BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0145.p (490 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776590.1| iron-sulfur 4Fe-4S ferredoxin transmembrane ... 993 0.0 ref|ZP_08273910.1| Type cbb3 cytochrome oxidase biogenesis prote... 681 0.0 ref|YP_001353325.1| 4Fe-4S ferredoxin, iron sulfur binding [Jant... 676 0.0 emb|CAL61798.2| Putative ferredoxin [Herminiimonas arsenicoxydans] 675 0.0 ref|YP_001099923.1| putative ferredoxin transmembrane protein [H... 670 0.0 ref|YP_004489319.1| cytochrome c oxidase accessory protein CcoG ... 582 e-164 ref|YP_003048155.1| cytochrome c oxidase accessory protein CcoG ... 582 e-164 ref|YP_001563802.1| cytochrome c oxidase accessory protein CcoG ... 582 e-164 gb|EEE75403.1| predicted protein [Populus trichocarpa] 581 e-163 ref|ZP_08402393.1| cytochrome c oxidase accessory protein CcoG [... 580 e-163 >ref|YP_003776590.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64682.1| iron-sulfur 4Fe-4S ferredoxin transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 485 Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/485 (99%), Positives = 485/485 (100%) Query: 6 MKPRQDKEGDPPPDTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLV 65 MKPRQDKEGDPPPDTGD+KTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLV Sbjct: 1 MKPRQDKEGDPPPDTGDSKTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLV 60 Query: 66 FYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRV 125 FYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRV Sbjct: 61 FYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRV 120 Query: 126 WCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTG 185 WCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTG Sbjct: 121 WCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTG 180 Query: 186 ISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQS 245 ISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQS Sbjct: 181 ISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQS 240 Query: 246 AMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQY 305 AMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQY Sbjct: 241 AMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQY 300 Query: 306 MCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILG 365 MCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILG Sbjct: 301 MCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILG 360 Query: 366 AVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKG 425 AVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKG Sbjct: 361 AVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKG 420 Query: 426 LAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVF 485 LAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVF Sbjct: 421 LAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVF 480 Query: 486 LVPRR 490 LVPRR Sbjct: 481 LVPRR 485 >ref|ZP_08273910.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Oxalobacteraceae bacterium IMCC9480] gb|EGF32625.1| Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation [Oxalobacteraceae bacterium IMCC9480] Length = 481 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/461 (68%), Positives = 378/461 (81%) Query: 29 EYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLVFYGLPWINWNERQAVLFDLASRK 88 E +VI+MYAARE+IYPREI+GR+A+LRWLCV+LTQLVFYGLPW+ WN+RQA+LFDL +RK Sbjct: 5 EVSVIKMYAAREEIYPREIKGRYATLRWLCVWLTQLVFYGLPWLQWNDRQALLFDLGARK 64 Query: 89 FYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRVWCGYSCPQTVYTEIFMWIERRIE 148 FY+FG+VLWPQDFI+LA LLIICA+ LFL TAVAGRVWCG++CPQTVYTEIFMWIER+IE Sbjct: 65 FYIFGIVLWPQDFIYLAVLLIICAYGLFLVTAVAGRVWCGFACPQTVYTEIFMWIERKIE 124 Query: 149 GNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTGISFVGYFSPIRDLLPEISGFALG 208 G RSARMRLD+Q W DKLWRKSAKHL WGAVALWTG++FVGYF+P+R L+ ++ LG Sbjct: 125 GTRSARMRLDKQAWGIDKLWRKSAKHLVWGAVALWTGLTFVGYFTPVRSLIGAVASLGLG 184 Query: 209 PWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQSAMFDRDSLIITYDVARGEPRMPA 268 PWE FWILFY ATYGNAGWMREQVCKYMCPYARFQS+MFD+D+LIITYD RGEPR P Sbjct: 185 PWEWFWILFYSLATYGNAGWMREQVCKYMCPYARFQSSMFDKDTLIITYDTDRGEPRGPR 244 Query: 269 AKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQYMCIGCAACVDACDSVMDKIKRPR 328 AK GDCIDC+MCVQVCPTGIDIR GLQY CIGCAAC+DAC+SVM KI P Sbjct: 245 AKKTVAPAANVQGDCIDCSMCVQVCPTGIDIRDGLQYECIGCAACIDACNSVMAKIDLPA 304 Query: 329 GLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILGAVIALFAGSLWVRTPLKLDVIRD 388 GLIRYST++A+ + +S A+++ R++RPR+LIY AILG +I F SL++RTPLK+DVIRD Sbjct: 305 GLIRYSTDHAITKKWSFAQMQARVLRPRVLIYTAILGLIITAFFVSLFMRTPLKMDVIRD 364 Query: 389 RGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKGLAGLSVDPATPIEVAATQTVSVP 448 RGSMGREVE+G+IENVYRLQI+NTDE H + + G+ G+++ +++ T + +VP Sbjct: 365 RGSMGREVEDGMIENVYRLQIMNTDEASHHFKISVAGIDGIALASPDELDLEGTGSRAVP 424 Query: 449 VRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVFLVPR 489 VRVR G G GSNKI L A D + V+EKAVF VPR Sbjct: 425 VRVRVAAGEGRSGSNKISFTLVATDHASQQVTEKAVFFVPR 465 >ref|YP_001353325.1| 4Fe-4S ferredoxin, iron sulfur binding [Janthinobacterium sp. Marseille] gb|ABR89649.1| 4Fe-4S ferredoxin, iron sulfur binding [Janthinobacterium sp. Marseille] Length = 466 Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/466 (67%), Positives = 379/466 (81%), Gaps = 1/466 (0%) Query: 24 KTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLVFYGLPWINWNERQAVLFD 83 K K E +VI+MYAARE+IYPRE +GR+ASLRWLCV+LTQL FYGLPW++WN RQA+LFD Sbjct: 2 KNSKPEVSVIKMYAAREEIYPRETKGRYASLRWLCVWLTQLAFYGLPWLSWNGRQALLFD 61 Query: 84 LASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRVWCGYSCPQTVYTEIFMWI 143 LA+RKFY+FG+VLWPQDFI+LAALLIICA+ LFL TA+AGRVWCG+SCPQTVYTEIF+WI Sbjct: 62 LAARKFYIFGIVLWPQDFIYLAALLIICAYLLFLATAIAGRVWCGFSCPQTVYTEIFLWI 121 Query: 144 ERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTGISFVGYFSPIRDLLPEIS 203 ER IEG RSARMRLD+QP SF KL +K+AKH+AWGAVALWTG +FVGYF+PIR+L ++ Sbjct: 122 ERVIEGKRSARMRLDKQPASFAKLAKKTAKHMAWGAVALWTGFTFVGYFTPIRELALQVV 181 Query: 204 GFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQSAMFDRDSLIITYDVARGE 263 LGPW+ FW+LFY FATYGNAGW+REQVCKYMCPYARFQS+MFD+DSLII+YD RGE Sbjct: 182 ALTLGPWQMFWVLFYSFATYGNAGWLREQVCKYMCPYARFQSSMFDKDSLIISYDRKRGE 241 Query: 264 PRMPAAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQYMCIGCAACVDACDSVMDK 323 PR + K + G G CIDC+MCVQVCP GIDIR GLQY CIGCAACVDAC+SVMDK Sbjct: 242 PRGMSNKHSA-AAGLSFGACIDCSMCVQVCPVGIDIRDGLQYECIGCAACVDACNSVMDK 300 Query: 324 IKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILGAVIALFAGSLWVRTPLKL 383 I RGL+RY+T+NA+ S E+RRR +RPR+LIYGAIL A+I +F +L +RTPLKL Sbjct: 301 IGSARGLVRYTTDNALANNLSVKEVRRRALRPRVLIYGAILAAIIIVFFTALTMRTPLKL 360 Query: 384 DVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKGLAGLSVDPATPIEVAATQ 443 DVIRDRG+MGREVE+G+IENVYRLQI+NT E+ H+Y + G+ L + + + T+ Sbjct: 361 DVIRDRGAMGREVEDGMIENVYRLQIMNTSEQAHQYKISVSGIESLELATPDEVRLQGTE 420 Query: 444 TVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVFLVPR 489 T +VPVRVR G GE GSN+I L+A D L+V+E AVF VPR Sbjct: 421 TRAVPVRVRVAAGHGEPGSNEISFSLQALDDAGLHVTEHAVFFVPR 466 >emb|CAL61798.2| Putative ferredoxin [Herminiimonas arsenicoxydans] Length = 472 Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/472 (67%), Positives = 378/472 (80%), Gaps = 4/472 (0%) Query: 20 TGDNKTGKD-EYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLVFYGLPWINWNERQ 78 G N + D E +VI+MYAARE+IYPRE +GR+ASLRWLCV+LTQL FYGLPW+NWN RQ Sbjct: 3 NGKNMSSSDPEVSVIQMYAAREEIYPRETKGRYASLRWLCVWLTQLAFYGLPWLNWNGRQ 62 Query: 79 AVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRVWCGYSCPQTVYTE 138 A+LFDL +RKFY+FG+VLWPQDFI+LAALLII A+ LFL TA+AGRVWCG++CPQTVYTE Sbjct: 63 ALLFDLTARKFYIFGIVLWPQDFIYLAALLIIAAYLLFLVTAIAGRVWCGFACPQTVYTE 122 Query: 139 IFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTGISFVGYFSPIRDL 198 IF+WIER IEG RSARMRLD+QP SF K +K+AKH+AWG VALWTG +FV YF+PI L Sbjct: 123 IFLWIERVIEGKRSARMRLDKQPASFSKFAKKTAKHMAWGGVALWTGFTFVAYFTPIHTL 182 Query: 199 LPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQSAMFDRDSLIITYD 258 + ++ LGPWE FWILFY ATYGNAGW+REQVCKYMCPYARFQS+MFD+DSLIITYD Sbjct: 183 MQKVLNLGLGPWELFWILFYALATYGNAGWLREQVCKYMCPYARFQSSMFDKDSLIITYD 242 Query: 259 VARGEPR-MPAAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQYMCIGCAACVDAC 317 RGEPR MP A++ D + GDCIDCTMCVQVCP GIDIR GLQY CIGCAACVDAC Sbjct: 243 QKRGEPRGMPGKSASETDK--KLGDCIDCTMCVQVCPVGIDIRDGLQYECIGCAACVDAC 300 Query: 318 DSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILGAVIALFAGSLWV 377 +SVMDK+ PRGLIRYST+NA+ S E+RRR RPR+LIY IL A++ +F +L + Sbjct: 301 NSVMDKVGSPRGLIRYSTDNALANNLSPKEVRRRAFRPRVLIYTGILLAIVIVFVTALAL 360 Query: 378 RTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKGLAGLSVDPATPI 437 RTPLKLDVIRDRG+MGREVE+G+IENVYRLQI+NT E HRY + G+ L + + Sbjct: 361 RTPLKLDVIRDRGAMGREVEDGMIENVYRLQIMNTSESAHRYRISVYGIESLRLVTPDEV 420 Query: 438 EVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVFLVPR 489 ++AAT+T +VP+R+R G GE GSNKI + L+A D L V+E AVF VPR Sbjct: 421 DLAATETRAVPIRLRTDQGQGEPGSNKISVTLQAVDDRRLQVTEDAVFFVPR 472 >ref|YP_001099923.1| putative ferredoxin transmembrane protein [Herminiimonas arsenicoxydans] Length = 466 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/462 (67%), Positives = 374/462 (80%), Gaps = 3/462 (0%) Query: 29 EYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLVFYGLPWINWNERQAVLFDLASRK 88 E +VI+MYAARE+IYPRE +GR+ASLRWLCV+LTQL FYGLPW+NWN RQA+LFDL +RK Sbjct: 7 EVSVIQMYAAREEIYPRETKGRYASLRWLCVWLTQLAFYGLPWLNWNGRQALLFDLTARK 66 Query: 89 FYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRVWCGYSCPQTVYTEIFMWIERRIE 148 FY+FG+VLWPQDFI+LAALLII A+ LFL TA+AGRVWCG++CPQTVYTEIF+WIER IE Sbjct: 67 FYIFGIVLWPQDFIYLAALLIIAAYLLFLVTAIAGRVWCGFACPQTVYTEIFLWIERVIE 126 Query: 149 GNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTGISFVGYFSPIRDLLPEISGFALG 208 G RSARMRLD+QP SF K +K+AKH+AWG VALWTG +FV YF+PI L+ ++ LG Sbjct: 127 GKRSARMRLDKQPASFSKFAKKTAKHMAWGGVALWTGFTFVAYFTPIHTLMQKVLNLGLG 186 Query: 209 PWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQSAMFDRDSLIITYDVARGEPR-MP 267 PWE FWILFY ATYGNAGW+REQVCKYMCPYARFQS+MFD+DSLIITYD RGEPR MP Sbjct: 187 PWELFWILFYALATYGNAGWLREQVCKYMCPYARFQSSMFDKDSLIITYDQKRGEPRGMP 246 Query: 268 AAKAAKLDTGARAGDCIDCTMCVQVCPTGIDIRQGLQYMCIGCAACVDACDSVMDKIKRP 327 A++ D + GDCIDCTMCVQVCP GIDIR GLQY CIGCAACVDAC+SVMDK+ P Sbjct: 247 GKSASETDK--KLGDCIDCTMCVQVCPVGIDIRDGLQYECIGCAACVDACNSVMDKVGSP 304 Query: 328 RGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILGAVIALFAGSLWVRTPLKLDVIR 387 RGLIRYST+NA+ S E+RRR RPR+LIY IL A++ +F +L +RTPLKLDVIR Sbjct: 305 RGLIRYSTDNALANNLSPKEVRRRAFRPRVLIYTGILLAIVIVFVTALALRTPLKLDVIR 364 Query: 388 DRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKGLAGLSVDPATPIEVAATQTVSV 447 DRG+MGREVE+G+IENVYRLQI+NT E HRY + G+ L + +++AAT+T +V Sbjct: 365 DRGAMGREVEDGMIENVYRLQIMNTSESAHRYRISVYGIESLRLVTPDEVDLAATETRAV 424 Query: 448 PVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVFLVPR 489 P+R+R G GE GSNKI + L+A D L V+E AVF VPR Sbjct: 425 PIRLRTDQGQGEPGSNKISVTLQAVDDRRLQVTEDAVFFVPR 466 >ref|YP_004489319.1| cytochrome c oxidase accessory protein CcoG [Delftia sp. Cs1-4] gb|AEF90964.1| cytochrome c oxidase accessory protein CcoG [Delftia sp. Cs1-4] Length = 484 Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust. Identities = 283/496 (57%), Positives = 357/496 (71%), Gaps = 24/496 (4%) Query: 6 MKPRQ-DKEGDPP----------PDTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASL 54 MKP D G PP PD G+ ++ M+ + +++YPR I G FA Sbjct: 1 MKPESGDDTGKPPRKVIPITPATPDPGE---------LVSMFESEKKVYPRSISGVFARW 51 Query: 55 RWLCVFLTQLVFYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFS 114 RW VFLTQLVFYGLPW+ W +RQ VLFDL +R+FYLFGLVL+PQDFI+LA LLII A + Sbjct: 52 RWALVFLTQLVFYGLPWLEWGQRQMVLFDLGTRRFYLFGLVLYPQDFIYLAGLLIISALA 111 Query: 115 LFLFTAVAGRVWCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKH 174 LFLFTAVAGR+WCG+SCPQTVYTEIFMW+ER++EG+RSARMRLD+ W+F+K W+KS K Sbjct: 112 LFLFTAVAGRLWCGFSCPQTVYTEIFMWVERKVEGDRSARMRLDKNGWTFEKAWKKSLKQ 171 Query: 175 LAWGAVALWTGISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVC 234 L W A+ALWTG +FVGYF PIR+L E+ G W+ FW+LFYGFATYGNAG+MREQVC Sbjct: 172 LLWIAIALWTGFTFVGYFVPIRELGGELLALQ-GSWQMFWVLFYGFATYGNAGYMREQVC 230 Query: 235 KYMCPYARFQSAMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARA-GDCIDCTMCVQVC 293 KYMCPYARFQSAMFDRD++I++YD RGEPR P K K+D A+ GDCIDC MCVQVC Sbjct: 231 KYMCPYARFQSAMFDRDTMIVSYDTGRGEPRAPRTK--KVDYKAQGLGDCIDCKMCVQVC 288 Query: 294 PTGIDIRQGLQYMCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLV 353 P GIDIR GLQY CIGC C+DAC+S+MDK++ PRGLIR +T+NA+ + A++ RR+ Sbjct: 289 PVGIDIRNGLQYECIGCGLCIDACNSIMDKMEYPRGLIRLTTQNAMAGLWRRAQVLRRIF 348 Query: 354 RPRILIYGAILGAVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTD 413 RPR+LIY A+L + SL +R +K+DVIRDR S+ R V G +ENVYRLQI+N Sbjct: 349 RPRVLIYSAVLIGLSVAMIVSLALRQSVKVDVIRDRASLSRIVAGGKLENVYRLQIMNAT 408 Query: 414 ERGHRYLVRAKGLAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAED 473 E+ RY + A GL GL + +EV +T + R++ P+G+ E GS+ + +++A Sbjct: 409 EQAQRYRISAHGLDGLELASEQEVEVGPAETRGIAARLQIPYGSAEPGSHTVFFDIDAVH 468 Query: 474 QPALNVSEKAVFLVPR 489 A SEKAVFLVPR Sbjct: 469 SGAGRASEKAVFLVPR 484 >ref|YP_003048155.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] gb|ACT47628.1| cytochrome c oxidase accessory protein CcoG [Methylotenera mobilis JLW8] Length = 481 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 274/484 (56%), Positives = 354/484 (73%), Gaps = 10/484 (2%) Query: 12 KEGDPPPDTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFLTQLVFYGLPW 71 K P + + K E AVI +YAA E+IYPR G F RW+ ++LTQ+VFYG PW Sbjct: 2 KSATNPKASTTTEVAK-EAAVIHLYAAAEKIYPRSTFGFFTKWRWVMIWLTQIVFYGTPW 60 Query: 72 INWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAVAGRVWCGYSC 131 + W RQA+LFDL +++FY+F LVL+PQD I+L A+LII A SLFLFTA+AGR+WCGY+C Sbjct: 61 LAWGNRQALLFDLEAKRFYIFNLVLYPQDLIYLTAILIISALSLFLFTAIAGRLWCGYTC 120 Query: 132 PQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVALWTGISFVGY 191 PQTVYTEIF+WIE +IEG+R+ARM+LD+ S +KL +K +KH W A+++WTG +FVGY Sbjct: 121 PQTVYTEIFLWIEAKIEGDRAARMKLDKSGLSINKLLKKGSKHFVWVALSIWTGFTFVGY 180 Query: 192 FSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYARFQSAMFDRD 251 FSPIR+L + LGPWE+FWI FYGFATYGNAG+MREQVCKYMCPYARFQSAMFD D Sbjct: 181 FSPIRELGTAVVNLGLGPWETFWIGFYGFATYGNAGFMREQVCKYMCPYARFQSAMFDDD 240 Query: 252 SLIITYDVARGEPRMPAAKAAKLD-TGARAGDCIDCTMCVQVCPTGIDIRQGLQYMCIGC 310 +L++TYD ARGEPR +++ K+D T G CIDC+MCVQVCPTGIDIR+GLQY CIGC Sbjct: 241 TLVVTYDEARGEPR--GSRSRKVDSTNHNLGSCIDCSMCVQVCPTGIDIRKGLQYECIGC 298 Query: 311 AACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIYGAILGAVIAL 370 AC D CD+VMDK+ RGLI+YST+NA+ +S ++ +R++RPR++IY AIL ++ Sbjct: 299 GACADVCDTVMDKMGYARGLIKYSTQNAIVNAWSHTQMLKRILRPRVMIYAAILVLLVVT 358 Query: 371 FAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYLVRAKGLAGLS 430 SLW+R P K+DVIRDRG M R E G++ENVYRLQI+N E Y + A GL GL Sbjct: 359 VCTSLWLRDPFKVDVIRDRGVMARLAEGGMLENVYRLQIMNATESAQHYQLSATGLDGLV 418 Query: 431 V-----DPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAEDQPALNVSEKAVF 485 V D + V A +T VPVR++ P G+ + GS+ +R + A + A V+EK++F Sbjct: 419 VQSDVLDANHSVLVNAAETRGVPVRLQIPDGSVKSGSHTVRFSIHAVEDDA-TVTEKSIF 477 Query: 486 LVPR 489 LVPR Sbjct: 478 LVPR 481 >ref|YP_001563802.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] gb|ABX35417.1| cytochrome c oxidase accessory protein CcoG [Delftia acidovorans SPH-1] Length = 484 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 283/496 (57%), Positives = 357/496 (71%), Gaps = 24/496 (4%) Query: 6 MKPRQ-DKEGDPP----------PDTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASL 54 MKP D G PP PD G+ ++ M+ + +++YPR I G FA Sbjct: 1 MKPESGDDTGKPPRKVIPITPATPDPGE---------LVSMFESEKKVYPRSISGVFARW 51 Query: 55 RWLCVFLTQLVFYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFS 114 RW VFLTQLVFYGLPW+ W +RQ VLFDL +R+FYLFGLVL+PQDFI+LA LLII A + Sbjct: 52 RWALVFLTQLVFYGLPWLEWGQRQMVLFDLGARRFYLFGLVLYPQDFIYLAGLLIISALA 111 Query: 115 LFLFTAVAGRVWCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKH 174 LFLFTAVAGR+WCG+SCPQTVYTEIFMW+ER++EG+RSARMRLD+ W+F+K W+KS K Sbjct: 112 LFLFTAVAGRLWCGFSCPQTVYTEIFMWVERKVEGDRSARMRLDKNGWTFEKAWKKSLKQ 171 Query: 175 LAWGAVALWTGISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVC 234 L W A+ALWTG +FVGYF PIR+L E+ G W+ FW+LFYGFATYGNAG+MREQVC Sbjct: 172 LLWIAIALWTGFTFVGYFVPIRELGGELLALQ-GSWQMFWVLFYGFATYGNAGYMREQVC 230 Query: 235 KYMCPYARFQSAMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARA-GDCIDCTMCVQVC 293 KYMCPYARFQSAMFDRD++I++YD RGEPR P K K+D A+ GDCIDC MCVQVC Sbjct: 231 KYMCPYARFQSAMFDRDTMIVSYDTGRGEPRAPRTK--KVDYKAQGLGDCIDCKMCVQVC 288 Query: 294 PTGIDIRQGLQYMCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLV 353 P GIDIR GLQY CIGC C+DAC+S+MDK++ PRGLIR +T+NA+ + A++ RR+ Sbjct: 289 PVGIDIRNGLQYECIGCGLCIDACNSIMDKMEYPRGLIRLTTQNAMAGLWRRAQVLRRIF 348 Query: 354 RPRILIYGAILGAVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTD 413 RPR+LIY A+L + SL +R +K+DVIRDR S+ R V G +ENVYRLQI+N Sbjct: 349 RPRVLIYSAVLIGLSVAMIVSLALRQSVKVDVIRDRASLSRIVAGGKLENVYRLQIMNAT 408 Query: 414 ERGHRYLVRAKGLAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAED 473 E+ RY + A GL GL + +EV +T + R++ P+G+ E GS+ + +++A Sbjct: 409 EQAQRYRISAHGLDGLELASEQEVEVGPAETRGIAARLQIPYGSAEPGSHTVFFDIDAVH 468 Query: 474 QPALNVSEKAVFLVPR 489 A SEKAVFLVPR Sbjct: 469 SGAGRASEKAVFLVPR 484 >gb|EEE75403.1| predicted protein [Populus trichocarpa] Length = 484 Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust. Identities = 283/496 (57%), Positives = 357/496 (71%), Gaps = 24/496 (4%) Query: 6 MKPRQ-DKEGDPP----------PDTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASL 54 MKP D G PP PD G+ ++ M+ + +++YPR I G FA Sbjct: 1 MKPESGDDIGKPPRKVIPITPATPDPGE---------LVSMFESEKKVYPRSISGVFARW 51 Query: 55 RWLCVFLTQLVFYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFS 114 RW VFLTQLVFYGLPW+ W +RQ VLFDL +R+FYLFGLVL+PQDFI+LA LLII A + Sbjct: 52 RWALVFLTQLVFYGLPWLEWGQRQMVLFDLGARRFYLFGLVLYPQDFIYLAGLLIISALA 111 Query: 115 LFLFTAVAGRVWCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKH 174 LFLFTAVAGR+WCG+SCPQTVYTEIFMW+ER++EG+RSARMRLD+ W+F+K W+KS K Sbjct: 112 LFLFTAVAGRLWCGFSCPQTVYTEIFMWVERKVEGDRSARMRLDKNGWTFEKAWKKSLKQ 171 Query: 175 LAWGAVALWTGISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVC 234 L W A+ALWTG +FVGYF PIR+L E+ G W+ FW+LFYGFATYGNAG+MREQVC Sbjct: 172 LLWIAIALWTGFTFVGYFVPIRELGGELLALQ-GSWQMFWVLFYGFATYGNAGYMREQVC 230 Query: 235 KYMCPYARFQSAMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARA-GDCIDCTMCVQVC 293 KYMCPYARFQSAMFDRD++I++YD RGEPR P K K+D A+ GDCIDC MCVQVC Sbjct: 231 KYMCPYARFQSAMFDRDTMIVSYDTGRGEPRAPRTK--KVDYKAQGLGDCIDCKMCVQVC 288 Query: 294 PTGIDIRQGLQYMCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLV 353 P GIDIR GLQY CIGC C+DAC+S+MDK++ PRGLIR +T+NA+ + A++ RR+ Sbjct: 289 PVGIDIRNGLQYECIGCGLCIDACNSIMDKMEYPRGLIRLTTQNAMAGLWRRAQVLRRIF 348 Query: 354 RPRILIYGAILGAVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTD 413 RPR+LIY A+L + SL +R +K+DVIRDR S+ R V G +ENVYRLQI+N Sbjct: 349 RPRVLIYSAVLIGLSVAMIVSLALRQSVKVDVIRDRASLSRIVAGGKLENVYRLQIMNAT 408 Query: 414 ERGHRYLVRAKGLAGLSVDPATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIELEAED 473 E+ RY + A GL GL + +EV +T + R++ P+G+ E GS+ + +++A Sbjct: 409 EQAQRYRISAHGLDGLELASEQEVEVGPAETRGIAARLQIPYGSAEPGSHTVFFDIDAVH 468 Query: 474 QPALNVSEKAVFLVPR 489 A SEKAVFLVPR Sbjct: 469 SGAGRASEKAVFLVPR 484 >ref|ZP_08402393.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] gb|EGJ10726.1| cytochrome c oxidase accessory protein CcoG [Rubrivivax benzoatilyticus JA2] Length = 496 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 275/497 (55%), Positives = 363/497 (73%), Gaps = 17/497 (3%) Query: 7 KPRQDKEGDPPP-----DTGDNKTGKDEYAVIRMYAAREQIYPREIQGRFASLRWLCVFL 61 + R D + P P D G AV+ +Y ++IY R + G F RW V++ Sbjct: 3 QARADLDNRPVPASAASDEAPATAGAATEAVVSLYVKSKRIYARSVSGWFNGWRWALVWI 62 Query: 62 TQLVFYGLPWINWNERQAVLFDLASRKFYLFGLVLWPQDFIWLAALLIICAFSLFLFTAV 121 TQLVFYGLPW++WN RQAVLFDL +R+FY+FGLVL+PQD I+L+ALL+I A++LFLFTAV Sbjct: 63 TQLVFYGLPWLDWNARQAVLFDLGARRFYIFGLVLYPQDLIYLSALLMISAYALFLFTAV 122 Query: 122 AGRVWCGYSCPQTVYTEIFMWIERRIEGNRSARMRLDRQPWSFDKLWRKSAKHLAWGAVA 181 AGR+WCGY+CPQTVYTEIFMW+ERR EG+R+ARMRLD PW+F +LWRKSA W +A Sbjct: 123 AGRLWCGYACPQTVYTEIFMWVERRFEGDRNARMRLDAGPWNFQRLWRKSATQTVWILIA 182 Query: 182 LWTGISFVGYFSPIRDLLPEISGFALGPWESFWILFYGFATYGNAGWMREQVCKYMCPYA 241 LWTG++FVGYF+PIR+LLP F+LGPWE+FW LFYGFAT+GNAG+MREQVCKYMCPYA Sbjct: 183 LWTGLTFVGYFTPIRELLPSAFAFSLGPWETFWTLFYGFATWGNAGYMREQVCKYMCPYA 242 Query: 242 RFQSAMFDRDSLIITYDVARGEPRMPAAKAAKLDTGARA-GDCIDCTMCVQVCPTGIDIR 300 RFQSAMFD+D+LI++YD RG+PR ++ K+D ++ GDCIDC +CVQVCPTGIDIR Sbjct: 243 RFQSAMFDKDTLIVSYDAERGDPR--GTRSRKVDARSQGLGDCIDCGLCVQVCPTGIDIR 300 Query: 301 QGLQYMCIGCAACVDACDSVMDKIKRPRGLIRYSTENAVEQGFSTAEIRRRLVRPRILIY 360 GLQY CIGC AC+D C+ VMDK+K PRGLIRY+T+N + Q + ++ +R+ RPR+L+Y Sbjct: 301 DGLQYECIGCTACIDVCNGVMDKMKYPRGLIRYATQNGMAQHQTRGQMLQRVFRPRVLVY 360 Query: 361 GAILGAVIALFAGSLWVRTPLKLDVIRDRGSMGREVEEGIIENVYRLQIINTDERGHRYL 420 AIL ++ FA SL +R P ++DV+RDR S+ R V++G IEN+YRLQ++N E RY Sbjct: 361 TAILFVIVGAFAASLALRHPFRVDVVRDRASLARIVDDGYIENLYRLQVMNATESPQRYR 420 Query: 421 VRAKGLAGLSVD--PATPIEVAATQTVSVPVRVRAPHGAGEVGSNKIRIEL------EAE 472 VRA+GLAG+ +D P ++ A + V++ +RV P A + G I+ +A Sbjct: 421 VRAEGLAGMVIDGQPEFDVDSAGARWVTIALRV-PPQTATQAGPGAHTIQFHVDRLPDAR 479 Query: 473 DQPALNVSEKAVFLVPR 489 D ++ SE + F+VPR Sbjct: 480 DPSSVVASENSTFVVPR 496