BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0106.p (662 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776550.1| methyl-accepting chemotaxis sensory transduc... 1116 0.0 ref|YP_004232973.1| methyl-accepting chemotaxis sensory transduc... 657 0.0 ref|YP_968802.1| methyl-accepting chemotaxis sensory transducer ... 654 0.0 ref|YP_004488395.1| methyl-accepting chemotaxis sensory transduc... 633 e-179 ref|YP_001564803.1| Cache sensor-containing methyl-accepting che... 632 e-179 ref|YP_004232972.1| methyl-accepting chemotaxis sensory transduc... 626 e-177 ref|YP_003774401.1| methyl-accepting chemotaxis transmembrane pr... 613 e-173 ref|YP_004488695.1| methyl-accepting chemotaxis sensory transduc... 598 e-169 emb|CBA29166.1| Methyl-accepting chemotaxis citrate transducer [... 598 e-168 ref|YP_001564498.1| Cache sensor-containing methyl-accepting che... 598 e-168 >ref|YP_003776550.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] gb|ADJ64642.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] Length = 684 Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 580/581 (99%), Positives = 580/581 (99%) Query: 1 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQS 60 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEW RSKRVVTGAMKQALKQS Sbjct: 17 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWVRSKRVVTGAMKQALKQS 76 Query: 61 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPY 120 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPY Sbjct: 77 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPY 136 Query: 121 VDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVII 180 VDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVII Sbjct: 137 VDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVII 196 Query: 181 THPNKELALKPVSSLDQTLSAQSLAGMKQGGSATIGGIRYLLFTQPIANTDWSLVVALDY 240 THPNKELALKPVSSLDQTLSAQSLAGMKQGGSATIGGIRYLLFTQPIANTDWSLVVALDY Sbjct: 197 THPNKELALKPVSSLDQTLSAQSLAGMKQGGSATIGGIRYLLFTQPIANTDWSLVVALDY 256 Query: 241 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR 300 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR Sbjct: 257 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR 316 Query: 301 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG 360 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG Sbjct: 317 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG 376 Query: 361 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK 420 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK Sbjct: 377 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK 436 Query: 421 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL 480 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL Sbjct: 437 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL 496 Query: 481 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM 540 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM Sbjct: 497 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM 556 Query: 541 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESG 581 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESG Sbjct: 557 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESG 597 >ref|YP_004232973.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44406.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Acidovorax avenae subsp. avenae ATCC 19860] Length = 620 Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/591 (59%), Positives = 436/591 (73%), Gaps = 4/591 (0%) Query: 13 IFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVLPIVAAAQEA 72 F VR +TL + + QLT HA+ ++EW R K+ +T ++K A+ Q++ +P + AA++A Sbjct: 29 FFVVRGNTLSGLDERIGQLTRLHASELAEWVREKQRITSSLKTAVGQAEPVPFLLAAKQA 88 Query: 73 GSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDATTGKLVVTF 132 G+FDD Y Y DKR + HPMP GYD TARPWYKQAV+AG P LT YVDA+TGKL ++F Sbjct: 89 GAFDDTYFVYADKRNIFAHPMPEGYDGTARPWYKQAVQAGGPALTPAYVDASTGKLTISF 148 Query: 133 AEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHPNKELALKPV 192 EPVG AV+G+D+ LD V R V I P SFAF++ G I+ H ELALKPV Sbjct: 149 VEPVGPAGQPTAVIGTDMHLDTVTRKVNAIHPMEKSFAFLLDGQGNILAHARAELALKPV 208 Query: 193 SSLDQTLSAQSLAGM-KQGGSA--TIGGIRYLLFTQPIANTDWSLVVALDYREATHAIGA 249 +++ L LA + GG A +I G +L+ + T W L +A+D EAT + Sbjct: 209 TAISPALDGAQLARLASDGGRADISIDGAPTMLYAAKVEGTPWILAIAIDRAEATRPVQE 268 Query: 250 LMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRRLDTSGKDEL 309 L+ ++ + VL ++A+ LL+Y ++R LRRL VVR+A+E+IASG+GDLTRRLDT G DEL Sbjct: 269 LLNVAIAITVLCVLAAVGLLTYAVSRQLRRLAVVRDALEDIASGEGDLTRRLDTHGSDEL 328 Query: 310 AQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAGSLEETASAM 369 QI+RAFNHF DKI+ L+ IR ++ESV++++SEIASGN DLS RTEQQA SLEETA+AM Sbjct: 329 TQIARAFNHFVDKIAAVLVRIRASAESVRLATSEIASGNQDLSGRTEQQASSLEETAAAM 388 Query: 370 EELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRKIVDIISVID 429 E+LT+TV+QNA+NARQA LA +AS +A HGG VVGQVV TM I+ SSRKIVDII VID Sbjct: 389 EQLTATVQQNAENARQAKHLAANASQIAAHGGTVVGQVVQTMGGIDASSRKIVDIIGVID 448 Query: 430 GIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGLIDDSVQKVE 489 IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+EIK LIDDSV +V Sbjct: 449 SIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKALIDDSVAQVN 508 Query: 490 TGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQMDEATQQNAA 549 GS+LV AGSTM+EVV SV+RVT IV EIS ASQEQS+GI E+G AV+QMD++TQQNAA Sbjct: 509 AGSRLVQDAGSTMQEVVESVQRVTAIVTEISNASQEQSTGIAEIGGAVSQMDQSTQQNAA 568 Query: 550 LVEQAAAAAKSLQEQAAHLAAVVAGFKLDESGAAHPMSPPPAPA-GAPAAP 599 LVEQA AAA+SLQ+QA LA VVAGFKLD G P PA GAP P Sbjct: 569 LVEQATAAAQSLQQQAHQLADVVAGFKLDAGGTHATGHAHPHPALGAPNHP 619 >ref|YP_968802.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] gb|ABM31028.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] Length = 618 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/590 (59%), Positives = 439/590 (74%), Gaps = 6/590 (1%) Query: 12 NIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVLPIVAAAQE 71 F VR +TL + + QLT HA ++EW + K+ +T ++K A+ Q++ +P + AA++ Sbjct: 28 TFFVVRGNTLSGLDERIGQLTRLHAGELTEWVKEKQRITSSLKTAVGQAEPVPFLLAAKQ 87 Query: 72 AGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDATTGKLVVT 131 AG+FDD Y Y DKR + HPMP GYD TARPWY+QAV+AG P LT YVDA+TGKL ++ Sbjct: 88 AGAFDDTYFVYADKRNIFAHPMPEGYDGTARPWYRQAVQAGGPALTPAYVDASTGKLTIS 147 Query: 132 FAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHPNKELALKP 191 F EPVG AV+G+D+ LD V R V I P SFAF++ G I+ H ELALKP Sbjct: 148 FVEPVGPAGQPTAVIGTDMHLDTVTRKVNAIHPMEKSFAFLLDGQGNILAHAKAELALKP 207 Query: 192 VSSLDQTLSAQSLAGM-KQGGSA--TIGGIRYLLFTQPIANTDWSLVVALDYREATHAIG 248 V+++ L +A + GG A +I +L+ + T W L +A+D EAT + Sbjct: 208 VTAISPALDGAQIARLASDGGRADISIDDAPTMLYAAKVEGTPWILAIAIDRAEATRPVR 267 Query: 249 ALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRRLDTSGKDE 308 L+ ++ + VL ++A+ LL+Y ++R LRRL VVR+A+E+IASG+GDLTRRLDT G DE Sbjct: 268 ELLNVAVAITVLCMLAAVGLLTYAVSRQLRRLAVVRDALEDIASGEGDLTRRLDTHGSDE 327 Query: 309 LAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAGSLEETASA 368 L QISRAFNHF DKI+ L+ IR +SE+V++++SEIASGN DLS RTEQQA SLEETA+A Sbjct: 328 LTQISRAFNHFVDKIAAVLVRIRASSEAVRLATSEIASGNQDLSGRTEQQASSLEETAAA 387 Query: 369 MEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRKIVDIISVI 428 ME+LT+TV+QNA+NARQAN LA +AS +A HGG VVGQVV TM I+ SSRKIVDII VI Sbjct: 388 MEQLTATVQQNAENARQANHLAANASQIAAHGGTVVGQVVQTMGGIDASSRKIVDIIGVI 447 Query: 429 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGLIDDSVQKV 488 D IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAAKEIK LIDDSVQ+V Sbjct: 448 DSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAKEIKSLIDDSVQQV 507 Query: 489 ETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQMDEATQQNA 548 GS+LV AGSTM+EVV SV+RVT IV EIS+ASQEQS+GI E+G+AV+QMD++TQQNA Sbjct: 508 NAGSRLVQDAGSTMQEVVESVQRVTAIVAEISSASQEQSTGIAEIGSAVSQMDQSTQQNA 567 Query: 549 ALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESGAAHPMSPPPAPA-GAPA 597 ALVEQA AAA+SLQ+QA LA VAGF+L+ G+A P PA GAPA Sbjct: 568 ALVEQATAAAQSLQQQAHQLADAVAGFRLEAHGSA--THAPRHPALGAPA 615 >ref|YP_004488395.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia sp. Cs1-4] gb|AEF90040.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia sp. Cs1-4] Length = 610 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 342/581 (58%), Positives = 432/581 (74%), Gaps = 3/581 (0%) Query: 1 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQS 60 V +AM+ L+ AN TV+ L + Q++QL + A + EW +KR++T + QA+ Sbjct: 17 VTVAMLALAIANFLTVQRHVLSTLDDQSRQLVNAQAQVLGEWVATKRLLTHTLAQAVDTP 76 Query: 61 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPY 120 D +V A ++ G F DAY GY DKRM L+ M A YD TARPW++QA++ G+P++TAPY Sbjct: 77 DPRAVVQALRDGGGFSDAYFGYTDKRMFFLNEMAADYDVTARPWFRQALKEGRPIVTAPY 136 Query: 121 VDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVII 180 + + ++ VTFAEPVG N AV+G+DV L VVRTV I+PTP SFAF+V + G I+ Sbjct: 137 LFVSPPEVGVTFAEPVGPAGNPVAVVGTDVLLTTVVRTVGAIRPTPGSFAFLVDEAGAIV 196 Query: 181 THPNKELALKPVSSLDQTLSA---QSLAGMKQGGSATIGGIRYLLFTQPIANTDWSLVVA 237 THP+ L LKPVS+L L A Q+L G +GG +LL+ Q + T+W LVVA Sbjct: 197 THPDPALTLKPVSALSPQLRADAIQALPKEDTGMRTAVGGKDFLLYGQGVPGTNWQLVVA 256 Query: 238 LDYREATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDL 297 + EA A+G+L+ +S + ++++ + LL I R+ RRL VVR+A+E+IASGDGDL Sbjct: 257 VQRDEALSALGSLLKVSGAIVAISLILAIALLGAVIARVTRRLAVVRDALEDIASGDGDL 316 Query: 298 TRRLDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQ 357 TRRL G DEL QI+RAFNHF DKI+ L+ IR +SE+V+ +S+EIASGN DLSARTEQ Sbjct: 317 TRRLSVQGNDELTQIARAFNHFTDKIASVLVRIRESSETVRHASTEIASGNQDLSARTEQ 376 Query: 358 QAGSLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINES 417 QA SLEETA+AME+LT+TV+ NA+NARQA QLA SASD+A HGG VV QVV TM I +S Sbjct: 377 QASSLEETAAAMEQLTATVQHNAENARQARQLASSASDIATHGGTVVDQVVRTMGGIEQS 436 Query: 418 SRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEI 477 S +I DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAAKEI Sbjct: 437 SHRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAKEI 496 Query: 478 KGLIDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAV 537 K LIDDSV +V+ GS+LV AG+TM +VV SV+RVT IV EIS ASQEQS+GI E+G AV Sbjct: 497 KALIDDSVGQVDAGSRLVQDAGATMGKVVESVQRVTAIVTEISNASQEQSTGIAEIGTAV 556 Query: 538 NQMDEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLD 578 +QMD++TQQNAALVE+A AAA+SLQ+QAA LA VVAGF+LD Sbjct: 557 SQMDQSTQQNAALVEEATAAAQSLQQQAAQLADVVAGFRLD 597 >ref|YP_001564803.1| Cache sensor-containing methyl-accepting chemotaxis sensory transducer [Delftia acidovorans SPH-1] gb|ABX36418.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia acidovorans SPH-1] Length = 610 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 341/581 (58%), Positives = 432/581 (74%), Gaps = 3/581 (0%) Query: 1 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQS 60 V +AM+ L+ AN TV+ L + Q++QL + A + EW +KR++T + QA+ Sbjct: 17 VTVAMLALAIANFLTVQRHVLSTLDDQSRQLVNAQAQVLGEWVATKRLLTHTLAQAVDTP 76 Query: 61 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPY 120 + +V A ++ G F DAY GY DKRM L+ M A YD TARPW++QA++ G+P++TAPY Sbjct: 77 EPRAVVQALRDGGGFSDAYFGYTDKRMFFLNEMAADYDVTARPWFRQALKEGRPIVTAPY 136 Query: 121 VDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVII 180 + + ++ VTFAEPVG N AV+G+DV L VVRTV I+PTP SFAF+V + G I+ Sbjct: 137 LFVSPPEVGVTFAEPVGPAGNPVAVVGTDVLLTTVVRTVGAIRPTPGSFAFLVDEAGAIV 196 Query: 181 THPNKELALKPVSSLDQTLSA---QSLAGMKQGGSATIGGIRYLLFTQPIANTDWSLVVA 237 THP+ L LKPVS+L L A Q+L G +GG +LL+ Q + T+W LVVA Sbjct: 197 THPDPALTLKPVSALSPQLRADAIQALPKADSGMRTAVGGKDFLLYGQGVPGTNWQLVVA 256 Query: 238 LDYREATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDL 297 + EA A+G+L+ +S + ++++ + LL I R+ RRL VVR+A+E+IASGDGDL Sbjct: 257 VQRDEALSALGSLLKVSGAIVAISLILAIALLGAVIARVTRRLAVVRDALEDIASGDGDL 316 Query: 298 TRRLDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQ 357 TRRL G DEL QI+RAFNHF DKI+ L+ IR +SE+V+ +S+EIASGN DLSARTEQ Sbjct: 317 TRRLSVQGNDELTQIARAFNHFTDKIASVLVRIRESSETVRHASTEIASGNQDLSARTEQ 376 Query: 358 QAGSLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINES 417 QA SLEETA+AME+LT+TV+ NA+NARQA QLA SASD+A HGG VV QVV TM I +S Sbjct: 377 QASSLEETAAAMEQLTATVQHNAENARQARQLASSASDIATHGGTVVDQVVRTMGGIEQS 436 Query: 418 SRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEI 477 S +I DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAAKEI Sbjct: 437 SHRIADIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAKEI 496 Query: 478 KGLIDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAV 537 K LIDDSV +V+ GS+LV AG+TM +VV SV+RVT IV EIS ASQEQS+GI E+G AV Sbjct: 497 KALIDDSVGQVDAGSRLVQDAGATMGKVVESVQRVTAIVTEISNASQEQSTGIAEIGTAV 556 Query: 538 NQMDEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLD 578 +QMD++TQQNAALVE+A AAA+SLQ+QAA LA VVAGF+LD Sbjct: 557 SQMDQSTQQNAALVEEATAAAQSLQQQAAQLADVVAGFRLD 597 >ref|YP_004232972.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44405.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Acidovorax avenae subsp. avenae ATCC 19860] Length = 615 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 341/597 (57%), Positives = 437/597 (73%), Gaps = 6/597 (1%) Query: 4 AMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVL 63 ++++L+ A VR +TL I +Q Q T HA I+ W + K+ +T +++ A Q D + Sbjct: 20 SLVVLAFATFLVVRGNTLAGIDAQLAQRTRLHADEITSWVKEKQRITSSIRIAATQPDPI 79 Query: 64 PIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDA 123 P + AA++AG+ DDAY+ + DKR+ LHP+P GYD TAR WYKQA++AG PV+T Y+ A Sbjct: 80 PFLQAAKQAGAMDDAYLVHADKRIAFLHPVPDGYDGTARGWYKQAMQAGGPVVTPAYIGA 139 Query: 124 TTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHP 183 ++GKL++TFAEP G L V+ +D+ L+ V R V I+PT SFA +V G ++ Sbjct: 140 SSGKLLITFAEPWGPAGQLSGVVAADMLLETVGRMVTAIQPTAKSFAMLVDDQGRLLAQA 199 Query: 184 NKELALKPVSSLDQTLSAQSLAGM-KQGGSATIGG--IRYLLFTQPIANTDWSLVVALDY 240 + +LALKPVS+L + L + GG A + +L+ + T W L +A+D Sbjct: 200 DPQLALKPVSALASGIDFALLQRLATDGGHADVAAKDADQMLYAAKVEGTPWILAIAIDR 259 Query: 241 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR 300 EAT + L+ ++ + VL ++A+ LL+Y ++R LRRL VVR+A+E+IASG+GDLTRR Sbjct: 260 AEATRTVRELLNVAIAITVLCVLAAVGLLTYAVSRQLRRLAVVRDALEDIASGEGDLTRR 319 Query: 301 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG 360 LDT G DEL QI+RAFNHF DKI+ L+ IR ++ESV++++SEIASGN DLS RTEQQA Sbjct: 320 LDTHGSDELTQIARAFNHFVDKIAAVLVRIRASAESVRLATSEIASGNQDLSGRTEQQAS 379 Query: 361 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK 420 SLEETA+AME+LT+TV+QNA+NARQA LA +AS +A HGG VVGQVV TM I+ SSRK Sbjct: 380 SLEETAAAMEQLTATVQQNAENARQAKHLAANASQIAAHGGTVVGQVVQTMGGIDASSRK 439 Query: 421 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL 480 IVDII VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+EIK L Sbjct: 440 IVDIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKAL 499 Query: 481 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM 540 IDDSV +V GS+LV AGSTM+EVV SV+RVT IV EIS ASQEQS+GI E+G AV+QM Sbjct: 500 IDDSVAQVNAGSRLVQDAGSTMQEVVESVQRVTAIVTEISNASQEQSTGIAEIGGAVSQM 559 Query: 541 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESG-AAHPMSPPPAPAGAP 596 D++TQQNAALVEQA AAA+SLQ+QA LA VAGFKLD G +AH SP GAP Sbjct: 560 DQSTQQNAALVEQATAAAQSLQQQAHQLADAVAGFKLDAHGSSAH--SPRHPALGAP 614 >ref|YP_003774401.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62493.1| methyl-accepting chemotaxis transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 625 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 338/588 (57%), Positives = 421/588 (71%), Gaps = 6/588 (1%) Query: 1 VALAMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQS 60 V LAM+ + N T RS T+ + +Q QL +S AA I+EW SK++V ++K+A + Sbjct: 37 VVLAMLAIVLTNFLTARSRTMSTLDTQMTQLAQSQAAAIAEWSDSKKLVVTSIKEAADAA 96 Query: 61 DVLPIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAG--YDPTARPWYKQAVEAGKPVLTA 118 D LP V AAQ AG FD AY+GY DK + YDPT RPWY+QA + +PVLTA Sbjct: 97 DPLPFVKAAQTAGGFDLAYLGYADKHAVFSQQRSRAPDYDPTKRPWYQQAAKTSEPVLTA 156 Query: 119 PYVDATTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGV 178 PY A+TGKL+VTFA+ V + AV +DV LD VV V IKPTP+S+AF+ G Sbjct: 157 PYTSASTGKLLVTFAQSVSKDGQVAAVAAADVLLDTVVADVVAIKPTPNSYAFLADLSGK 216 Query: 179 IITHPNKELALKPVSSLDQTLSAQSL-AGMKQG--GSATIGGIRYLLFTQPIANTDWSLV 235 II HPN +L LKP++ LD ++ Q+L M+ G + G R +LF + TDW LV Sbjct: 217 IIAHPNDKLRLKPLADLDAAITPQTLDEAMRTGVHQDVALDGRRQMLFVARVGGTDWLLV 276 Query: 236 VALDYREATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDG 295 VALD +A ++ A++ S V+AVL V +A++L I+RLL RL VV+ A+EEIA GDG Sbjct: 277 VALDRADALASLSAMLVSSGVMAVLVTVLAALVLGALISRLLGRLTVVQGALEEIADGDG 336 Query: 296 DLTRRLDTSGK-DELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSAR 354 DLTRRLDT G+ DEL +I AFN F DKI ++DIR AS ++ +S +IASGNMDLS R Sbjct: 337 DLTRRLDTHGRSDELGRIGAAFNRFVDKIEHVMIDIRDASHTIHAASRDIASGNMDLSQR 396 Query: 355 TEQQAGSLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSI 414 TE QA SLE+TA+AME+LTS+V+ NADNA QANQL+ SAS +A GG +V QVV TM+ I Sbjct: 397 TESQASSLEQTAAAMEQLTSSVRHNADNAMQANQLSQSASQIATQGGTMVEQVVQTMNGI 456 Query: 415 NESSRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAA 474 N SS+KIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAA Sbjct: 457 NASSQKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAA 516 Query: 475 KEIKGLIDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVG 534 KEIK LI DSV +V+ G VAQAG+T+ VV SV++V+D+V EI+AAS+EQS GI + Sbjct: 517 KEIKVLITDSVGQVQAGEDTVAQAGATIRSVVDSVQKVSDVVAEITAASREQSQGINQAN 576 Query: 535 NAVNQMDEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESGA 582 +AV MD+ TQQNAALVEQAAA A+SLQEQA LA +VA F+L +S A Sbjct: 577 DAVAHMDQTTQQNAALVEQAAAGAQSLQEQAERLAGIVALFRLRDSRA 624 >ref|YP_004488695.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia sp. Cs1-4] gb|AEF90340.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia sp. Cs1-4] Length = 606 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 316/586 (53%), Positives = 431/586 (73%), Gaps = 3/586 (0%) Query: 4 AMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVL 63 A+ LS A +T RS TL I QLT +HA+ +++W + K+ +TG++K+A+ Q D + Sbjct: 20 ALFALSMATFWTARSSTLSDIDENIGQLTRAHASTLTDWVQDKQRITGSLKKAVDQPDPI 79 Query: 64 PIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDA 123 P + A Q+AG FDDAY + DKR + HPMP YD T R W+KQAV G+P +T YVDA Sbjct: 80 PFLLAGQQAGGFDDAYFVHADKRAVFTHPMPENYDGTQRDWFKQAVREGRPGVTPAYVDA 139 Query: 124 TTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHP 183 +TG+L ++F +PVG + AV+G+DV+L + R VA I+P SFAF++ +G ++ + Sbjct: 140 STGELTISFVDPVGSSGAITAVVGTDVRLAAMSRKVAAIRPQEKSFAFLIDGEGRLLAYA 199 Query: 184 NKELALKPVSSLDQTLSAQSLAGM-KQGGSA--TIGGIRYLLFTQPIANTDWSLVVALDY 240 ELALKP S++ L A + + +QGG A + G +L+ + T W+L V +D Sbjct: 200 KPELALKPASAIAPELDAALIKRLAEQGGRADLVLDGEPQMLYAAKVEGTPWTLAVVIDR 259 Query: 241 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR 300 +AT ++ AL+ ++ ++ VL+++ +A+LL+ + R+L RL V R+A+++IASG+GDLTRR Sbjct: 260 AQATDSVRALLQVAALITVLSVLGAAVLLTVALRRMLNRLAVARDALQDIASGEGDLTRR 319 Query: 301 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG 360 L ++G+DELAQI ++FN F DKI+ LL IR +SESV+++S+EIA GN DLS+RTEQQA Sbjct: 320 LTSAGRDELAQIGQSFNQFVDKIATVLLRIRESSESVRMASAEIAGGNQDLSSRTEQQAS 379 Query: 361 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK 420 SLE+TA+AME++T+TV+QNA NARQA++LA SAS +A GG+ VGQVV TM I S+RK Sbjct: 380 SLEQTAAAMEQITATVQQNAANARQASELATSASQIATQGGEAVGQVVQTMGGIEASARK 439 Query: 421 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL 480 I II VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+EIK L Sbjct: 440 IESIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKAL 499 Query: 481 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM 540 IDDSV +++TGS+LV AG+T+++ V VR+++ +V EIS ASQEQS GI EVG+A+ QM Sbjct: 500 IDDSVGQIDTGSRLVRNAGTTIDQAVDGVRKLSTLVAEISNASQEQSRGIAEVGSAIGQM 559 Query: 541 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESGAAHPM 586 D+ TQQNAALVE+ AAA+SLQ+QA LA VAGFKLDE A + Sbjct: 560 DQVTQQNAALVEEVTAAAQSLQQQAVQLAQAVAGFKLDEGNGARRL 605 >emb|CBA29166.1| Methyl-accepting chemotaxis citrate transducer [Curvibacter putative symbiont of Hydra magnipapillata] Length = 703 Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust. Identities = 322/574 (56%), Positives = 407/574 (70%), Gaps = 5/574 (0%) Query: 9 SAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVLPIVAA 68 S N++T RS LE++ +QT+ L SHA ++EW S+ V A A+ ++D L + Sbjct: 29 STTNVYTARSHALESLDNQTRALAHSHATGVAEWIASRHQVVKAFGFAVNEADPLKFLEE 88 Query: 69 AQEAGSFDDAYIGYPDKR--MLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDATTG 126 A+ AG D AYIGY DKR +P YDPTARPWY+ A + P LT PYVDA + Sbjct: 89 AKVAGDVDSAYIGYADKRTAFSEKQNLPPDYDPTARPWYQLAAASQGPALTPPYVDAGSK 148 Query: 127 KLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHPNKE 186 KLV+TF+ + + ++AV DV +D VVR VA I+PTP ++ FIV K G I+ H + Sbjct: 149 KLVITFSAAIREGGAVKAVTAVDVFMDGVVRNVASIRPTPGTYGFIVDKAGKIMVHEDMA 208 Query: 187 LALKPVSSLDQTLSAQSLAGMKQGGSA---TIGGIRYLLFTQPIANTDWSLVVALDYREA 243 L LKPV+ + L L + + + I G L + PIA TDW LV+AL +EA Sbjct: 209 LVLKPVTDIAPDLGGNGLEALSKAEAVRDIQISGESRLAYATPIAGTDWFLVIALKRQEA 268 Query: 244 THAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRRLDT 303 I A++ S V ++ V + +L+ +T++L RL V+++AM++I SG GDLTRR++T Sbjct: 269 MGGITAMVWSSAVGSLAIAVVAVLLIGAVLTKVLARLVVLKDAMQDIGSGQGDLTRRIET 328 Query: 304 SGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAGSLE 363 SG DELA I+ FN F +K L +R ++++V +S+EIA GN DLSARTEQQA +LE Sbjct: 329 SGNDELAAIATGFNQFVEKTQGVLKQVRSSADAVATASAEIAQGNNDLSARTEQQASALE 388 Query: 364 ETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRKIVD 423 ETA++MEEL STVKQNAD+ARQANQLA++AS VA+ GG+VVGQVV TM INESSRKI D Sbjct: 389 ETAASMEELGSTVKQNADSARQANQLAMNASTVAIQGGEVVGQVVETMKGINESSRKIAD 448 Query: 424 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGLIDD 483 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK LI+ Sbjct: 449 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSAEAAKEIKTLINA 508 Query: 484 SVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQMDEA 543 SV++VE GS LV +AG TM EVVSS+RRVTDI+GEISAAS EQS+G+++VG AV QMD+A Sbjct: 509 SVERVEQGSSLVDKAGETMTEVVSSIRRVTDIMGEISAASSEQSAGVSQVGEAVTQMDQA 568 Query: 544 TQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKL 577 TQQNAALVE+ AAAA SL+ QA L VVA FKL Sbjct: 569 TQQNAALVEEMAAAASSLKSQANDLVQVVAVFKL 602 >ref|YP_001564498.1| Cache sensor-containing methyl-accepting chemotaxis sensory transducer [Delftia acidovorans SPH-1] gb|ABX36113.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Delftia acidovorans SPH-1] Length = 606 Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust. Identities = 316/586 (53%), Positives = 431/586 (73%), Gaps = 3/586 (0%) Query: 4 AMIILSAANIFTVRSDTLEAISSQTQQLTESHAANISEWGRSKRVVTGAMKQALKQSDVL 63 A+ LS A +T RS TL I QLT +HA+ +++W + K+ +TG++K+A+ Q D + Sbjct: 20 ALFALSMATFWTARSSTLSDIDENIGQLTRAHASTLTDWVQDKQRITGSLKKAVDQPDPV 79 Query: 64 PIVAAAQEAGSFDDAYIGYPDKRMLALHPMPAGYDPTARPWYKQAVEAGKPVLTAPYVDA 123 P + A Q+AG FDDAY + DKR + HPMP YD T R W+KQAV G+P +T YVDA Sbjct: 80 PFLLAGQQAGGFDDAYFVHADKRAVFTHPMPENYDGTQRDWFKQAVREGRPGVTPAYVDA 139 Query: 124 TTGKLVVTFAEPVGDKSNLQAVLGSDVQLDNVVRTVAGIKPTPSSFAFIVGKDGVIITHP 183 +TG+L ++F +PVG + AV+G+DV+L + R VA I+P SFAF++ +G ++ + Sbjct: 140 STGELTISFVDPVGSSGAITAVVGTDVRLAAMSRKVAAIRPQEKSFAFLIDGEGRLLAYA 199 Query: 184 NKELALKPVSSLDQTLSAQSLAGM-KQGGSA--TIGGIRYLLFTQPIANTDWSLVVALDY 240 ELALKP S++ L A + + +QGG A + G +L+ + T W+L V +D Sbjct: 200 KPELALKPASAIAPELDAALIKRLAEQGGRADLVLDGEPQMLYAAKVEGTPWTLAVVIDR 259 Query: 241 REATHAIGALMTLSTVLAVLAIVASAILLSYTITRLLRRLGVVRNAMEEIASGDGDLTRR 300 +AT ++ AL+ ++ ++ VL+++ +A+LL+ + R+L RL V R+A+++IASG+GDLTRR Sbjct: 260 AQATDSVRALLQVAALITVLSVLGAAVLLTVALRRMLNRLAVARDALQDIASGEGDLTRR 319 Query: 301 LDTSGKDELAQISRAFNHFADKISRTLLDIRRASESVKVSSSEIASGNMDLSARTEQQAG 360 L ++G+DELAQI ++FN F DKI+ LL IR +SESV+++S+EIA GN DLS+RTEQQA Sbjct: 320 LTSAGRDELAQIGQSFNQFVDKIATVLLRIRESSESVRMASAEIAGGNQDLSSRTEQQAS 379 Query: 361 SLEETASAMEELTSTVKQNADNARQANQLAVSASDVAVHGGQVVGQVVATMSSINESSRK 420 SLE+TA+AME++T+TV+QNA NARQA++LA SAS +A GG+ VGQVV TM I S+RK Sbjct: 380 SLEQTAAAMEQITATVQQNAANARQASELATSASQIATQGGEAVGQVVQTMGGIEASARK 439 Query: 421 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAKEIKGL 480 I II VID IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+EIK L Sbjct: 440 IESIIGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSATAAREIKAL 499 Query: 481 IDDSVQKVETGSQLVAQAGSTMEEVVSSVRRVTDIVGEISAASQEQSSGITEVGNAVNQM 540 IDDSV +++TGS+LV AG+T+++ V VR+++ +V EIS ASQEQS GI EVG+A+ QM Sbjct: 500 IDDSVGQIDTGSRLVRNAGTTIDQAVDGVRKLSTLVAEISNASQEQSRGIAEVGSAIGQM 559 Query: 541 DEATQQNAALVEQAAAAAKSLQEQAAHLAAVVAGFKLDESGAAHPM 586 D+ TQQNAALVE+ AAA+SLQ+QA LA VAGFKLDE A + Sbjct: 560 DQVTQQNAALVEEVTAAAQSLQQQAVQLAQAVAGFKLDEGNGACRL 605