BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0032.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACD39253.1| hypothetical protein PACL_0465 [Pseudomonas aerug... 159 4e-37 ref|YP_001562642.1| hypothetical protein Daci_1613 [Delftia acid... 157 2e-36 gb|ACD38959.1| hypothetical protein PACL_0719 [Pseudomonas aerug... 149 4e-34 ref|YP_002438938.1| hypothetical protein PLES_13341 [Pseudomonas... 149 5e-34 gb|EGM14389.1| hypothetical protein PA13_25281 [Pseudomonas aeru... 147 3e-33 gb|AEO73822.1| hypothetical protein PAM18_1335 [Pseudomonas aeru... 144 1e-32 ref|YP_004124000.1| hypothetical protein Alide_4553 [Alicycliphi... 144 2e-32 ref|YP_001039693.1| ParB-like nuclease domain [Burkholderia ambi... 135 8e-30 ref|YP_001177341.1| hypothetical protein Ent638_2623 [Enterobact... 132 9e-29 ref|YP_003296531.1| hypothetical protein ETAE_2485 [Edwardsiella... 129 6e-28 >gb|ACD39253.1| hypothetical protein PACL_0465 [Pseudomonas aeruginosa] Length = 288 Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 108/252 (42%), Positives = 148/252 (58%), Gaps = 11/252 (4%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KR DA + AR + PGFNLR E I L ++ +GG VP LEV ++ Sbjct: 13 GDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVRPREE 70 Query: 64 GLGVDVIDGHRRTTADQELLAEGL-----NIE-WIRIEPFEGNDLERQARILTSQDNRKL 117 G G+ V+DGHRR A +L AEG N E W+ I F GND ER R++TSQ+ RKL Sbjct: 71 G-GMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERVLRVITSQEGRKL 129 Query: 118 LPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTA 177 PLELA GY+RL AFG + E+I +G++RQH++Q+L++ A VQ ++ +G AATTA Sbjct: 130 SPLELAHGYKRLIAFGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQQLISSGAVAATTA 189 Query: 178 IEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARAVL-PMVSAVDAVVLAI 236 VR+HG+ A VLG+ + AAG K+T A+ T P RA+L ++ +V A Sbjct: 190 ARIVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVP-RAILDDLLKVTTDIVDAF 248 Query: 237 PEQVRQALREKP 248 P +R L E P Sbjct: 249 PTALRAGLAEGP 260 >ref|YP_001562642.1| hypothetical protein Daci_1613 [Delftia acidovorans SPH-1] gb|ABX34257.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 339 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/220 (46%), Positives = 135/220 (61%), Gaps = 12/220 (5%) Query: 7 KRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKDGLG 66 KR DA + R ++ + PGFNLR + + IE+L H GGK PPLEV DG G Sbjct: 51 KRADA-VHVRYESLHVEPGFNLRQQDQ-DLEESIEALALHIIDGGKYPPLEVRPRDDG-G 107 Query: 67 VDVIDGHRRTTADQELLAEGLNIE-------WIRIEPFEGNDLERQARILTSQDNRKLLP 119 + ++DGHRR A LA + WI + FEGN+ +R ARI+TS +N+ L P Sbjct: 108 MWIVDGHRRHAAIGRALARNAPLRSPKDGEAWIHVVLFEGNEEDRIARIITSANNKPLTP 167 Query: 120 LELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTAIE 179 E+AEGY+RLKAFG + +I VG+S QH++ +L L AP V+ MV+AG+ +AT A + Sbjct: 168 AEIAEGYKRLKAFGWTPAQIAKKVGRSAQHVQDLLALGNAPSPVREMVKAGQVSATRAAK 227 Query: 180 AVREHGDGAAAVLGEARQEAAAAGKKKIT--TAAIRPWTP 217 A R+HGD A AVLGE Q+A A GKK+IT TA R TP Sbjct: 228 AARKHGDKATAVLGEQLQQAQAKGKKRITAATAEARKPTP 267 >gb|ACD38959.1| hypothetical protein PACL_0719 [Pseudomonas aeruginosa] Length = 288 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 109/252 (43%), Positives = 149/252 (59%), Gaps = 11/252 (4%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KR DA + AR + PGFNLR E I L ++ +GG VP LEV ++ Sbjct: 13 GDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVRPREE 70 Query: 64 GLGVDVIDGHRRTTADQELLAEGL-----NIE-WIRIEPFEGNDLERQARILTSQDNRKL 117 G G+ V+DGHRR A +L AEG N E W+ I F GND ER R++TSQ+ RKL Sbjct: 71 G-GMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERVLRVITSQEGRKL 129 Query: 118 LPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTA 177 PLELA GY+RL AFG + E+I +GK+RQH++Q+L++ A VQ ++ +G AATTA Sbjct: 130 SPLELAHGYKRLIAFGWTVEQIAQKMGKTRQHVDQVLVVGNANTDVQQLISSGAVAATTA 189 Query: 178 IEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARAVL-PMVSAVDAVVLAI 236 + VR+HG+ A VLG+ + AAG K+T A+ T P RA+L ++ +V A Sbjct: 190 AKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVP-RAILDDLLKVTTDIVDAF 248 Query: 237 PEQVRQALREKP 248 P +R L E P Sbjct: 249 PTALRAGLAEGP 260 >ref|YP_002438938.1| hypothetical protein PLES_13341 [Pseudomonas aeruginosa LESB58] ref|YP_002440113.1| hypothetical protein PLES_25131 [Pseudomonas aeruginosa LESB58] emb|CAW26062.1| hypothetical protein PLES_13341 [Pseudomonas aeruginosa LESB58] emb|CAW27239.1| hypothetical protein PLES_25131 [Pseudomonas aeruginosa LESB58] Length = 288 Score = 149 bits (376), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/252 (42%), Positives = 149/252 (59%), Gaps = 11/252 (4%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KR DA + AR + PGFNLR E I L ++ +GG VP LEV ++ Sbjct: 13 GDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVRPREE 70 Query: 64 GLGVDVIDGHRRTTADQELLAEGL-----NIE-WIRIEPFEGNDLERQARILTSQDNRKL 117 G G+ V+DGHRR A +L AEG N E W+ I F GND ER R++TSQ+ RKL Sbjct: 71 G-GMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVAFAGNDAERVLRVITSQEGRKL 129 Query: 118 LPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTA 177 PLELA GY+RL AFG + E+I +G++RQH++Q+L++ A VQ ++ +G AATTA Sbjct: 130 SPLELAHGYKRLIAFGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQQLISSGAVAATTA 189 Query: 178 IEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARAVL-PMVSAVDAVVLAI 236 + VR+HG+ A VLG+ + AAG K+T A+ T P RA+L ++ +V A Sbjct: 190 AKVVRKHGEAAGQVLGQQLAKVIAAGGTKVTPRAVAEPTVP-RAILDDLLKVTTDIVEAF 248 Query: 237 PEQVRQALREKP 248 P +R L E P Sbjct: 249 PTALRAGLAEGP 260 >gb|EGM14389.1| hypothetical protein PA13_25281 [Pseudomonas aeruginosa 138244] Length = 288 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 108/253 (42%), Positives = 149/253 (58%), Gaps = 13/253 (5%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KR DA + AR + PGFNLR E I L ++ +GG VP LEV ++ Sbjct: 13 GDLKRADA-MKARLEDLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVRPREE 70 Query: 64 GLGVDVIDGHRRTTADQELLAEGL-----NIE-WIRIEPFEGNDLERQARILTSQDNRKL 117 G G+ V+DGHRR A +L AEG N E W+ I F GND ER R++TSQ+ RKL Sbjct: 71 G-GMWVVDGHRRRRAYLKLDAEGRLPRDPNGEFWVPIVGFTGNDAERVLRVITSQEGRKL 129 Query: 118 LPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTA 177 PLELA GY+RL AFG + E+I +G++RQH++Q+L++ A VQ ++ +G AATTA Sbjct: 130 SPLELAHGYKRLIAFGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQQLISSGAVAATTA 189 Query: 178 IEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAI-RPWTPPARAVL-PMVSAVDAVVLA 235 + VR+HG+ A VLG+ + AAG K+T A+ P P RA+L ++ +V A Sbjct: 190 AKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPRAVAEPAVP--RAILDDLLKVTTDIVEA 247 Query: 236 IPEQVRQALREKP 248 P +R L E P Sbjct: 248 FPTALRAGLAEGP 260 >gb|AEO73822.1| hypothetical protein PAM18_1335 [Pseudomonas aeruginosa M18] Length = 280 Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 13/253 (5%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KR DA + AR + PGFNLR E I L ++ +GG VP LEV ++ Sbjct: 5 GDLKRADA-MKARLENLHEEPGFNLR-AEGEDLEQSIADLADYLHQGGIVPALEVRPREE 62 Query: 64 GLGVDVIDGHRRTTADQELLAEG-----LNIE-WIRIEPFEGNDLERQARILTSQDNRKL 117 G G+ V+DGHRR A +L AEG N E W+ I F GND ER R++TSQ+ RKL Sbjct: 63 G-GMWVVDGHRRRRAYLKLDAEGRLPRDQNGEFWVPIVAFAGNDAERVLRVITSQEGRKL 121 Query: 118 LPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTA 177 LELA GY+RL AFG + E+I +G++RQH++Q+L++ A VQ ++ +G AATTA Sbjct: 122 SSLELAHGYKRLIAFGWTVEQIAQKMGRTRQHVDQVLVVGNANTDVQQLISSGAVAATTA 181 Query: 178 IEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAI-RPWTPPARAVLPMVSAVD-AVVLA 235 + VR+HG+ A VLG+ + AAG K+T A+ P P RA+L + ++ +V A Sbjct: 182 AKVVRKHGEKAGQVLGQQLAKVIAAGGTKVTPKAVAEPVVP--RAILEELLKLNREIVTA 239 Query: 236 IPEQVRQALREKP 248 P +R L E P Sbjct: 240 FPTALRAGLAEGP 252 >ref|YP_004124000.1| hypothetical protein Alide_4553 [Alicycliphilus denitrificans BC] gb|ADV02155.1| hypothetical protein Alide_4553 [Alicycliphilus denitrificans BC] Length = 311 Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 103/281 (36%), Positives = 142/281 (50%), Gaps = 11/281 (3%) Query: 6 VKRTDAGLWARPSAIRIL-PGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKDG 64 VK+TD L+ P + PGFN RD P + IE+ G VPPL V + Sbjct: 21 VKKTD--LYKVPPEKLVEEPGFNERDYSDPDVQTQIEAFAQAFAAGRYVPPLVVRIDPIT 78 Query: 65 LGVDVIDGHRRTTADQELLAEGLNIEWIRIEPFEGNDLERQARILTSQDNRKLLPLELAE 124 + V+DGH+R + G I + PF GND +R +LTS + KL P+ +A Sbjct: 79 GDIIVVDGHQRRRGALLAIERGATITHLECLPFRGNDADRVICMLTSSEGLKLKPVGIAR 138 Query: 125 GYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTAIEAVREH 184 GY RL G +EI V K+ QH+E ML+LA A VQ +V G +AT AIE VR+H Sbjct: 139 GYLRLLNMGSDVQEIARSVAKTPQHVESMLVLAEANSDVQALVNKGAVSATMAIEVVRKH 198 Query: 185 GDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARAVLPMVSAVDAVVLAIPE--QVRQ 242 GD A A+LG QEA A G+ K+ +AI+ W PP + +V + + I + +V+Q Sbjct: 199 GDKAGAILGSKLQEANARGQTKVKPSAIKDWAPPRALATKLYHSVGSALGQITQSSEVQQ 258 Query: 243 ALR--EKPVEDA----TIELPAAVFYELLAQQESIRALRTK 277 L E DA T+ + AA EL+ + RTK Sbjct: 259 LLADLEANGSDAAAGKTVPVNAAALIELMRLFKETEEARTK 299 >ref|YP_001039693.1| ParB-like nuclease domain [Burkholderia ambifaria phage BcepF1] gb|ABL96740.1| ParB-like nuclease domain [Burkholderia ambifaria phage BcepF1] Length = 342 Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 104/304 (34%), Positives = 153/304 (50%), Gaps = 32/304 (10%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLR----DTEAPGYR---DDIESLKNHKRRGGKVPPL 56 G VKR D + R + + GFNLR E + D E+L + GG++PPL Sbjct: 18 GEVKRADM-MKCRLEDLYVEEGFNLRTPFDQLEGEALQEVLDADEALYEFIKAGGQIPPL 76 Query: 57 EVSLSKDGLGVDVIDGHRRTTADQELLAEGLNIE--------------WIRIEPFEGNDL 102 EV +G GV V++GHRR AEG+ + W++IE F G+D Sbjct: 77 EVRPRAEG-GVWVVEGHRRRRVLMRCDAEGVPLRDGKPVPGGDPRGELWVKIESFTGDDA 135 Query: 103 ERQARILTSQDNRKLLPLELAEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHA 162 +R++RILTSQDN KL +E+A GY L FG + E I NL K+ QH+ Q L++A A Sbjct: 136 DRKSRILTSQDNLKLHAVEIANGYLELSKFGWTNERIANLRKKTPQHVAQYLIVAGADTY 195 Query: 163 VQMMVRAGETAATTAIEAVREHGDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARAV 222 V+ +R + A T A++ VR+HGDGAA + + + + AG KK+T A I P + V Sbjct: 196 VKWAIRNDKIAFTEAVKIVRKHGDGAAQFI---KDKLSGAG-KKLTAATIGSKNLPKKIV 251 Query: 223 ----LPMVSAVDAVVLAIPEQV-RQALREKPVEDATIELPAAVFYELLAQQESIRALRTK 277 + +D + E + + AL + D +E+ A ELL +I+ R K Sbjct: 252 DEVEASTIFVIDNLTAEASEAIAKAALSPEQFADEIVEIRAGDLAELLKAVNAIKEERAK 311 Query: 278 AEQK 281 +K Sbjct: 312 QAEK 315 >ref|YP_001177341.1| hypothetical protein Ent638_2623 [Enterobacter sp. 638] gb|ABP61290.1| hypothetical protein Ent638_2623 [Enterobacter sp. 638] Length = 344 Score = 132 bits (331), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 3/212 (1%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLRDTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSKD 63 G +KRTD G++ + I + GFN R+ + + D + L N+ GG VPPLEV+ + Sbjct: 12 GSIKRTDTGMFIDLADIHVREGFNKREDDDRTRQAD-DDLFNYLMNGGSVPPLEVTARDE 70 Query: 64 GLGVDVIDGHRRTTADQELLAEGLNIEWIRIEPFEGNDLERQARILTSQDNRKLLPLELA 123 G GV V++GHRR G ++ I I PF GND++R ARI+TS + L +E A Sbjct: 71 G-GVWVVEGHRRRRCFARCAEAGKPVDRIHIMPFNGNDVQRLARIMTSNNQLPLSDMEQA 129 Query: 124 EGYRRL-KAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTAIEAVR 182 + L AF + EI LV KS +E++LLL+ A H VQ V++G + A++ VR Sbjct: 130 AVIQELHNAFNQTTSEIAKLVNKSVATVEKLLLLSTANHDVQREVKSGAVSVDVAVDRVR 189 Query: 183 EHGDGAAAVLGEARQEAAAAGKKKITTAAIRP 214 E+G+ A VL + AAA GK K+T ++I P Sbjct: 190 EYGEDAGKVLQHDKAVAAAQGKTKVTRSSIAP 221 >ref|YP_003296531.1| hypothetical protein ETAE_2485 [Edwardsiella tarda EIB202] gb|ACY85320.1| hypothetical protein ETAE_2485 [Edwardsiella tarda EIB202] Length = 267 Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 86/219 (39%), Positives = 122/219 (55%), Gaps = 4/219 (1%) Query: 4 GVVKRTDAGLWARPSAIRILPGFNLR-DTEAPGYRDDIESLKNHKRRGGKVPPLEVSLSK 62 G + R D+G++ I + GFN R D E DD L GG VPPLEV Sbjct: 13 GPISRRDSGMFISLDNIHVQEGFNKRIDDERTQQADD--DLFQFLFSGGTVPPLEVRPRD 70 Query: 63 DGLGVDVIDGHRRTTADQELLAEGLNIEWIRIEPFEGNDLERQARILTSQDNRKLLPLEL 122 +G GV V++GHRR A + + G IE I I PF G+D+ER ARI+TS + L E Sbjct: 71 EG-GVWVVEGHRRIRAYRRVREAGKPIELIAIAPFTGSDVERVARIMTSNNQLPLTQFEQ 129 Query: 123 AEGYRRLKAFGLSKEEIGNLVGKSRQHIEQMLLLAAAPHAVQMMVRAGETAATTAIEAVR 182 + + L AF L+ +EI L+ KSR ++++L+L+A+ + VQ +V+ GE A A++ V+ Sbjct: 130 SLVVKELAAFNLTPDEIAKLIHKSRATVDKLLILSASNYDVQQLVKDGEVAMDVAVDRVK 189 Query: 183 EHGDGAAAVLGEARQEAAAAGKKKITTAAIRPWTPPARA 221 EHG+ A VL E + A A GKKK+T + RA Sbjct: 190 EHGESAGDVLQEDVKRAKAQGKKKVTRSVTGSQFSATRA 228