BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0009.p (598 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774294.1| DNA primase [Herbaspirillum seropedicae SmR1... 1221 0.0 ref|YP_004751681.1| DNA primase [Collimonas fungivorans Ter331] ... 917 0.0 ref|YP_001352182.1| DNA primase [Janthinobacterium sp. Marseille... 915 0.0 ref|YP_001098787.1| DNA primase [Herminiimonas arsenicoxydans] >... 907 0.0 ref|ZP_08274383.1| DNA primase [Oxalobacteraceae bacterium IMCC9... 882 0.0 ref|ZP_04577181.1| DNA primase [Oxalobacter formigenes HOxBLS] >... 724 0.0 ref|ZP_04579317.1| DNA primase [Oxalobacter formigenes OXCC13] >... 711 0.0 ref|YP_002006226.1| DNA primase [Cupriavidus taiwanensis LMG 194... 699 0.0 ref|YP_727173.1| DNA primase [Ralstonia eutropha H16] >gi|113527... 699 0.0 ref|YP_004686419.1| DNA primase DnaG [Cupriavidus necator N-1] >... 697 0.0 >ref|YP_003774294.1| DNA primase [Herbaspirillum seropedicae SmR1] gb|ADJ62386.1| DNA primase protein [Herbaspirillum seropedicae SmR1] Length = 598 Score = 1221 bits (3158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/598 (99%), Positives = 598/598 (100%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM Sbjct: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE Sbjct: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF Sbjct: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR Sbjct: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE Sbjct: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT Sbjct: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA Sbjct: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV Sbjct: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG 598 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG Sbjct: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVAAG 598 >ref|YP_004751681.1| DNA primase [Collimonas fungivorans Ter331] gb|AEK60858.1| DNA primase [Collimonas fungivorans Ter331] Length = 598 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/593 (75%), Positives = 504/593 (84%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGAN MGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANLMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSG+GFVEAVKDLAQ VGM VP+ +D IP AQR E QAKSMALSD M Sbjct: 61 CGAHGTAIGFLIEYSGLGFVEAVKDLAQGVGMTVPDNDDKIPPAQRAEYQAKSMALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 + A DFYR LRSA A+ YLK RGLTGE+AA+FGLGYSPD WDSLRQVFPDY+ ALVE Sbjct: 121 SAACDFYRQHLRSAPNAVDYLKRRGLTGEVAAKFGLGYSPDNWDSLRQVFPDYEATALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 SGLVID+++E G +RKRYDRFR RIMFPIRNTKGQVIGFGGRV+D GEPKYLNSPETPLF Sbjct: 181 SGLVIDRTDEEGNNRKRYDRFRDRIMFPIRNTKGQVIGFGGRVLDSGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIR+AGY LVTEGYMDVVALAQLGFPQAVATLGTACTP HV KL+R Sbjct: 241 QKGSELYGLFEARQAIRDAGYVLVTEGYMDVVALAQLGFPQAVATLGTACTPTHVHKLLR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTD V+FSFDGD AGR+AARRAL+ACLPHA+DNK IKFLFLP+EHDPDS+VREMGA AFE Sbjct: 301 QTDHVVFSFDGDRAGRKAARRALDACLPHATDNKVIKFLFLPQEHDPDSFVREMGAEAFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 QI +A+PLSQFLL E+ E DL T EGRA AQ+ AKPL+Q +P S+LRLQIVR +AQ T Sbjct: 361 RQIHDAMPLSQFLLNEVTAEADLSTSEGRARAQYDAKPLMQLMPPSSLRLQIVRGLAQLT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 QSTP E+E LFEL KP+A R AP RS R PVGLERQI+RLLVAHP A++LD AL+A Sbjct: 421 QSTPNEIESLFELAKPIASARRAPPRSNRPPPVGLERQIIRLLVAHPAFASELDDAALDA 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 +A APD+AEML L+ + MGEQANFA L EHLREGG +F+S+IAEIAAESESE + Sbjct: 481 VAHFAPDRAEMLARLITASHAMGEQANFATLAEHLREGGEDFESLIAEIAAESESETEAA 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGA 593 R E+ GAIRQ +++ L EE+ L + L ++ RNRYRELMQ++E L+R+A A Sbjct: 541 RLELAGAIRQTKMKTLKEELDQLAATGLGNDDARNRYRELMQKQEQLRREAEA 593 >ref|YP_001352182.1| DNA primase [Janthinobacterium sp. Marseille] gb|ABR88395.1| DNA primase [Janthinobacterium sp. Marseille] Length = 599 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/593 (76%), Positives = 515/593 (86%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFVEAVKDLAQNVGM+VPE ED +P AQR E QAKSMALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVEAVKDLAQNVGMIVPEAEDRLPPAQRAEHQAKSMALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A D+YR QLR A+ A YL GRGLTGEIAAR+G+GY+PD WD LR VFPDY+ EALVE Sbjct: 121 TQACDYYRQQLRHAERAKNYLIGRGLTGEIAARYGMGYAPDGWDGLRSVFPDYEVEALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 SGLVIDK+EE GA+RKRYDRFR RIMFPIRNTKGQVIGFGGRV+D GEPKYLNSPETPLF Sbjct: 181 SGLVIDKAEEEGANRKRYDRFRDRIMFPIRNTKGQVIGFGGRVLDNGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKL+R Sbjct: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLLR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTDQVIFSFDGD AGRRAARRALEA LPHA DNK IKFLFLP EHDPDSY+RE+G AFE Sbjct: 301 QTDQVIFSFDGDKAGRRAARRALEASLPHAGDNKVIKFLFLPSEHDPDSYIRELGTEAFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 +Q+++A+PLSQFLL+E +G+NDL TPEGRA AQF AKPLLQALP S+LRLQIVRS+AQ T Sbjct: 361 KQVQDAMPLSQFLLKEAVGDNDLGTPEGRARAQFDAKPLLQALPPSSLRLQIVRSLAQIT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 +STPAE+E LFEL +P++RVRAAP R+KR AP GLERQIMRLLV+HP LAA++D AL+ Sbjct: 421 ESTPAEIEALFELAQPISRVRAAPPRTKRAAPQGLERQIMRLLVSHPILAAEMDQAALDI 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 A AP++AEML LV +++ MG QANFA L E LR G +F+ +IAEIAAE ES+ + Sbjct: 481 AAHFAPERAEMLVQLVTLSREMGPQANFAILAELLRSSGSDFEPLIAEIAAEPESDVALA 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGA 593 R E+ GAIRQ +++AL +E+ LV + L E+ + R+REL +++ L+RQA A Sbjct: 541 RLELAGAIRQTKMQALRDELDQLVAAGLVGEQAQARFRELTLQQDQLRRQAQA 593 >ref|YP_001098787.1| DNA primase [Herminiimonas arsenicoxydans] emb|CAL60658.1| DNA primase [Herminiimonas arsenicoxydans] Length = 602 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/599 (75%), Positives = 511/599 (85%), Gaps = 3/599 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFVEAVKDLAQNVGM+VPE ED +P AQR E+QAKSMALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVEAVKDLAQNVGMLVPEAEDRLPPAQRAEQQAKSMALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 RA DFYR QLR A+ A YL GRGLTGE+AAR+G+GY+PD WD LR VFPDY+ +ALVE Sbjct: 121 NRACDFYRQQLRHAEGAKNYLIGRGLTGEVAARYGMGYAPDGWDGLRAVFPDYELDALVE 180 Query: 181 SGLVIDKSEEGGA---HRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPET 237 GLVIDK+EE GA RKRYDRFR RIMFPIRN+KGQVIGFGGRVM GEPKYLNSPET Sbjct: 181 CGLVIDKAEEEGADHRQRKRYDRFRDRIMFPIRNSKGQVIGFGGRVMGDGEPKYLNSPET 240 Query: 238 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQK 297 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACT IHVQK Sbjct: 241 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTSIHVQK 300 Query: 298 LVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAP 357 L+RQTDQVIFSFDGD AGRRAARRALEA LP+A DNK IKFLFLP EHDPDSY+R MGA Sbjct: 301 LLRQTDQVIFSFDGDKAGRRAARRALEASLPYAGDNKVIKFLFLPSEHDPDSYIRAMGAE 360 Query: 358 AFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVA 417 +FE+Q+++A+PLSQFLL+E +G+NDL TPEGRA QF AKPLLQALP S+LRLQIVR +A Sbjct: 361 SFEKQVQDAMPLSQFLLKEAVGDNDLGTPEGRARTQFDAKPLLQALPPSSLRLQIVRGLA 420 Query: 418 QATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGA 477 Q T+STPAE+E LFEL +P++RVRAAP + KRTAPVGLERQIMRLLV HP LAA+LD A Sbjct: 421 QITESTPAEIEALFELVQPISRVRAAPPKGKRTAPVGLERQIMRLLVEHPVLAAELDQAA 480 Query: 478 LEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEF 537 L+ A AP++A+ML LV +++ MG ANFA L E LR G +FD+++AEIAAESES+ Sbjct: 481 LDVAAHFAPERADMLVQLVTMSREMGVHANFATLAELLRSSGSDFDTLVAEIAAESESDV 540 Query: 538 DVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVA 596 D R E+ GAIRQ +++ L EM+ L+ S L E+ + RYREL ++E L+RQA A +A Sbjct: 541 DAARLELAGAIRQTKMKMLATEMETLIASGLSGEQAQARYRELTLQQEQLRRQAQAEMA 599 >ref|ZP_08274383.1| DNA primase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32146.1| DNA primase [Oxalobacteraceae bacterium IMCC9480] Length = 598 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/596 (73%), Positives = 498/596 (83%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHGTAI FLIEYSGMGFV+AVKDLAQNVGM+VPE +D +P AQR E QAKS+ALS+ M Sbjct: 61 CGAHGTAIGFLIEYSGMGFVDAVKDLAQNVGMMVPESDDKMPPAQRAEYQAKSLALSEAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A D YR QLR+A+ A YL GRGLTGEIAARFG+GY+P+ WDSLR VFPDY+ ALVE Sbjct: 121 TQACDHYRLQLRTAERAKGYLIGRGLTGEIAARFGIGYAPEGWDSLRSVFPDYELTALVE 180 Query: 181 SGLVIDKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETPLF 240 +GLVID+++E G +RKRYDRFR RIMFPIRNTKGQVIGFGGR++D GEPKYLNSPETPLF Sbjct: 181 AGLVIDRTDEEGGNRKRYDRFRDRIMFPIRNTKGQVIGFGGRILDSGEPKYLNSPETPLF 240 Query: 241 QKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKLVR 300 QKGSELYGLFEARQAIR+AGY LVTEGYMDVVALAQLGFPQ VATLGTACT +HVQKL R Sbjct: 241 QKGSELYGLFEARQAIRDAGYVLVTEGYMDVVALAQLGFPQVVATLGTACTAVHVQKLSR 300 Query: 301 QTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPAFE 360 QTD VIFSFDGD AGRRAARRALEA LP+A+DNKTIKFLFLP EHDPDSYVRE G FE Sbjct: 301 QTDHVIFSFDGDGAGRRAARRALEASLPYAADNKTIKFLFLPSEHDPDSYVREHGTAGFE 360 Query: 361 EQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQAT 420 +Q+R+A+PLSQFLL+ + +NDL T EGRA QF AKPLLQA+PAS+LRLQIVR +AQ T Sbjct: 361 QQVRDAMPLSQFLLKVVTDDNDLTTSEGRAKVQFDAKPLLQAMPASSLRLQIVRELAQLT 420 Query: 421 QSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGALEA 480 ++TP E+E LFEL P ARVRAAP R KRTAPVGLE Q+MRLLVAHP LA++LD AL+A Sbjct: 421 RTTPTEIETLFELASPAARVRAAPPRGKRTAPVGLELQVMRLLVAHPVLASELDQDALDA 480 Query: 481 IARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFDVV 540 + PD A ML LV Q MG QA+FA L EHLR GGPEFD MIAE+AAE ES+ D Sbjct: 481 MLHFVPDSAVMLMQLVVAGQEMGAQASFAMLSEHLRAGGPEFDGMIAEVAAEPESDRDAA 540 Query: 541 RAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGAAVA 596 R E+ GA+RQ +++ L E+ L + +E R RYREL ++E L+R A A ++ Sbjct: 541 RLELAGAVRQTKMKVLKAELDQLAAGGMGHDEARTRYRELTLKQEQLRRDAEAEIS 596 >ref|ZP_04577181.1| DNA primase [Oxalobacter formigenes HOxBLS] gb|EEO28143.1| DNA primase [Oxalobacter formigenes HOxBLS] Length = 603 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/593 (60%), Positives = 452/593 (76%), Gaps = 4/593 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNR+DIV+VVG VQLKK GANF+GLCPFH EK+PSFTVSP KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRIDIVEVVGNRVQLKKAGANFLGLCPFHTEKTPSFTVSPVKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CG +G+AI+FL+E+SG+ FVEAV++LAQ GM VP + + QR +KQAK++AL++VM Sbjct: 61 CGRNGSAITFLMEHSGLSFVEAVEELAQGAGMTVPRDDTRVSPEQRAQKQAKTLALTEVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A+ +YR QL+ ++ AIAYLK RG++GE+A RFGLGY+P DSL+ F +Y + LVE Sbjct: 121 TQASRYYRQQLKQSEAAIAYLKKRGVSGEMAFRFGLGYAPATRDSLKNGFENYRADELVE 180 Query: 181 SGLVIDKSEEGGA---HRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPET 237 +GLVI+K E+ A +RYDRFR RIMFPIRNT+GQVI FGGR+++ GEPKYLNSPET Sbjct: 181 AGLVIEKHEDDRAVVSGERRYDRFRDRIMFPIRNTRGQVIAFGGRILEKGEPKYLNSPET 240 Query: 238 PLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQK 297 PLFQKGSELYGLFEARQAIREAGY LV EGYMDVVALAQLGFPQ+VATLGTACT VQK Sbjct: 241 PLFQKGSELYGLFEARQAIREAGYVLVVEGYMDVVALAQLGFPQSVATLGTACTSAQVQK 300 Query: 298 LVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAP 357 L+RQTD+++FSFDGDNAG+ AARRALEA LP SD K++ FLFLP EHDPDSYVRE GA Sbjct: 301 LMRQTDRIVFSFDGDNAGKGAARRALEASLPLVSDTKSVAFLFLPPEHDPDSYVREYGAG 360 Query: 358 AFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVA 417 AFE+Q+ A+PLS+F+L+E++ ND+ T EGRA AQ AKP QA+ SALRLQI+R + Sbjct: 361 AFEKQVEGAMPLSEFMLQELVAGNDMNTLEGRARAQHKAKPWCQAMAPSALRLQIMRKLG 420 Query: 418 QATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGA 477 Q TQ+ ELE E+ +PVAR R AR R VGLERQ+MRLL+ +PQ AA L Sbjct: 421 QITQTPDDELEAFLEVARPVARSRRREARLPRPPVVGLERQVMRLLLMYPQFAARLSEAD 480 Query: 478 LEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEF 537 + AI +PD+ ++L ++ + +GEQ ++A LVE+LR G + + ++ E + E E Sbjct: 481 IGAIVDFSPDKGDLLKTVLSAIRELGEQGSYATLVEYLRSGKVDCEQLVHE-TLDREYEQ 539 Query: 538 DVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQ 590 ++ E+ GA+RQ R R L EM+ L +S L EE+ RY EL +++E LK++ Sbjct: 540 ELALMELVGAVRQIRSRVLASEMEKLFSSGLVGEEENRRYYELKKQQEELKKE 592 >ref|ZP_04579317.1| DNA primase [Oxalobacter formigenes OXCC13] gb|EEO30290.1| DNA primase [Oxalobacter formigenes OXCC13] Length = 599 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/595 (61%), Positives = 449/595 (75%), Gaps = 3/595 (0%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIV+VVG +VQLKK GAN +GLCPFH EKSPSFTVSP KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVEVVGNHVQLKKAGANLLGLCPFHTEKSPSFTVSPVKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CG +G+AI+FL+E+SG+ FVEAV++LA +VGM VPE E IP +R +KQAK++AL++VM Sbjct: 61 CGRNGSAITFLMEHSGLSFVEAVEELAGSVGMTVPEDETRIPPGERAKKQAKTLALTEVM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDYDNEALVE 180 T+A+ FYR QL+ A AI YLK RG+TGEIA RFGLGY+P+ DSL+ F DY L E Sbjct: 121 TQASRFYRQQLKKAPEAIDYLKKRGVTGEIALRFGLGYAPEARDSLKNGFEDYRASELEE 180 Query: 181 SGLVIDKSEEGGAH--RKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSPETP 238 +GLVI+K + H KRYDRFR RIMFPIRNT+GQVIGFGGR+++ GEPKYLNSPETP Sbjct: 181 AGLVIEKQGDEAFHTSSKRYDRFRDRIMFPIRNTRGQVIGFGGRILEKGEPKYLNSPETP 240 Query: 239 LFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHVQKL 298 LFQKG+ELYGLFEARQAIRE+GY LV EGYMDVVALAQLGFPQAVATLGTACTP+ VQKL Sbjct: 241 LFQKGNELYGLFEARQAIRESGYVLVVEGYMDVVALAQLGFPQAVATLGTACTPVQVQKL 300 Query: 299 VRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMGAPA 358 +RQTD VIFSFDGD AGR AARRALEA LP SD K + FLFLP EHDPDSYVRE G A Sbjct: 301 MRQTDSVIFSFDGDAAGRGAARRALEASLPLVSDTKGVGFLFLPPEHDPDSYVREFGPEA 360 Query: 359 FEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRSVAQ 418 F+ +++A+PLS+FLL EI+G+N+L T EGRA AQ AK L +L SALRLQI+R +AQ Sbjct: 361 FDALVKKAMPLSEFLLEEIVGDNNLNTLEGRARAQHTAKSLCASLTPSALRLQILRRLAQ 420 Query: 419 ATQSTPAELEVLFELEKPVARVRAAPARSKRTAPVGLERQIMRLLVAHPQLAADLDAGAL 478 TQ+ ELE KPV + R AR+ R VGLERQ++RLL+ P+ +L + Sbjct: 421 ITQTPDGELETFLGFSKPVVQTRRIQARAPRPPVVGLERQVLRLLMMFPRFGEELSPDDI 480 Query: 479 EAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAESESEFD 538 + I +PDQ E+L ++ MGEQAN AALVEHLR G + + ++ E + E E + Sbjct: 481 DTIKGFSPDQGELLMAILNAYGVMGEQANLAALVEHLRLDGVDCEQLVQETVGQ-EFEAE 539 Query: 539 VVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEEDRNRYRELMQRKEWLKRQAGA 593 E+ GA+RQ ++R L E++ L +S+L TEE RY EL Q++E L+++ A Sbjct: 540 PALLELKGAVRQIKLRVLSSELEKLFSSSLTTEEKNRRYYELKQQQETLQKEMNA 594 >ref|YP_002006226.1| DNA primase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70163.1| DNA PRIMASE [Cupriavidus taiwanensis LMG 19424] Length = 603 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/582 (64%), Positives = 437/582 (75%), Gaps = 21/582 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+E+SG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEFSGQSYPEAVRELAQSVGMTVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDY--DNEA- 177 TRA DFYR QLR A AI YLKGRGLTGEIA +FGLGY+PD+W L VF Y DN A Sbjct: 121 TRATDFYRRQLRGAPQAIQYLKGRGLTGEIAGQFGLGYAPDDWQGLETVFGSYRDDNVAA 180 Query: 178 -LVESGLVI--DKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE+GL+I DK + G R RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNS Sbjct: 181 PLVEAGLLIESDKRDADGKPR-RYDRFRDRIMFPIRNTKGAVIGFGGRVMGQGEPKYLNS 239 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 240 PETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 299 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD+AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE Sbjct: 300 VQKLLRQTDAVVFSFDGDSAGRRAARRALEACLPHVADNKTIRFLFLPAEHDPDSYVREE 359 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q+R A+PLS+FLL+ + E DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 360 GREAFAAQVRNAMPLSRFLLQSVTEELDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVR 419 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A AT +TPAE+E + L ARV A P R++R AP GLE+++++LL+ +P L+A Sbjct: 420 ELADATGTTPAEIEAICGLRSDPARVGRFAQPRPRARRQAPTGLEQRVIQLLMCYPALSA 479 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAA 531 LD A + +E+L HLV G+ + NFAA EHL + S AE+ A Sbjct: 480 RLDEDARALLLDGEGGDSEVLAHLVSACDGVQGEVNFAAFSEHLAQ------SPYAEVYA 533 Query: 532 ESESEFDVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEED 573 + + V+R E+ A + D + L+ LR E D Sbjct: 534 AARTA--VLREEIEEA---PATQEFDAAITKLLAEPLRRELD 570 >ref|YP_727173.1| DNA primase [Ralstonia eutropha H16] emb|CAJ93805.1| DNA primase [Ralstonia eutropha H16] Length = 603 Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/582 (64%), Positives = 437/582 (75%), Gaps = 21/582 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+E+SG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEFSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDY--DNEA- 177 TRA DFYR QLRSA AI YLKGRGLTGEIAA FGLGY+PD+W L VF Y DN + Sbjct: 121 TRATDFYRRQLRSAPQAIQYLKGRGLTGEIAANFGLGYAPDDWQGLEAVFGSYRDDNVSA 180 Query: 178 -LVESGLVI--DKSEEGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNS 234 LVE GL+I DK + G R RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNS Sbjct: 181 PLVECGLLIESDKRDADGKPR-RYDRFRDRIMFPIRNTKGAVIGFGGRVMGQGEPKYLNS 239 Query: 235 PETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIH 294 PETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+H Sbjct: 240 PETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVH 299 Query: 295 VQKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREM 354 VQKL+RQTD V+FSFDGD+AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE Sbjct: 300 VQKLLRQTDAVVFSFDGDSAGRRAARRALEACLPHVADNKTIRFLFLPAEHDPDSYVREE 359 Query: 355 GAPAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVR 414 G AF Q+R A+PLS+FLL+ + + DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 360 GTEAFATQVRNAMPLSRFLLQSVTEDLDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVR 419 Query: 415 SVAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAA 471 +A AT +TPAE+E + L ARV A P R++R AP GLE+++++LL+ +P L+A Sbjct: 420 ELADATGTTPAEIEAICGLRSDPARVGRFAQPRPRTRRQAPTGLEQRVIQLLMCYPALSA 479 Query: 472 DLDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAA 531 LD A + +E+L HLV + + NFAA EHL + S AE+ A Sbjct: 480 RLDEDARALLLGGESSDSEVLAHLVEACDSVQGEVNFAAFSEHLAQ------SPYAEVYA 533 Query: 532 ESESEFDVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEED 573 + + V+R E+ A I+ D + L+ LR E D Sbjct: 534 VARAA--VLREEIEEA---PAIQDFDAAITKLLAEPLRRELD 570 >ref|YP_004686419.1| DNA primase DnaG [Cupriavidus necator N-1] gb|AEI77938.1| DNA primase DnaG [Cupriavidus necator N-1] Length = 603 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/581 (64%), Positives = 435/581 (74%), Gaps = 19/581 (3%) Query: 1 VIPQSFIQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 +IPQSFIQDLLNRVDIVDVVG+YVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 61 CGAHGTAISFLIEYSGMGFVEAVKDLAQNVGMVVPEREDSIPLAQRQEKQAKSMALSDVM 120 CGAHG+AI FL+E+SG + EAV++LAQ+VGM VPE D +P QR E+QA+S+ALSD M Sbjct: 61 CGAHGSAIGFLMEFSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 TRANDFYRHQLRSAQPAIAYLKGRGLTGEIAARFGLGYSPDEWDSLRQVFPDY--DNEA- 177 TRA DFYR QLR A AI YLKGRGLTGEIAA FGLGY+PD+W L VF Y DN + Sbjct: 121 TRATDFYRRQLRGAPQAIQYLKGRGLTGEIAANFGLGYAPDDWQGLEAVFGSYRDDNVSA 180 Query: 178 -LVESGLVIDKSE-EGGAHRKRYDRFRGRIMFPIRNTKGQVIGFGGRVMDGGEPKYLNSP 235 LVE GL+I+ + + +RYDRFR RIMFPIRNTKG VIGFGGRVM GEPKYLNSP Sbjct: 181 PLVECGLLIESEKRDADGKPRRYDRFRDRIMFPIRNTKGAVIGFGGRVMGQGEPKYLNSP 240 Query: 236 ETPLFQKGSELYGLFEARQAIREAGYALVTEGYMDVVALAQLGFPQAVATLGTACTPIHV 295 ETPLF KG+ELYGLFEAR AIRE GY LV EGYMDVVALAQLGF AVATLGTACTP+HV Sbjct: 241 ETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPVHV 300 Query: 296 QKLVRQTDQVIFSFDGDNAGRRAARRALEACLPHASDNKTIKFLFLPKEHDPDSYVREMG 355 QKL+RQTD V+FSFDGD+AGRRAARRALEACLPH +DNKTI+FLFLP EHDPDSYVRE G Sbjct: 301 QKLLRQTDAVVFSFDGDSAGRRAARRALEACLPHVADNKTIRFLFLPSEHDPDSYVREEG 360 Query: 356 APAFEEQIREALPLSQFLLREIIGENDLRTPEGRAHAQFAAKPLLQALPASALRLQIVRS 415 AF Q+R A+PLS+FLL+ + E DLR PEGRA AQ+ AKPLLQA+PA LRLQIVR Sbjct: 361 TEAFANQVRNAMPLSRFLLQSVTEELDLRQPEGRARAQYEAKPLLQAMPAGGLRLQIVRE 420 Query: 416 VAQATQSTPAELEVLFELEKPVARVR--AAP-ARSKRTAPVGLERQIMRLLVAHPQLAAD 472 +A AT +TPAE+E + L ARV A P R++R AP GLE+++++LL+ +P L+A Sbjct: 421 LADATGTTPAEIEAICGLRSDPARVGRFAQPRPRTRRQAPTGLEQRVIQLLMCYPALSAR 480 Query: 473 LDAGALEAIARIAPDQAEMLTHLVGVAQGMGEQANFAALVEHLREGGPEFDSMIAEIAAE 532 LD A + +E+L HLV + + NFAA EHL + S AE+ A Sbjct: 481 LDEDARALLLGGESGDSEVLAHLVEACDSVQGEVNFAAFSEHLAQ------SPYAEVYAV 534 Query: 533 SESEFDVVRAEMGGAIRQARIRALDEEMQMLVTSNLRTEED 573 + + V+R E+ A I+ D + L+ LR E D Sbjct: 535 ARTA--VLREEIEEA---PAIQDFDAAITKLLAEPLRRELD 570