BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0104.p (693 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776548.1| excinuclease ABC subunit B [Herbaspirillum s... 1414 0.0 ref|YP_004753783.1| excinuclease ABC subunit B [Collimonas fungi... 1253 0.0 ref|YP_001352938.1| excinuclease ABC subunit B [Janthinobacteriu... 1251 0.0 ref|YP_001100499.1| excinuclease ABC subunit B [Herminiimonas ar... 1248 0.0 ref|ZP_08273674.1| Excinuclease ABC subunit B [Oxalobacteraceae ... 1230 0.0 ref|YP_295274.1| excinuclease ABC subunit B [Ralstonia eutropha ... 1172 0.0 ref|YP_002005164.1| excinuclease ABC subunit b [Cupriavidus taiw... 1167 0.0 ref|ZP_04576351.1| excinuclease ABC subunit B [Oxalobacter formi... 1166 0.0 ref|YP_004684931.1| UvrABC system protein UvrB [Cupriavidus neca... 1166 0.0 ref|YP_725661.1| excinuclease ABC subunit B [Ralstonia eutropha ... 1165 0.0 >ref|YP_003776548.1| excinuclease ABC subunit B [Herbaspirillum seropedicae SmR1] gb|ADJ64640.1| excinuclease ABC subunit B (SOS response excision nuclease DNA repair ATP-binding) protein [Herbaspirillum seropedicae SmR1] Length = 693 Score = 1414 bits (3660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 692/693 (99%), Positives = 692/693 (99%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT Sbjct: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYTMAN IARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTMANTIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI Sbjct: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI Sbjct: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH Sbjct: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN Sbjct: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL Sbjct: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA Sbjct: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAVA 693 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAVA Sbjct: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAVA 693 >ref|YP_004753783.1| excinuclease ABC subunit B [Collimonas fungivorans Ter331] gb|AEK62960.1| Excinuclease ABC subunit B [Collimonas fungivorans Ter331] Length = 693 Score = 1253 bits (3243), Expect = 0.0, Method: Compositional matrix adjust. Identities = 601/692 (86%), Positives = 647/692 (93%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 MA+++ + + +DESK VTFP+SP+KL+Q F PAGDQP AIDKL EG+ DGLFYQTLLGVT Sbjct: 1 MADISQVQSTVDESKIVTFPNSPYKLFQPFQPAGDQPEAIDKLAEGLQDGLFYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYTMAN+IAR+GRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RAKDKVSQRDVIARLIQMQYTRNE+DFGRGTFRVRGDTIDVFPAEHAELA+RIE FDDEI Sbjct: 181 RAKDKVSQRDVIARLIQMQYTRNEIDFGRGTFRVRGDTIDVFPAEHAELALRIEMFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 DSLQLFDPLTGRVRQKIPRFT+YPGSHYVTPR+TVLRAIETIK+EL +RLEFFRKENKLI Sbjct: 241 DSLQLFDPLTGRVRQKIPRFTVYPGSHYVTPRATVLRAIETIKDELRDRLEFFRKENKLI 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQR+EQRTRFD+EMM EIGFTKGIENYSRHLSGA PG+PPPTLVDYLP+DA+MFLDESH Sbjct: 301 EEQRIEQRTRFDLEMMQEIGFTKGIENYSRHLSGALPGEPPPTLVDYLPQDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLN MYNGDR+RK NLVDYGFRLPSALDNRPL+FDEFE KMRQTIFVSATPADYEN Sbjct: 361 VLIGQLNAMYNGDRSRKTNLVDYGFRLPSALDNRPLRFDEFEGKMRQTIFVSATPADYEN 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 HADQVVEQVVRPTGL+DP I VRPA +QVDDLM E N RI K+ERVLVTTLTKRMAEQL Sbjct: 421 QHADQVVEQVVRPTGLIDPAIEVRPALSQVDDLMNEANARIKKNERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLSDNGIKVRYLHSDI+TVERVEIIRDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSDNGIKVRYLHSDIETVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNLNG AILY D +TDSM +AI ETERRR KQ+AFNAAN Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLNGTAILYADRMTDSMRRAIDETERRRNKQIAFNAAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GI P GI K+I+ELIDGV++P +AR L A+++ YE+MSEKQ+SKEIKRLEKQM +HA Sbjct: 601 GITPVGISKQIKELIDGVYSPQEAREVLHAAQDQAKYEAMSEKQVSKEIKRLEKQMVDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAV 692 KNLEFEKAA RDQLH+LKQQLFGAPG+D V Sbjct: 661 KNLEFEKAAQVRDQLHVLKQQLFGAPGADNIV 692 >ref|YP_001352938.1| excinuclease ABC subunit B [Janthinobacterium sp. Marseille] gb|ABR88262.1| excinuclease ABC subunit B [Janthinobacterium sp. Marseille] Length = 696 Score = 1251 bits (3237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/689 (86%), Positives = 648/689 (94%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 MA+L+ ++ +DE+K VTFP+SPF+L+Q FPPAGDQP AI KLVEG+ DGLFYQTLLGVT Sbjct: 1 MADLSQVSNSVDEAKVVTFPNSPFRLHQPFPPAGDQPTAIAKLVEGIEDGLFYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYT+AN+IAR+GRPAIVFAPNKTLAAQLYSEFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTVANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPENAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVI+ATVSAIYGIGNP+EYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIIATVSAIYGIGNPSEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RAKDKVSQRDVIARLI MQYTRNE+DFGRGTFRVRGDTID+FPAEHAELA+R+E FDDEI Sbjct: 181 RAKDKVSQRDVIARLIAMQYTRNEIDFGRGTFRVRGDTIDIFPAEHAELAIRLEMFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SLQLFDPLTGRV+QKIPRFT+YPGSHYVTPR+TVLRAIETIK+EL ERLEFFRKE+KL+ Sbjct: 241 ESLQLFDPLTGRVKQKIPRFTVYPGSHYVTPRATVLRAIETIKDELRERLEFFRKESKLV 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQRLEQRTRFD+EMM EIGFTKGIENYSRHLSGAK GDPPPTLVDYLP+DA+MF+DESH Sbjct: 301 EEQRLEQRTRFDLEMMQEIGFTKGIENYSRHLSGAKAGDPPPTLVDYLPQDALMFMDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VL+GQLNGMYNGDRARK NLVDYGFRLPSALDNRPL+FDEFE KMRQ +FVSATPADYEN Sbjct: 361 VLMGQLNGMYNGDRARKTNLVDYGFRLPSALDNRPLRFDEFEGKMRQMVFVSATPADYEN 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 THADQVVEQVVRPTGLVDP+I+VRPA+TQVDDLM EI DR+ K+ERVLVTTLTKRMAEQL Sbjct: 421 THADQVVEQVVRPTGLVDPLISVRPASTQVDDLMSEITDRVKKNERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLD+PEVSLVAILD Sbjct: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDLPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNL GMAILYGD VTDSM +AI ETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLTGMAILYGDKVTDSMRRAIDETERRRAKQIAFNTAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 I P GIKK IRELIDGV++P +AR EL VA+E YE+MSEKQ+SKEIKRLEK M HA Sbjct: 601 NITPIGIKKHIRELIDGVYSPQEARLELQVAQEHAKYEAMSEKQVSKEIKRLEKLMLGHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSD 689 KNLEFEKAA RDQL +LK+QLFGAPG+D Sbjct: 661 KNLEFEKAAQVRDQLRILKEQLFGAPGAD 689 >ref|YP_001100499.1| excinuclease ABC subunit B [Herminiimonas arsenicoxydans] emb|CAL62377.1| UvrABC system protein B (Protein uvrB) (Excinuclease ABC subunit B) [Herminiimonas arsenicoxydans] Length = 694 Score = 1248 bits (3228), Expect = 0.0, Method: Compositional matrix adjust. Identities = 599/692 (86%), Positives = 642/692 (92%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M +L+ + +DESK VTFPDSPF+LYQ FPPAGDQP AI KLVEG+ DGLFYQTLLGVT Sbjct: 1 MTDLSQVADSIDESKIVTFPDSPFRLYQPFPPAGDQPTAIAKLVEGIEDGLFYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYT+AN+IAR+GRPAIVFAPNKTLAAQLYSEFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTVANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPQNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVI+ATVSAIYGIGNP+EYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIIATVSAIYGIGNPSEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RAKDKVSQRDVIARLI MQYTRNEVDFGRGTFRVRGDTID+FPAEHAELA+R+E FDDEI Sbjct: 181 RAKDKVSQRDVIARLIAMQYTRNEVDFGRGTFRVRGDTIDIFPAEHAELAIRLEMFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SLQLFDPLTGRV+QKIPRFT+YPGSHYVTPR+TVLRAI+TIK+EL ERLEFFRKENKLI Sbjct: 241 ESLQLFDPLTGRVKQKIPRFTVYPGSHYVTPRATVLRAIDTIKDELRERLEFFRKENKLI 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQRLEQRTRFD+EMM EIGFTKGIENYSRHLSGAK GDPPPTLVDYLP+DA+MF+DESH Sbjct: 301 EEQRLEQRTRFDLEMMQEIGFTKGIENYSRHLSGAKAGDPPPTLVDYLPQDALMFMDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VL+GQLNGMYNGDRARK NLVDYGFRLPSALDNRPL+FDEFE KMRQ +FVSATPADYEN Sbjct: 361 VLMGQLNGMYNGDRARKTNLVDYGFRLPSALDNRPLRFDEFEGKMRQMVFVSATPADYEN 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 HADQVVEQVVRPTGLVDP+I+VRPA+TQVDDLM EI DR+ K ERVLVTTLTKRM+EQL Sbjct: 421 AHADQVVEQVVRPTGLVDPLISVRPASTQVDDLMTEITDRVKKHERVLVTTLTKRMSEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLD+PEVSLVAILD Sbjct: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDLPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGD VTDSM +AI ETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDKVTDSMRRAIDETERRRAKQMAFNTAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 I P GIKK IRELIDGV++ AR E A+E YE+MSEKQ+SKEIKRLEKQM HA Sbjct: 601 NITPVGIKKHIRELIDGVYSQQDAREEFNAAQEHAKYEAMSEKQVSKEIKRLEKQMLGHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAV 692 KNLEFEKAA RDQL +LK+QLFGAPG D V Sbjct: 661 KNLEFEKAAQVRDQLRILKEQLFGAPGEDHIV 692 >ref|ZP_08273674.1| Excinuclease ABC subunit B [Oxalobacteraceae bacterium IMCC9480] gb|EGF32846.1| Excinuclease ABC subunit B [Oxalobacteraceae bacterium IMCC9480] Length = 697 Score = 1230 bits (3183), Expect = 0.0, Method: Compositional matrix adjust. Identities = 591/693 (85%), Positives = 642/693 (92%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 MAELT + + +DESK +TFPDSPF+L Q F PAGDQP AI KLVEG+ DGL YQTLLGVT Sbjct: 1 MAELTQVTSSIDESKIITFPDSPFQLLQPFEPAGDQPTAIAKLVEGIEDGLSYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYTMAN+IAR+GRPAI+FAPNKTLAAQLYSEFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTMANVIARMGRPAIIFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDV+IVATVSAIYGIGNPNEYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVIIVATVSAIYGIGNPNEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RAKDKVSQRDVIARLIQMQYTRNE+DFGRGTFRVRGDTID+FPAEHAELAVR+E FDDEI Sbjct: 181 RAKDKVSQRDVIARLIQMQYTRNEIDFGRGTFRVRGDTIDIFPAEHAELAVRLEMFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +S+QLFDPLTGRVRQKIPRFT+YPGSHYVTPR+TVLRAIETIKEEL +RLEFFRKENKLI Sbjct: 241 ESIQLFDPLTGRVRQKIPRFTVYPGSHYVTPRATVLRAIETIKEELRDRLEFFRKENKLI 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQR+EQRTRFD+EMM EIGFTKGIENYSRHLSGAK G+PPPTL+DYLP DA+MFLDESH Sbjct: 301 EEQRIEQRTRFDLEMMQEIGFTKGIENYSRHLSGAKAGEPPPTLIDYLPPDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VL+GQL+GMYNGDR+RK NLVDYGFRLPSALDNRPL+FDEFE KMRQT+FVSATPA+YE Sbjct: 361 VLLGQLSGMYNGDRSRKTNLVDYGFRLPSALDNRPLRFDEFEGKMRQTVFVSATPAEYEK 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 THA QVVEQVVRPTGLVDP I VRPA+TQVDDLM EI R+A++ERVLVTTLTKRM+EQL Sbjct: 421 THAGQVVEQVVRPTGLVDPAIEVRPASTQVDDLMGEIQLRVAQNERVLVTTLTKRMSEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLSDNG+KVRYLHSDIDTVERVEI+RDLRLGTFDV+VGINLLREGLD+PEVSLVAILD Sbjct: 481 TEFLSDNGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINLLREGLDLPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNLNG AILYGD VTDSM +AI ETERRR KQ+ FN AN Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLNGKAILYGDKVTDSMRRAIDETERRRNKQVEFNLAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 I P GIKK+I++LIDGV++P +AR EL VA+E YESMSEKQISKEIKRLEK M +HA Sbjct: 601 NITPIGIKKQIKDLIDGVYSPQEAREELQVAQETAKYESMSEKQISKEIKRLEKLMLDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDTAVA 693 KNLEFEKAA RDQL +LK+QLFGA GSD + Sbjct: 661 KNLEFEKAAQVRDQLRILKEQLFGAGGSDNIAS 693 >ref|YP_295274.1| excinuclease ABC subunit B [Ralstonia eutropha JMP134] sp|Q473K3.1|UVRB_RALEJ RecName: Full=UvrABC system protein B; Short=Protein uvrB; AltName: Full=Excinuclease ABC subunit B gb|AAZ60430.1| Excinuclease ABC subunit B [Ralstonia eutropha JMP134] Length = 695 Score = 1172 bits (3033), Expect = 0.0, Method: Compositional matrix adjust. Identities = 563/690 (81%), Positives = 616/690 (89%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M+ L + LDE K VTFP SPF+LYQ FPPAGDQP AI +LVEG+ DGL +QTLLGVT Sbjct: 1 MSNLAEVAPALDEDKIVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGIEDGLSFQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYTMAN+IAR+GRPAIVFAPNKTLAAQLYSEFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTMANVIARMGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLS TKSL+ERRD +IVATVSAIYGIGNPNEYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPNEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 R DK+SQRDVIARLI MQYTRNE DF RGTFRVRGDTID+FPAEHAE+AVR+E FDDE+ Sbjct: 181 RTGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SLQ FDPLTGRVRQKIPRFT+YP SHYVTPR TVLRAIE IK EL +RLEFF KEN+L+ Sbjct: 241 ESLQFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEDIKAELRDRLEFFHKENRLV 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 E QRLEQRTRFD+EM++E+GF KGIENYSRHLSGAKPG+PPPTLVDYLP DA+MFLDESH Sbjct: 301 EVQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGAKPGEPPPTLVDYLPSDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLNGMYNGDRARK LV+YGFRLPSALDNRPLKF+EFE+KMRQ +FVSATPA +E Sbjct: 361 VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFERKMRQVMFVSATPAQFEK 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 HA QVVEQVVRPTGLVDPII VRPATTQVDDL+ EIN R+ ERVLVTTLTKRMAEQL Sbjct: 421 EHAGQVVEQVVRPTGLVDPIIIVRPATTQVDDLLSEINLRVEAGERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLS+NG+KVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLR+ERSLIQTIGRAARN+NG AILY D +TDSM KAI ETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRITDSMRKAIDETERRRAKQMAFNEAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GI P G+ K I+++IDGV++ + + ELL A+E+ YE MSEKQ+SKEIKRLEK M +HA Sbjct: 601 GITPRGVIKRIKDIIDGVYDAGEVKAELLAAQERARYEDMSEKQVSKEIKRLEKLMMDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPGSDT 690 KNLEFEKAA RDQL LK QLFGA G + Sbjct: 661 KNLEFEKAAQVRDQLAKLKAQLFGASGEEA 690 >ref|YP_002005164.1| excinuclease ABC subunit b [Cupriavidus taiwanensis LMG 19424] emb|CAQ69097.1| ATP-dependent DNA excision repair enzyme, DNA damage recognition component [Cupriavidus taiwanensis LMG 19424] Length = 694 Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust. Identities = 562/687 (81%), Positives = 614/687 (89%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M L LDE KFVTFPDSPF+LYQ FPPAGDQP AI +LVEGV DGL YQTLLGVT Sbjct: 1 MTNLAEAAPALDEDKFVTFPDSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKT+TMAN+IARLGRPAIVFAPNKTLAAQLY+EFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLS TKSL+ERRD VIVATVSAIYGIGNP EYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVATVSAIYGIGNPTEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RA DK+SQRDVIARLI MQYTRNE DF RGTFRVRGDTID+FPAEHAE+AVR+E FDDE+ Sbjct: 181 RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SL FDPLTGRVRQKIPRFT+YP SHYVTPR TVLRAIE IK EL ERLEFF KEN+L+ Sbjct: 241 ESLHFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKAELRERLEFFHKENRLV 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 E QRLEQRTRFD+EM++E+GF KGIENYSRHLSGA+PGDPPPTLVDYLP DA+MFLDESH Sbjct: 301 EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGDPPPTLVDYLPPDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLNGMYNGDRARK LV+YGFRLPSALDNRPLKFDEFE+KMRQ +FV+ATPA +E Sbjct: 361 VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVTATPAQFEQ 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 HA QVVEQVVRPTGLVDPII VRPATTQVDDL+ EI+ R+ ERVLVTTLTKRMAEQL Sbjct: 421 EHAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEIHARVEAGERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFL++NG+KVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLTENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLR+ERSLIQTIGRAARN+NG AILY D +TDSM KAI ETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTDSMKKAIDETERRRAKQIAFNEAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GI P G+ K I+++IDGV+N + A+ EL A+E+ YE MSEKQ+S+EIKRLEK M +HA Sbjct: 601 GITPRGVVKRIKDIIDGVYNASDAKAELQAAQEQARYEDMSEKQVSREIKRLEKLMLDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPG 687 +NLEFE+AA RDQL LK Q+FGA G Sbjct: 661 RNLEFEQAAQVRDQLAKLKAQVFGASG 687 >ref|ZP_04576351.1| excinuclease ABC subunit B [Oxalobacter formigenes HOxBLS] gb|EEO27313.1| excinuclease ABC subunit B [Oxalobacter formigenes HOxBLS] Length = 699 Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 556/685 (81%), Positives = 622/685 (90%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M+ L+ I+++ ++ K VTFP+SPF+L+Q FPP+GDQP AID+LVEG+ DGL YQTLLGVT Sbjct: 1 MSHLSLISSKKEDGKVVTFPNSPFELHQPFPPSGDQPEAIDRLVEGIEDGLSYQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKTYTMAN+IARLGRPAIVFAPNKTLAAQLYSEFREFFP+NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTYTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDS+INEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNP+EYHQMILTL Sbjct: 121 VPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPSEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 R +DK+ QRDVI RL+QMQYTRN++DF RGTFRVRGDTIDVFPAE+A+ A+RIE FDDEI Sbjct: 181 RTRDKIPQRDVITRLVQMQYTRNDIDFSRGTFRVRGDTIDVFPAENADYALRIEMFDDEI 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SL FDPLTG+V QKIPRFT+YPGSHYVTPR TVLRAIETIKEEL ER E+FR+ K I Sbjct: 241 ESLHFFDPLTGKVLQKIPRFTVYPGSHYVTPRETVLRAIETIKEELRERKEWFRQNGKFI 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 EEQR++QRTRFD+EMM E+GFTKGIENYSRHL+G K GD PPTLVDYLP DA+MFLDESH Sbjct: 301 EEQRIDQRTRFDLEMMHELGFTKGIENYSRHLTGRKAGDAPPTLVDYLPSDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 V IGQLNGMYNGDR+RK NLVDYGFRLPSALDNRPL+FDEFE KMRQT+FVSATPA+YE Sbjct: 361 VTIGQLNGMYNGDRSRKTNLVDYGFRLPSALDNRPLRFDEFESKMRQTVFVSATPANYEL 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 H+ QVVEQVVRPTGLVDP I VRPA+TQVDDL+ EI+DR+ K ERVLVTTLTKRMAEQL Sbjct: 421 AHSGQVVEQVVRPTGLVDPAIEVRPASTQVDDLLAEIHDRVEKSERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLS+NGI+VRYLHSDIDTVERVEI+RDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSENGIRVRYLHSDIDTVERVEIVRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLRSERSLIQTIGRAARNLNG AILY D +TDSM +AI ETERRRAKQLA+N + Sbjct: 541 ADKEGFLRSERSLIQTIGRAARNLNGSAILYADTMTDSMKRAIDETERRRAKQLAYNEQH 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 I P GI KEIR+LIDGVF+P + EL VA+E+ Y+ MSEK++S+EIK+LEKQM EHA Sbjct: 601 NITPAGIMKEIRDLIDGVFHPQDSLQELHVADEQAQYDVMSEKELSREIKKLEKQMMEHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGA 685 KNLEFEKAA RDQLHLL+++ FGA Sbjct: 661 KNLEFEKAAQTRDQLHLLREKAFGA 685 >ref|YP_004684931.1| UvrABC system protein UvrB [Cupriavidus necator N-1] gb|AEI76450.1| UvrABC system protein UvrB [Cupriavidus necator N-1] Length = 694 Score = 1166 bits (3016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 560/687 (81%), Positives = 617/687 (89%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M+ L LDE KFVTFP SPF+LYQ FPPAGDQP AI +LVEGV+DGL +QTLLGVT Sbjct: 1 MSNLAEAAPALDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVDDGLSFQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKT+TMAN+IAR+GRPAIVFAPNKTLAAQLY+EFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLS TKSL+ERRD +IVATVSAIYGIGNP EYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RA DK+SQRDVIARLI MQYTRNE DF RGTFRVRGDTID+FPAEHAE+AVR+E FDDE+ Sbjct: 181 RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SL FDPLTGRVRQKIPRFT+YP SHYVTPR TVLRAIE IK EL ERLEFF KEN+L+ Sbjct: 241 ESLHFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRERLEFFHKENRLV 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 E QRLEQRTRFD+EM++E+GF KGIENYSRHLSGA+PGDPPPTLVDYLP DA+MFLDESH Sbjct: 301 EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGARPGDPPPTLVDYLPPDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLNGMYNGDRARK LV+YGFRLPSALDNRPLKFDEFE+KMRQ +FVSATPA +E Sbjct: 361 VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 +A QVVEQVVRPTGLVDPII VRPATTQVDDL+ EI+ R+ ERVLVTTLTKRMAEQL Sbjct: 421 ENAGQVVEQVVRPTGLVDPIILVRPATTQVDDLVSEIHARVEAGERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLS+NG+KVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLR+ERSLIQTIGRAARN+NG AILY D +T+SM KAIGETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTESMKKAIGETERRRAKQIAFNEAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GI P G+ K I+++IDGV++ + A+ ELL A+E+ YE MSEKQ+SKEIKRLEK M +HA Sbjct: 601 GITPRGVVKRIKDIIDGVYSVSDAKAELLAAQEQARYEDMSEKQVSKEIKRLEKLMLDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPG 687 +NLEFE+AA RDQL LK Q+FGA G Sbjct: 661 RNLEFEQAAQVRDQLAKLKAQVFGASG 687 >ref|YP_725661.1| excinuclease ABC subunit B [Ralstonia eutropha H16] emb|CAJ92293.1| Excinuclease ABC, helicase subunit (B) [Ralstonia eutropha H16] Length = 694 Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust. Identities = 561/687 (81%), Positives = 616/687 (89%) Query: 1 MAELTPINTELDESKFVTFPDSPFKLYQVFPPAGDQPAAIDKLVEGVNDGLFYQTLLGVT 60 M+ L LDE KFVTFP SPF+LYQ FPPAGDQP AI +LVEGV DGL +QTLLGVT Sbjct: 1 MSNLAEAAPALDEDKFVTFPGSPFQLYQPFPPAGDQPEAIRQLVEGVEDGLSFQTLLGVT 60 Query: 61 GSGKTYTMANMIARLGRPAIVFAPNKTLAAQLYSEFREFFPHNAVEYFVSYYDYYQPEAY 120 GSGKT+TMAN+IAR+GRPAIVFAPNKTLAAQLY+EFREFFP NAVEYFVSYYDYYQPEAY Sbjct: 61 GSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEAY 120 Query: 121 VPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL 180 VPQRDLFIEKDSSINEHIEQMRLS TKSL+ERRD +IVATVSAIYGIGNP EYHQMILTL Sbjct: 121 VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVATVSAIYGIGNPTEYHQMILTL 180 Query: 181 RAKDKVSQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIETFDDEI 240 RA DK+SQRDVIARLI MQYTRNE DF RGTFRVRGDTID+FPAEHAE+AVR+E FDDE+ Sbjct: 181 RAGDKISQRDVIARLIAMQYTRNETDFQRGTFRVRGDTIDIFPAEHAEMAVRLEMFDDEV 240 Query: 241 DSLQLFDPLTGRVRQKIPRFTIYPGSHYVTPRSTVLRAIETIKEELAERLEFFRKENKLI 300 +SLQ FDPLTGRVRQKIPRFT+YP SHYVTPR TVLRAIE IK EL ERLEFF KEN+L+ Sbjct: 241 ESLQFFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIEAIKSELRERLEFFHKENRLV 300 Query: 301 EEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKPGDPPPTLVDYLPKDAIMFLDESH 360 E QRLEQRTRFD+EM++E+GF KGIENYSRHLSGAKPG+PPPTLVDYLP DA+MFLDESH Sbjct: 301 EAQRLEQRTRFDLEMLSELGFCKGIENYSRHLSGAKPGEPPPTLVDYLPPDALMFLDESH 360 Query: 361 VLIGQLNGMYNGDRARKVNLVDYGFRLPSALDNRPLKFDEFEKKMRQTIFVSATPADYEN 420 VLIGQLNGMYNGDRARK LV+YGFRLPSALDNRPLKFDEFE+KMRQ +FVSATPA +E Sbjct: 361 VLIGQLNGMYNGDRARKTTLVEYGFRLPSALDNRPLKFDEFERKMRQVMFVSATPAQFEQ 420 Query: 421 THADQVVEQVVRPTGLVDPIIAVRPATTQVDDLMQEINDRIAKDERVLVTTLTKRMAEQL 480 +A QVVEQVVRPTGLVDPII VRPATTQVDDL+ EI+ R+ ERVLVTTLTKRMAEQL Sbjct: 421 DNAGQVVEQVVRPTGLVDPIIMVRPATTQVDDLLSEIHARVEVGERVLVTTLTKRMAEQL 480 Query: 481 TEFLSDNGIKVRYLHSDIDTVERVEIIRDLRLGTFDVVVGINLLREGLDIPEVSLVAILD 540 TEFLS+NG+KVRYLHSDIDTVERVEIIRDLRLGTFDV+VGINLLREGLDIPEVSLVAILD Sbjct: 481 TEFLSENGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD 540 Query: 541 ADKEGFLRSERSLIQTIGRAARNLNGMAILYGDVVTDSMHKAIGETERRRAKQLAFNAAN 600 ADKEGFLR+ERSLIQTIGRAARN+NG AILY D +T+SM KAIGETERRRAKQ+AFN AN Sbjct: 541 ADKEGFLRAERSLIQTIGRAARNVNGTAILYADRMTESMKKAIGETERRRAKQIAFNEAN 600 Query: 601 GIVPTGIKKEIRELIDGVFNPAQARTELLVAEEKKNYESMSEKQISKEIKRLEKQMQEHA 660 GI P G+ K I+++IDGV++ AR ELL A+E+ YE MSEKQ+SKEI+RLEK M +HA Sbjct: 601 GITPRGVVKRIKDIIDGVYSVNDARAELLAAQEQARYEDMSEKQVSKEIRRLEKLMLDHA 660 Query: 661 KNLEFEKAAAARDQLHLLKQQLFGAPG 687 +NLEFE+AA RDQL LK Q+FGA G Sbjct: 661 RNLEFEQAAQVRDQLAKLKAQVFGASG 687