BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0031.p (216 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774273.1| hypothetical protein Hsero_0847 [Herbaspiril... 428 e-118 ref|YP_004445553.1| hypothetical protein Halhy_0773 [Haliscomeno... 190 1e-46 ref|YP_001632117.1| hypothetical protein Bpet3506 [Bordetella pe... 180 1e-43 ref|YP_001546381.1| hypothetical protein Haur_3617 [Herpetosipho... 176 2e-42 ref|ZP_08486493.1| hypothetical protein MetalDRAFT_3218 [Methylo... 175 5e-42 ref|ZP_05784949.1| conserved hypothetical protein [Silicibacter ... 172 2e-41 ref|YP_004354827.1| hypothetical protein PSEBR_a3487 [Pseudomona... 172 3e-41 ref|YP_003683546.1| hypothetical protein Mesil_0093 [Meiothermus... 172 4e-41 ref|YP_285736.1| hypothetical protein Daro_2533 [Dechloromonas a... 171 7e-41 ref|ZP_05125326.1| conserved hypothetical protein [Rhodobacterac... 164 7e-39 >ref|YP_003774273.1| hypothetical protein Hsero_0847 [Herbaspirillum seropedicae SmR1] gb|ADJ62365.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 216 Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/216 (99%), Positives = 216/216 (100%) Query: 1 MSTIGLHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY 60 MSTIGLHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY Sbjct: 1 MSTIGLHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFY 60 Query: 61 LEVITIDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMS 120 LEVITIDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPG+IEPMS Sbjct: 61 LEVITIDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGMIEPMS 120 Query: 121 RGALDWLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQA 180 RGALDWLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQA Sbjct: 121 RGALDWLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQA 180 Query: 181 AWQAIGLADARIVLKEGKQASLRAVVSTPHGERVMG 216 AWQAIGLADARIVLKEGKQASLRAVVSTPHGERV+G Sbjct: 181 AWQAIGLADARIVLKEGKQASLRAVVSTPHGERVVG 216 >ref|YP_004445553.1| hypothetical protein Halhy_0773 [Haliscomenobacter hydrossis DSM 1100] gb|AEE48680.1| hypothetical protein Halhy_0773 [Haliscomenobacter hydrossis DSM 1100] Length = 218 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 105/212 (49%), Positives = 133/212 (62%), Gaps = 4/212 (1%) Query: 6 LHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVIT 65 +HT DHLVITAPTL+ G+ ++++ LG P+ GG H R+GTHNALL LG+ YLEVI Sbjct: 6 VHTTLDHLVITAPTLEVGINYLQETLGA--MPQPGGIHPRMGTHNALLKLGDSCYLEVIA 63 Query: 66 IDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALD 125 I P+ R RWF +D+L A+PRL WVART+DI A A +P G IEPMSRG L Sbjct: 64 IKPDEPQAERSRWFDLDKLEADALPRLRTWVARTNDITKAQALAPAWFGNIEPMSRGDLS 123 Query: 126 WLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAI 185 WLI+I ADG+L G+ PSLIQWL+ PHPAT L D C L ++ HP A Q+ + I Sbjct: 124 WLISIPADGSLPLGGICPSLIQWLNAPHPATKLSDVSCALLRVEAYHPLAAQVNETLERI 183 Query: 186 GLADARIV--LKEGKQASLRAVVSTPHGERVM 215 G A V L ++ L A + TP G R + Sbjct: 184 GFEGAFSVSPLHPSEKPYLLAYIQTPSGVRKL 215 >ref|YP_001632117.1| hypothetical protein Bpet3506 [Bordetella petrii DSM 12804] emb|CAP43849.1| Conserved hypothetical protein [Bordetella petrii] Length = 212 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 108/207 (52%), Positives = 130/207 (62%), Gaps = 5/207 (2%) Query: 11 DHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DH+ +TAP+L G ++E LGV P+ GG H R+GTHN LL LGE YLEVI DP A Sbjct: 6 DHIAVTAPSLAIGADFIEHALGVR--PQPGGAHPRMGTHNLLLRLGESVYLEVIACDPAA 63 Query: 71 DAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALDWLITI 130 AP RPRWF +D+L A PRLA WVART DIAAAV A + G IEPM+RG L W ITI Sbjct: 64 PAPQRPRWFELDRLAPDAPPRLATWVARTDDIAAAVQAC-AAAGQIEPMTRGELSWRITI 122 Query: 131 AADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAIGLADA 190 ADG+L G P+LIQW + PHPAT L D GC L+ L + HP Q ++A AI A Sbjct: 123 PADGSLPAAGAAPTLIQWDALPHPATKLDDLGCHLEALQVFHPDPQGIRATLDAIAFAGP 182 Query: 191 RIV--LKEGKQASLRAVVSTPHGERVM 215 V L G L+A + TP G R++ Sbjct: 183 VEVRALPAGAAPRLQARIRTPRGLRML 209 >ref|YP_001546381.1| hypothetical protein Haur_3617 [Herpetosiphon aurantiacus DSM 785] gb|ABX06253.1| conserved hypothetical protein [Herpetosiphon aurantiacus DSM 785] Length = 215 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 101/203 (49%), Positives = 121/203 (59%), Gaps = 3/203 (1%) Query: 11 DHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DHLV+TAP L G+A++E LGV M + GGQH + THN LL LGE YLEVI DP Sbjct: 9 DHLVVTAPDLALGVAYIEDLLGVPM--QAGGQHQAMATHNCLLKLGEHCYLEVIAPDPTL 66 Query: 71 DAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALDWLITI 130 AP RPRWF +D L + PRLA WVA+T I AA GV+ PM RG L W ITI Sbjct: 67 AAPDRPRWFALDSLQPTSAPRLATWVAQTILIQAASELLHQQLGVVTPMRRGDLAWQITI 126 Query: 131 AADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAIGLADA 190 ADG+L GV P LI+W + HP L D+GCRL QL L HP A Q++ IG+ D Sbjct: 127 PADGSLPFAGVAPMLIEWPREQHPIQRLTDQGCRLLQLELHHPQASQIEIMLSQIGMKDV 186 Query: 191 RIVLKEGKQASLRAVVSTPHGER 213 I + Q L A ++TP G R Sbjct: 187 -IRWQTAAQPQLIATIATPSGIR 208 >ref|ZP_08486493.1| hypothetical protein MetalDRAFT_3218 [Methylomicrobium album BG8] gb|EGL02580.1| hypothetical protein MetalDRAFT_3218 [Methylomicrobium album BG8] Length = 216 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 108/213 (50%), Positives = 135/213 (63%), Gaps = 4/213 (1%) Query: 6 LHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVIT 65 L + DH+ +TAP+L++G A++ + LG S+ GG H R+GTHN LL LGE YLEVI Sbjct: 2 LRSYIDHIAVTAPSLETGEAYIRRTLGTSL--ETGGAHPRMGTHNRLLKLGEMRYLEVIA 59 Query: 66 IDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALD 125 IDP A P RPRWF +D A RLA W+ART+DIAAA ASP S G IEPM RG+L+ Sbjct: 60 IDPAAPPPDRPRWFRLDAPDPARPARLAAWIARTNDIAAAAKASPFSLGGIEPMRRGSLN 119 Query: 126 WLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAI 185 WLIT+ ADG L GV P+LIQW HPA ALPD GC L +L HP A +++ A+ Sbjct: 120 WLITLPADGGLPLQGVAPALIQWPEGIHPAAALPDSGCALVRLEGFHPEAGKVRRVLDAV 179 Query: 186 GLADARIV--LKEGKQASLRAVVSTPHGERVMG 216 G D V L+ G+ L A + TP G R +G Sbjct: 180 GFEDDFRVFELEPGRPPYLVAHIRTPAGMRQLG 212 >ref|ZP_05784949.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] gb|EEX08065.1| conserved hypothetical protein [Silicibacter lacuscaerulensis ITI-1157] Length = 200 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/205 (46%), Positives = 125/205 (60%), Gaps = 9/205 (4%) Query: 11 DHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DHL + A TL+ +A VEQ LGV MAP GG+H GTHN LL L EG YLE I IDP A Sbjct: 4 DHLAVAAATLEEAVAHVEQALGVQMAP--GGKHAAFGTHNYLLGLDEGLYLEAIAIDPQA 61 Query: 71 DAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALDWLITI 130 PGRPRWF +D+ A P+L++W+ R SD+ A + A P+ G ++ + RGAL W + + Sbjct: 62 PDPGRPRWFDLDRF--AGPPKLSNWICRVSDLLADLDAFPVDVGQVDDLERGALRWKMAV 119 Query: 131 AADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAIGLADA 190 G L D + P+LIQW HPA L GCRL++L++ HP A + + +G D Sbjct: 120 PETGRLPFDNLFPALIQWQGDLHPAGMLQASGCRLRRLVIFHPDALTMA---RLLGQMD- 175 Query: 191 RIVLKEGKQASLRAVVSTPHGERVM 215 R+V G A+LRA TPHG RV+ Sbjct: 176 RVVFDTGA-AALRAEFDTPHGLRVL 199 >ref|YP_004354827.1| hypothetical protein PSEBR_a3487 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69823.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 215 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 4/212 (1%) Query: 6 LHTAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVIT 65 + T DHLVI A L +G A+V LGV++ P GG H R+GTHN LL LG G YLEVI Sbjct: 1 MKTTLDHLVIVATDLDTGCAFVTDALGVALQP--GGVHSRMGTHNRLLHLGPGLYLEVIA 58 Query: 66 IDPNADAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALD 125 +DP+A P R RWFG+DQL + RLA WVART DI AA A P G +EPM+RG L+ Sbjct: 59 VDPSAIRPDRARWFGLDQLAPHSPARLATWVARTDDIHAARDACPDLVGDVEPMTRGTLN 118 Query: 126 WLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAI 185 W ITI DG+L G +P+LIQW PHPA L D+GC L L + H ++++A A+ Sbjct: 119 WQITIPTDGSLPMAGSVPTLIQWAPGPHPADMLQDKGCTLLALDVFHTDPEKIKAILTAM 178 Query: 186 GLADARIV--LKEGKQASLRAVVSTPHGERVM 215 + + L+ L A + TP+G + + Sbjct: 179 NFSGPVHLHALQAPSAPYLVAHIQTPNGLKTL 210 >ref|YP_003683546.1| hypothetical protein Mesil_0093 [Meiothermus silvanus DSM 9946] gb|ADH62038.1| conserved hypothetical protein [Meiothermus silvanus DSM 9946] Length = 216 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 100/212 (47%), Positives = 126/212 (59%), Gaps = 8/212 (3%) Query: 8 TAPDHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITID 67 T DHLV+ A TL+ G A++E+ LGV+M+P GGQH ++GTHN LL+LG G YLEV+ ID Sbjct: 8 TVLDHLVVAARTLEEGAAYIERMLGVAMSP--GGQHPQMGTHNRLLNLGGGVYLEVLAID 65 Query: 68 PNADAPGRPRWFGMD----QLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGA 123 P P RPRWFG+D Q A P L HWVART DI + P G + M RG Sbjct: 66 PQGIPPDRPRWFGLDSPALQQRLEAGPALIHWVARTDDIHRVLQRVP-RLGRVHRMHRGD 124 Query: 124 LDWLITIAADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQ 183 L W ITI DG L G++PSLI W PHP T LPD GC+L L HP +Q+ Sbjct: 125 LSWDITIPDDGNLLEGGLIPSLICWGETPHPTTRLPDVGCQLVGLYGVHPEPRQVSRMLA 184 Query: 184 AIGLADARIVLKEGKQASLRAVVSTPHGERVM 215 +GL + + L+EG+Q L A + P G V+ Sbjct: 185 ELGL-EGVLELREGEQVRLEAWIEAPKGRWVL 215 >ref|YP_285736.1| hypothetical protein Daro_2533 [Dechloromonas aromatica RCB] gb|AAZ47266.1| conserved hypothetical protein [Dechloromonas aromatica RCB] Length = 239 Score = 171 bits (433), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 129/207 (62%), Gaps = 4/207 (1%) Query: 11 DHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DH+ +TA +L +G A+V + LGV P++GG+H R+ THN LL LG+ +LEVI +P Sbjct: 7 DHITVTAFSLDAGAAFVLETLGV--FPQVGGEHPRMATHNLLLRLGDSTFLEVIAPNPAV 64 Query: 71 DAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALDWLITI 130 A RPRWF +D + + P L+ WV RTSDI A VAAS G +EPMSRGAL+W ITI Sbjct: 65 PAASRPRWFALDSIGSQSPPSLSTWVVRTSDIRATVAASSEPLGNVEPMSRGALNWFITI 124 Query: 131 AADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAIGLADA 190 ADG++ DG+ P+LI+W + HPA L D+G L +L + HP ++ ++ L Sbjct: 125 PADGSVPLDGIAPALIEWHTDVHPAAKLEDKGLSLVKLEIMHPNPDRVSRLLSSLELDAP 184 Query: 191 RIVLK--EGKQASLRAVVSTPHGERVM 215 VL G+ A L A ++TP G R++ Sbjct: 185 VSVLSAPSGESARLVAHINTPQGLRLL 211 >ref|ZP_05125326.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gb|EEE35261.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 210 Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 9/207 (4%) Query: 11 DHLVITAPTLKSGMAWVEQCLGVSMAPRIGGQHVRLGTHNALLSLGEGFYLEVITIDPNA 70 DH+ + A +L+ G +++ LG+ M GG H+R+GTHN L+SLG+ +LE+I IDP+A Sbjct: 10 DHITVVAQSLEEGCTYIKDALGIDMPD--GGAHLRMGTHNKLMSLGDDVFLELIAIDPDA 67 Query: 71 DAPGRPRWFGMDQLTKAAVPRLAHWVARTSDIAAAVAASPISPGVIEPMSRGALDWLITI 130 AP RPRWF +D PRL WV T DI A +A P G ++RG L WLI+I Sbjct: 68 SAPDRPRWFNLDAFDDD--PRLGTWVVGTDDIDATLAQLPPISGPANEITRGDLTWLISI 125 Query: 131 AADGALACDGVMPSLIQWLSQPHPATALPDRGCRLQQLLLEHPAAQQLQAAWQAIG--LA 188 DG + G P+LI+W +PHPA+ + D GCRL L +EHP A +Q IG + Sbjct: 126 PDDGTMPLGGACPTLIEWPDRPHPASRMTDLGCRLTSLTIEHPEAGTIQG---LIGDRID 182 Query: 189 DARIVLKEGKQASLRAVVSTPHGERVM 215 I + +G ++A + TP G R + Sbjct: 183 SDFITITDGPGMKIKASIQTPSGTREL 209