BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0162.p (262 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776607.1| hypothetical protein Hsero_3217 [Herbaspiril... 525 e-147 ref|YP_002379978.1| fibro-slime family protein [Cyanothece sp. P... 193 2e-47 ref|ZP_01907377.1| Periplasmic protein TonB links inner and oute... 174 1e-41 ref|ZP_01216180.1| hypothetical protein PCNPT3_09064 [Psychromon... 172 6e-41 ref|ZP_01216181.1| hypothetical protein PCNPT3_09069 [Psychromon... 170 2e-40 ref|ZP_08402136.1| fibro-slime family protein [Rubrivivax benzoa... 165 6e-39 ref|ZP_01308283.1| hypothetical protein RED65_07539 [Oceanobacte... 164 1e-38 ref|YP_001613924.1| hypothetical protein sce3285 [Sorangium cell... 154 2e-35 ref|YP_001619758.1| fibro-slime domain-containing protein [Soran... 154 2e-35 ref|YP_528422.1| periplasmic protein TonB links inner and outer ... 153 3e-35 >ref|YP_003776607.1| hypothetical protein Hsero_3217 [Herbaspirillum seropedicae SmR1] gb|ADJ64699.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 263 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 259/261 (99%), Positives = 259/261 (99%) Query: 1 MRAKSLLGGALLAGLMSLSTAHANTITLTGTVRDFNSYGTTFNGVAGHPDFESHVSDDRG 60 MRAKSLLGGALLAGLMSLSTAHANTITLTGTVRDFNSYGTT NGVAGHPDFESHVSDDRG Sbjct: 1 MRAKSLLGGALLAGLMSLSTAHANTITLTGTVRDFNSYGTTHNGVAGHPDFESHVSDDRG 60 Query: 61 IVKSTLGADGKPVYNSADYNPTVSSAASFYQWYHDDASVNRTGSVSINLNQIGPNLYQYS 120 IVKSTLGADGKPVYNSADYNPTVSSAASFYQWYHDDASVNRTGSVSINLNQIGPNLYQYS Sbjct: 61 IVKSTLGADGKPVYNSADYNPTVSSAASFYQWYHDDASVNRTGSVSINLNQIGPNLYQYS 120 Query: 121 SNSFFPIDNQLLAQTTMGHNFGFTTEWHTQFTYNSAANSNFTFKGDDDVGVFINGKLAID 180 SNSFFPIDNQLLAQTTMGHNFGFTTEWHTQFTYNSAANSNFTFKGDDDV VFINGKLAID Sbjct: 121 SNSFFPIDNQLLAQTTMGHNFGFTTEWHTQFTYNSAANSNFTFKGDDDVWVFINGKLAID 180 Query: 181 LGGVHGEETASVDLNSFAAGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPE 240 LGGVHGEETASVDLNSFAAGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPE Sbjct: 181 LGGVHGEETASVDLNSFAAGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPE 240 Query: 241 PATLGLMGLGLFGLVAARRRR 261 PATLGLMGLGLFGLVAARRRR Sbjct: 241 PATLGLMGLGLFGLVAARRRR 261 >ref|YP_002379978.1| fibro-slime family protein [Cyanothece sp. PCC 7424] gb|ACK73110.1| fibro-slime family protein [Cyanothece sp. PCC 7424] Length = 256 Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 109/227 (48%), Positives = 139/227 (61%), Gaps = 20/227 (8%) Query: 21 AHANTITLTGTVRDFNSYGTTFNGVAGHPDFESHVSDDRGIVKSTLGADGKPVYNSAD-- 78 A+T+TL+GT+RDFN HPDFE ++ ++GIV+S LGAD KPVY D Sbjct: 24 VQASTLTLSGTIRDFND---------SHPDFEDAIATEKGIVQSILGADKKPVYAKGDGS 74 Query: 79 YNPTVSSAASFYQWYHDDASVNRTGSVSINL-NQIGPNLYQYSSNSFFPIDNQLLAQTTM 137 +PT S +F QWY D VN + ++ I L + G +Y Y++++FFPIDNQL Sbjct: 75 TSPTTSGEENFNQWYRDVPGVNLSSTLDITLTDDDGDGIYTYTNSNFFPIDNQLFGNQGR 134 Query: 138 GHNFGFTTEWHTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSF 197 HNF FT E H++FTY FTF GDDDV VFIN +L IDLGGVH +T SV L++ Sbjct: 135 NHNFHFTYEIHSKFTYQGG--ETFTFIGDDDVWVFINNQLVIDLGGVHPAQTGSVALDTL 192 Query: 198 AAGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPEPATL 244 G+ G TY +F AERHT+ SNF + TSLA P VPEP TL Sbjct: 193 ----GLTEGETYNFALFFAERHTTQSNFKIQTSLAFEP--VPEPLTL 233 >ref|ZP_01907377.1| Periplasmic protein TonB links inner and outer membranes-like protein [Plesiocystis pacifica SIR-1] gb|EDM79682.1| Periplasmic protein TonB links inner and outer membranes-like protein [Plesiocystis pacifica SIR-1] Length = 330 Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/205 (45%), Positives = 121/205 (59%), Gaps = 11/205 (5%) Query: 27 TLTGTVRDFNSYGTTFNGVAGHPDFESHVSDDRGIVKSTLGADGKPVYNSADYNPTVSSA 86 TL TVRDF HPDF+ D GIV+ LGAD KPVY PT + Sbjct: 131 TLYATVRDFQ---------IAHPDFQYTTGVDLGIVEVDLGADQKPVYAGNPNTPTTTGV 181 Query: 87 ASFYQWYHDDASVNRTGSVSINLNQIGPNLYQYSSNSFFPIDNQLLAQTTMGHNFGFTTE 146 +F QWY+D VN+ V I L +I P +Y+Y++ +FFPID++ HN+ FT E Sbjct: 182 DNFNQWYNDVDGVNQPFEVPIELLEIMPGVYEYANGAFFPIDDEGWGNEGNPHNYHFTLE 241 Query: 147 WHTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNG 206 HT F Y FTF+GDDD+ VF+NGKL IDLGGVHG S+D+++ A G+ G Sbjct: 242 LHTNFLYTGG--EVFTFEGDDDLWVFVNGKLGIDLGGVHGPLEGSIDMDALAGQLGIEIG 299 Query: 207 GTYRLDIFQAERHTSGSNFTMTTSL 231 G Y LD F AERHT+ SNF +TT++ Sbjct: 300 GLYDLDFFFAERHTTQSNFKITTTI 324 >ref|ZP_01216180.1| hypothetical protein PCNPT3_09064 [Psychromonas sp. CNPT3] gb|EAS38965.1| hypothetical protein PCNPT3_09064 [Psychromonas sp. CNPT3] Length = 251 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 105/242 (43%), Positives = 135/242 (55%), Gaps = 19/242 (7%) Query: 23 ANTITLTGTVRDFNSYGTTFNGVAGHPDFESHVSDD-RGIVKSTLGADGKPVYNSADYNP 81 A ITL GTVRDF H DFES V G+V S LGA+GKPVY+ Sbjct: 22 AALITLGGTVRDFKQ---------SHSDFESTVDGHVTGLVSSQLGANGKPVYSGLSTPS 72 Query: 82 TVSSAASFYQWYHDDASVNRTGSVSINLNQ---IGPNLYQYSSNSFFPIDNQLLAQTTMG 138 S +F QWY+D+ VN++ S SI L+ PN+Y +S SFFPIDNQ Sbjct: 73 IYQSGVNFNQWYNDENGVNKSISHSITLDNSITADPNVYSFSDTSFFPIDNQGWGNEGNS 132 Query: 139 HNFGFTTEWHTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFA 198 HN+ FT E ++ FTY F+F GDDD+ VFING+L +DLGG+HG S+ L+S Sbjct: 133 HNYHFTYEINSNFTYQGG--EMFSFVGDDDLWVFINGQLVVDLGGIHGPRGQSISLDSL- 189 Query: 199 AGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPEPATLGLMGLGLFGLVAAR 258 G+N G Y D+F AERH GS F++ TS+ L V P TL +M +GL L + Sbjct: 190 ---GLNIGNNYTFDLFFAERHKHGSKFSIETSILLTSQPVDAPNTLFIMLMGLSLLFLVK 246 Query: 259 RR 260 R+ Sbjct: 247 RK 248 >ref|ZP_01216181.1| hypothetical protein PCNPT3_09069 [Psychromonas sp. CNPT3] gb|EAS38966.1| hypothetical protein PCNPT3_09069 [Psychromonas sp. CNPT3] Length = 251 Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 145/254 (57%), Gaps = 19/254 (7%) Query: 11 LLAGLMSLSTAHANTITLTGTVRDFNSYGTTFNGVAGHPDFESHVSDD-RGIVKSTLGAD 69 ++A L+ + ++A+ ITL GT+RDF H DFE + + G+V +TLG D Sbjct: 10 IVALLIFSAQSNASMITLGGTLRDFKQ---------SHSDFERAIDGNVTGMVDATLGGD 60 Query: 70 GKPVYNSADYNPTVSSAASFYQWYHDDASVNRTGSVSINLNQI---GPNLYQYSSNSFFP 126 GKPVY+ S +F QWY+D + VN++ S SINL+ PN+Y Y+++SFFP Sbjct: 61 GKPVYSGLSTASVYQSGVNFNQWYNDVSGVNQSLSYSINLDNTITADPNVYTYTNSSFFP 120 Query: 127 IDNQLLAQTTMGHNFGFTTEWHTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHG 186 +D HN+ FT E ++ FTY F+F GDDD+ VFING+L +DLGGVHG Sbjct: 121 MDGLGWGNEGNAHNYHFTYELNSNFTYQGG--EMFSFVGDDDLWVFINGQLVVDLGGVHG 178 Query: 187 EETASVDLNSFAAGAGMNNGGTYRLDIFQAERHTSGSNFTMTTSLALAPSNVPEPATLGL 246 SV+L+S AG N Y D+F AERH + SNF + TS+ L V P TL + Sbjct: 179 ASGQSVNLDSLGLVAGSN----YTFDLFFAERHKTQSNFRIDTSILLTSQPVDAPNTLFI 234 Query: 247 MGLGLFGLVAARRR 260 M +GL L +R+ Sbjct: 235 MLMGLSLLFLVKRK 248 >ref|ZP_08402136.1| fibro-slime family protein [Rubrivivax benzoatilyticus JA2] gb|EGJ10469.1| fibro-slime family protein [Rubrivivax benzoatilyticus JA2] Length = 249 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 100/234 (42%), Positives = 130/234 (55%), Gaps = 14/234 (5%) Query: 30 GTVRDFNSYGTTFNGVAGHPDFESHVSDDRGIVKSTLGADGKPVYNSADYNPTVSSAASF 89 GTVRDFN+ G F G ++ +G V+STL + + + A +F Sbjct: 27 GTVRDFNADGINFEGA---------LAAGQGYVQSTLSGASPTLTALGQSVISNTGAGAF 77 Query: 90 YQWYHDDASVNRTGSVSINLNQIGPNLYQYSSNSFFPIDNQLLAQTTMGHNFGFTTEWHT 149 WY + + S ++ L++ P LY YSSNSFFPID QLL HN+ FT T Sbjct: 78 DLWYTRPTA---SASYALVLDETSPGLYTYSSNSFFPIDGQLLGNEGRDHNYHFTYTIST 134 Query: 150 QFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNGGTY 209 F+Y A FTF GDDDV V+ + L IDLGGVHG ++ +V+L++ +GA GTY Sbjct: 135 TFSYLKGAGQEFTFTGDDDVWVYFDDLLGIDLGGVHGAQSQTVNLDALFSGANARESGTY 194 Query: 210 RLDIFQAERHTSGSNFTMTTSLALA--PSNVPEPATLGLMGLGLFGLVAARRRR 261 D F AERHT+ SN +TTSL P +VPEP TL L L L G+ AARRRR Sbjct: 195 SFDFFFAERHTTQSNLQITTSLVFDENPQDVPEPGTLALGVLALAGVGAARRRR 248 >ref|ZP_01308283.1| hypothetical protein RED65_07539 [Oceanobacter sp. RED65] gb|EAT11073.1| hypothetical protein RED65_07539 [Oceanobacter sp. RED65] Length = 245 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 86/204 (42%), Positives = 117/204 (57%), Gaps = 12/204 (5%) Query: 31 TVRDFNSYGTTFNGVAGHPDFESHVSDDRGIVKSTLGADGKPVY-NSADYNPTVSSAASF 89 +RDF HPDFE+ + DRGIVK+ LGADG+PVY N + PT SF Sbjct: 50 VIRDFKD---------SHPDFENMIGTDRGIVKNELGADGRPVYANPHTWTPTTHGEDSF 100 Query: 90 YQWYHDDASVNRTGSVSINLNQIGPNLYQYSSNSFFPIDNQLLAQTTMGHNFGFTTEWHT 149 QW+ + +VN + + + ++ P ++YS++ FFPI++ NF FT E H Sbjct: 101 NQWFRNVPNVNTAIPMQLEMVELSPGFWEYSNSDFFPINDMGFGNQGRDKNFHFTLETHL 160 Query: 150 QFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNGGTY 209 +F Y +F+FKGDDD+ +FINGKLAIDLGGVH + V L+ A G+ G TY Sbjct: 161 KFFY--VEGGSFSFKGDDDLWIFINGKLAIDLGGVHSVQEKVVHLDDIADELGIEPGNTY 218 Query: 210 RLDIFQAERHTSGSNFTMTTSLAL 233 D+F AERHT+ SNF T+ L Sbjct: 219 SFDLFFAERHTTESNFKFQTTFEL 242 >ref|YP_001613924.1| hypothetical protein sce3285 [Sorangium cellulosum 'So ce 56'] emb|CAN93444.1| hypothetical protein predicted by Glimmer/Critica [Sorangium cellulosum 'So ce 56'] Length = 298 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 28 LTGTVRDFNSYGTTFNGVAGHPDFESHVSDD-RGIVKSTLGADGKPVYNSADYNPTVSSA 86 L G VRDF ++ T GHPDFE+ + +GIV LG D KPVY + Sbjct: 90 LAGVVRDFKAFSTD----GGHPDFENFAGNGLKGIVAPELGPDDKPVYAHEGGTEHTTGP 145 Query: 87 ASFYQWYHDDASVNRTGSVSINLNQIGPNLYQYSSNSFFPIDNQLLAQTTMGHNFGFTTE 146 +FYQWYHDD +VN + L L +S + FFPID+Q HNFGFT E Sbjct: 146 EAFYQWYHDDPTVNVPIRYDVPLQVSESGLGLFSGDQFFPIDDQGWGNEGRVHNFGFTYE 205 Query: 147 WHTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNG 206 H F Y F F GDDD+ VFIN +LAID+GG+H +A ++L+++A G+ G Sbjct: 206 LHMTFDYQRGGV--FFFNGDDDLWVFINRRLAIDMGGLHSPTSALLELDAYAEALGIEVG 263 Query: 207 GTYRLDIFQAERHTSGSNFTMTTSLAL 233 Y LD F AER + + FTM TS Sbjct: 264 KEYPLDFFYAERRSGSAVFTMMTSFKF 290 >ref|YP_001619758.1| fibro-slime domain-containing protein [Sorangium cellulosum 'So ce 56'] emb|CAN99278.1| putative secreted protein with fibro-slime domain [Sorangium cellulosum 'So ce 56'] Length = 290 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/188 (45%), Positives = 110/188 (58%), Gaps = 4/188 (2%) Query: 48 HPDFES-HVSDDRGIVKSTLGADGKPVY-NSADYNPTVSSAASFYQWYHDDASVNRTGSV 105 HPDFE+ DRG+V++ LGADGKPVY ++ T + +F QW+ D VN + Sbjct: 99 HPDFEAGRFGSDRGLVEAQLGADGKPVYAGGSEGTRTTTGKEAFDQWFRDVPDVNTAVQI 158 Query: 106 SINLNQIGPNLYQYSSNSFFPIDNQLLAQTTMGHNFGFTTEWHTQFTYNSAANSNFTFKG 165 SI L G Y S+ FFPID+ HN+ FT E T+F Y FTF G Sbjct: 159 SIPLADSGNGTSTYDSSDFFPIDDMGFGNEDRSHNYHFTLELRTKFEYE--GGEVFTFSG 216 Query: 166 DDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNGGTYRLDIFQAERHTSGSNF 225 DDD+ FING LAIDLGGVH E+A++DL++ A G+ G +Y LD F AERHT+ SNF Sbjct: 217 DDDLFTFINGHLAIDLGGVHRPESATIDLDARAEEFGITPGNSYTLDFFFAERHTTESNF 276 Query: 226 TMTTSLAL 233 + TS+ Sbjct: 277 RIDTSIGC 284 >ref|YP_528422.1| periplasmic protein TonB links inner and outer membranes-like protein [Saccharophagus degradans 2-40] gb|ABD82210.1| Fibro-slime [Saccharophagus degradans 2-40] Length = 1004 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 90/206 (43%), Positives = 118/206 (57%), Gaps = 14/206 (6%) Query: 31 TVRDFNSYGTTFNGVAGHPDFESHVSDDRGIVKSTLGADGKPVY-NSADYNPTVSSAASF 89 T+RDF+ HPDFE V D GIV LG D PVY N PT + A+F Sbjct: 804 TLRDFHQ---------SHPDFEYKVGQDYGIVAPYLGEDRLPVYANEHGSTPTTNGKATF 854 Query: 90 YQWYHDDASVNRTGSVSINLNQIGPN-LYQYSSNSFFPIDNQLLAQTT-MGHNFGFTTEW 147 QWY + VN S+ + + G N +++YS+ +FFP+DNQ T HNF FT E Sbjct: 855 DQWYRNVEGVNIAFDTSLEITREGENSVWRYSNGNFFPLDNQGWGNTEGQDHNFYFTLET 914 Query: 148 HTQFTYNSAANSNFTFKGDDDVGVFINGKLAIDLGGVHGEETASVDLNSFAAGAGMNNGG 207 H +F Y FTF+GDDD+ ++INGKL ID+GGVH S+DL+ AA G+ G Sbjct: 915 HLEFLYEGG--EVFTFRGDDDLWLYINGKLVIDIGGVHSMIERSIDLDKAAAELGIEVGQ 972 Query: 208 TYRLDIFQAERHTSGSNFTMTTSLAL 233 TY D+F AERHT+ SNF + T++ L Sbjct: 973 TYSFDLFFAERHTTQSNFQIETNINL 998