BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0006.p (579 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADR62109.1| Hypothetical protein, conserved [Pseudomonas puti... 581 e-163 ref|YP_001358916.1| hypothetical protein SUN_1609 [Sulfurovum sp... 202 2e-49 ref|YP_003750563.1| hypothetical protein RPSI07_mp1646 [Ralstoni... 178 2e-42 ref|ZP_04852695.1| conserved hypothetical protein [Paenibacillus... 150 4e-34 ref|ZP_08486810.1| hypothetical protein MetalDRAFT_3536 [Methylo... 150 5e-34 ref|YP_004488910.1| hypothetical protein DelCs14_3563 [Delftia s... 149 1e-33 ref|ZP_03530641.1| hypothetical protein RetlC8_30128 [Rhizobium ... 144 4e-32 ref|YP_204510.1| hypothetical protein VF_1127 [Vibrio fischeri E... 141 4e-31 ref|ZP_06355787.1| conserved hypothetical protein [Citrobacter y... 139 2e-30 ref|ZP_08411631.1| hypothetical protein PH505_ee00040 [Pseudoalt... 138 3e-30 >gb|ADR62109.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 561 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 304/552 (55%), Positives = 383/552 (69%), Gaps = 2/552 (0%) Query: 7 MSIQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIAEDGT 66 MSIQLVLS+YLSGL+ER ELDALLPELL+AMGHSV SR QVGV QGGVDVMST G Sbjct: 1 MSIQLVLSHYLSGLRERDELDALLPELLQAMGHSVHSRAQVGVNQGGVDVMSTKENAQGQ 60 Query: 67 ETVFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGEL 126 VFLFIIKFG+V R+D Y QAI+PS+R+A ++VRNR+Q PLQ K IVLVSNG L Sbjct: 61 TEVFLFIIKFGNVNRNDFYGTQQAISPSIRQAYTEYVRNRLQEPLQGLKKRIVLVSNGIL 120 Query: 127 RQEAQSGFAALSSDVAS-RPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAG 185 +Q+AQS ++A+S +VA PLCSL FWG DQL+P IE +LFD+ LLL KGKSDLR ALAG Sbjct: 121 KQDAQSDYSAISKEVAEFSPLCSLDFWGMDQLSPYIEEYLFDDALLLGKGKSDLRAALAG 180 Query: 186 LENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKN 245 LE++ + F RFV +C ED++ S +TR RF KR AAA MGWAVLLVWG +E N Sbjct: 181 LEDTQASFSRFVRFVDDCMAPLEDDMGVSVNTRANRFYKRAAAAGMGWAVLLVWGESECN 240 Query: 246 EKPGVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLMNRE 305 +KPGV+ GE+L L LWSE++ G Q D +F +R + + ++ LL Y+ + L+NR Sbjct: 241 QKPGVLAGEYLLLRLWSESITLGLQADSQFLKRFETLAQLHANSLLRYYERLMPSLLNRR 300 Query: 306 AVLRHRPERILYADLIFEEMGRLATLLLLLQKFSEFSEYVPRVMQLTVHLVNAHTGCRLP 365 +LR+RP+++LY DL+ +E+GRL T LLLLQ E + + V +N H GC LP Sbjct: 301 RMLRYRPDQVLYIDLVCDELGRLGTTLLLLQALKANPETLRAMHGCLVSFINTHNGCLLP 360 Query: 366 VYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYALNRNQYLPVDTDLLDDAIALN 425 VYDGQAID+S+ + A L + L + +DR AL RN +PVDTD LDDA+AL Sbjct: 361 VYDGQAIDLSIAMIAILAVGDKVSTKLLVNECIDRFDIALQRNSIMPVDTDDLDDAMALF 420 Query: 426 ITKTAKPRDFFKTSTLIPALGTIASLLDSDATMRLLNEDIQPALKGVTLERWYPQIALET 485 + FFKT+TL+P LGT+A+LL ++ L I P L+GVT ERW+PQ ALET Sbjct: 421 AGNEIQRSRFFKTTTLVPLLGTMAALLGDHESLDQLTAKIVPKLEGVTKERWFPQKALET 480 Query: 486 MTGSKQSIYDVGISRAIAGFPSSTVEERVSSLRVVKDAASPADFKWHNN-WQVLVALSAR 544 +T S + VGISRA+ GF + EE +SL+V AASP DF WHN W+VL+A+SAR Sbjct: 481 LTSSDAYVNAVGISRALTGFRQTPDEEIEASLKVPSHAASPEDFAWHNTPWEVLMAISAR 540 Query: 545 LHRHPLPTWYLA 556 LHRHPLPTWYLA Sbjct: 541 LHRHPLPTWYLA 552 >ref|YP_001358916.1| hypothetical protein SUN_1609 [Sulfurovum sp. NBC37-1] dbj|BAF72559.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 552 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 147/561 (26%), Positives = 263/561 (46%), Gaps = 38/561 (6%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIAEDGTET 68 ++L++ YLS LKE ELD+L+PELL AMGH V+S+PQ+GV Q GVDV S DG E Sbjct: 1 MKLIIKEYLSLLKESKELDSLIPELLLAMGHEVISKPQIGVRQYGVDVASVAKDSDGVEK 60 Query: 69 VFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGELRQ 128 VFLF IK GD R+D +G QA+ PS+ E + ++ ++ + Q K IVL + G+ +Q Sbjct: 61 VFLFTIKEGDFGRADWDNGLQAVRPSLNEIIDSYIPKKLSSDTQKLVKKIVLATGGDKKQ 120 Query: 129 EAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGLEN 188 E + + FWG D+L +E ++F+E ++ ++ +S R LA + + Sbjct: 121 EIDDNWNGYIEKNSIENKIEFEFWGGDKLALFVEEYIFNEYIIPAEQRSLFRKTLALIGD 180 Query: 189 SDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKNEKP 248 D + + +F+ + E T +D K+ LK + ++ W NE N K Sbjct: 181 IDYDLSDYYQFLNEILFNNKLE-TLND----KKILKSLRLIFLSLNIIDFWAENEDNLKK 235 Query: 249 GVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLMNREAVL 308 + E L ++ +N Q+ + + + K + +YF K + ++ + Sbjct: 236 SLYASEKTLLNVYQFLNKNNLQKKKHLKEMFNKLYKKHLDIQKKYFKKIYLAIEVKQGLS 295 Query: 309 RHRPERILYADLIFEEMGRL--------ATLLLLLQKFSEFSEYVPRVMQLTVHLVNAHT 360 + + + + ++FE++G + A+ ++ EY + ++ + Sbjct: 296 LYGHDFLQESIVLFEQLGIMSLYGNFYYASFFNKSDNSLDYIEY-KNIKDAIKLMIENNK 354 Query: 361 GCRLPVYDGQAIDVSLLISAWLGCAAWSQAEAL---TFDIVDRLGYALNRNQYLPVDTDL 417 G PVY+ ID+SL + W++ + + +D++ + +A R Y P++T+ Sbjct: 355 GLLNPVYEEHIIDISLALHL---LELWNETKFIDKWMYDLLSHIDFAYQRGSYFPINTNN 411 Query: 418 LDDAIALNITKTAKPRDFFKTSTLIPALGTIASLLDSDATMRLLNEDIQPALKGVTLERW 477 +D + LNI +T + ++ TS L+P L L + + + K TL+ W Sbjct: 412 FEDLVELNIGETKEKNEYITTSILLPTLAFWCVKLGLLENYKYIVHLSKEMYKESTLQVW 471 Query: 478 YPQIALETMTGSKQSIYDVGISRAIAG--FPSSTVEERVS------SLRVVKDAASPADF 529 +P +KQ IY + + +G F ++E +S L V K+ D Sbjct: 472 FPD------KDTKQFIY-IEKASVESGYVFAPIQIKENISEFAEMIELLVNKNYLIDLD- 523 Query: 530 KWHNNWQVLVALSARLHRHPL 550 +NN+ + +S+R R PL Sbjct: 524 --NNNFPIFYLVSSRHFRVPL 542 >ref|YP_003750563.1| hypothetical protein RPSI07_mp1646 [Ralstonia solanacearum PSI07] emb|CBJ35965.1| conserved hypothethical protein [Ralstonia solanacearum PSI07] Length = 574 Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 146/562 (25%), Positives = 243/562 (43%), Gaps = 21/562 (3%) Query: 8 SIQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIAEDGTE 67 S++L+L ++L ++E ELD LP L+ AMGH V+ RPQ G Q GVD+ S DG Sbjct: 4 SLRLLLEDFLGLMREEGELDVFLPLLMSAMGHEVVYRPQKGPRQYGVDITSVGPDSDGQT 63 Query: 68 TVFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGELR 127 +FL+++K GD+ RSD +G Q++ S+ + + ++R+ I + + +++V+NG+ Sbjct: 64 KLFLWLVKCGDIGRSDWDTGPQSVRQSINDVGDIYLRSHIAPEHKTLKRKLLIVTNGDFS 123 Query: 128 QEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGLE 187 AA D + R + +L ER L DE +L S +S LR LA Sbjct: 124 ANLNETIAAFLEDWSRRKKVATEQVNGSKLAAWTERFLLDEYILPSSNRSLLRRMLANAS 183 Query: 188 NSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKNEK 247 + ++ + R + + + + KR L VL VW NE+N Sbjct: 184 SPELCVMVGRRLINEMLSSTVAPAKTAGA-QTKRLLTGLRGIRTTLRVLSVWAANEENLL 242 Query: 248 PGVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLMNREAV 307 + ++ L +WS+ D E R +L V Y + + ++A Sbjct: 243 APYILSQYAVLAVWSKLYGRFQTGDAEASREFSELLFQLASVAEVYHRRMDPYYVVQDAF 302 Query: 308 LRHRPERILYADLIFEEMGRLATLLLLLQKFSEF-----SEYVP-RVMQLTVHLVNAHTG 361 P+ +L + +F+E+GRL ++ SE+V R LV +H+ Sbjct: 303 ADVLPDSVLVSRTVFDEIGRLGQQGCFWAFYAALNNHTDSEHVALRYANRVQALVQSHSC 362 Query: 362 CRLPVYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYALNRNQYLPVDTDLLDDA 421 LP YD + V I + A + R+ YA + ++LP+ L++A Sbjct: 363 SALPAYDYHSTGVHAAILLLVVTGQHDFARTWVQSLCQRMHYATSIRKFLPMSA-FLEEA 421 Query: 422 IALNITKTAKPRDFFKTSTLIPALGTIASLLDSDATMRLLNEDIQPALKGVTLERWYPQI 481 I + ++F TSTL+P L T + L D + L ED+ P L G T W + Sbjct: 422 IWVRHGYEQMEQEFCSTSTLVPILLTWTAALAMDDGYKFLREDVVPRLNGATPNFWSAEG 481 Query: 482 ALETMTGSKQSIYDVGISRAIAGFPSSTVEERVSSLRVVKDAASPADFKWHNNWQVLVAL 541 + + + ++ GI A+ F EE LR++ + + D + W Sbjct: 482 GYDAVVADPNAFHEHGIGEAVKQFH----EEPREFLRLMSEGLAGVDHIEQSAW-----Y 532 Query: 542 SARLHRHPLPTWYLAAKHQEGK 563 R PL LAA H +G+ Sbjct: 533 QVRAPYIPL----LAALHWQGQ 550 >ref|ZP_04852695.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] gb|EES73364.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 564 Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 135/559 (24%), Positives = 253/559 (45%), Gaps = 32/559 (5%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCI-AEDGTE 67 ++L++ YLS L+E +ELD LLP+LL +M + +PQ GV Q GVD + I ED E Sbjct: 11 MRLIVREYLSMLRESNELDNLLPDLLLSMDIQPIFKPQRGVRQYGVDQSAIGIDPEDQRE 70 Query: 68 TVFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGELR 127 +FLF+IK D+ R++ +G QA+ P++ E + ++R+ + ++ PK IV+ +NG+++ Sbjct: 71 KLFLFVIKQKDIDRNNWDTGPQAVRPTLNEIFDVYMRSMLDDRFRDLPKKIVICTNGDMK 130 Query: 128 QEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGLE 187 Q+ + +D + FWG D L+ L+ R+L +E ++ + +R LA L+ Sbjct: 131 QDVAINWINYINDHSVVGKIEFDFWGGDVLSSLVVRYLLNEFVIPESLQKQMRKTLAFLD 190 Query: 188 NSDMAIRSFARFVANCFDKPEDEVTASDSTR-KKRFLKRCAAAAMGWAVLLVWGRNEKNE 246 + + F V +E+ +D+ + + + LK + + ++ W R +N Sbjct: 191 LVEYDLSHFYEMV--------EEILFNDTLQSQNKPLKILRSLHLCLNLVYHWSREARNL 242 Query: 247 KPGVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLMNREA 306 K V E + L +W + G +++ + + + + ++ EY K + R+ Sbjct: 243 KHAVFAAERVILRMWEWIHQEGLKDNKKLWEIFFAIDETRRQINNEYLDKILPHCLVRDG 302 Query: 307 VLRHRPERILYADLIFEEMGRLATLLLLL-------------QKFSEFSEYVPRVMQLTV 353 + + ERI Y L+FE++G +A++ L F E ++ V+Q Sbjct: 303 LSGYGSERIEYPLLVFEQIGIIASIGLDFVYAEDSLGQDEPNDHFQEVAQKAAYVLQ--- 359 Query: 354 HLVNAHTGCRLPVYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYALNRNQYLPV 413 L+ + R PVYD ++S + + + +G P+ Sbjct: 360 KLIQNNNISRFPVYDSHVNEISTALILLYRTNQLGATKTWINQLFVHIGRGYQLLGRFPL 419 Query: 414 DTDLLDDAIALNI-TKTAKPRDFFKTSTLIPALGTIASLLDSDATMRLLNEDIQPALKGV 472 +D DD I + + ++A+P +STL+P L +LD + I K V Sbjct: 420 LSDSYDDLIEVELGLQSAEP----SSSTLLPILLEWTVVLDVPEQYVQARDMIHQIFKNV 475 Query: 473 TLERWYPQIALETMTGSKQSIYDVGISRAIAGFPSSTVEERVSSLRVVKDAASPADFK-W 531 L+ W+P E +++D G P S + R +K+ +F + Sbjct: 476 DLQIWFPDELSEKHMFKSNALFDSGAMLTTIKLPESFEQYRAMVCEEMKEIMEKVEFSFF 535 Query: 532 HNNWQVLVALSARLHRHPL 550 ++ ++ LS R R P+ Sbjct: 536 EESFPIMGILSFRHFRTPV 554 >ref|ZP_08486810.1| hypothetical protein MetalDRAFT_3536 [Methylomicrobium album BG8] gb|EGL02267.1| hypothetical protein MetalDRAFT_3536 [Methylomicrobium album BG8] Length = 568 Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 124/523 (23%), Positives = 231/523 (44%), Gaps = 40/523 (7%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCI-AEDGTE 67 ++LV++ YL LKER ELD LLP+LL MG+ ++RPQ G Q GVD+ + E G + Sbjct: 1 MKLVIAEYLRTLKERDELDRLLPDLLVEMGYVTVARPQTGNRQYGVDIAARGKNPETGID 60 Query: 68 TVFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGELR 127 + L ++K GD+ R + QA+ S+ + + ++++ ++ Q+ IV+ ++GEL+ Sbjct: 61 ELLLLVVKQGDIGRPEWDGNSQAVYQSINDIFHVYLKSHLEPQDQSRSIRIVVATSGELK 120 Query: 128 QEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGLE 187 Q Q ++ +D ++ + + FWG D + LIE+HL DE + + + DLR ALA Sbjct: 121 QTVQPSWSGFVTDNQAKAI--IEFWGADAIATLIEKHLLDEHIFHDEDRRDLRRALALSG 178 Query: 188 NSDMAIRSFARFV---------ANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLV 238 +S+ R R DKP+ T + R + A A W + Sbjct: 179 DSEYDRRDLHRLFMRTLDLNNKGQLIDKPK---TGKALLKALRIVNLSAQAFAHWTL--- 232 Query: 239 WGRNEKNEKPGVVTGEFLALYLWSEAVRNGFQEDDEFQRR------LDNVLKIQTRVLLE 292 ++ + + G++ E L+ W Q DE R+ + + R + Sbjct: 233 --GDDGDTRQGLLAVERAMLWSWHR-----IQLADEKNRKDAIAEPFNMIWWGYYRFASQ 285 Query: 293 YFAKSAQQLMNREAVLRHRPERILYADLIFEEMGRLATLLLLLQKFSEFSEYVPRVMQLT 352 YFA+ ++ R+ + + + FE++G LA++ L L +E Sbjct: 286 YFARIQPHCFVENSLTRYTSNGVESSLIAFEQIGILASIALFLGFHPIATEEEKNYWSCN 345 Query: 353 VHLVNAHTGCRL--------PVYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYA 404 ++V L P D + D++L + A +G A+ + + YA Sbjct: 346 ANVVADALEAWLQNNGVSTSPCLDRHSQDITLAMFALIGMGRAEAAKKWLRKLFRNVDYA 405 Query: 405 LNRNQYLPVDTDLLDDAIALNITKTAKPRD-FFKTSTLIPALGTIASLLDSDATMRLLNE 463 +++P+ TD LDD + + D + S ++ + + +L D +L + Sbjct: 406 YKAKKFVPIATDSLDDMVEEGGWLGGQASDRMLEMSWMLATIAGWSVILGMDELYEMLAK 465 Query: 464 DIQPALKGVTLERWYPQIALETMTGSKQSIYDVGISRAIAGFP 506 + + V ++ W+P+ L +Q+ + G++ A P Sbjct: 466 NAKDDYPNVCIQLWHPEKDLYQHLYFRQAHFKSGVAEAPIQLP 508 >ref|YP_004488910.1| hypothetical protein DelCs14_3563 [Delftia sp. Cs1-4] gb|AEF90555.1| hypothetical protein DelCs14_3563 [Delftia sp. Cs1-4] Length = 573 Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 24/488 (4%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIA-EDGTE 67 ++L++S +L L+ER E D LLP+LL AMG+ L++PQ GV Q GVD+ + + DG + Sbjct: 1 MRLIISQFLRTLRERDEFDRLLPDLLLAMGYIPLAKPQTGVRQYGVDLAAVGKSLVDGMD 60 Query: 68 TVFLFIIKFGDVKRSDLYSGD-QAIAPSVREACNDFVRNRIQAPLQNN-PKHIVLVSNGE 125 + L +IK GD+ R D +G+ ++ PS+ E + ++ R+ P N K I+L + G+ Sbjct: 61 EMLLLVIKQGDLGRRDWDNGEPTSVRPSLNEVLDVYL-TRLVPPEHNGLRKTIILATTGD 119 Query: 126 LRQEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAG 185 L+Q+ + + A A++ S FWG D+++ L+ER+L DE L +SDLR +LA Sbjct: 120 LKQDVEMNWTAFKELNATK--ASFDFWGADRVSDLVERYLLDENLFAPSDRSDLRKSLAL 177 Query: 186 LENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKN 245 + + F R + D A K+ K A + + W + + + Sbjct: 178 AADPEYEFSDFNRLLLRQLDLTAAGKAAKPDIDLKQLQKAFRRAHLAAQICARWAQVDGD 237 Query: 246 EKPGVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLMNRE 305 + + E + L+ W + +F + + + Y A R+ Sbjct: 238 SRQALWINERILLWAWHRVQLLDADDRSKFYPSIAGMWDSYIQAAARYLEVIAPHYHVRD 297 Query: 306 AVLRHRPERILYADLIFEEMGRLATLLL---LLQKFSE-----FSEYVPRVMQLTVHLVN 357 + + E +A ++FE +G + T+ L L Q ++ V + L+ Sbjct: 298 GMAGYGSEGAAFAIVLFEHIGLIGTVGLACRLKQGINDEDNATIKANVSAIADGLCALIK 357 Query: 358 AHTGCRLPVYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYALNRNQYLPVDTDL 417 H P D ID+SL ++ + +AE +I RL Y P+ +D Sbjct: 358 NHGASASPRLDRHIIDISLALTFLILAERRQEAETWVAEIAKRLDYCFRARAKFPIASDS 417 Query: 418 LDDAIALNITKTAKPRD------FFKTSTLIPALGTIASLLDSDATMRLLNEDIQPALKG 471 L+D + + + P+D +TS + + +LD L++ + K Sbjct: 418 LEDLVEVEVN----PKDVSLVQKLMRTSWSLATVAAWCVILDLREHYAALSQGVAGPYKE 473 Query: 472 VTLERWYP 479 V + W+P Sbjct: 474 VCAQLWHP 481 >ref|ZP_03530641.1| hypothetical protein RetlC8_30128 [Rhizobium etli CIAT 894] Length = 458 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 119/445 (26%), Positives = 199/445 (44%), Gaps = 38/445 (8%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTC--IAEDGT 66 ++LV+++YL L+ER ELDA+LP LL G VL+RP+ G Q GVD+ + DG Sbjct: 1 MKLVVTHYLRSLRERDELDAILPALLSESGFQVLTRPRRGTRQAGVDIAAVGPDADRDGA 60 Query: 67 ETVFLFIIKFGDVKRSDLYSGDQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGEL 126 ++FLF IK GD+ R + QA+ PS+ E +D++ NRI L P + + GE+ Sbjct: 61 RSLFLFTIKSGDLTREHWDASQQAVRPSLNEVMDDYIPNRIPPHLAELPVVVCVCMGGEM 120 Query: 127 RQEAQSGFAALSSDVASRPLCSLHF--WGTDQLTPLIERHLFDEVLLLSKGKSDLRTALA 184 R++ ++ ++ + +LHF W D+L LI + L+ S+ + + ALA Sbjct: 121 REDVRAQWSGFCR---TNEKANLHFAEWNGDRLADLILSGMLRAELVESEHRGLFQKALA 177 Query: 185 GLENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEK 244 L+ D+A R F + F +P+++ ++ TR+ R C W +L VW R+ Sbjct: 178 MLDQPDVAYRHFRHLLNAIFTEPKNQ---TERTRQLRKAYLCL-----W-ILFVWARDAG 228 Query: 245 NEKPGVVTGEFLALYLWSEAVRNGFQEDDEFQRRL---DNVLKIQTRVLLEYFAKSAQQL 301 N + E L L W ++ Q RL D VLK+ + + Sbjct: 229 NLEAAYRASELLLLRSWPHCDSTHLRKGPTRQERLAHFDQVLKLHFIIAHLLLVEKIGPF 288 Query: 302 MNREAVLRHRPERILYADL---IFEEMGRLATLLLLLQKFS---------EFSEYVPRVM 349 ++ L D+ +FE +GRL+ L L S SE +++ Sbjct: 289 ADKRYALSMAVNSRNAVDINIALFETLGRLSLHGLWLDALSGMQDEAFAQAMSEQADKLL 348 Query: 350 QLTVHLVNAHTGCRLPVYDGQAIDVSLLISAWLGCAAWSQAEALTFDIVDRLGYALNRNQ 409 + + ++NA+ +P+ D I+++L + S + D L L Q Sbjct: 349 NIAIAMLNANPALAVPIRDDFMIELALFMRLADVRGRISNVADYIRGMSDHLCNGLRIRQ 408 Query: 410 YLPVDTDLLDDAIALNITKTAKPRD 434 + P+ T D + + PRD Sbjct: 409 HYPIPTTNYRDVL-------SHPRD 426 >ref|YP_204510.1| hypothetical protein VF_1127 [Vibrio fischeri ES114] gb|AAW85622.1| hypothetical protein VF_1127 [Vibrio fischeri ES114] Length = 584 Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 139/595 (23%), Positives = 258/595 (43%), Gaps = 40/595 (6%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIAEDGTET 68 ++LV+ YL+ LKER ELDALLP+LL +G V +P VG Q GVDV + + +E+ Sbjct: 1 MKLVIRQYLASLKERGELDALLPDLLSQIGLEVFLKPGVGSRQYGVDVGAFGKLSNESES 60 Query: 69 -VFLFIIKFGDVKRSDLYSGD-QAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGEL 126 V+LF +K GD+ R D S + Q + PS+ E + F+ RI A P + L GE+ Sbjct: 61 KVYLFSVKSGDLNRRDWDSTNPQDLRPSINEIIDVFIPTRIPAEYNECPVEVCLCFGGEV 120 Query: 127 RQEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGL 186 ++E +S + + + L S W D+L L+E+H+ E LL +S LR +LA + Sbjct: 121 KEEVRSNVSMFLGKLKTDDL-SFSEWNGDRLADLVEQHMLREELLPKNCRSLLRKSLAMI 179 Query: 187 ENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKNE 246 + +++ + F++ + +T +D + K L + +L W R+E N Sbjct: 180 DEPEVSFKHFSQLAIS--------LTCTDDKKPKDILTGMRQLYLCLWILYSWCRDEDNL 231 Query: 247 KPGVVTGEFLALYLWSEAVRNGFQEDDEFQ----RRLDNVLKIQTRVLLEYFAKSAQQLM 302 + ++ EF L W EA + F + ++ LD++L++ +V +Y + Sbjct: 232 ESAFLSAEFTMLNSW-EAAKFAFGKKNKVAVSTLTTLDSILRLNLQVSNQYIDEKIIPYC 290 Query: 303 NREAVLRHRPERILYADL---IFEEMGRLA-----TLLLLLQKFSE-------FSEYVPR 347 N + H + D+ +F+ +GRLA + L Q E FSE V + Sbjct: 291 NNLYAISHAVKPSCATDVNLKLFDVLGRLALTGCWSYWYLSQINDENVEAGKFFSEAVTK 350 Query: 348 VMQLTVHLVNAHTGCRLPVYDGQAIDVSLLISAW---LGCAAWSQAEALTFDIVDRLGYA 404 L+ + P D QAID L+++ W L W + ++ + Sbjct: 351 YQDSIKQLIVNNPILFTPYKDEQAID--LVLALWFLSLDHKHWRDINSWLSNMSREIYQM 408 Query: 405 LNRNQYLPVDTDLLDDAIALNITKTAK-PRDFFKTSTLIPALGTIASLLDSDATMRLLNE 463 N P + I + KT + + K S L P + ++++ ++ + Sbjct: 409 FKINDKYPTTIRSYAELIEHPVDKTDEYKKSVTKGSILYPYISIFSAIMGFSEPYEIVKK 468 Query: 464 DIQPALKGVTLERWYPQIALETMTGSKQSIYDVGISR-AIAGFPSSTVEERVSSLRVVKD 522 + L + ++ + E I+ +S + P +++ V Sbjct: 469 IKEEFLPHCNFQVYFLDESSEDHFYRFDKIHGATLSDVCVTEEPGELIKQLVGECDQSNK 528 Query: 523 AASPADFKWHNNWQVLVALSARLHRHPLPTWYLAAKHQEGKKLEATAVHASSTIE 577 + F+ ++ W +++ R +R P+P ++ +++ K+ E + + E Sbjct: 529 VYDMSAFQ-YSFWPIILT-GCRHYRLPVPMHFIIDIYKQRKEQEEIETDSGKSTE 581 >ref|ZP_06355787.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220] gb|EFE06339.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220] Length = 574 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 148/592 (25%), Positives = 249/592 (42%), Gaps = 72/592 (12%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTCIAEDGTET 68 ++L++ YLS LKER ELD +LP LL MG +V +RP G + GVD+ + E Sbjct: 1 MKLIIKQYLSSLKERSELDVILPSLLSQMGLNVFARPIRGTNEYGVDIAAVGKINQDKEC 60 Query: 69 VFLFIIKFGDVKRSDLYSG--DQAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGEL 126 V+LF +K G++ RS +SG DQ + PS+ + ++ +R+ +N P I L G++ Sbjct: 61 VYLFSVKSGNLTRSTWHSGATDQTLRPSLESILDSYIPHRLPPEHKNKPVVICLCFGGDI 120 Query: 127 RQEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGL 186 + + ++ + + S W D+L+ LI +L +E LL +S LR ++A L Sbjct: 121 QTNVRQEVTGFTNKYTTDNI-SFEEWNGDKLSDLITEYLLNEDLLPKNWQSLLRKSIALL 179 Query: 187 ENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKNE 246 + + ++F + V + D + RF+ W +L W R+E N Sbjct: 180 DEPTSSHQNFRKLVLEI-----SKTIGEDDKSQVRFINTINICL--W-ILYSWCRDENNI 231 Query: 247 KPGVVTGEFLALYLWSEAVRNGFQEDDEFQRRLDNVLKIQTRVLLEYFAKSAQQLM-NRE 305 + ++ E LY+W +A+ F + D ++ ++ EY K N Sbjct: 232 ESAYISAESAILYVW-DAINKNFTLKQ--KNSFDELISTYQKISEEYVQKCILPFCKNLH 288 Query: 306 AVLRHRPERILYADL---IFEEMGRLAT----LLLLLQKFS--------------EFSEY 344 A+ R R DL +F+ +GR+A LL LQK E Sbjct: 289 AISRAINTRC-SIDLNIKLFDILGRVAIHAEWLLYRLQKSHIEFPPSEGENQEQLEIRNQ 347 Query: 345 VPRVMQLTVHLVNAHTGCRLPVYDGQAIDVSLLISAWLGCAAWSQAEALTFD----IVDR 400 + R+ + LV+ + P D QAID+SL L S + D + DR Sbjct: 348 IERISKTIQELVSKNPLLLSPYKDDQAIDISLAAHILLQN---SNNDVFLQDWIKNLADR 404 Query: 401 LGYALNRNQYLP---VDTDLLDDAIALNITKTAKPRDFFKT-----STLIPALGTIASLL 452 + +A ++P + T L + + K + + S L PAL +A L Sbjct: 405 IMFAY--KAHIPSIYMHTTTLRNYEEILEYKNDDNHELLREKYTQGSILYPALMILAETL 462 Query: 453 DSDATMRLLNEDIQPALKGVTLERWYPQIALETMTGSKQSIYDVGISRAIA----GFPSS 508 + L E LK TL+ W+P E+ + + I+ S P Sbjct: 463 KNSELKADLVEFCTENLKHCTLQYWFPNHTSESYYYNNKEIHGSAFSEITETQYFSIPDI 522 Query: 509 TVEERVSS---LRVVKDAASPADFKWHNNWQVLVALSARLHRHPLPTWYLAA 557 +E + SS L +K +P L+ +++R +R+P+P + A Sbjct: 523 LLECKSSSIDNLSAIKYGYAP-----------LLLVASRHYRYPVPLHFFTA 563 >ref|ZP_08411631.1| hypothetical protein PH505_ee00040 [Pseudoalteromonas haloplanktis ANT/505] gb|EGI71247.1| hypothetical protein PH505_ee00040 [Pseudoalteromonas haloplanktis ANT/505] Length = 579 Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 113/391 (28%), Positives = 185/391 (47%), Gaps = 31/391 (7%) Query: 9 IQLVLSNYLSGLKERHELDALLPELLKAMGHSVLSRPQVGVGQGGVDVMSTC-IAEDGTE 67 ++L++ YL+ LKER ELDALLP+LL MG V +P VG Q GVDV + + + Sbjct: 1 MKLMIRQYLASLKERGELDALLPDLLSQMGLEVFLKPGVGSRQYGVDVGAFGKLPNESHS 60 Query: 68 TVFLFIIKFGDVKRSDLYSGD-QAIAPSVREACNDFVRNRIQAPLQNNPKHIVLVSNGEL 126 V+LF +K GD+ R D S + Q + PS+ E + F+ R+ A P I L GE+ Sbjct: 61 KVYLFSVKSGDLDRRDWDSTNPQDLRPSINEIIDVFIPTRVPAEYNEYPVEICLCFGGEV 120 Query: 127 RQEAQSGFAALSSDVASRPLCSLHFWGTDQLTPLIERHLFDEVLLLSKGKSDLRTALAGL 186 ++E ++ + + + L S W D+L LIE+++ E LL + LR +LA L Sbjct: 121 KEEVRANVSMFLGKLKADDL-SFSEWNGDRLADLIEQNMLREELLPKNCRGLLRKSLAML 179 Query: 187 ENSDMAIRSFARFVANCFDKPEDEVTASDSTRKKRFLKRCAAAAMGWAVLLVWGRNEKNE 246 + +++ + F++ + +T +D + K L + +L W R+E N Sbjct: 180 DEPEVSFKHFSQLAIS--------LTCTDDKKPKDILTGIRQLYLCLWILYSWCRDEDNL 231 Query: 247 KPGVVTGEFLALYLWSEAVRNGFQEDDEFQ----RRLDNVLKIQTRVLLEYFAKSAQQLM 302 + ++ EF L W EA + F + ++ LD++LK+ +V +Y Sbjct: 232 ESAFLSAEFTMLNAW-EAAKFAFAKKNKVAVSTLTTLDSILKLNLQVSNQYIEDKILPYC 290 Query: 303 NREAVLRHRPERILYADL---IFEEMGRLAT--------LLLLLQKFSE----FSEYVPR 347 N L H D+ +F+ +GRLA L L+ ++ +E FSE V + Sbjct: 291 NSLYALSHAVNPSCATDVNLKLFDVLGRLAITGCWSYWYLSLVSEENAEAGKFFSEAVTK 350 Query: 348 VMQLTVHLVNAHTGCRLPVYDGQAIDVSLLI 378 L+ ++ P D QAID+ L I Sbjct: 351 FQDSIKQLIVSNPILFTPYKDEQAIDLVLAI 381