BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0156.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776600.1| membrane protein [Herbaspirillum seropedicae... 431 e-119 ref|YP_003939835.1| hypothetical protein Entcl_0273 [Enterobacte... 323 2e-86 ref|NP_756126.1| hypothetical protein c4264 [Escherichia coli CF... 322 2e-86 ref|ZP_02901102.1| putative membrane protein [Escherichia albert... 322 2e-86 ref|YP_405083.1| hypothetical protein SDY_3622 [Shigella dysente... 320 9e-86 ref|NP_290019.1| hypothetical protein Z4845 [Escherichia coli O1... 319 1e-85 ref|YP_001178584.1| hypothetical protein Ent638_3878 [Enterobact... 319 2e-85 ref|ZP_08356053.1| inner membrane protein YhhQ [Escherichia coli... 319 2e-85 ref|ZP_08365981.1| inner membrane protein YhhQ [Escherichia coli... 319 2e-85 ref|YP_002384525.1| hypothetical protein EFER_3445 [Escherichia ... 319 2e-85 >ref|YP_003776600.1| membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64692.1| membrane protein [Herbaspirillum seropedicae SmR1] Length = 218 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/218 (99%), Positives = 218/218 (100%) Query: 1 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV 60 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV Sbjct: 1 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV 60 Query: 61 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV 120 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV Sbjct: 61 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV 120 Query: 121 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIAL 180 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHW+EIAL Sbjct: 121 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWIEIAL 180 Query: 181 VDYGFKIAISLLFFLPAYGALMSCLKSWFARPLAADPA 218 VDYGFKIAISLLFFLPAYGALMSCLKSWFARPLAADPA Sbjct: 181 VDYGFKIAISLLFFLPAYGALMSCLKSWFARPLAADPA 218 >ref|YP_003939835.1| hypothetical protein Entcl_0273 [Enterobacter cloacae SCF1] gb|ADO46551.1| conserved hypothetical protein [Enterobacter cloacae SCF1] Length = 221 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 159/205 (77%), Positives = 175/205 (85%) Query: 1 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV 60 MTT + + L WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTV Sbjct: 1 MTTFSVLQRKHALVWLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTV 60 Query: 61 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV 120 R FGAPLARRIIFAVM+PAL ISY VSALFYMG+WQGF AL FN+FVARIAAASFMAY Sbjct: 61 RIFGAPLARRIIFAVMMPALLISYTVSALFYMGEWQGFAALGSFNLFVARIAAASFMAYA 120 Query: 121 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIAL 180 LGQ+LDV VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS DPFMA HWVEIAL Sbjct: 121 LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDPFMAAHWVEIAL 180 Query: 181 VDYGFKIAISLLFFLPAYGALMSCL 205 VDY FK+ IS++FFLP YG L++ L Sbjct: 181 VDYTFKVLISMVFFLPMYGVLLNML 205 >ref|NP_756126.1| hypothetical protein c4264 [Escherichia coli CFT073] ref|YP_542947.1| hypothetical protein UTI89_C3987 [Escherichia coli UTI89] ref|YP_671443.1| hypothetical protein ECP_3566 [Escherichia coli 536] ref|YP_859071.1| hypothetical protein APECO1_2983 [Escherichia coli APEC O1] ref|ZP_03032014.1| putative membrane protein [Escherichia coli F11] ref|YP_002331178.1| hypothetical protein E2348C_3712 [Escherichia coli O127:H6 str. E2348/69] ref|YP_002393452.1| hypothetical protein ECS88_3874 [Escherichia coli S88] ref|YP_002399968.1| hypothetical protein ECED1_4144 [Escherichia coli ED1a] ref|YP_002409845.1| hypothetical protein ECIAI39_3952 [Escherichia coli IAI39] ref|ZP_04001422.1| membrane protein [Escherichia coli 83972] ref|ZP_04533699.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] ref|ZP_07177334.1| conserved hypothetical integral membrane protein [Escherichia coli MS 45-1] ref|ZP_07178178.1| conserved hypothetical integral membrane protein [Escherichia coli MS 200-1] ref|ZP_07197193.1| conserved hypothetical integral membrane protein [Escherichia coli MS 185-1] ref|ZP_07450323.1| hypothetical protein ECNC101_06224 [Escherichia coli NC101] ref|ZP_07782426.1| inner membrane protein yhhQ [Escherichia coli 2362-75] ref|ZP_08350364.1| inner membrane protein YhhQ [Escherichia coli M605] ref|ZP_08360705.1| inner membrane protein YhhQ [Escherichia coli TA206] ref|ZP_08385703.1| inner membrane protein YhhQ [Escherichia coli H299] gb|AAN82700.1|AE016768_118 Hypothetical protein yhhQ [Escherichia coli CFT073] gb|ABE09416.1| hypothetical protein YhhQ [Escherichia coli UTI89] gb|ABG71542.1| putative integral membrane protein [Escherichia coli 536] gb|ABJ02947.1| conserved inner membrane protein [Escherichia coli APEC O1] gb|EDV68855.1| putative membrane protein [Escherichia coli F11] emb|CAS11260.1| conserved inner membrane protein [Escherichia coli O127:H6 str. E2348/69] emb|CAR05086.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli S88] emb|CAR20064.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI39] emb|CAR10279.2| conserved hypothetical protein; putative inner membrane protein [Escherichia coli ED1a] emb|CAP77922.1| Inner membrane protein yhhQ [Escherichia coli LF82] gb|EEH88741.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gb|EEJ49962.1| membrane protein [Escherichia coli 83972] dbj|BAI56830.1| conserved hypothetical protein [Escherichia coli SE15] gb|ADE90955.1| putative membrane protein [Escherichia coli IHE3034] gb|EFJ54318.1| conserved hypothetical integral membrane protein [Escherichia coli MS 185-1] gb|EFJ60758.1| conserved hypothetical integral membrane protein [Escherichia coli MS 200-1] gb|EFJ91646.1| conserved hypothetical integral membrane protein [Escherichia coli MS 45-1] gb|EFM51038.1| hypothetical protein ECNC101_06224 [Escherichia coli NC101] gb|ADN48340.1| conserved inner membrane protein [Escherichia coli ABU 83972] gb|ADN72848.1| hypothetical protein UM146_17480 [Escherichia coli UM146] gb|EFR14951.1| inner membrane protein yhhQ [Escherichia coli 2362-75] gb|ADR28851.1| hypothetical protein NRG857_17210 [Escherichia coli O83:H1 str. NRG 857C] gb|EFU45556.1| conserved hypothetical integral membrane protein [Escherichia coli MS 110-3] gb|EFU51030.1| conserved hypothetical integral membrane protein [Escherichia coli MS 153-1] gb|EFU55268.1| conserved hypothetical integral membrane protein [Escherichia coli MS 16-3] gb|EFZ74222.1| inner membrane protein yhhQ [Escherichia coli RN587/1] gb|EGB46022.1| inner membrane protein yhhQ [Escherichia coli H252] gb|EGB50554.1| inner membrane protein yhhQ [Escherichia coli H263] gb|EGB78578.1| conserved hypothetical integral membrane protein [Escherichia coli MS 57-2] gb|EGB83788.1| conserved hypothetical integral membrane protein [Escherichia coli MS 60-1] gb|EGH38026.1| putative preQ0 transporter [Escherichia coli AA86] gb|EGI13920.1| inner membrane protein YhhQ [Escherichia coli M605] gb|EGI25015.1| inner membrane protein YhhQ [Escherichia coli TA206] gb|EGI48700.1| inner membrane protein YhhQ [Escherichia coli H299] gb|AEG38419.1| Hypothetical protein ECNA114_3580 [Escherichia coli NA114] Length = 221 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/199 (79%), Positives = 176/199 (88%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYKALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SRHWWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIALVDY FK Sbjct: 127 VHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|ZP_02901102.1| putative membrane protein [Escherichia albertii TW07627] gb|EDS93018.1| putative membrane protein [Escherichia albertii TW07627] Length = 221 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 158/199 (79%), Positives = 176/199 (88%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYKALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SRHWWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIALVDY FK Sbjct: 127 VHVFNRLRQSRHWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|YP_405083.1| hypothetical protein SDY_3622 [Shigella dysenteriae Sd197] ref|ZP_07680423.1| inner membrane protein yhhQ [Shigella dysenteriae 1617] gb|ABB63592.1| conserved hypothetical protein [Shigella dysenteriae Sd197] gb|EFP72388.1| inner membrane protein yhhQ [Shigella dysenteriae 1617] Length = 221 Score = 320 bits (820), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 157/199 (78%), Positives = 175/199 (87%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYKALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIALVDY FK Sbjct: 127 VHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWIEIALVDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|NP_290019.1| hypothetical protein Z4845 [Escherichia coli O157:H7 str. EDL933] ref|NP_312347.1| hypothetical protein ECs4320 [Escherichia coli O157:H7 str. Sakai] ref|NP_709241.1| hypothetical protein SF3489 [Shigella flexneri 2a str. 301] ref|NP_839423.1| hypothetical protein S4274 [Shigella flexneri 2a str. 2457T] ref|ZP_02772057.1| putative membrane protein [Escherichia coli O157:H7 str. EC4113] ref|ZP_02778246.1| putative membrane protein [Escherichia coli O157:H7 str. EC4401] ref|ZP_02784516.1| putative membrane protein [Escherichia coli O157:H7 str. EC4501] ref|ZP_02790841.1| putative membrane protein [Escherichia coli O157:H7 str. EC4486] ref|ZP_02797627.1| putative membrane protein [Escherichia coli O157:H7 str. EC4196] ref|ZP_02804577.1| putative membrane protein [Escherichia coli O157:H7 str. EC4076] ref|ZP_02810299.1| putative membrane protein [Escherichia coli O157:H7 str. EC869] ref|ZP_02822264.1| putative membrane protein [Escherichia coli O157:H7 str. EC508] ref|YP_001745721.1| hypothetical protein EcSMS35_3755 [Escherichia coli SMS-3-5] ref|ZP_03031326.1| putative membrane protein [Escherichia coli B7A] ref|ZP_03043009.1| putative membrane protein [Escherichia coli E22] ref|ZP_03049748.1| putative membrane protein [Escherichia coli E110019] ref|ZP_03052408.1| putative membrane protein [Escherichia coli E110019] ref|ZP_03059489.1| putative membrane protein [Escherichia coli B171] ref|ZP_03063506.1| putative membrane protein [Shigella dysenteriae 1012] ref|ZP_03080347.1| hypothetical protein EscherichcoliO157_00665 [Escherichia coli O157:H7 str. EC4024] ref|ZP_03251710.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206] ref|ZP_03253441.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045] ref|ZP_03262184.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042] ref|YP_002272915.1| hypothetical protein ECH74115_4791 [Escherichia coli O157:H7 str. EC4115] ref|YP_002295014.1| hypothetical protein ECSE_3739 [Escherichia coli SE11] ref|ZP_03442375.1| putative membrane protein [Escherichia coli O157:H7 str. TW14588] ref|YP_002388935.1| hypothetical protein ECIAI1_3618 [Escherichia coli IAI1] ref|YP_002404821.1| hypothetical protein EC55989_3879 [Escherichia coli 55989] ref|YP_002414585.1| hypothetical protein ECUMN_3934 [Escherichia coli UMN026] ref|YP_003080228.1| hypothetical protein ECSP_4427 [Escherichia coli O157:H7 str. TW14359] ref|YP_003224033.1| hypothetical protein ECO103_4191 [Escherichia coli O103:H2 str. 12009] ref|YP_003231468.1| hypothetical protein ECO26_4558 [Escherichia coli O26:H11 str. 11368] ref|YP_003236598.1| hypothetical protein ECO111_4279 [Escherichia coli O111:H- str. 11128] ref|ZP_05939035.1| conserved inner membrane protein [Escherichia coli O157:H7 str. FRIK2000] ref|ZP_05946884.1| hypothetical protein EscherichiacoliO157EcO_00807 [Escherichia coli O157:H7 str. FRIK966] ref|YP_003501629.1| hypothetical protein G2583_4174 [Escherichia coli O55:H7 str. CB9615] ref|ZP_06650977.1| inner membrane protein yhhQ [Escherichia coli FVEC1412] ref|ZP_06655560.1| inner membrane protein yhhQ [Escherichia coli B354] ref|ZP_06659512.1| inner membrane protein yhhQ [Escherichia coli B185] ref|ZP_06664195.1| inner membrane protein yhhQ [Escherichia coli B088] ref|ZP_06992394.1| inner membrane protein yhhQ [Escherichia coli FVEC1302] ref|ZP_07095549.1| conserved hypothetical integral membrane protein [Escherichia coli MS 107-1] ref|ZP_07102860.1| conserved hypothetical integral membrane protein [Escherichia coli MS 119-7] ref|ZP_07117130.1| conserved hypothetical integral membrane protein [Escherichia coli MS 198-1] ref|ZP_07125026.1| conserved hypothetical integral membrane protein [Escherichia coli MS 84-1] ref|ZP_07142599.1| conserved hypothetical integral membrane protein [Escherichia coli MS 182-1] ref|ZP_07151388.1| conserved hypothetical integral membrane protein [Escherichia coli MS 21-1] ref|ZP_07182936.1| conserved hypothetical integral membrane protein [Escherichia coli MS 69-1] ref|ZP_07212071.1| conserved hypothetical integral membrane protein [Escherichia coli MS 124-1] ref|ZP_07222531.1| conserved hypothetical integral membrane protein [Escherichia coli MS 78-1] ref|ZP_07591500.1| conserved hypothetical protein [Escherichia coli W] ref|ZP_07689173.1| conserved hypothetical integral membrane protein [Escherichia coli MS 145-7] ref|ZP_08371136.1| inner membrane protein YhhQ [Escherichia coli TA271] ref|ZP_08375713.1| inner membrane protein YhhQ [Escherichia coli TA280] ref|ZP_08380209.1| inner membrane protein YhhQ [Escherichia coli H591] gb|AAG58580.1|AE005570_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] dbj|BAB37743.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gb|AAN44948.1| conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAP19234.1| hypothetical protein S4274 [Shigella flexneri 2a str. 2457T] gb|ACB18798.1| putative membrane protein [Escherichia coli SMS-3-5] gb|EDU35221.1| putative membrane protein [Escherichia coli O157:H7 str. EC4196] gb|EDU56524.1| putative membrane protein [Escherichia coli O157:H7 str. EC4113] gb|EDU71383.1| putative membrane protein [Escherichia coli O157:H7 str. EC4076] gb|EDU77211.1| putative membrane protein [Escherichia coli O157:H7 str. EC4401] gb|EDU83106.1| putative membrane protein [Escherichia coli O157:H7 str. EC4486] gb|EDU88238.1| putative membrane protein [Escherichia coli O157:H7 str. EC4501] gb|EDU92657.1| putative membrane protein [Escherichia coli O157:H7 str. EC869] gb|EDU98309.1| putative membrane protein [Escherichia coli O157:H7 str. EC508] gb|EDV60182.1| putative membrane protein [Escherichia coli B7A] gb|EDV85299.1| putative membrane protein [Escherichia coli E22] gb|EDV85666.1| putative membrane protein [Escherichia coli E110019] gb|EDV88307.1| putative membrane protein [Escherichia coli E110019] gb|EDX31168.1| putative membrane protein [Escherichia coli B171] gb|EDX36744.1| putative membrane protein [Shigella dysenteriae 1012] gb|EDZ78775.1| putative membrane protein [Escherichia coli O157:H7 str. EC4206] gb|EDZ82076.1| putative membrane protein [Escherichia coli O157:H7 str. EC4045] gb|EDZ89669.1| putative membrane protein [Escherichia coli O157:H7 str. EC4042] gb|ACI37283.1| putative membrane protein [Escherichia coli O157:H7 str. EC4115] gb|ACI76281.1| hypothetical protein ECs4320 [Escherichia coli] gb|ACI76282.1| hypothetical protein ECs4320 [Escherichia coli] gb|ACI76283.1| hypothetical protein ECs4320 [Escherichia coli] gb|ACI76284.1| hypothetical protein ECs4320 [Escherichia coli] gb|ACI76285.1| hypothetical protein ECs4320 [Escherichia coli] dbj|BAG79263.1| conserved hypothetical protein [Escherichia coli SE11] gb|EEC30936.1| putative membrane protein [Escherichia coli O157:H7 str. TW14588] emb|CAV00285.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli 55989] emb|CAR00416.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli IAI1] emb|CAR15080.1| conserved hypothetical protein; putative inner membrane protein [Escherichia coli UMN026] gb|ACT74152.1| conserved inner membrane protein [Escherichia coli O157:H7 str. TW14359] dbj|BAI27728.1| conserved predicted inner membrane protein [Escherichia coli O26:H11 str. 11368] dbj|BAI32899.1| conserved predicted inner membrane protein [Escherichia coli O103:H2 str. 12009] dbj|BAI38047.1| conserved predicted inner membrane protein [Escherichia coli O111:H- str. 11128] gb|ADA75803.1| Inner membrane protein yhhQ [Shigella flexneri 2002017] emb|CBG36557.1| putative membrane protein [Escherichia coli 042] gb|ADD58645.1| hypothetical protein G2583_4174 [Escherichia coli O55:H7 str. CB9615] gb|EFE61333.1| inner membrane protein yhhQ [Escherichia coli B088] gb|EFE98898.1| inner membrane protein yhhQ [Escherichia coli FVEC1412] gb|EFF04436.1| inner membrane protein yhhQ [Escherichia coli B185] gb|EFF11032.1| inner membrane protein yhhQ [Escherichia coli B354] gb|EFI18153.1| inner membrane protein yhhQ [Escherichia coli FVEC1302] gb|EFJ73421.1| conserved hypothetical integral membrane protein [Escherichia coli MS 198-1] gb|EFJ83215.1| conserved hypothetical integral membrane protein [Escherichia coli MS 69-1] gb|EFJ84425.1| conserved hypothetical integral membrane protein [Escherichia coli MS 84-1] gb|EFK00492.1| conserved hypothetical integral membrane protein [Escherichia coli MS 182-1] gb|EFK21883.1| conserved hypothetical integral membrane protein [Escherichia coli MS 21-1] gb|EFK45792.1| conserved hypothetical integral membrane protein [Escherichia coli MS 119-7] gb|EFK53278.1| conserved hypothetical integral membrane protein [Escherichia coli MS 107-1] gb|EFK66533.1| conserved hypothetical integral membrane protein [Escherichia coli MS 124-1] gb|EFK71905.1| conserved hypothetical integral membrane protein [Escherichia coli MS 78-1] gb|EFN38506.1| conserved hypothetical protein [Escherichia coli W] gb|EFO59063.1| conserved hypothetical integral membrane protein [Escherichia coli MS 145-7] gb|EFS11682.1| inner membrane protein yhhQ [Shigella flexneri 2a str. 2457T] gb|ADT77077.1| conserved inner membrane protein [Escherichia coli W] gb|EFU36037.1| conserved hypothetical integral membrane protein [Escherichia coli MS 85-1] gb|EFW56870.1| Putative preQ0 transporter [Shigella boydii ATCC 9905] gb|EFW66163.1| Putative preQ0 transporter [Escherichia coli O157:H7 str. EC1212] gb|EFW68660.1| Putative preQ0 transporter [Escherichia coli WV_060327] gb|EFW74238.1| Putative preQ0 transporter [Escherichia coli EC4100B] gb|EFX09349.1| hypothetical protein ECO5101_02045 [Escherichia coli O157:H7 str. G5101] gb|EFX14270.1| hypothetical protein ECO9389_01794 [Escherichia coli O157:H- str. 493-89] gb|EFX19031.1| hypothetical protein ECO2687_04684 [Escherichia coli O157:H- str. H 2687] gb|EFX23681.1| hypothetical protein ECO7815_03065 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EFX28956.1| hypothetical protein ECO5905_02062 [Escherichia coli O55:H7 str. USDA 5905] gb|EFX33547.1| hypothetical protein ECOSU61_16150 [Escherichia coli O157:H7 str. LSU-61] gb|EFZ40513.1| inner membrane protein yhhQ [Escherichia coli EPECa14] gb|EFZ48550.1| inner membrane protein yhhQ [Escherichia coli E128010] gb|EFZ59738.1| inner membrane protein yhhQ [Escherichia coli LT-68] gb|EFZ64576.1| inner membrane protein yhhQ [Escherichia coli 1180] gb|EFZ68337.1| inner membrane protein yhhQ [Escherichia coli 1357] gb|ADX48930.1| conserved hypothetical protein [Escherichia coli KO11FL] gb|EGB40380.1| inner membrane protein yhhQ [Escherichia coli H120] gb|EGB61573.1| inner membrane protein yhhQ [Escherichia coli M863] gb|EGB87828.1| conserved hypothetical integral membrane protein [Escherichia coli MS 117-3] gb|EGC10442.1| inner membrane protein yhhQ [Escherichia coli E1167] gb|EGD61396.1| Putative preQ0 transporter [Escherichia coli O157:H7 str. 1044] gb|EGD68437.1| Putative preQ0 transporter [Escherichia coli O157:H7 str. 1125] gb|EGE62801.1| inner membrane protein yhhQ [Escherichia coli STEC_7v] gb|EGI34279.1| inner membrane protein YhhQ [Escherichia coli TA271] gb|EGI39263.1| inner membrane protein YhhQ [Escherichia coli TA280] gb|EGI44036.1| inner membrane protein YhhQ [Escherichia coli H591] gb|EGI90506.1| inner membrane protein yhhQ [Shigella boydii 5216-82] gb|EGI90875.1| inner membrane protein yhhQ [Shigella dysenteriae 155-74] gb|EGJ79846.1| inner membrane protein yhhQ [Shigella flexneri K-671] gb|EGJ80687.1| inner membrane protein yhhQ [Shigella flexneri 4343-70] gb|EGJ81601.1| inner membrane protein yhhQ [Shigella flexneri 2747-71] gb|EGJ93785.1| hypothetical protein SF293071_4678 [Shigella flexneri 2930-71] gb|EGK15885.1| inner membrane protein yhhQ [Shigella flexneri VA-6] gb|EGK16205.1| inner membrane protein yhhQ [Shigella flexneri K-272] gb|EGK16905.1| inner membrane protein yhhQ [Shigella flexneri K-218] gb|EGK31910.1| inner membrane protein yhhQ [Shigella flexneri K-304] gb|EGK32364.1| inner membrane protein yhhQ [Shigella flexneri K-227] gb|EGP23203.1| hypothetical protein PPECC33_33650 [Escherichia coli PCN033] gb|EGR62126.1| hypothetical protein HUSEC41_19193 [Escherichia coli O104:H4 str. 01-09591] gb|EGT69472.1| hypothetical protein C22711_3502 [Escherichia coli O104:H4 str. C227-11] gb|EGU98777.1| inner membrane protein YhhQ [Escherichia coli MS 79-10] gb|EGW65093.1| inner membrane protein yhhQ [Escherichia coli STEC_C165-02] gb|EGW65906.1| inner membrane protein yhhQ [Escherichia coli 2534-86] gb|EGW67293.1| inner membrane protein yhhQ [Escherichia coli STEC_B2F1] gb|EGW81739.1| inner membrane protein yhhQ [Escherichia coli 3030-1] gb|EGW87358.1| inner membrane protein yhhQ [Escherichia coli STEC_DG131-3] gb|EGX02120.1| inner membrane protein yhhQ [Escherichia coli STEC_MHI813] gb|EGX05569.1| inner membrane protein yhhQ [Escherichia coli STEC_H.1.8] gb|EGX20759.1| inner membrane protein yhhQ [Escherichia coli TX1999] Length = 221 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 157/199 (78%), Positives = 175/199 (87%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYKALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIALVDY FK Sbjct: 127 VHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|YP_001178584.1| hypothetical protein Ent638_3878 [Enterobacter sp. 638] gb|ABP62533.1| conserved hypothetical integral membrane protein [Enterobacter sp. 638] Length = 221 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 154/205 (75%), Positives = 175/205 (85%) Query: 1 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV 60 MT + L WLSLFHLLVITSSNYLVQLP+++FG HTTWGAFSFPFIFLATDLTV Sbjct: 1 MTQFSQSQRVKALFWLSLFHLLVITSSNYLVQLPISIFGFHTTWGAFSFPFIFLATDLTV 60 Query: 61 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV 120 R FGAPLARRIIFAVMLPALF+SYG+S+LFYMG WQGF AL HFN+FVARIAAASFMAY Sbjct: 61 RIFGAPLARRIIFAVMLPALFVSYGISSLFYMGSWQGFEALLHFNLFVARIAAASFMAYA 120 Query: 121 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIAL 180 LGQ+LDV VFNRLR + WW+AP+ S +FGN SDT+AFF IAFWRS D FMA+HW+EIAL Sbjct: 121 LGQILDVHVFNRLRQNHRWWMAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAQHWMEIAL 180 Query: 181 VDYGFKIAISLLFFLPAYGALMSCL 205 VDYGFK+ IS++FFLP YG L++ L Sbjct: 181 VDYGFKVLISIVFFLPMYGVLLNML 205 >ref|ZP_08356053.1| inner membrane protein YhhQ [Escherichia coli M718] gb|EGI19147.1| inner membrane protein YhhQ [Escherichia coli M718] Length = 221 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 157/199 (78%), Positives = 175/199 (87%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYNALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIALVDY FK Sbjct: 127 VHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|ZP_08365981.1| inner membrane protein YhhQ [Escherichia coli TA143] gb|EGI29576.1| inner membrane protein YhhQ [Escherichia coli TA143] Length = 221 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 156/199 (78%), Positives = 175/199 (87%), Gaps = 1/199 (0%) Query: 7 RRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTVRFFGAP 66 +R+ AL WLSLFHLLVITSSNYLVQLPV++FG HTTWGAFSFPFIFLATDLTVR FGAP Sbjct: 8 QRYKALF-WLSLFHLLVITSSNYLVQLPVSIFGFHTTWGAFSFPFIFLATDLTVRIFGAP 66 Query: 67 LARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYVLGQVLD 126 LARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY LGQ+LD Sbjct: 67 LARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILD 126 Query: 127 VQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIALVDYGFK 186 V VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIAL+DY FK Sbjct: 127 VHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALIDYCFK 186 Query: 187 IAISLLFFLPAYGALMSCL 205 + IS++FFLP YG L++ L Sbjct: 187 VLISIVFFLPMYGVLLNML 205 >ref|YP_002384525.1| hypothetical protein EFER_3445 [Escherichia fergusonii ATCC 35469] emb|CAQ90922.1| conserved hypothetical protein; putative inner membrane protein [Escherichia fergusonii ATCC 35469] gb|EGC05772.1| inner membrane protein yhhQ [Escherichia fergusonii B253] gb|EGC96879.1| hypothetical protein ECD227_3117 [Escherichia fergusonii ECD227] Length = 221 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 156/205 (76%), Positives = 173/205 (84%) Query: 1 MTTLDLRRHAALLTWLSLFHLLVITSSNYLVQLPVALFGLHTTWGAFSFPFIFLATDLTV 60 MT + L WLSLFHLLVITSSNYLVQLP+ +FG HTTWGAFSFPFIFLATDLTV Sbjct: 1 MTHFSQSQRVKALFWLSLFHLLVITSSNYLVQLPITIFGFHTTWGAFSFPFIFLATDLTV 60 Query: 61 RFFGAPLARRIIFAVMLPALFISYGVSALFYMGQWQGFGALAHFNVFVARIAAASFMAYV 120 R FGAPLARRIIFAVM+PAL ISY +S+LFYMG WQGFGALAHFN+FVARIA ASFMAY Sbjct: 61 RIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYA 120 Query: 121 LGQVLDVQVFNRLRASRHWWLAPSVSMIFGNASDTIAFFSIAFWRSSDPFMAEHWVEIAL 180 LGQ+LDV VFNRLR SR WWLAP+ S +FGN SDT+AFF IAFWRS D FMAEHW+EIAL Sbjct: 121 LGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIAL 180 Query: 181 VDYGFKIAISLLFFLPAYGALMSCL 205 VDY FK+ IS++FFLP YG L++ L Sbjct: 181 VDYCFKVLISIVFFLPMYGVLLNML 205