BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0027.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774276.1| hypothetical protein Hsero_0850 [Herbaspiril... 342 1e-92 ref|YP_001098770.1| putative Ala-tRNA(Pro) deacylase [Herminiimo... 290 4e-77 ref|YP_001352166.1| hypothetical protein mma_0476 [Janthinobacte... 281 2e-74 ref|YP_003908040.1| ybaK/ebsC protein [Burkholderia sp. CCGE1003... 265 1e-69 ref|YP_986971.1| ybaK/ebsC protein [Acidovorax sp. JS42] >gi|120... 265 2e-69 ref|YP_002553682.1| ybak/ebsc protein [Acidovorax ebreus TPSY] >... 264 4e-69 ref|YP_004754209.1| transcriptional regulator [Collimonas fungiv... 263 6e-69 ref|YP_560234.1| hypothetical protein Bxe_A0752 [Burkholderia xe... 263 7e-69 ref|ZP_02884671.1| ybaK/ebsC protein [Burkholderia graminis C4D1... 263 7e-69 ref|YP_001896826.1| ybaK/ebsC protein [Burkholderia phytofirmans... 263 9e-69 >ref|YP_003774276.1| hypothetical protein Hsero_0850 [Herbaspirillum seropedicae SmR1] gb|ADJ62368.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 166 Score = 342 bits (877), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 166/166 (100%), Positives = 166/166 (100%) Query: 1 MSAKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDE 60 MSAKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDE Sbjct: 1 MSAKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDE 60 Query: 61 AAKPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVY 120 AAKPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVY Sbjct: 61 AAKPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVY 120 Query: 121 VESSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALADPA 166 VESSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALADPA Sbjct: 121 VESSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALADPA 166 >ref|YP_001098770.1| putative Ala-tRNA(Pro) deacylase [Herminiimonas arsenicoxydans] emb|CAL60641.1| putative prolyl-tRNA synthetase associated [Herminiimonas arsenicoxydans] Length = 163 Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 135/162 (83%), Positives = 150/162 (92%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 AKKEHISETPAT FLR++ +AF+EHPYDYEEHGGT+VS+R+LGVDEHAV+KTLVMQDEAA Sbjct: 2 AKKEHISETPATHFLRRKEIAFSEHPYDYEEHGGTTVSARKLGVDEHAVVKTLVMQDEAA 61 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 KPL+VLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRK MPVYVE Sbjct: 62 KPLIVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKTMPVYVE 121 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SIL+L KIYINGGRRG+L+GI P V+ +VL A VQCAL + Sbjct: 122 QSILDLEKIYINGGRRGYLIGIAPQVLTQVLSATTVQCALEE 163 >ref|YP_001352166.1| hypothetical protein mma_0476 [Janthinobacterium sp. Marseille] gb|ABR90097.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 168 Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 130/162 (80%), Positives = 148/162 (91%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 AKKEHISETPATQ+LR+QG+ F+EHPYDYEEHGGT+VS+++LGVDEH V+KTLVMQDEAA Sbjct: 7 AKKEHISETPATQWLRRQGIGFSEHPYDYEEHGGTTVSAQKLGVDEHHVVKTLVMQDEAA 66 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 KPL+VLMHGD KVSTKNLARQIGCKSVEPCKP+VANRHSG+LIGGTSPFGTRK MPVYVE Sbjct: 67 KPLIVLMHGDRKVSTKNLARQIGCKSVEPCKPDVANRHSGYLIGGTSPFGTRKQMPVYVE 126 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SIL L IYINGGRRG+L+GI P V++ L A+PVQCAL + Sbjct: 127 QSILALEHIYINGGRRGYLIGIAPQVLIDKLAAQPVQCALEE 168 >ref|YP_003908040.1| ybaK/ebsC protein [Burkholderia sp. CCGE1003] gb|ADN58749.1| ybaK/ebsC protein [Burkholderia sp. CCGE1003] Length = 186 Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 124/162 (76%), Positives = 140/162 (86%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 +K H+SETPATQFLR+ GV F EHPYDY EHGGT S+R+LGVDEH V+KTLVM+DE A Sbjct: 25 SKSRHVSETPATQFLRRHGVTFGEHPYDYVEHGGTGESARQLGVDEHHVVKTLVMEDEHA 84 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 KPL+VLMHGD VSTKNLARQIG K VEPCKPEVANRHSG+LIGGTSPFGTRK MPVYVE Sbjct: 85 KPLIVLMHGDRTVSTKNLARQIGAKRVEPCKPEVANRHSGYLIGGTSPFGTRKQMPVYVE 144 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SSILEL +I++NGGRRGFLV I+P+V+ +L AKPVQCA D Sbjct: 145 SSILELDRIWLNGGRRGFLVSIEPSVLTGLLAAKPVQCASVD 186 >ref|YP_986971.1| ybaK/ebsC protein [Acidovorax sp. JS42] gb|ABM42895.1| ybaK/ebsC protein [Acidovorax sp. JS42] Length = 166 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 122/161 (75%), Positives = 142/161 (88%) Query: 4 KKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAAK 63 K H+SETPATQ LR VAFTEHPYDY EHGGT+ S+R+LG+DEH V+KTLVMQD+ AK Sbjct: 6 KTAHVSETPATQLLRAHKVAFTEHPYDYVEHGGTAESARQLGLDEHVVVKTLVMQDQDAK 65 Query: 64 PLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVES 123 PL+VLMHGDCKVSTKNLARQIG KSVEPCKPEVANRHSG+L+GGTSPFGTRK MPV++E Sbjct: 66 PLIVLMHGDCKVSTKNLARQIGAKSVEPCKPEVANRHSGYLVGGTSPFGTRKQMPVFIEE 125 Query: 124 SILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SIL+L +I INGGRRGFLV +DP V +++L A+PVQCALA+ Sbjct: 126 SILQLPRIAINGGRRGFLVQLDPQVCVQLLGARPVQCALAE 166 >ref|YP_002553682.1| ybak/ebsc protein [Acidovorax ebreus TPSY] gb|ACM33682.1| ybaK/ebsC protein [Acidovorax ebreus TPSY] Length = 166 Score = 264 bits (674), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 122/161 (75%), Positives = 141/161 (87%) Query: 4 KKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAAK 63 K H+SETPATQ LR VAFTEHPYDY EHGGT S+R+LG+DEH V+KTLVMQD+ AK Sbjct: 6 KTAHVSETPATQLLRAHKVAFTEHPYDYLEHGGTEESARQLGLDEHVVVKTLVMQDQDAK 65 Query: 64 PLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVES 123 PL+VLMHGDCKVSTKNLARQIG KSVEPCKPEVANRHSG+L+GGTSPFGTRK MPV++E Sbjct: 66 PLIVLMHGDCKVSTKNLARQIGAKSVEPCKPEVANRHSGYLVGGTSPFGTRKQMPVFIEE 125 Query: 124 SILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SIL+L +I INGGRRGFLV +DP V +++L A+PVQCALA+ Sbjct: 126 SILQLPRIAINGGRRGFLVQLDPQVCVQLLGARPVQCALAE 166 >ref|YP_004754209.1| transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK63386.1| Transcriptional regulator [Collimonas fungivorans Ter331] Length = 161 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 123/159 (77%), Positives = 139/159 (87%) Query: 6 EHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAAKPL 65 +HISETPATQFLRK G F+EHPY YEEHGGT+VS+R LGVDEH V+KTLVMQDEAAKPL Sbjct: 3 KHISETPATQFLRKHGAVFSEHPYAYEEHGGTTVSARALGVDEHHVVKTLVMQDEAAKPL 62 Query: 66 LVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVESSI 125 ++LMHGD KVSTKNLARQIG KSVEPCKPEVANRHSG+LIGGTSPF TRKA+PVY+E SI Sbjct: 63 IILMHGDRKVSTKNLARQIGRKSVEPCKPEVANRHSGYLIGGTSPFATRKALPVYIEESI 122 Query: 126 LELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 L L KIYINGGRRG+L+G+ P + +L AK VQCAL + Sbjct: 123 LALQKIYINGGRRGYLIGMAPHSVADLLQAKTVQCALDE 161 >ref|YP_560234.1| hypothetical protein Bxe_A0752 [Burkholderia xenovorans LB400] gb|ABE32182.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 163 Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 121/162 (74%), Positives = 140/162 (86%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 +K H+SETPATQFLR+ GV F EHPYDY EHGGT S+R+LGVDEH V+KTLVM+DE A Sbjct: 2 SKSRHVSETPATQFLRRHGVTFGEHPYDYVEHGGTGESARQLGVDEHHVVKTLVMEDEHA 61 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 +PL+VLMHGD VSTKNLARQIG K VEPCKPEVANRHSG+LIGGTSPFGTRK MPVYVE Sbjct: 62 RPLIVLMHGDRTVSTKNLARQIGAKRVEPCKPEVANRHSGYLIGGTSPFGTRKQMPVYVE 121 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SSIL++ +I++NGGRRGFLV I+P V+ ++L AKPVQCA D Sbjct: 122 SSILQMDQIWLNGGRRGFLVSIEPKVLTQLLAAKPVQCASVD 163 >ref|ZP_02884671.1| ybaK/ebsC protein [Burkholderia graminis C4D1M] gb|EDT09836.1| ybaK/ebsC protein [Burkholderia graminis C4D1M] Length = 163 Score = 263 bits (672), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 122/162 (75%), Positives = 140/162 (86%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 +K H+SETPATQFLR+ GVAF EHPYDY EHGGT S+R+LGVDEH V+KTLVM+DE A Sbjct: 2 SKSRHVSETPATQFLRRHGVAFGEHPYDYVEHGGTGESARQLGVDEHQVVKTLVMEDEHA 61 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 KPL+VLMHGD VSTKNLARQIG K VEPCKPEVANRHSG+LIGGTSPFGTRK MPVYVE Sbjct: 62 KPLIVLMHGDRTVSTKNLARQIGAKRVEPCKPEVANRHSGYLIGGTSPFGTRKQMPVYVE 121 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 S+ILE+ +I++NGGRRGFLV I+P V+ +L A+PVQCA D Sbjct: 122 STILEMERIWLNGGRRGFLVSIEPKVLTGLLGARPVQCASVD 163 >ref|YP_001896826.1| ybaK/ebsC protein [Burkholderia phytofirmans PsJN] gb|ACD17602.1| ybaK/ebsC protein [Burkholderia phytofirmans PsJN] Length = 163 Score = 263 bits (671), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 123/162 (75%), Positives = 138/162 (85%) Query: 3 AKKEHISETPATQFLRKQGVAFTEHPYDYEEHGGTSVSSRELGVDEHAVIKTLVMQDEAA 62 +K H+SETPATQFLR+ GVAF EHPYDY EHGGT S+R+LGVDEH V+KTLVM+DE A Sbjct: 2 SKSRHVSETPATQFLRRHGVAFGEHPYDYVEHGGTGESARQLGVDEHHVVKTLVMEDEHA 61 Query: 63 KPLLVLMHGDCKVSTKNLARQIGCKSVEPCKPEVANRHSGFLIGGTSPFGTRKAMPVYVE 122 KPL VLMHGD VSTKNLARQIG K VEPCKPEVANRHSG+LIGGTSPFGT+K MPVYVE Sbjct: 62 KPLTVLMHGDRTVSTKNLARQIGAKRVEPCKPEVANRHSGYLIGGTSPFGTKKQMPVYVE 121 Query: 123 SSILELGKIYINGGRRGFLVGIDPAVILKVLPAKPVQCALAD 164 SSILE+ KI++NGGRRGFLV IDP V+ ++L K VQCA D Sbjct: 122 SSILEMDKIWLNGGRRGFLVSIDPKVLTQLLAVKAVQCASVD 163