BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0133.p (491 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776577.1| outer membrane protein [Herbaspirillum serop... 956 0.0 ref|ZP_08387550.1| efflux transporter, outer membrane factor (OM... 457 e-126 ref|YP_001672155.1| RND efflux system outer membrane lipoprotein... 439 e-121 ref|YP_001264989.1| RND efflux system outer membrane lipoprotein... 417 e-114 ref|YP_003559356.1| outer membrane protein OprN [Sphingobium jap... 400 e-109 ref|YP_372948.1| RND efflux system outer membrane lipoprotein [B... 399 e-109 ref|YP_001859561.1| RND efflux system outer membrane lipoprotein... 395 e-108 ref|YP_775163.1| RND efflux system outer membrane lipoprotein [B... 394 e-107 ref|YP_004555078.1| NodT family RND efflux system outer membrane... 393 e-107 ref|YP_001810476.1| RND efflux system outer membrane lipoprotein... 392 e-107 >ref|YP_003776577.1| outer membrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64669.1| outer membrane protein [Herbaspirillum seropedicae SmR1] Length = 491 Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/491 (99%), Positives = 489/491 (99%) Query: 1 MINMDKTSSSFPAARLIALAAAALLAGCALGPDYAGPPEAAPQAAHSGQFVRGGDSATTT 60 MINMDKTSSSFPAARLIALAAAALLAGCALGPDYAGPPEAAPQAAH GQFVRGGDSATTT Sbjct: 1 MINMDKTSSSFPAARLIALAAAALLAGCALGPDYAGPPEAAPQAAHGGQFVRGGDSATTT 60 Query: 61 APINQWWQGLGDAQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPGVGASALA 120 APINQWWQGLGDAQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAP VGASALA Sbjct: 61 APINQWWQGLGDAQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPSVGASALA 120 Query: 121 GHARLPPANLGALTGGASSGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAA 180 GHARLPPANLGALTGGASSGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAA Sbjct: 121 GHARLPPANLGALTGGASSGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAA 180 Query: 181 QASLADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQ 240 QASLADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQ Sbjct: 181 QASLADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQ 240 Query: 241 LRIQNQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGD 300 LRIQNQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGD Sbjct: 241 LRIQNQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGD 300 Query: 301 PVSLLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAA 360 PVSLLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAA Sbjct: 301 PVSLLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAA 360 Query: 361 LGAPMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVA 420 LGAPMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVA Sbjct: 361 LGAPMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVA 420 Query: 421 TIARTKVSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQK 480 TIARTK+SADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQK Sbjct: 421 TIARTKLSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQK 480 Query: 481 ALGLGWSDEQG 491 ALGLGWSDEQG Sbjct: 481 ALGLGWSDEQG 491 >ref|ZP_08387550.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] gb|EGI56219.1| efflux transporter, outer membrane factor (OMF) lipo, NodT family protein [Sphingomonas sp. S17] Length = 497 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 263/476 (55%), Positives = 325/476 (68%), Gaps = 17/476 (3%) Query: 28 CALGPDYAGPPEAAPQAAHS-GQFVRGGDSATTTAP-INQWWQGLGDAQLTSLIERALQA 85 C +GP+YAGPP+ AA F R S TTAP + +WW L D LT L E+AL A Sbjct: 16 CTVGPNYAGPPKGVGSAAQPPAGFARADASVATTAPAVAEWWTTLNDPMLTWLEEQALAA 75 Query: 86 NPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGASSGNGSPT 145 NPN+ +A+ARL+Q+RA L LE+AN AP ASA HA LP NLG G Sbjct: 76 NPNVAVAQARLKQARASLRLERANQAPNANASATYLHADLPGINLGGGQQQGGGEQGGGQ 135 Query: 146 ---------------SANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVS 190 S + ++LGFDASWEIDLFGG+RR V+AA A A AA+A++AD QVS Sbjct: 136 GGANGGAAGGGSGGQSLDFFNLGFDASWEIDLFGGQRRTVEAARANAAAAEANVADAQVS 195 Query: 191 LAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDAS 250 L+A+VA AY+ LRD QQRL L ++A + Q L LT QR GTAS L+ R++NQ++++ Sbjct: 196 LSADVAQAYVGLRDAQQRLILAREASRMQRDTLNLTQQRFNNGTASQLEVERLRNQVEST 255 Query: 251 RADLVPLQADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRRRPD 310 A ++PL A + YLN LA L+G+ PGTLD L PVPLPP QVAVGDP SLL+RRPD Sbjct: 256 DAQILPLSASVETYLNALAILIGEAPGTLDQRLGQAAPVPLPPAQVAVGDPTSLLQRRPD 315 Query: 311 VRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNF 370 +RAAER LAA TA+IG AEAA++P L L G+IG+GGT LT LD+ LGAPML WN Sbjct: 316 IRAAERRLAAQTARIGVAEAAKFPRLNLMGIIGIGGTSLDALTDLDNLVTLGAPMLQWNV 375 Query: 371 LDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSAD 430 L+FGRA ARV QAE RDEAE +YR +VL ALRDAEDAL+RFR R +VAT+AR K SAD Sbjct: 376 LNFGRANARVGQAEGARDEAEAQYRGAVLSALRDAEDALARFRARRNTVATLARAKASAD 435 Query: 431 RALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGW 486 R+ L +QRY+AG TLI+ LD RQ+++AQQ+L QA A LT +V +QKALGLGW Sbjct: 436 RSAVLMQQRYRAGAATLIDTLDAERQRVSAQQSLSQAVAGLTNDYVALQKALGLGW 491 >ref|YP_001672155.1| RND efflux system outer membrane lipoprotein [Caulobacter sp. K31] gb|ABZ74496.1| RND efflux system, outer membrane lipoprotein, NodT family [Caulobacter sp. K31] Length = 482 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 255/467 (54%), Positives = 325/467 (69%), Gaps = 6/467 (1%) Query: 24 LLAGCALGPDYAGPPEAAPQAAHSGQFVRGGDSATTTAP-INQWWQGLGDAQLTSLIERA 82 +L+ C +GPDY GPP+ S +FVR D+A P + +WW+ L D L + ERA Sbjct: 14 VLSACTVGPDYVGPPDKG----ISSRFVRMEDTAVIATPLVARWWETLDDPILDGIEERA 69 Query: 83 LQANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGASSGNG 142 L+ANPN+ ++ARL+Q+RA L +E+ANAAP V A ALAGH R+P + GA + G Sbjct: 70 LRANPNMAASQARLRQARAMLRIERANAAPNVAAGALAGHGRVPESGSGAAGAMIPALVG 129 Query: 143 SPT-SANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVSLAAEVANAYIS 201 + S +LY+ FDASWEIDLFGGRRR V+AATATA AA+A+LAD QVSL AEVA+AYI Sbjct: 130 TDERSFDLYTAAFDASWEIDLFGGRRRGVEAATATAQAAEATLADAQVSLTAEVAHAYIG 189 Query: 202 LRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQADR 261 LRD Q+R+ L +++V+ Q+QML LT Q+ ERG AS+LD R+ Q + + A + PL A Sbjct: 190 LRDTQKRIVLAKRSVELQQQMLDLTRQQFERGVASALDVERLSMQFENTNARVAPLVAQA 249 Query: 262 DAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTLAAD 321 + ++N LA L G++PG LD L P PLPP VA+GDP ++LRRRPDVRAAER LAAD Sbjct: 250 EGFMNALAWLCGEQPGALDAILDPPRPAPLPPPAVAIGDPEAMLRRRPDVRAAERRLAAD 309 Query: 322 TAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKARVT 381 TA+IG AEAAR+P L GVIG+GGT PSDLT LDDF ALGAP L W+ L+FGR + ++ Sbjct: 310 TARIGVAEAARFPRLSWMGVIGIGGTQPSDLTHLDDFVALGAPTLQWSVLNFGRVQGQIR 369 Query: 382 QAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSADRALALARQRYQ 441 Q E RDEAE Y +VL ALRD EDAL+RFR GR +VA +AR K SADR+ L +Q Y+ Sbjct: 370 QRESARDEAEALYDAAVLGALRDTEDALARFRAGRATVAILARAKASADRSANLTQQNYR 429 Query: 442 AGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGWSD 488 AG +LI+ L R +I A+ L A A LT +V +QKALGLGW D Sbjct: 430 AGRASLIDALGAERHRIDAEDGLSAATAGLTADYVALQKALGLGWLD 476 >ref|YP_001264989.1| RND efflux system outer membrane lipoprotein [Sphingomonas wittichii RW1] gb|ABQ70851.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingomonas wittichii RW1] Length = 480 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 251/468 (53%), Positives = 315/468 (67%), Gaps = 5/468 (1%) Query: 24 LLAGCALGPDYAGPPEAAPQAAHSGQFVRGGDSATTTAPINQWWQGLGDAQLTSLIERAL 83 LLAGC +GPDY GP A + D+A WW LGD L L RAL Sbjct: 12 LLAGCTVGPDYRGPVSAGAAPPPAAFARADRDAAPQAPAAAAWWTALGDPVLDELERRAL 71 Query: 84 QANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGASSGNGS 143 +P++ IA+ARL Q+R+ L LE+AN+ P ASA+ HAR+P +LG+ +G G Sbjct: 72 AGSPSVAIAQARLNQARSALGLERANSLPKANASAVYVHARVPGVDLGSSNQNGGTGGGG 131 Query: 144 PT-----SANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVSLAAEVANA 198 T S N Y++GFDASWEIDLFGG+RR ++AA A+ AA+A+LAD +VSLAAEVA A Sbjct: 132 GTGEDQESLNFYNVGFDASWEIDLFGGQRRNLEAARASLGAAEANLADARVSLAAEVAQA 191 Query: 199 YISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQ 258 Y++LRDRQ RL L +++ + Q + LT +R +RG AS+LD R + Q++ S A ++PL Sbjct: 192 YVALRDRQHRLELARESAEKQRAIYDLTAERRDRGAASTLDVERQRGQVEQSNAAVLPLG 251 Query: 259 ADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTL 318 AD DAY N LATL G+ PG LD LAA VPLPP +VAVGDP +LL+RRPDVRAAER L Sbjct: 252 ADYDAYRNALATLTGEVPGALDDLLAAPAAVPLPPAEVAVGDPAALLQRRPDVRAAERKL 311 Query: 319 AADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKA 378 AA TAKIG A+AA +P L G+IGLGGT D+ D AA+ P LSWNFLDFGR A Sbjct: 312 AASTAKIGVAKAAAFPRLSFLGLIGLGGTSIGDVVDPDKLAAVAVPQLSWNFLDFGRNAA 371 Query: 379 RVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSADRALALARQ 438 RV QAE RDEA +YR +VL ALRDAEDALSR+ R +V T AR+K SAD + L RQ Sbjct: 372 RVGQAEGARDEAAAQYRSAVLVALRDAEDALSRYGARRQAVVTAARSKASADTSATLVRQ 431 Query: 439 RYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGW 486 R+ AGT T IE+LD RQ+I A Q L+QA+A +T F+ ++KALGLGW Sbjct: 432 RFDAGTATRIELLDAERQRIAADQALIQAKAQMTTDFIALEKALGLGW 479 >ref|YP_003559356.1| outer membrane protein OprN [Sphingobium japonicum UT26S] dbj|BAI98624.1| outer membrane protein OprN [Sphingobium japonicum UT26S] Length = 479 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 267/460 (58%), Positives = 328/460 (71%), Gaps = 3/460 (0%) Query: 28 CALGPDYAGPPEAAPQAAHSGQFVRG-GDSATTTAPINQWWQGLGDAQLTSLIERALQAN 86 C GPDY GP EAA + + QF R D++ WW LGD L +L RAL AN Sbjct: 21 CTAGPDYHGP-EAARPVSPAAQFARAPTDASAQAPASAAWWTALGDPVLDALESRALAAN 79 Query: 87 PNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGASSGNGSPTS 146 P + +A AR++Q+RA L E+ANA P V ASAL HA +P +LG+ +S G G S Sbjct: 80 PGVAVAEARVRQARASLRTERANALPNVNASALYVHATVPGVDLGSSEEDSSEG-GDSQS 138 Query: 147 ANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVSLAAEVANAYISLRDRQ 206 N Y+LGFDASWE+DL+GGRRR ++AA A +AAQA++AD QVSL AE+A AY++LRDRQ Sbjct: 139 LNFYNLGFDASWEVDLWGGRRRGMEAARAEVEAAQANVADAQVSLTAEIAQAYVNLRDRQ 198 Query: 207 QRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQADRDAYLN 266 QR+AL QQA Q +ML+LT QR +GTAS+L+ + +NQL+ S A L+PL A+RDAYLN Sbjct: 199 QRIALAQQAAARQREMLRLTEQRHAQGTASALEVEQQRNQLEQSDAALLPLSAERDAYLN 258 Query: 267 QLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTLAADTAKIG 326 LATL G+ PG LD LAA PVPLPP QVAVGDP +LLRRRPD+RAAER AA TA+IG Sbjct: 259 ALATLAGEAPGALDAMLAAPAPVPLPPAQVAVGDPAALLRRRPDIRAAERRFAAATARIG 318 Query: 327 QAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKARVTQAERV 386 AEAAR+PSL G+IG+GGT P DL LD AA+ P LSW+FLDFGR ARV QAE Sbjct: 319 VAEAARFPSLSFMGLIGIGGTDPGDLVDLDTLAAIAMPRLSWSFLDFGRNAARVGQAEGA 378 Query: 387 RDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSADRALALARQRYQAGTGT 446 RDEA +YRQ+VL ALRD+EDALSRF R+SVA+ AR+K SADRA AL RQR++AGT T Sbjct: 379 RDEAAAQYRQAVLNALRDSEDALSRFGARRLSVASAARSKASADRAAALVRQRFEAGTAT 438 Query: 447 LIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGW 486 I++LD RQ + A Q L Q A +T ++ +QKALGLGW Sbjct: 439 RIQLLDAERQSLAAAQALTQGTAAMTADYIALQKALGLGW 478 >ref|YP_372948.1| RND efflux system outer membrane lipoprotein [Burkholderia sp. 383] gb|ABB12304.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia sp. 383] Length = 495 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 228/483 (47%), Positives = 304/483 (62%), Gaps = 16/483 (3%) Query: 16 LIALAAAALLAGCALGPDYAGPPEAAPQAAHSGQFVRGGDSA-TTTAPI-NQWWQGLGDA 73 L AAA LLAGC +GPDY G P AAP A FVR S T AP + WW L D Sbjct: 12 LTLCAAACLLAGCTVGPDYRGAP-AAPDAP---TFVRAPASGFDTAAPAPSAWWHALNDR 67 Query: 74 QLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLP------- 126 QL LI AL NP+L A+ARL+ SRA L+ ++A P A+ A R P Sbjct: 68 QLDDLITAALAYNPDLHAAQARLRASRAQLSQQRAAQLPKSSATVAAIRMREPDVSALGS 127 Query: 127 --PANLGALTGGASSGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASL 184 P+N + +GG S G LYS GFDA+WEIDLFGG RRAV+AA+A A+A A L Sbjct: 128 LLPSNGSSQSGGTSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVDADL 187 Query: 185 ADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQ 244 AD QVS+AAEVANAY+ LRD+QQRLAL Q+ + Q+QML+LT QR RG A+ +D R+ Sbjct: 188 ADTQVSIAAEVANAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRVRGVAADVDIERLT 247 Query: 245 NQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAAT-VPVPLPPQQVAVGDPVS 303 Q++ +RA L+PL A L++LA L G+ PG LD L+ + P+P P VA+GDP + Sbjct: 248 TQVETTRASLIPLDAQVTESLDRLAILTGRAPGALDATLSTSDAPLPTLPGSVAIGDPAT 307 Query: 304 LLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGA 363 LL++RPD+RAAER LA+ A+IG+ A +P + L G +G T P L R +F +GA Sbjct: 308 LLKQRPDIRAAERRLASSNAQIGEHVADYFPKVTLLGDLGFSATDPGHLFRKQNFTWVGA 367 Query: 364 PMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIA 423 P L WN LDFGR + V AE RDEAE Y+++VL AL+DA AL R+ + R V + Sbjct: 368 PYLQWNILDFGRTRGAVRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVVALT 427 Query: 424 RTKVSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALG 483 + + SA + L +RY+AG ++I++LDT R+ ++AQQN++ +A L + +V +QK+LG Sbjct: 428 KVQTSAVHSRTLMDERYRAGVASMIDLLDTQREALSAQQNVIAGQAELIKDYVSVQKSLG 487 Query: 484 LGW 486 LGW Sbjct: 488 LGW 490 >ref|YP_001859561.1| RND efflux system outer membrane lipoprotein [Burkholderia phymatum STM815] gb|ACC72515.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia phymatum STM815] Length = 494 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 226/468 (48%), Positives = 305/468 (65%), Gaps = 8/468 (1%) Query: 20 AAAALLAGCALGPDYAGPPEAAPQAAHSGQFVRGGDSATTTAP-INQWWQGLGDAQLTSL 78 A LLAGC +GPDY G AP H F R D TAP + WW LGD QLT+L Sbjct: 27 AVTVLLAGCTVGPDYKG----APATTHVSSFKRAPDGVVQTAPGVAAWWLALGDPQLTAL 82 Query: 79 IERALQANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGAS 138 I+ + +P+L A+AR++Q+RAGL+ +Q+N P VGASA R P + + +S Sbjct: 83 IDAGIANSPDLRAAQARVRQARAGLSQQQSNELPKVGASAAYLRTREPDLSSLSGGSSSS 142 Query: 139 SGNGSPTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVSLAAEVANA 198 G G P + LY GFDASWE+DLFGG RRAV+AA+A ADA+QA LAD V LAAE+ +A Sbjct: 143 GGRG-PIA--LYLAGFDASWELDLFGGTRRAVEAASAQADASQAELADAHVQLAAEIGSA 199 Query: 199 YISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQ 258 Y+ LRD+QQ +A+ +++ + + ++L LT QR +RG AS LD R++ Q++ +R L+PL Sbjct: 200 YVGLRDQQQSMAIVRKSAELEARVLTLTEQRRDRGVASQLDVERVRTQVENTRNALIPLD 259 Query: 259 ADRDAYLNQLATLLGQEPGTLDGELAATVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTL 318 A L++LA L G+EPG LD EL A+ P+P PQ +AVGDP LLRRRPDVRAAER L Sbjct: 260 AQIAESLDELAVLTGREPGALDDELNASAPLPALPQTIAVGDPAQLLRRRPDVRAAERRL 319 Query: 319 AADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKA 378 A+ +A+IG+ EA +P + LFG + P L R ++F L P L WN DFGR KA Sbjct: 320 ASQSAQIGEREADWFPKVTLFGSLAFSAADPGHLVRKNNFTWLAVPYLQWNAFDFGRTKA 379 Query: 379 RVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSADRALALARQ 438 RV Q+ DEA+ KY +VL ALRDA+ ALSR+ + R +V ++ + SA RA L Q Sbjct: 380 RVDQSRAALDEAQAKYESTVLGALRDADVALSRYGHERENVVSLRTVESSATRAATLTEQ 439 Query: 439 RYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGW 486 RY+AGT T ++ LD R + TA+QN +Q++A L + +V +QK+LGLGW Sbjct: 440 RYRAGTATALDWLDAERTRYTAEQNRIQSDAQLIKDYVALQKSLGLGW 487 >ref|YP_775163.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria AMMD] gb|ABI88829.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria AMMD] Length = 495 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/491 (46%), Positives = 305/491 (62%), Gaps = 22/491 (4%) Query: 16 LIALAAAALLAGCALGPDYAGPPEAAPQAAHSGQFVRG---GDSATTTAPINQWWQGLGD 72 L AAA LLAGC +GPDY G P AAP A FVR G +T AP + WW LGD Sbjct: 12 LTLCAAACLLAGCTVGPDYRGAP-AAPDAP---TFVRAPATGVDSTAPAP-SAWWHALGD 66 Query: 73 AQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGA 132 QL LI AL NP+L A+ARL+ SRA L+ ++A P A+ A AR P ++ A Sbjct: 67 RQLDDLIAAALAHNPDLQAAQARLRASRAQLSQQRAAQLPKSSATVAAIRAREP--DVSA 124 Query: 133 LTGGASSGNGS-----------PTSANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQ 181 L SGN + LYS GFDA+WEIDLFGG RRAV+AA+A A+A Sbjct: 125 LGSMLPSGNSNQSGGSSPSLGGSGPLQLYSAGFDATWEIDLFGGTRRAVEAASAQAEAVD 184 Query: 182 ASLADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQL 241 A LAD QVS+AAEVA AY+ LRD+QQRLAL Q+ + Q+QML+LT QR RG A+ +D Sbjct: 185 ADLADTQVSIAAEVATAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRARGVAADVDIE 244 Query: 242 RIQNQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAAT-VPVPLPPQQVAVGD 300 R+ Q++ +RA L+PL A L++LA L G+ PG LD L+A+ P+P P V VGD Sbjct: 245 RLTTQVENTRASLIPLDAQVTESLDRLAILTGRAPGALDAALSASGTPLPTLPGSVPVGD 304 Query: 301 PVSLLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAA 360 P +LL++RPD+RAAER LA+ A++G+ A +P + L G +G T P L R +F Sbjct: 305 PAALLKQRPDIRAAERRLASSNAQVGEHIADYFPKVTLLGDLGFSATDPGHLFRKQNFTW 364 Query: 361 LGAPMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVA 420 +GAP L WN LDFGR + + AE RDEAE Y+++VL AL+DA AL R+ + R V Sbjct: 365 IGAPYLQWNILDFGRTRGAIRAAEASRDEAEANYQKAVLGALQDANTALQRYGHQREHVI 424 Query: 421 TIARTKVSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQK 480 +A+ + SA + L QRY+AG + I++LDT R+ + AQQN++ +A L + +V +QK Sbjct: 425 ALAKVQTSATHSATLMDQRYRAGVASTIDLLDTQREALAAQQNVIAGKAELVKDYVSLQK 484 Query: 481 ALGLGWSDEQG 491 +LGLGW G Sbjct: 485 SLGLGWQTNAG 495 >ref|YP_004555078.1| NodT family RND efflux system outer membrane lipoprotein [Sphingobium chlorophenolicum L-1] gb|AEG50572.1| RND efflux system, outer membrane lipoprotein, NodT family [Sphingobium chlorophenolicum L-1] Length = 476 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 261/462 (56%), Positives = 313/462 (67%), Gaps = 5/462 (1%) Query: 28 CALGPDYAGPPEAAPQAAHSGQFVRG-GDSATTTAPINQWWQGLGDAQLTSLIERALQAN 86 C GPDY GP A P A QF R GD+ WW L D L +L RAL AN Sbjct: 16 CTTGPDYRGPETARP-ATPGAQFARASGDTGPQAPAAAAWWTALNDPVLDTLETRALAAN 74 Query: 87 PNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPANLGALTGGASSGNGSPTS 146 P + A AR++Q+RA L E+ANA P ASAL HA +P +L SG GS S Sbjct: 75 PGVAAAEARMRQARASLRSERANALPSTNASALYVHATVPGLDLNDSGDSDQSGGGS-ES 133 Query: 147 ANLYSLGFDASWEIDLFGGRRRAVQAATATADAAQASLADVQVSLAAEVANAYISLRDRQ 206 N Y+LGFDASWE DL+GG+RR V+AA A DAAQA +AD QVSL AE+A AY+ LRDRQ Sbjct: 134 LNFYNLGFDASWEADLWGGKRRGVEAARAQLDAAQADVADAQVSLTAEIAQAYVHLRDRQ 193 Query: 207 QRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRIQNQLDASRADLVPLQADRDAYLN 266 QR+AL + A+ Q +ML+LT QR +GTAS+LD R ++ + + A L PL A+RD YLN Sbjct: 194 QRIALARDALARQREMLRLTEQRHAQGTASALDVERQRHLAEQADAALPPLAAERDGYLN 253 Query: 267 QLATLLGQEPGTLDGELAA--TVPVPLPPQQVAVGDPVSLLRRRPDVRAAERTLAADTAK 324 LATL G+ PG LDG LAA VPLPP QVAVGDP LL+RRPDVRAAER AA TAK Sbjct: 254 ALATLAGEAPGALDGMLAAPSKAIVPLPPAQVAVGDPAELLKRRPDVRAAERRFAAATAK 313 Query: 325 IGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALGAPMLSWNFLDFGRAKARVTQAE 384 IG AEAAR+PS+ G+IG+GGT P DL D AA+ P LSW+FLDFGR ARV QAE Sbjct: 314 IGVAEAARFPSISFMGLIGIGGTSPGDLVDFDKLAAIAMPRLSWSFLDFGRNAARVGQAE 373 Query: 385 RVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATIARTKVSADRALALARQRYQAGT 444 RDEA YRQ+VL+ALRD EDALSRF GR+SVA+ AR+K SADR AL RQR++AG Sbjct: 374 GARDEAAAHYRQAVLDALRDGEDALSRFGNGRLSVASAARSKASADRTAALTRQRFEAGA 433 Query: 445 GTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKALGLGW 486 T I++LD RQ ++A Q+L QA A +T ++ +QKALGLGW Sbjct: 434 ATRIQLLDAERQSLSAAQSLSQATAAMTADYIALQKALGLGW 475 >ref|YP_001810476.1| RND efflux system outer membrane lipoprotein [Burkholderia ambifaria MC40-6] gb|ACB66260.1| RND efflux system, outer membrane lipoprotein, NodT family [Burkholderia ambifaria MC40-6] Length = 495 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 229/489 (46%), Positives = 304/489 (62%), Gaps = 18/489 (3%) Query: 16 LIALAAAALLAGCALGPDYAGPPEAAPQAAHSGQFVRG---GDSATTTAPINQWWQGLGD 72 L AAA LLAGC +GPDY G P AAP A FVR G + T AP + WW LGD Sbjct: 12 LTLCAAACLLAGCTVGPDYRGAP-AAPDAP---TFVRAPATGVDSNTPAP-SAWWHALGD 66 Query: 73 AQLTSLIERALQANPNLGIARARLQQSRAGLALEQANAAPGVGASALAGHARLPPAN-LG 131 QL LI AL NP+L A+ARL+ SRA L+ +A P A+ A AR P + LG Sbjct: 67 RQLDDLIAAALAHNPDLQAAQARLRASRAQLSQRRAAQLPKSSATVAAIRAREPDVSALG 126 Query: 132 ALTGGASSGNGSPTSA--------NLYSLGFDASWEIDLFGGRRRAVQAATATADAAQAS 183 +L +S +S LYS FDA+WEIDLFGG RRAV+AA+A A+A A Sbjct: 127 SLLPPGNSNQSDGSSPSLGGSGPLQLYSASFDATWEIDLFGGTRRAVEAASAQAEAVDAD 186 Query: 184 LADVQVSLAAEVANAYISLRDRQQRLALGQQAVQAQEQMLQLTGQRVERGTASSLDQLRI 243 LAD QVS+AAEVA AY+ LRD+QQRLAL Q+ + Q+QML+LT QR RG A+ +D R+ Sbjct: 187 LADTQVSIAAEVATAYVDLRDQQQRLALSQRTAELQQQMLELTQQRRARGVAADVDIERL 246 Query: 244 QNQLDASRADLVPLQADRDAYLNQLATLLGQEPGTLDGELAAT-VPVPLPPQQVAVGDPV 302 Q++ +RA ++PL A L++LA L G+ PG LD L+A+ P+P P V VGDP Sbjct: 247 TTQVETTRASVIPLDAQVTESLDRLAILTGRAPGALDAALSASGAPLPTLPGSVPVGDPA 306 Query: 303 SLLRRRPDVRAAERTLAADTAKIGQAEAARYPSLKLFGVIGLGGTHPSDLTRLDDFAALG 362 +LL++RPD+RAAER LA+ A+IG+ A +P + L G +G T P L R +F +G Sbjct: 307 ALLKQRPDIRAAERRLASSNAQIGEHIADYFPKVTLLGDLGFSATDPGHLFRKQNFTWVG 366 Query: 363 APMLSWNFLDFGRAKARVTQAERVRDEAEMKYRQSVLEALRDAEDALSRFRYGRVSVATI 422 AP L WN LDFGR + + AE RDEAE YR++VL AL+DA AL R+ + R V + Sbjct: 367 APYLQWNILDFGRTRGAIRAAEASRDEAEANYRKAVLGALQDANTALQRYGHQREHVVAL 426 Query: 423 ARTKVSADRALALARQRYQAGTGTLIEVLDTTRQQITAQQNLLQAEANLTRSFVGIQKAL 482 + + SA + L QRY+AG ++I++LDT R+ + AQQN++ +A L + +V +QK+L Sbjct: 427 TKVQTSATHSATLMDQRYRAGVASIIDLLDTQREALAAQQNVIAGKAELVKDYVSLQKSL 486 Query: 483 GLGWSDEQG 491 GLGW G Sbjct: 487 GLGWQTNAG 495