BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0105.p (266 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum serop... 534 e-150 ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas ... 357 1e-96 ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp... 341 8e-92 ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimon... 335 5e-90 ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobactera... 334 8e-90 ref|ZP_04579082.1| uracil DNA glycosylase [Oxalobacter formigene... 294 1e-77 ref|ZP_04576352.1| uracil DNA glycosylase [Oxalobacter formigene... 278 7e-73 ref|YP_001359510.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37... 172 6e-41 ref|YP_095727.1| uracil DNA glycosylase [Legionella pneumophila ... 167 1e-39 ref|YP_123983.1| hypothetical protein lpp1665 [Legionella pneumo... 166 3e-39 >ref|YP_003776549.1| uracil DNA glycosylase [Herbaspirillum seropedicae SmR1] gb|ADJ64641.1| uracil DNA glycosylase protein [Herbaspirillum seropedicae SmR1] Length = 266 Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust. Identities = 265/266 (99%), Positives = 265/266 (99%) Query: 1 MPAPSASLHAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAA 60 MPAPSASL AALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAA Sbjct: 1 MPAPSASLPAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAA 60 Query: 61 FQQPMDRVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKML 120 FQQPMDRVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKML Sbjct: 61 FQQPMDRVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKML 120 Query: 121 LVADGRVQAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHV 180 LVADGRVQAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHV Sbjct: 121 LVADGRVQAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHV 180 Query: 181 APVKDAKAWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEH 240 APVKDAKAWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEH Sbjct: 181 APVKDAKAWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEH 240 Query: 241 PYNLSFIEHSGMQALFGAMHLLDKRH 266 PYNLSFIEHSGMQALFGAMHLLDKRH Sbjct: 241 PYNLSFIEHSGMQALFGAMHLLDKRH 266 >ref|YP_004753782.1| putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] gb|AEK62959.1| conserved hypothetical protein; putative Uracil DNA glycosylase [Collimonas fungivorans Ter331] Length = 262 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 176/257 (68%), Positives = 206/257 (80%) Query: 8 LHAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDR 67 L A++ + H SW A L GL+A+AQA+P YL LA YLPTEGR+FAAF QP++ Sbjct: 5 LPASIRSALTGVHASWLAILEHGLRAVAQANPAYLKDLAAADYLPTEGRMFAAFTQPLEA 64 Query: 68 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRV 127 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADG++ Sbjct: 65 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGQL 124 Query: 128 QAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAK 187 T+GDA++DVA QAQ D + IQ LADLQDN+ +GFLLLNASLVFR V PVKDAK Sbjct: 125 ALENTTGDAMSDVALQAQKDGSQAIQLLADLQDNMVKRGFLLLNASLVFRPDVPPVKDAK 184 Query: 188 AWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFI 247 AW+PF + VL+ LA+ +G+ LPTLVLWGKIAEQL++ P+ FP+AVAEHPYNLSFI Sbjct: 185 AWQPFMQAVLQGLADAADKRGEDLPTLVLWGKIAEQLNAYPVTARFPKAVAEHPYNLSFI 244 Query: 248 EHSGMQALFGAMHLLDK 264 ++GMQALFG M LL + Sbjct: 245 GNAGMQALFGPMQLLRR 261 >ref|YP_001352939.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] gb|ABR90553.1| uracil DNA glycosylase [Janthinobacterium sp. Marseille] Length = 261 Score = 341 bits (874), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 172/250 (68%), Positives = 194/250 (77%) Query: 15 LIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDRVRYVLVG 74 ++ A SW L AGL A+ +A P YL LATD +LP GRLFAAF QP+ VRYVLVG Sbjct: 12 MLDAADASWCPVLLAGLNAVQKASPDYLPTLATDDFLPNAGRLFAAFSQPLAAVRYVLVG 71 Query: 75 EGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQTSG 134 EGPYPR SATGVCFMDGAV SLWS+KGLSKQVNRATSLRNFMKMLLVADG++ QT+G Sbjct: 72 EGPYPRPDSATGVCFMDGAVSSLWSDKGLSKQVNRATSLRNFMKMLLVADGQLSIEQTTG 131 Query: 135 DALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKPFFE 194 DALA V+ +AQA IQTL +LQD LT GFLLLNASLVFR HVAPVKDAKAW PF + Sbjct: 132 DALAGVSQKAQAAPDSVIQTLPELQDKLTEHGFLLLNASLVFRAHVAPVKDAKAWLPFLQ 191 Query: 195 TVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEHSGMQA 254 TVL ALA+H G+T PTLVLWGKIA QL++LP FP+ V+EHPYNLSFI ++ MQ Sbjct: 192 TVLAALADHAQQAGQTPPTLVLWGKIAVQLEALPESGRFPKKVSEHPYNLSFIGNAVMQE 251 Query: 255 LFGAMHLLDK 264 LFGAMHLL K Sbjct: 252 LFGAMHLLKK 261 >ref|YP_001100498.1| putative Uracil DNA glycosylase [Herminiimonas arsenicoxydans] emb|CAL62376.1| Putative uracil DNA glycosylase [Herminiimonas arsenicoxydans] Length = 264 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 169/251 (67%), Positives = 190/251 (75%) Query: 15 LIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDRVRYVLVG 74 ++ A SW LRAGL A+ + P YL LA D YLP GRLFAAF QP+D V YVLVG Sbjct: 12 MLDAADASWRPILRAGLDAVHKTSPDYLPALAADEYLPNGGRLFAAFAQPLDAVDYVLVG 71 Query: 75 EGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQTSG 134 EGPYPRA SATGVCFMDGAV SLWSEKGLSKQVNRATSLRNFMKMLLVADG++ QT+G Sbjct: 72 EGPYPRAVSATGVCFMDGAVSSLWSEKGLSKQVNRATSLRNFMKMLLVADGQLAIEQTTG 131 Query: 135 DALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKPFFE 194 DALA V+ +AQA A IQTL +LQ NLT GFLLLNA+LVFR HV PVK+A+AW PF + Sbjct: 132 DALAGVSGKAQAAPASIIQTLPELQANLTRHGFLLLNAALVFRPHVPPVKEARAWLPFLQ 191 Query: 195 TVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEHSGMQA 254 TVL ALA+H GKT PTLVLWGKIA QL++ P FP+ V+EHPYNLSFI + MQ Sbjct: 192 TVLAALADHAEDAGKTPPTLVLWGKIAVQLEAFPESARFPKKVSEHPYNLSFIGNQVMQN 251 Query: 255 LFGAMHLLDKR 265 LFG M LL K Sbjct: 252 LFGDMQLLKKN 262 >ref|ZP_08273675.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32847.1| putative Uracil DNA glycosylase [Oxalobacteraceae bacterium IMCC9480] Length = 261 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 172/255 (67%), Positives = 191/255 (74%), Gaps = 5/255 (1%) Query: 8 LHAALADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDR 67 + AA+ I A PSW L AGL+A+ ADP YL LA D YLPTEGRL +AF QP + Sbjct: 2 IPAAILATIERADPSWQPILMAGLKAVNLADPAYLLALAQDDYLPTEGRLLSAFAQPFES 61 Query: 68 VRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRV 127 VRYVLVGEGPYPRAASATGVCFMDGAV LWS+KGLSK VNRATSLRNFMKMLLVADG + Sbjct: 62 VRYVLVGEGPYPRAASATGVCFMDGAVDLLWSDKGLSKPVNRATSLRNFMKMLLVADGTL 121 Query: 128 QAGQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAK 187 AGQTSG+A+ AQA A I+TLA LQ+NLT QGFLLLNA+LVFR+HV PV+DA+ Sbjct: 122 AAGQTSGEAMIVAGAQALQPGADRIRTLAQLQENLTRQGFLLLNAALVFRSHVPPVRDAR 181 Query: 188 AWKPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFI 247 AW PF TVL ALA+ A PTLVLWGKIA QLD LP + FPR AEHPYNLSFI Sbjct: 182 AWLPFLNTVLAALADQVAP-----PTLVLWGKIAAQLDDLPCINGFPRLTAEHPYNLSFI 236 Query: 248 EHSGMQALFGAMHLL 262 E+S MQ LF M LL Sbjct: 237 ENSSMQKLFAPMQLL 251 >ref|ZP_04579082.1| uracil DNA glycosylase [Oxalobacter formigenes OXCC13] gb|EEO30055.1| uracil DNA glycosylase [Oxalobacter formigenes OXCC13] Length = 261 Score = 294 bits (752), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 142/257 (55%), Positives = 185/257 (71%), Gaps = 5/257 (1%) Query: 14 DLIPTA----HPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDRVR 69 DLI A HPSW L GL A+++ P YL L D +LPT+GRLFAAF QPMD VR Sbjct: 6 DLINEALKRVHPSWQPVLAEGLTAMSRQSPDYLHELCQDEFLPTQGRLFAAFSQPMDAVR 65 Query: 70 YVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQA 129 YVL+GEGPYPR SA+G CFMD AV +WS+ GLSKQVNRATSLRNF+KMLLVADG + Sbjct: 66 YVLIGEGPYPREDSASGYCFMDAAVRDIWSDSGLSKQVNRATSLRNFVKMLLVADGMISP 125 Query: 130 GQTSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAW 189 QT D + +++A A+ + + I+TL ++Q+ + A GFLLLNA+LVFR HVA K+ KAW Sbjct: 126 DQTGSDTMKEISAIARQEASPFIRTLPEMQETMIANGFLLLNAALVFRPHVAVAKETKAW 185 Query: 190 KPFFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEH 249 +PF TVL+ALA++ + + LP L+LWGK+AE+L ++P ++ ++EHPYNLSFI + Sbjct: 186 QPFMLTVLQALAKNRENLSE-LPVLILWGKMAEKLIAMPFASSYRCVISEHPYNLSFIRN 244 Query: 250 SGMQALFGAMHLLDKRH 266 + MQALF M LL K+ Sbjct: 245 TDMQALFKPMRLLYKKR 261 >ref|ZP_04576352.1| uracil DNA glycosylase [Oxalobacter formigenes HOxBLS] gb|EEO27314.1| uracil DNA glycosylase [Oxalobacter formigenes HOxBLS] Length = 262 Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 138/254 (54%), Positives = 176/254 (69%), Gaps = 2/254 (0%) Query: 12 LADLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATDHYLPTEGRLFAAFQQPMDRVRYV 71 + + + AHP W L GL A+ + P Y LA D +LPT+GRLFAAF QP + VRYV Sbjct: 8 IENALKKAHPGWVPVLWEGLSALERQTPGYFKRLAQDDFLPTQGRLFAAFSQPFNAVRYV 67 Query: 72 LVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQ 131 LVGEGPYPRA SA+G CFMD AV LWSE GLSK VNRATSLRNF+KMLLVADG++ Sbjct: 68 LVGEGPYPRAESASGYCFMDAAVRELWSETGLSKPVNRATSLRNFIKMLLVADGKISPDN 127 Query: 132 TSGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKP 191 T D + +A QA + IQTLA++Q+ + +GFLLLNASLV+R++V ++ KAW+P Sbjct: 128 TGSDVMKAIAHQALNAGSPFIQTLAEMQETMLGKGFLLLNASLVYRSYVPAARETKAWQP 187 Query: 192 FFETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEHSG 251 F TVL ALA K P L+LWGK+AE+L +LP ++F V+EHPYNLSFI++ Sbjct: 188 FLYTVLEALARRRDRSEK--PVLILWGKMAEKLMALPFAESFDCIVSEHPYNLSFIQNRD 245 Query: 252 MQALFGAMHLLDKR 265 MQALF + LL ++ Sbjct: 246 MQALFRPLGLLYRQ 259 >ref|YP_001359510.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1] dbj|BAF73153.1| uracil-DNA glycosylase [Sulfurovum sp. NBC37-1] Length = 233 Score = 172 bits (435), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 101/246 (41%), Positives = 141/246 (57%), Gaps = 20/246 (8%) Query: 22 SWHAALRAGLQAIAQADPVYLDVLATDH-YLPTEGRLFAAFQQ-PMDRVRYVLVGEGPYP 79 SW L+ +A + + Y L D Y+P AF+ P ++V+Y+L G+ PYP Sbjct: 5 SWEKILQ---EAYGELEEAYRSFLEKDSGYIPNRENYLNAFKTLPREKVKYILFGQDPYP 61 Query: 80 RAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQTSGDALAD 139 R SA+G F+D V ++S+KGLSK+VNRATSLRNF+KM LVA G + S DA+A Sbjct: 62 RMESASGYAFIDAKVKEIFSDKGLSKEVNRATSLRNFVKMALVARGDLSLEDLSQDAIAA 121 Query: 140 VAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKPFFETVLRA 199 + D I ++ +L+ N G LLLN +LVF + + KAW+PF +++L+A Sbjct: 122 I------DKTSLISSIRELRINFEKNGVLLLNTALVFTDKKSSTRHVKAWRPFVQSLLKA 175 Query: 200 LAEHGASQGKTLPTLVLWGKIAEQL-DSLPLVQAFPRAVAEHPYNLSFIEHSGMQALFGA 258 L A Q P L+L+G A++L LPL + F EHPYN +FI + ALFG Sbjct: 176 LE---AQQ----PKLILFGTHAKELKKKLPL-ENFESIELEHPYNHTFISNPRALALFGP 227 Query: 259 MHLLDK 264 MHLLDK Sbjct: 228 MHLLDK 233 >ref|YP_095727.1| uracil DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] ref|YP_001250442.1| uracil DNA glycosylase [Legionella pneumophila str. Corby] ref|YP_003618980.1| uracil-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] gb|AAU27780.1| uracil DNA glycosylase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gb|ABQ55096.1| uracil DNA glycosylase [Legionella pneumophila str. Corby] gb|ADG25028.1| uracil-DNA glycosylase [Legionella pneumophila 2300/99 Alcoy] Length = 239 Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 99/250 (39%), Positives = 142/250 (56%), Gaps = 20/250 (8%) Query: 14 DLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATD-HYLPTEGRLFAAFQQPMDRVRYVL 72 +L+ H W L ++A+ D YL + D H+LP +LF+AF P+ + +Y+L Sbjct: 4 NLLVGCHEEWKEIL---MKALNTMDSDYLKQIQEDSHWLPGLNQLFSAFSLPLSQTQYIL 60 Query: 73 VGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQT 132 +GE PYPR SA G F D +VG LWS GLSK+VNRATSLRN++K LL+A G + G T Sbjct: 61 LGESPYPRKISANGYAFWDNSVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLH-GNT 119 Query: 133 SGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKPF 192 S +A+A + + + +QT D + +G LLLNASL++ P A+ WKPF Sbjct: 120 SQEAIAKI------NKSCLVQTAEDFFKGMMKKGILLLNASLIYSKGKVPY-HARHWKPF 172 Query: 193 FETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEHSGM 252 + + LA K L+L+GKIAE++ + L+ V+EHPYN+SFI + + Sbjct: 173 MQNLFEQLAIR-----KPDVQLILFGKIAEKIPANKLLIGL---VSEHPYNVSFITNQRV 224 Query: 253 QALFGAMHLL 262 F M LL Sbjct: 225 IEFFKPMDLL 234 >ref|YP_123983.1| hypothetical protein lpp1665 [Legionella pneumophila str. Paris] emb|CAH12817.1| hypothetical protein lpp1665 [Legionella pneumophila str. Paris] Length = 239 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 98/250 (39%), Positives = 141/250 (56%), Gaps = 20/250 (8%) Query: 14 DLIPTAHPSWHAALRAGLQAIAQADPVYLDVLATD-HYLPTEGRLFAAFQQPMDRVRYVL 72 +L+ H W L ++A+ D YL + D H+LP +LF+AF P+ + +Y+L Sbjct: 4 NLLVGCHEEWKEIL---MKALNTMDSDYLKQIQEDSHWLPGLNQLFSAFSLPLSQTQYIL 60 Query: 73 VGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVADGRVQAGQT 132 +GE PYPR SA G F D +VG LWS GLSK+VNRATSLRN++K LL+A G + G T Sbjct: 61 LGESPYPRKISANGYAFWDNSVGLLWSSTGLSKEVNRATSLRNWIKTLLIARGDLH-GNT 119 Query: 133 SGDALADVAAQAQADVAGTIQTLADLQDNLTAQGFLLLNASLVFRTHVAPVKDAKAWKPF 192 S +A+A + + + +QT D + +G LLLNASL++ P A+ WKPF Sbjct: 120 SQEAIAKI------NKSCLVQTAEDFFKGMMKKGILLLNASLIYSKGKVPY-HARHWKPF 172 Query: 193 FETVLRALAEHGASQGKTLPTLVLWGKIAEQLDSLPLVQAFPRAVAEHPYNLSFIEHSGM 252 + + L K L+L+GKIAE++ + L+ V+EHPYN+SFI + + Sbjct: 173 MQNLFEQLVIR-----KPDVQLILFGKIAEKIPANKLLIGL---VSEHPYNVSFITNQRV 224 Query: 253 QALFGAMHLL 262 F M LL Sbjct: 225 IEFFKPMDLL 234