BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0012.p (131 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776630.1| hypothetical protein Hsero_3241 [Herbaspiril... 120 7e-26 ref|YP_586813.1| thiosulfate:quinone oxidoreductase (TQO) small ... 101 3e-20 ref|YP_003591790.1| DoxX family protein [Caulobacter segnis ATCC... 101 4e-20 ref|ZP_08209679.1| hypothetical protein Y88_0108 [Novosphingobiu... 100 1e-19 ref|NP_422051.1| hypothetical protein CC_3257 [Caulobacter cresc... 99 2e-19 ref|YP_001352617.1| hypothetical protein mma_0927 [Janthinobacte... 98 3e-19 ref|YP_001682384.1| DoxX family protein [Caulobacter sp. K31] >g... 97 7e-19 ref|XP_002538167.1| conserved hypothetical protein [Ricinus comm... 93 1e-17 ref|ZP_08406907.1| hypothetical protein HGR_13574 [Hylemonella g... 86 1e-15 ref|ZP_01302852.1| hypothetical protein SKA58_04150 [Sphingomona... 86 2e-15 >ref|YP_003776630.1| hypothetical protein Hsero_3241 [Herbaspirillum seropedicae SmR1] gb|ADJ64722.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 156 Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 58/60 (96%), Positives = 59/60 (98%) Query: 9 IFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLLLVLGLFTR 68 IFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLAT AEHFFPLLL+LGLFTR Sbjct: 45 IFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATYAEHFFPLLLILGLFTR 104 >ref|YP_586813.1| thiosulfate:quinone oxidoreductase (TQO) small subunit(DoxD domain) [Cupriavidus metallidurans CH34] gb|ABF11544.1| thiosulphate:quinone oxidoreductase (TQO) small subunit(DoxD domain) [Cupriavidus metallidurans CH34] Length = 156 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 47/61 (77%), Positives = 54/61 (88%) Query: 8 AIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLLLVLGLFT 67 ++FFLSGRTKV+G L IKDSTY LF++EY LPL+PPELAAHLA AEH FP+LLVLGLFT Sbjct: 44 SVFFLSGRTKVTGLLTIKDSTYSLFEQEYNLPLIPPELAAHLAAYAEHLFPVLLVLGLFT 103 Query: 68 R 68 R Sbjct: 104 R 104 >ref|YP_003591790.1| DoxX family protein [Caulobacter segnis ATCC 21756] gb|ADG09172.1| DoxX family protein [Caulobacter segnis ATCC 21756] Length = 150 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 56/68 (82%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLL 60 VAR+ VA++FFLSGRTKV G L I D TY LF+ EY +PLLPPE+AAH+AT +EH F +L Sbjct: 31 VARLGVASVFFLSGRTKVDGILHITDGTYALFESEYNVPLLPPEIAAHVATYSEHLFSIL 90 Query: 61 LVLGLFTR 68 LVLGLFTR Sbjct: 91 LVLGLFTR 98 >ref|ZP_08209679.1| hypothetical protein Y88_0108 [Novosphingobium nitrogenifigens DSM 19370] gb|EGD58056.1| hypothetical protein Y88_0108 [Novosphingobium nitrogenifigens DSM 19370] Length = 148 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/68 (69%), Positives = 56/68 (82%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLL 60 VAR+ +A+IFFLSGRTKVSG L I DS Y LF+ +YRLP LPP +AAH+AT +EH FP+L Sbjct: 27 VARLGIASIFFLSGRTKVSGLLTITDSAYYLFETDYRLPFLPPHVAAHIATYSEHLFPIL 86 Query: 61 LVLGLFTR 68 LVLGL TR Sbjct: 87 LVLGLGTR 94 >ref|NP_422051.1| hypothetical protein CC_3257 [Caulobacter crescentus CB15] ref|YP_002518739.1| DoxX family protein [Caulobacter crescentus NA1000] gb|AAK25219.1| conserved hypothetical protein [Caulobacter crescentus CB15] gb|ACL96831.1| DoxX family protein [Caulobacter crescentus NA1000] Length = 150 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/72 (68%), Positives = 56/72 (77%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLL 60 VAR+ VAAIFF SGRTKV G L I D TY LF+ EY LPL+PP+LAAH AT +EH F +L Sbjct: 31 VARLGVAAIFFQSGRTKVDGLLHITDGTYALFETEYALPLIPPDLAAHAATYSEHLFSIL 90 Query: 61 LVLGLFTRRTLL 72 LVLGLFTR + L Sbjct: 91 LVLGLFTRMSAL 102 >ref|YP_001352617.1| hypothetical protein mma_0927 [Janthinobacterium sp. Marseille] gb|ABR91395.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 156 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 44/68 (64%), Positives = 55/68 (80%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLL 60 V R +A+IFFLSGRTKV+G L + DSTY LF +Y+LPL+PP++AAHL T +EH FP+L Sbjct: 37 VMRFGIASIFFLSGRTKVTGILTLTDSTYSLFSTDYKLPLVPPDIAAHLGTYSEHLFPIL 96 Query: 61 LVLGLFTR 68 LV GLFTR Sbjct: 97 LVFGLFTR 104 >ref|YP_001682384.1| DoxX family protein [Caulobacter sp. K31] gb|ABZ69886.1| DoxX family protein [Caulobacter sp. K31] Length = 154 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 46/72 (63%), Positives = 57/72 (79%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLL 60 VAR+ +A++FFLSGRTKV G L I D TY LF ++Y LPL+P +LAAHLAT +EH F +L Sbjct: 35 VARLGIASVFFLSGRTKVDGILHITDGTYSLFADDYALPLIPSDLAAHLATYSEHLFSIL 94 Query: 61 LVLGLFTRRTLL 72 LVLGLFTR + L Sbjct: 95 LVLGLFTRLSAL 106 >ref|XP_002538167.1| conserved hypothetical protein [Ricinus communis] gb|EEF24216.1| conserved hypothetical protein [Ricinus communis] Length = 148 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 42/56 (75%), Positives = 49/56 (87%) Query: 13 SGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLLLVLGLFTR 68 SGRTKV+G L + D TY LF+EEYRLPL+PPE+AAH+A AEHFFPLLL+LGLFTR Sbjct: 41 SGRTKVTGLLTLTDGTYQLFREEYRLPLVPPEIAAHMAAYAEHFFPLLLILGLFTR 96 >ref|ZP_08406907.1| hypothetical protein HGR_13574 [Hylemonella gracilis ATCC 19624] gb|EGI75950.1| hypothetical protein HGR_13574 [Hylemonella gracilis ATCC 19624] Length = 182 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 41/55 (74%), Positives = 46/55 (83%) Query: 1 VARVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEH 55 ARVA+A IFFLSGRTKV+G L + + TY LF+EEYRLPLLPPELAAHLA AEH Sbjct: 63 TARVAMATIFFLSGRTKVTGLLTVTEGTYALFREEYRLPLLPPELAAHLAAYAEH 117 >ref|ZP_01302852.1| hypothetical protein SKA58_04150 [Sphingomonas sp. SKA58] gb|EAT09476.1| hypothetical protein SKA58_04150 [Sphingomonas sp. SKA58] Length = 155 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/70 (62%), Positives = 52/70 (74%) Query: 3 RVAVAAIFFLSGRTKVSGFLDIKDSTYILFQEEYRLPLLPPELAAHLATCAEHFFPLLLV 62 R+ A IFFLSGRTKV G + I DSTY LF+ EY LPL+ PELAA +AT +EH FPLLL+ Sbjct: 29 RLGSAVIFFLSGRTKVEGVITIADSTYELFRTEYALPLISPELAATVATWSEHVFPLLLI 88 Query: 63 LGLFTRRTLL 72 GL TR + L Sbjct: 89 AGLGTRLSAL 98