K Sbjct: 477 SDK 479 >ref|YP_001100575.1| lytic murein transglycosylase C, membrane-bound [Herminiimonas arsenicoxydans] emb|CAL62453.1| Putative lytic transglycosylase [Herminiimonas arsenicoxydans] Length = 514 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 311/484 (64%), Positives = 380/484 (78%), Gaps = 23/484 (4%) Query: 7 QLAIAALFCAGAPLLSYA-NDISIYPAPFNAI--------NPELAGNALPGM---NDIDI 54 +L A++F G +S+A +D+S+ P +++ NP LA + L +D+D+ Sbjct: 11 KLVAASIFLLGISSISHAASDLSL-PYSYSSWAQDAALQDNPNLANDPLSEFVVASDVDV 69 Query: 55 WTRIRKGFGIPDL-DNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTEL 113 W RIRKGF IPDL DN LV +QT WYSSRP+YI RTT RAS YL+HVV+ELEKRGMPTEL Sbjct: 70 WARIRKGFAIPDLVDNQLVINQTVWYSSRPEYIGRTTKRASLYLYHVVEELEKRGMPTEL 129 Query: 114 ALLPFIESAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQ 173 ALLPFIESAFNP+A STAKAAGMWQFIPSTG D+NLKQNMF DERR VLASTDAALTYLQ Sbjct: 130 ALLPFIESAFNPQAYSTAKAAGMWQFIPSTGLDFNLKQNMFKDERRSVLASTDAALTYLQ 189 Query: 174 KLYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAV 233 +LYGMFGDWQLALAAYNWGEGSVQRA+ + AAG+ DFN+LSA MP ET+NYVPKLQAV Sbjct: 190 RLYGMFGDWQLALAAYNWGEGSVQRAIKKAEAAGVGTDFNSLSAYMPAETKNYVPKLQAV 249 Query: 234 KNIIANPAAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVI 293 KNIIA P A+ I+L KVDNQPYFV++ KTR+IDVK+AAQLAEL ++EFKALNPQFNRPVI Sbjct: 250 KNIIATPDAYGISLLKVDNQPYFVSVAKTRDIDVKLAAQLAELPMEEFKALNPQFNRPVI 309 Query: 294 IGGEDTKILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIRS 353 G +T+ILLP+ NAEKFK N++KW+ A S+WTAH +++ARERIET+A++F TTP+VIR Sbjct: 310 TGSSNTQILLPQGNAEKFKINLAKWSHALSSWTAHKITNARERIETVAARFHTTPQVIRE 369 Query: 354 VNQIPPRMVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKR 413 VN IPP+MVLKAGSTILVP+ E A D+T E+ADNARLA+APD P+++RI V K+ Sbjct: 370 VNNIPPKMVLKAGSTILVPRMEGMA--QKDITQEVADNARLAMAPDAPDSKRINVTVKKQ 427 Query: 414 DTLAGIASRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPARR 473 D+ IA+RY+VT+AQIK WN L+ D LA GQ L+L +P R+AS + A + R Sbjct: 428 DSFTSIANRYKVTIAQIKNWNNLRGDKLAHGQKLELHIP-------FRIASKAKPAESGR 480 Query: 474 QVAS 477 + S Sbjct: 481 KQTS 484 >ref|ZP_04577118.1| membrane-bound lytic Murein transglycosylase D [Oxalobacter formigenes HOxBLS] gb|EEO28080.1| membrane-bound lytic Murein transglycosylase D [Oxalobacter formigenes HOxBLS] Length = 558 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 277/463 (59%), Positives = 338/463 (73%), Gaps = 21/463 (4%) Query: 8 LAIAALFCAGAPLLSYANDISI--------YPAPFNAINPELAGNA----------LPGM 49 LA+A F AP L A DI++ A +A + + GNA + + Sbjct: 12 LALAGCFTVTAPALVQARDITLPKYSKDAQLAAFHSATDLNVTGNARFDEEDPLTEILSI 71 Query: 50 NDIDIWTRIRKGFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGM 109 N++D+W RIR GFGIPDLDN LVE+ WYS RP+Y QRTT R S+YLFH+VQELEKR M Sbjct: 72 NEVDVWGRIRSGFGIPDLDNRLVENHMNWYSKRPEYFQRTTQRGSKYLFHIVQELEKRNM 131 Query: 110 PTELALLPFIESAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAAL 169 PTELALLPFIESA+NP A S AKA G+WQFIPSTGR Y+L QN F DERRD+L+ST+AAL Sbjct: 132 PTELALLPFIESAYNPHARSIAKAEGLWQFIPSTGRHYDLGQNAFRDERRDILSSTEAAL 191 Query: 170 TYLQKLYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPK 229 TYLQKL+ MFGDWQLALA+YNWGEGSV RA+ + AG P+ FN++SA MP ETRNYVPK Sbjct: 192 TYLQKLHDMFGDWQLALASYNWGEGSVMRAIKKAERAGKPVTFNSISAYMPAETRNYVPK 251 Query: 230 LQAVKNIIANPAAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFN 289 LQAVKN+IANP + I LP V+NQPYFVTIGKTR+IDVKVAA+LAE+SLDEF+ALNPQF Sbjct: 252 LQAVKNLIANPRRYGIDLPSVENQPYFVTIGKTRDIDVKVAAKLAEMSLDEFRALNPQFG 311 Query: 290 RPVIIGGEDTKILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPE 349 VI GG + KILLP NAEKF+ N+S+WTQ S+WTA+ V+ +RE++E IA++F T+P+ Sbjct: 312 PYVIAGGNEVKILLPGENAEKFRRNLSRWTQPLSSWTAYQVTGSREKVEDIAARFNTSPD 371 Query: 350 VIRSVNQIPPRMVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVK 409 +IR N IP R VLK GS ILVPK TAA D D+ PE+ +NARL D+P TR + V Sbjct: 372 LIRQANNIPSRAVLKFGSAILVPK---TAANDRDIAPELVENARLVWERDLPSTRLVRVP 428 Query: 410 AGKRDTLAGIASRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVP 452 K LA IA RYRV+VA++K WN + DT G L++ VP Sbjct: 429 VKKPVKLASIAKRYRVSVAELKSWNKISGDTAGKGTILKVHVP 471 >ref|ZP_04579254.1| membrane-bound lytic Murein transglycosylase D [Oxalobacter formigenes OXCC13] gb|EEO30227.1| membrane-bound lytic Murein transglycosylase D [Oxalobacter formigenes OXCC13] Length = 529 Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust. Identities = 251/421 (59%), Positives = 315/421 (74%), Gaps = 3/421 (0%) Query: 33 PFNAINPELAGNALPGMNDIDIWTRIRKGFGIPDLDNSLVESQTQWYSSRPDYIQRTTVR 92 P + N + + +N++D+W RIR GF IPDL N LV++ +Y +P+Y RTT R Sbjct: 29 PLSQFNDDDPLTEILSINEVDVWGRIRHGFAIPDLSNPLVQNHENYYLKKPEYFARTTKR 88 Query: 93 ASRYLFHVVQELEKRGMPTELALLPFIESAFNPEALSTAKAAGMWQFIPSTGRDYNLKQN 152 S+YLFH+VQELEKRGMPTELALLPFIESA+NP A S AKA G+WQFIPSTGR Y+L QN Sbjct: 89 GSKYLFHIVQELEKRGMPTELALLPFIESAYNPHARSIAKAEGLWQFIPSTGRHYDLAQN 148 Query: 153 MFTDERRDVLASTDAALTYLQKLYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDF 212 F DERRD+L STDAALTYLQ+LY MFGDWQLALA+YNWGEGSV RA+ + AG PI F Sbjct: 149 AFRDERRDILQSTDAALTYLQRLYNMFGDWQLALASYNWGEGSVMRAIKKAERAGKPITF 208 Query: 213 NTLSAQMPNETRNYVPKLQAVKNIIANPAAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQ 272 N++SA MP ETRNYVPKLQAVKNIIA+ + + LP V+NQPYFVTIGKTR+IDVKVAA+ Sbjct: 209 NSISAYMPAETRNYVPKLQAVKNIIAHADQYGVKLPAVENQPYFVTIGKTRDIDVKVAAK 268 Query: 273 LAELSLDEFKALNPQFNRPVIIGGEDTKILLPESNAEKFKANMSKWTQAFSTWTAHTVSS 332 LAE++LD+F+ALNPQF VI GG + KILLP+ NAEKF+ N+ KW S+WTA+ V+ Sbjct: 269 LAEMTLDDFRALNPQFGPYVIAGGNEVKILLPKENAEKFRKNLDKWPHPLSSWTAYQVTG 328 Query: 333 ARERIETIASKFGTTPEVIRSVNQIPPRMVLKAGSTILVPKTEETAALDTDLTPEIADNA 392 RE++E IA+KF T+P++IR N IP R LK GS ILVPK TA + D+ PE+ ++A Sbjct: 329 TREKVEDIAAKFNTSPDIIRHANNIPARTNLKFGSAILVPK---TAGFNQDIAPELVNSA 385 Query: 393 RLAIAPDVPETRRIYVKAGKRDTLAGIASRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVP 452 R+A D P TR + V K+ +A IA RYRV+VAQ+K WN +K D++ G L++ VP Sbjct: 386 RIAWEQDAPATRLVSVPVRKKANVASIAKRYRVSVAQLKSWNSIKGDSIPKGTILKVHVP 445 Query: 453 N 453 + Sbjct: 446 S 446 >ref|YP_584353.1| soluble lytic murein transglycosylase or related regulatory protein [Cupriavidus metallidurans CH34] gb|ABF09084.1| soluble lytic murein transglycosylase or related regulatory protein [Cupriavidus metallidurans CH34] Length = 570 Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust. Identities = 248/421 (58%), Positives = 322/421 (76%), Gaps = 7/421 (1%) Query: 53 DIWTRIRKGFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTE 112 DIW RIRKGF +PDL+ +LV+ +TQWY++RPDY++R R+SRYL+H+V+ELE+R MPTE Sbjct: 80 DIWDRIRKGFAMPDLEGTLVDDRTQWYAARPDYMERMVGRSSRYLYHIVEELERRKMPTE 139 Query: 113 LALLPFIESAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYL 172 LALLPF+ESAFNP+A STAKAAGMWQFIPSTG+ YNLKQNMF DERRDVLASTDAAL YL Sbjct: 140 LALLPFVESAFNPQAESTAKAAGMWQFIPSTGKTYNLKQNMFRDERRDVLASTDAALDYL 199 Query: 173 QKLYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQA 232 Q+LY MFGDWQLALAAYNWGEG+V RA+ RN A GLP D+ +L+ MP ETR YVPKLQA Sbjct: 200 QRLYDMFGDWQLALAAYNWGEGAVSRAIARNQARGLPTDYASLT--MPTETRYYVPKLQA 257 Query: 233 VKNIIANPAAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPV 292 VKNIIANPAA+ + LP++ + PYFVT+ +R+IDV +AA+LA + LDEFKALNP FNRPV Sbjct: 258 VKNIIANPAAYGVRLPEIPDHPYFVTVTTSRDIDVALAAKLANMPLDEFKALNPSFNRPV 317 Query: 293 IIGGEDTKILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIR 352 I+G + +ILLP NAE+F+ N++ + S+WTA TV S RER+E++A++ + +R Sbjct: 318 ILGAANPQILLPFENAERFQYNLNTYRGGLSSWTAVTVDS-RERVESLAARLNVDVDTLR 376 Query: 353 SVNQIPPRMVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGK 412 +N+IP M LKAGST+++P+TE D D++ + D A LA+ PDVP+ +R+ V+AG+ Sbjct: 377 EINRIPKGMRLKAGSTVMIPRTERH---DQDISASLVDTAMLAVEPDVPDAKRVVVRAGR 433 Query: 413 RDTLAGIASRYRVTVAQIKEWNGLKRDTLAAGQSLQLQV-PNVAGHATTRVASHHRAAPA 471 +DT++ +A RY V+V Q++ WN L L AGQSL L + PN A A PA Sbjct: 434 KDTVSTVARRYGVSVKQVQSWNKLSGSKLVAGQSLVLMLRPNSAAAMRAERAGDEDDTPA 493 Query: 472 R 472 + Sbjct: 494 K 494 >ref|YP_296394.1| peptidoglycan-binding LysM:lytic transglycosylase, catalytic:MLTD_N [Ralstonia eutropha JMP134] gb|AAZ61550.1| Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic:MLTD_N [Ralstonia eutropha JMP134] Length = 557 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 256/454 (56%), Positives = 336/454 (74%), Gaps = 12/454 (2%) Query: 19 PLLSYANDISIYPAPFNAINPELAGNALPGMNDIDIWTRIRKGFGIPDLDNSLVESQTQW 78 PL S + D ++ P ++NP+ G DIW RIR+GF + DL+ +LV+ +TQW Sbjct: 46 PLNSLSVDKTLAPGA-ASMNPDQPGLDWLRGPSTDIWDRIRRGFAMQDLEGTLVDDRTQW 104 Query: 79 YSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTELALLPFIESAFNPEALSTAKAAGMWQ 138 YS RP+Y++R R+SRYL+H+V+ELE+R MPTELALLPF+ESAFNP+A S+AKAAGMWQ Sbjct: 105 YSQRPEYMERMVARSSRYLYHIVEELERRNMPTELALLPFVESAFNPQAQSSAKAAGMWQ 164 Query: 139 FIPSTGRDYNLKQNMFTDERRDVLASTDAALTYLQKLYGMFGDWQLALAAYNWGEGSVQR 198 FIPSTG+ YNLKQNMF DERRDVLASTDAAL YL +LY MFGDW LALAAYNWGEG+V R Sbjct: 165 FIPSTGKTYNLKQNMFRDERRDVLASTDAALDYLARLYDMFGDWHLALAAYNWGEGAVSR 224 Query: 199 AVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQAVKNIIANPAAFDIALPKVDNQPYFVT 258 A+ RN A GLP D+ +L+ MPNETR YVPKLQAVKNIIANPAA+ + LP++ + PYFVT Sbjct: 225 AIARNQARGLPTDYASLT--MPNETRYYVPKLQAVKNIIANPAAYGVRLPEIPDHPYFVT 282 Query: 259 IGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPVIIGGEDTKILLPESNAEKFKANMSKW 318 + +R+IDV +AA+LA +SL+EFKALNP FNRPVI+G + +ILLP NAE+F+ N++ + Sbjct: 283 VTTSRDIDVTLAAKLANMSLEEFKALNPSFNRPVILGASNPQILLPFDNAERFQYNLNTY 342 Query: 319 TQAFSTWTAHTVSSARERIETIASKFGTTPEVIRSVNQIPPRMVLKAGSTILVPKTEETA 378 S+WTA TV + RER+E +A++ P+ +R +N IP M LKAGST+++P++ Sbjct: 343 RGGLSSWTAVTVDN-RERVEALAARLNVDPDTLREINSIPRGMRLKAGSTVMIPRSGHH- 400 Query: 379 ALDTDLTPEIADNARLAIAPDVPETRRIYVKAGKRDTLAGIASRYRVTVAQIKEWNGLKR 438 D D++ +AD+A LA+ PD+P+ RR+ V+AG+RDT+ +A RY V+ +Q++ WN L Sbjct: 401 --DQDISATLADSAMLAMEPDLPDARRLVVRAGRRDTVTSVAHRYGVSPSQVQSWNKLSG 458 Query: 439 DTLAAGQSLQLQVPNVAGHA--TTRVASHHRAAP 470 L AGQSL L VP AG A TR A RA P Sbjct: 459 TKLVAGQSLVLMVPVRAGGAGKATRTA---RAEP 489 >ref|YP_003745408.1| membrane-bound lytic murein transglycosylase d [Ralstonia solanacearum CFBP2957] emb|CBJ42789.1| Membrane-bound lytic murein transglycosylase D [Ralstonia solanacearum CFBP2957] Length = 510 Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust. Identities = 251/449 (55%), Positives = 328/449 (73%), Gaps = 13/449 (2%) Query: 53 DIWTRIRKGFGIPDLDNSLVESQTQWYSSRPDYIQRTTVRASRYLFHVVQELEKRGMPTE 112 D+W RIR+GF +PDL +S V+ + WY+ RP+ +R R++RYL+H+V+ELE+R MPTE Sbjct: 62 DLWARIRQGFSMPDLQSSAVDDRADWYAQRPEAFRRMVDRSNRYLYHIVEELERRNMPTE 121 Query: 113 LALLPFIESAFNPEALSTAKAAGMWQFIPSTGRDYNLKQNMFTDERRDVLASTDAALTYL 172 LALLPF+ESAFNP+A+S+AKAAGMWQFIPSTG+ YNL+QN+F DERRDVLASTDAAL YL Sbjct: 122 LALLPFVESAFNPQAVSSAKAAGMWQFIPSTGKTYNLRQNVFQDERRDVLASTDAALDYL 181 Query: 173 QKLYGMFGDWQLALAAYNWGEGSVQRAVNRNLAAGLPIDFNTLSAQMPNETRNYVPKLQA 232 KL+ FGDWQLALAAYNWGEG+V RA+ RN AAG D+ L+ MP ETR YVPKLQA Sbjct: 182 SKLHDQFGDWQLALAAYNWGEGAVARAIARNQAAGQSTDY--LNLNMPAETRMYVPKLQA 239 Query: 233 VKNIIANPAAFDIALPKVDNQPYFVTIGKTRNIDVKVAAQLAELSLDEFKALNPQFNRPV 292 +KNIIANP + IALP + N PYFVT+ +R+IDV +AA+LA L LDEFKALNP FNRPV Sbjct: 240 IKNIIANPERYGIALPDIPNHPYFVTVTTSRDIDVSLAARLANLPLDEFKALNPSFNRPV 299 Query: 293 IIGGEDTKILLPESNAEKFKANMSKWTQAFSTWTAHTVSSARERIETIASKFGTTPEVIR 352 I+G + +ILLP NAE F+ N++ + S+WTA TV + RER+E +A++ P+ IR Sbjct: 300 ILGASNPQILLPYDNAETFQYNLNTYHGGLSSWTAVTVGN-RERVEALAARLKVDPDTIR 358 Query: 353 SVNQIPPRMVLKAGSTILVPKTEETAALDTDLTPEIADNARLAIAPDVPETRRIYVKAGK 412 +N+IP M LKAGST++VP+ E+ D++PE+A+NA +A+ PDVP+ RR+ V+AGK Sbjct: 359 EINRIPKGMRLKAGSTVVVPRAEDAKEDAPDISPELAENAIMAVEPDVPDLRRVVVRAGK 418 Query: 413 RDTLAGIASRYRVTVAQIKEWNGLKRDTLAAGQSLQLQVPNVAGHATTRVASHHRAAPAR 472 RDTLAG++ RY V+VAQ++ WN L D + G ++ L +P R H RA Sbjct: 419 RDTLAGLSRRYGVSVAQLRAWNQLSGDAIPRGHNVVLMLPQ------ARSGGHVRAV--- 469 Query: 473 RQVASAKAPVRKAAPAPARKVAGKPLTLA 501 +V++A P AP KVAGKP+ A Sbjct: 470 -RVSAASRPAAATVRAPVAKVAGKPVARA 497