BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0118.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776562.1| adenylate kinase-like protein [Herbaspirillu... 386 e-106 gb|AEO77387.1| putative adenylate kinase [Pseudomonas aeruginosa... 237 8e-61 ref|ZP_07046957.1| adenylate kinase -like kinase [Comamonas test... 237 8e-61 ref|NP_253487.1| hypothetical protein PA4799 [Pseudomonas aerugi... 237 8e-61 ref|YP_793262.1| putative adenylate kinase [Pseudomonas aerugino... 237 9e-61 ref|ZP_07795722.1| putative adenylate kinase [Pseudomonas aerugi... 236 1e-60 ref|ZP_04937622.1| hypothetical protein PA2G_05153 [Pseudomonas ... 236 2e-60 ref|ZP_04931795.1| hypothetical protein PACG_04616 [Pseudomonas ... 236 2e-60 ref|YP_003278589.1| adenylate kinase-like kinase [Comamonas test... 235 2e-60 ref|YP_366854.1| adenylate kinase-like kinase [Burkholderia sp. ... 235 3e-60 >ref|YP_003776562.1| adenylate kinase-like protein [Herbaspirillum seropedicae SmR1] gb|ADJ64654.1| adenylate kinase and related kinases protein [Herbaspirillum seropedicae SmR1] Length = 189 Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/188 (99%), Positives = 187/188 (99%) Query: 8 MEDQPPLPEAKKRRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQF 67 M DQPPLPEAKKRRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQF Sbjct: 1 MADQPPLPEAKKRRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQF 60 Query: 68 ESAVREASHGPCWVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTR 127 ESAVREASHGPCWVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTR Sbjct: 61 ESAVREASHGPCWVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTR 120 Query: 128 LSHGNRESLRMAFLSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAF 187 LSHGNRESLRMAFLSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAF Sbjct: 121 LSHGNRESLRMAFLSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAF 180 Query: 188 LLAVDEQD 195 LLAVDEQD Sbjct: 181 LLAVDEQD 188 >gb|AEO77387.1| putative adenylate kinase [Pseudomonas aeruginosa M18] Length = 192 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 114/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGKSTF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKSTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|ZP_07046957.1| adenylate kinase -like kinase [Comamonas testosteroni S44] gb|EFI59421.1| adenylate kinase -like kinase [Comamonas testosteroni S44] Length = 178 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 112/171 (65%), Positives = 135/171 (78%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 RYLV+GTSG+GKSTFA+ LA K+ A YIELD+ YWG WQAVP QF +V EA+ G CW Sbjct: 2 RYLVIGTSGSGKSTFAKKLARKIQASYIELDSHYWGPDWQAVPPEQFRHSVVEATQGACW 61 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVR+LLWSRAT V+WLNYGR TVFSR+ RT+ G+ R RLSHGNRESLRMAF Sbjct: 62 VADGNYSAVRDLLWSRATHVVWLNYGRFTVFSRLLRRTLGHGITRKRLSHGNRESLRMAF 121 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAFLLAV 191 S+DS+LLW+ +T+ KN+ KF+ LRE +AHLQW EF +P +A FL A+ Sbjct: 122 FSKDSVLLWSLSTYAKNQSKFAALREHGEFAHLQWIEFSEPSEASTFLKAI 172 >ref|NP_253487.1| hypothetical protein PA4799 [Pseudomonas aeruginosa PAO1] ref|ZP_01367814.1| hypothetical protein PaerPA_01004967 [Pseudomonas aeruginosa PACS2] ref|YP_002442761.1| putative adenylate kinase [Pseudomonas aeruginosa LESB58] gb|AAG08185.1|AE004893_3 hypothetical protein PA4799 [Pseudomonas aeruginosa PAO1] emb|CAW29937.1| putative adenylate kinase [Pseudomonas aeruginosa LESB58] Length = 192 Score = 237 bits (604), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 114/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGKSTF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKSTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|YP_793262.1| putative adenylate kinase [Pseudomonas aeruginosa UCBPP-PA14] ref|ZP_06881102.1| putative adenylate kinase [Pseudomonas aeruginosa PAb1] gb|ABJ14181.1| putative adenylate kinase [Pseudomonas aeruginosa UCBPP-PA14] gb|EGM14524.1| putative adenylate kinase [Pseudomonas aeruginosa 152504] Length = 192 Score = 237 bits (604), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 114/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGKSTF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKSTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|ZP_07795722.1| putative adenylate kinase [Pseudomonas aeruginosa 39016] gb|EFQ40818.1| putative adenylate kinase [Pseudomonas aeruginosa 39016] dbj|BAK87620.1| putative adenylate kinase [Pseudomonas aeruginosa NCGM2.S1] Length = 192 Score = 236 bits (603), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 114/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGKSTF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKSTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|ZP_04937622.1| hypothetical protein PA2G_05153 [Pseudomonas aeruginosa 2192] gb|EAZ61741.1| hypothetical protein PA2G_05153 [Pseudomonas aeruginosa 2192] gb|EGM18075.1| putative adenylate kinase [Pseudomonas aeruginosa 138244] dbj|GAA20742.1| putative adenylate kinase [Pseudomonas aeruginosa NCMG1179] Length = 192 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGK+TF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKTTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|ZP_04931795.1| hypothetical protein PACG_04616 [Pseudomonas aeruginosa C3719] gb|EAZ55914.1| hypothetical protein PACG_04616 [Pseudomonas aeruginosa C3719] Length = 192 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 113/161 (70%), Positives = 132/161 (81%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 R +VVGTSGAGK+TF+ ALAA+LG ++ELD YWG WQAVPH +FE AV A+ P W Sbjct: 13 RVVVVGTSGAGKTTFSAALAARLGCTHVELDRLYWGPGWQAVPHERFEHAVERATTAPRW 72 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVRELLW RAT V+WLN+GR TVFSRV RT++RGLLRTRLSHGNRESLRMAF Sbjct: 73 VADGNYSAVRELLWGRATHVVWLNFGRWTVFSRVLRRTLARGLLRTRLSHGNRESLRMAF 132 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 SRDSILLW++TTF NR K++ LREDP +AHL+W E +P Sbjct: 133 CSRDSILLWSWTTFAGNRRKYTGLREDPRFAHLRWVEVGEP 173 >ref|YP_003278589.1| adenylate kinase-like kinase [Comamonas testosteroni CNB-2] gb|ACY33293.1| adenylate kinase -like kinase [Comamonas testosteroni CNB-2] Length = 178 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 112/171 (65%), Positives = 135/171 (78%) Query: 21 RYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQAVPHSQFESAVREASHGPCW 80 RYLV+GTSGAGKSTFA+ LA K+ A YIELD+ YWG WQAVP QF+ +V EA+ G CW Sbjct: 2 RYLVIGTSGAGKSTFAKKLARKIRASYIELDSHYWGPDWQAVPPEQFKHSVVEATQGTCW 61 Query: 81 VADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSRGLLRTRLSHGNRESLRMAF 140 VADGNYSAVR+ LWSRAT V+WLNYGR TVFSR+ RT+ G+ R RLSHGNRESLRMAF Sbjct: 62 VADGNYSAVRDELWSRATHVVWLNYGRFTVFSRLLRRTLGDGITRKRLSHGNRESLRMAF 121 Query: 141 LSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQPRQARAFLLAV 191 S+DS+LLW+ +T+ KN+ KF+ LRE +AHLQW EF +P +A FL A+ Sbjct: 122 FSKDSVLLWSLSTYAKNQSKFAALREHGEFAHLQWIEFSEPSEASTFLKAI 172 >ref|YP_366854.1| adenylate kinase-like kinase [Burkholderia sp. 383] gb|ABB06210.1| Adenylate kinase-like kinase [Burkholderia sp. 383] Length = 191 Score = 235 bits (600), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 117/187 (62%), Positives = 142/187 (75%), Gaps = 4/187 (2%) Query: 2 VRRSSVMEDQPPLPEAKKRRYLVVGTSGAGKSTFAQALAAKLGARYIELDAFYWGESWQA 61 +R+++ +++ P+ K R +VVGTSGAGKSTF+ ALAA Y+ELD YWG W A Sbjct: 1 MRQNTQLQNSAPV---KHMRVVVVGTSGAGKSTFSSALAAAAHCPYVELDRLYWGPDWTA 57 Query: 62 VPHSQFESAVREASHGPCWVADGNYSAVRELLWSRATDVIWLNYGRATVFSRVFWRTVSR 121 VP QFE+AV A+ G WVADGNYSAVR+ LWSRAT VIWLN+GR TVFSRV WRT+SR Sbjct: 58 VPPEQFENAVLAATAGDRWVADGNYSAVRDALWSRATHVIWLNFGRRTVFSRVLWRTLSR 117 Query: 122 GLLRTRLSHGNRESLRMAFLSRDSILLWAYTTFEKNRHKFSQLREDPHYAHLQWHEFRQP 181 GL+RT LSHGNRESLRMAF SR+S+LLW+YTTF +NR KF+ LR+DP +AHL W E QP Sbjct: 118 GLMRTELSHGNRESLRMAF-SRESVLLWSYTTFARNRIKFAALRDDPKFAHLHWTEITQP 176 Query: 182 RQARAFL 188 RA + Sbjct: 177 SHTRAVI 183