BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0029.p (307 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774275.1| site specific integrase/recombinase [Herbasp... 628 e-178 ref|YP_004754211.1| site-specific tyrosine recombinase [Collimon... 490 e-136 ref|YP_001352164.1| integrase/recombinase [Janthinobacterium sp.... 483 e-134 ref|YP_001098767.1| site-specific tyrosine recombinase [Herminii... 478 e-133 ref|ZP_08274277.1| site-specific tyrosine recombinase [Oxalobact... 477 e-132 ref|YP_003751581.1| site-specific tyrosine recombinase [Ralstoni... 433 e-119 ref|ZP_04579503.1| tyrosine recombinase XerD [Oxalobacter formig... 429 e-118 ref|ZP_04577354.1| tyrosine recombinase XerD [Oxalobacter formig... 429 e-118 ref|ZP_00946119.1| Integrase/recombinase (XerD/RipX family) [Ral... 429 e-118 ref|YP_001021215.1| tyrosine recombinase XerD subunit [Methylibi... 427 e-118 >ref|YP_003774275.1| site specific integrase/recombinase [Herbaspirillum seropedicae SmR1] gb|ADJ62367.1| site specific integrase/recombinase protein [Herbaspirillum seropedicae SmR1] Length = 307 Score = 628 bits (1619), Expect = e-178, Method: Compositional matrix adjust. Identities = 306/307 (99%), Positives = 306/307 (99%) Query: 1 MGRTTPKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALYE 60 MGRTTPKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMT YAHWLYQERAKALYE Sbjct: 1 MGRTTPKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTRYAHWLYQERAKALYE 60 Query: 61 TQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFP 120 TQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFP Sbjct: 61 TQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFP 120 Query: 121 KTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVT 180 KTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVT Sbjct: 121 KTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVT 180 Query: 181 GKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKY 240 GKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKY Sbjct: 181 GKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKY 240 Query: 241 ALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLH 300 ALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLH Sbjct: 241 ALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLH 300 Query: 301 AAHHPRG 307 AAHHPRG Sbjct: 301 AAHHPRG 307 >ref|YP_004754211.1| site-specific tyrosine recombinase [Collimonas fungivorans Ter331] gb|AEK63388.1| site-specific tyrosine recombinase [Collimonas fungivorans Ter331] Length = 312 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 242/312 (77%), Positives = 272/312 (87%), Gaps = 5/312 (1%) Query: 1 MGRTTPKIEA-PAVSRE---AIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLY-QERA 55 M R+ + EA PA+S E AIDEFCD+LWLEDGL+KN+LEAYRRDMTL+A WL Q Sbjct: 1 MRRSKAQSEAKPALSAEHQTAIDEFCDNLWLEDGLAKNSLEAYRRDMTLFALWLQEQPDG 60 Query: 56 KALYETQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQ 115 K+L+ A DLNAYF ARHD +K +SSNRRLAVLKRF+ LALRQ+ ++ADPCL LRSA+Q Sbjct: 61 KSLFAVHAGDLNAYFLARHDSSKATSSNRRLAVLKRFYLLALRQNRISADPCLHLRSAKQ 120 Query: 116 PQRFPKTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEG 175 RFPK LSE QVEALLAAPDV+TPLGLRDR M+ELMYASGLRVSELVLLKS+EVGMNEG Sbjct: 121 APRFPKILSEIQVEALLAAPDVATPLGLRDRTMLELMYASGLRVSELVLLKSLEVGMNEG 180 Query: 176 VLRVTGKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWT 235 VLR+TGKG+KTRL+PFGEEA +W++RYL +AR QI+ GQ+DDALFVTARGG MTRQMFWT Sbjct: 181 VLRITGKGNKTRLLPFGEEARNWIVRYLKDARGQIMNGQMDDALFVTARGGAMTRQMFWT 240 Query: 236 LIKKYALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARER 295 LIKKYA +A + A LSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARER Sbjct: 241 LIKKYAAKAAINAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARER 300 Query: 296 LKQLHAAHHPRG 307 LK LHAAHHPRG Sbjct: 301 LKALHAAHHPRG 312 >ref|YP_001352164.1| integrase/recombinase [Janthinobacterium sp. Marseille] gb|ABR89571.1| integrase/recombinase [Janthinobacterium sp. Marseille] Length = 301 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 230/295 (77%), Positives = 257/295 (87%) Query: 13 VSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALYETQAEDLNAYFAA 72 +S+ IDEFCD+LWLEDGL+KN+LEAYRRD+ L+A WL QER K+L EDLN YF A Sbjct: 7 LSQSEIDEFCDTLWLEDGLAKNSLEAYRRDLRLFATWLQQERGKSLLAAHTEDLNGYFFA 66 Query: 73 RHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEALL 132 +H TK +SSNRRLAVLKRF+QLALRQ+ + DPCL+LRSA+QP R PKTLSE QVEALL Sbjct: 67 KHATTKATSSNRRLAVLKRFYQLALRQNKIKDDPCLRLRSAKQPPRMPKTLSEAQVEALL 126 Query: 133 AAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTRLVPFG 192 AAPDV+TPLGLRDR M+ELMYASGLRV+ELVLLKS+EVGMNEGVLRVTGKG KTRL+PFG Sbjct: 127 AAPDVNTPLGLRDRTMLELMYASGLRVTELVLLKSVEVGMNEGVLRVTGKGGKTRLIPFG 186 Query: 193 EEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVTARLSP 252 EEA +W+ RYL EAR IL GQ+DDALFVTARGG MTRQMFWTLIKK+A A + A LSP Sbjct: 187 EEARAWIERYLKEARGAILNGQMDDALFVTARGGAMTRQMFWTLIKKHAAAADINAPLSP 246 Query: 253 HTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 HTLRHAFATHLLNHGADLRVVQLLLGH+DISTTQIYTHVARERLK+LH HHPRG Sbjct: 247 HTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKRLHQMHHPRG 301 >ref|YP_001098767.1| site-specific tyrosine recombinase [Herminiimonas arsenicoxydans] emb|CAL60638.1| tyrosine recombinase XerD [Herminiimonas arsenicoxydans] Length = 309 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/294 (77%), Positives = 255/294 (86%) Query: 14 SREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALYETQAEDLNAYFAAR 73 S+ IDEFCD+LWLEDGL+KN+LEAYRRD+ L+A WL ER K L A+D+NAYF AR Sbjct: 16 SQAQIDEFCDTLWLEDGLAKNSLEAYRRDLRLFAVWLQAERGKTLLAAHADDVNAYFFAR 75 Query: 74 HDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEALLA 133 H+ TK +SSNRRLAVLKRF+QLALRQ+ ++ DPCLK+RSA+QP R PKTLSE QVEALLA Sbjct: 76 HEVTKATSSNRRLAVLKRFYQLALRQNRISDDPCLKMRSAKQPLRIPKTLSEAQVEALLA 135 Query: 134 APDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTRLVPFGE 193 APDV+TPLGLRDR M+ELMYASGLRV+ELVLLKSIEVGMNEGVLR+TGKG KTRLVPFGE Sbjct: 136 APDVTTPLGLRDRTMLELMYASGLRVTELVLLKSIEVGMNEGVLRITGKGGKTRLVPFGE 195 Query: 194 EAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVTARLSPH 253 EA W+ RYL EAR IL GQ+DDALFVTARG MTRQMFWTLIKK+A A + A LSPH Sbjct: 196 EARVWIERYLKEARPLILDGQIDDALFVTARGAAMTRQMFWTLIKKHAAAAEINAPLSPH 255 Query: 254 TLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 TLRHAFATHLLNHGADLRVVQ+LLGH+DISTTQIYTHVARERLK LH HHPRG Sbjct: 256 TLRHAFATHLLNHGADLRVVQMLLGHSDISTTQIYTHVARERLKHLHQIHHPRG 309 >ref|ZP_08274277.1| site-specific tyrosine recombinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32250.1| site-specific tyrosine recombinase [Oxalobacteraceae bacterium IMCC9480] Length = 304 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 228/296 (77%), Positives = 257/296 (86%) Query: 12 AVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALYETQAEDLNAYFA 71 A SR+ ID FCD+LWLEDGL+KN+LEAYRRD+T +A WL Q L D+NAYFA Sbjct: 9 ADSRQHIDTFCDTLWLEDGLAKNSLEAYRRDLTAFALWLAQASQTGLLAVTGADINAYFA 68 Query: 72 ARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEAL 131 ARHD +K +++NRRLAVLKRF+QLALR ++ DPCLKL SA+QP RFPKTLSE VEAL Sbjct: 69 ARHDASKATTANRRLAVLKRFYQLALRNKQISDDPCLKLHSAKQPPRFPKTLSEANVEAL 128 Query: 132 LAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTRLVPF 191 LAAPDVSTPLGLRDR M+ELMYASGLRV+ELVLLKSIE+ +N+GV+RVTGKG+KTRLVPF Sbjct: 129 LAAPDVSTPLGLRDRTMLELMYASGLRVTELVLLKSIELSLNDGVVRVTGKGNKTRLVPF 188 Query: 192 GEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVTARLS 251 GEEA SW+ RYL EARAQIL GQ+DDALFVTARGGPMTRQMFW ++KK A++A + A LS Sbjct: 189 GEEARSWIERYLLEARAQILDGQMDDALFVTARGGPMTRQMFWVVVKKCAVRADIHAPLS 248 Query: 252 PHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 PHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLK LHAAHHPRG Sbjct: 249 PHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKVLHAAHHPRG 304 >ref|YP_003751581.1| site-specific tyrosine recombinase [Ralstonia solanacearum PSI07] emb|CBJ50282.1| site-specific tyrosine recombinase [Ralstonia solanacearum PSI07] emb|CCA79677.1| site-specific tyrosine recombinase [blood disease bacterium R229] Length = 308 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/309 (69%), Positives = 252/309 (81%), Gaps = 3/309 (0%) Query: 1 MGRTTPKIEAPA-VSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALY 59 M + P++ APA +S E I FCD+LWLEDGL++NTL+AYRRD+TLYA WL ER KA+ Sbjct: 1 MTKAAPEVLAPARLSAETIQRFCDALWLEDGLARNTLDAYRRDLTLYAQWL-AERGKAID 59 Query: 60 ETQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRF 119 +T+ DL YFAARH +++ SS+NRR V KRFFQ ALR+H ++ADP L +A+QP R Sbjct: 60 QTEDGDLADYFAARHAESRASSANRRRTVFKRFFQWALREHVISADPSRLLSTAKQPPRI 119 Query: 120 PKTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRV 179 PKTLSE QVEAL+AAPD+ TPLGLRDRAMIELMYASGLRVSE+V LK++EVG+NEGV+RV Sbjct: 120 PKTLSEAQVEALIAAPDIDTPLGLRDRAMIELMYASGLRVSEIVALKTVEVGLNEGVVRV 179 Query: 180 -TGKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIK 238 +GKG K RLVPFG EAG WL RYL + R +L + DALFVTARG MTRQ FW LIK Sbjct: 180 VSGKGGKDRLVPFGAEAGDWLRRYLRDGRTALLGERTADALFVTARGDGMTRQAFWHLIK 239 Query: 239 KYALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQ 298 +YAL+A + A LSPHTLRHAFATHLLNHGADLRVVQ+LLGHADISTTQIYTHVARERL+ Sbjct: 240 RYALRADLHAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLRT 299 Query: 299 LHAAHHPRG 307 LHA HHPRG Sbjct: 300 LHAQHHPRG 308 >ref|ZP_04579503.1| tyrosine recombinase XerD [Oxalobacter formigenes OXCC13] gb|EEO30476.1| tyrosine recombinase XerD [Oxalobacter formigenes OXCC13] Length = 312 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 209/300 (69%), Positives = 244/300 (81%), Gaps = 1/300 (0%) Query: 9 EAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKA-LYETQAEDLN 67 +A + + +DEFCD++WLEDGLSKNTL+AYRRD+ L+A WL + L + LN Sbjct: 8 QASSANHSFVDEFCDTVWLEDGLSKNTLDAYRRDLLLFARWLEKNCPDIDLLKVDQNHLN 67 Query: 68 AYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQ 127 YF ARH ++K +S+NRRL VLKRF++L LR ++ +PCLKL++A+Q RFPKTLSE Q Sbjct: 68 DYFWARHAESKATSANRRLTVLKRFYRLQLRLGRISENPCLKLKAAKQAARFPKTLSETQ 127 Query: 128 VEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTR 187 VEALL APD LGLRDRAMIELMYASGLRVSELV LK +EVGMNEGVLR+ GKG KTR Sbjct: 128 VEALLGAPDQEKSLGLRDRAMIELMYASGLRVSELVDLKLVEVGMNEGVLRIIGKGEKTR 187 Query: 188 LVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVT 247 LVPFGEEA WL RY+ +AR+ IL G++ D LFVTARG MTRQMFWTLIKKYAL++G+ Sbjct: 188 LVPFGEEARVWLERYMQDARSLILAGKMSDYLFVTARGTAMTRQMFWTLIKKYALKSGIH 247 Query: 248 ARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 LSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVA++RLKQLHA HHPRG Sbjct: 248 EPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVAQQRLKQLHAMHHPRG 307 >ref|ZP_04577354.1| tyrosine recombinase XerD [Oxalobacter formigenes HOxBLS] gb|EEO28316.1| tyrosine recombinase XerD [Oxalobacter formigenes HOxBLS] Length = 303 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 208/292 (71%), Positives = 240/292 (82%), Gaps = 1/292 (0%) Query: 17 AIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQER-AKALYETQAEDLNAYFAARHD 75 AIDEFC+++WLEDGLS+NTL+AYRRDM L+A WL + L E + LN+YF ARH Sbjct: 2 AIDEFCETVWLEDGLSQNTLDAYRRDMQLFAQWLEKNGPGTRLLEVTPDILNSYFLARHS 61 Query: 76 QTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEALLAAP 135 ++K +S+NRRL VLKRF++L R +A +PC K+ +A+QP RFP TLSE QVE+LL AP Sbjct: 62 ESKATSANRRLTVLKRFYRLQFRLGRLAVNPCQKMHAAKQPARFPGTLSETQVESLLIAP 121 Query: 136 DVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTRLVPFGEEA 195 V PLGLRDR MIELMYASGLRVSELV LK +EVGMNEGVLR+ GKGSKTRLVPFGEEA Sbjct: 122 RVENPLGLRDRTMIELMYASGLRVSELVTLKLVEVGMNEGVLRILGKGSKTRLVPFGEEA 181 Query: 196 GSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVTARLSPHTL 255 W+ RY+ E+R IL G+V D LFVTARG MTRQMFWTLI+KYALQ+G+ LSPHTL Sbjct: 182 RIWIERYMRESRPFILAGKVSDYLFVTARGTSMTRQMFWTLIRKYALQSGIHEPLSPHTL 241 Query: 256 RHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 RHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVA++RLKQLHA HHPRG Sbjct: 242 RHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVAQQRLKQLHAIHHPRG 293 >ref|ZP_00946119.1| Integrase/recombinase (XerD/RipX family) [Ralstonia solanacearum UW551] ref|YP_002258888.1| integrase/recombinase protein [Ralstonia solanacearum IPO1609] gb|EAP71408.1| Integrase/recombinase (XerD/RipX family) [Ralstonia solanacearum UW551] emb|CAQ17480.1| integrase/recombinase protein [Ralstonia solanacearum MolK2] emb|CAQ60814.1| integrase/recombinase protein [Ralstonia solanacearum IPO1609] Length = 308 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/309 (69%), Positives = 248/309 (80%), Gaps = 3/309 (0%) Query: 1 MGRTTPKIEA-PAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALY 59 M T P A P S EAI FCD+LWLEDGL++NTL+AYRRD+TLYA WL R KA+ Sbjct: 1 MTDTAPDTPALPPRSTEAIQRFCDALWLEDGLARNTLDAYRRDLTLYAQWL-AGRGKAID 59 Query: 60 ETQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRF 119 +T+ +DL YFAARH++++ S++NRR V KRFFQ ALR+H V ADP L +A+QP R Sbjct: 60 QTEDDDLADYFAARHEESRASTANRRRTVFKRFFQWALREHVVGADPSRLLSTAKQPPRI 119 Query: 120 PKTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRV 179 PKTLSE QVEAL+AAPDV TPLGLRDRAMIELMYASGLRVSE+V LK++EVG+NEGV+RV Sbjct: 120 PKTLSEAQVEALIAAPDVDTPLGLRDRAMIELMYASGLRVSEIVALKTVEVGLNEGVVRV 179 Query: 180 TG-KGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIK 238 G KG K RLVPFG EAG WL RYL + R +L + DALFVTARG MTRQ FW LIK Sbjct: 180 IGGKGGKDRLVPFGAEAGDWLRRYLRDGRTALLGKRTADALFVTARGEGMTRQAFWHLIK 239 Query: 239 KYALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQ 298 +YAL+A + A LSPHTLRHAFATHLLNHGADLRVVQ+LLGHADISTTQIYTHVARERL+ Sbjct: 240 RYALRADIHAPLSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLRT 299 Query: 299 LHAAHHPRG 307 LHA HHPRG Sbjct: 300 LHAQHHPRG 308 >ref|YP_001021215.1| tyrosine recombinase XerD subunit [Methylibium petroleiphilum PM1] gb|ABM94980.1| tyrosine recombinase XerD subunit [Methylibium petroleiphilum PM1] Length = 309 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 212/297 (71%), Positives = 238/297 (80%) Query: 11 PAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTLYAHWLYQERAKALYETQAEDLNAYF 70 PA S AID F ++LW+EDGLS NTL AYRRD+TLYA WL K L + DL AY Sbjct: 13 PADSAVAIDAFLEALWVEDGLSDNTLAAYRRDLTLYARWLVHASGKPLDGSGEADLRAYA 72 Query: 71 AARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFPKTLSEGQVEA 130 RH T+ +S+NRRL V +R+F+ ALR+H ++ADP LKL +A+QP R PKTLSE QVEA Sbjct: 73 LERHAGTRATSANRRLTVFRRYFRWALREHRLSADPTLKLLAAKQPLRVPKTLSEAQVEA 132 Query: 131 LLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVTGKGSKTRLVP 190 LL APDV TPLGLRDRAM+E++YASGLRVSELV LKS+ VG +E LRVTGKGSK RLVP Sbjct: 133 LLEAPDVDTPLGLRDRAMLEILYASGLRVSELVTLKSVNVGYSEAALRVTGKGSKERLVP 192 Query: 191 FGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKYALQAGVTARL 250 FGEEA WLMRYLAEARA IL GQ DALFVTARGGPMTRQ FW LIK++A AG+ L Sbjct: 193 FGEEAHGWLMRYLAEARAAILGGQASDALFVTARGGPMTRQAFWQLIKRHAGAAGIQVPL 252 Query: 251 SPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLHAAHHPRG 307 SPHTLRHAFATHLLNHGADLR VQ+LLGHADISTT IYTHVARERLKQLH+ HHPRG Sbjct: 253 SPHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKQLHSQHHPRG 309