BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0100.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776545.1| ATPase [Herbaspirillum seropedicae SmR1] >gi... 737 0.0 ref|YP_004714171.1| tRNA 2-selenouridine synthase [Pseudomonas s... 480 e-133 gb|AEA83825.1| tRNA 2-selenouridine synthase [Pseudomonas stutze... 479 e-133 ref|YP_004353097.1| tRNA 2-selenouridine synthase [Pseudomonas b... 478 e-133 ref|YP_349483.1| tRNA 2-selenouridine synthase [Pseudomonas fluo... 470 e-130 ref|YP_259386.1| tRNA 2-selenouridine synthase [Pseudomonas fluo... 469 e-130 ref|YP_001632501.1| tRNA 2-selenouridine synthase [Bordetella pe... 466 e-129 ref|ZP_07774585.1| tRNA 2-selenouridine synthase [Pseudomonas fl... 462 e-128 ref|YP_004380098.1| tRNA 2-selenouridine synthase [Pseudomonas m... 462 e-128 ref|YP_002798226.1| tRNA 2-selenouridine synthase [Azotobacter v... 461 e-128 >ref|YP_003776545.1| ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64637.1| ATPase protein [Herbaspirillum seropedicae SmR1] Length = 363 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/363 (99%), Positives = 362/363 (99%) Query: 1 MADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSA 60 MADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGL YKEEGQQSA Sbjct: 1 MADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLRYKEEGQQSA 60 Query: 61 IELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVA 120 IELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVA Sbjct: 61 IELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVA 120 Query: 121 GGYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGK 180 GGYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGK Sbjct: 121 GGYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGK 180 Query: 181 RASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWL 240 RASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWL Sbjct: 181 RASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWL 240 Query: 241 EDSREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQ 300 EDSREGRVERILRDYVSGLCDEYVTLDPR+GFERYRAHLLAALGKLVKRLGDQRYRQLVQ Sbjct: 241 EDSREGRVERILRDYVSGLCDEYVTLDPRHGFERYRAHLLAALGKLVKRLGDQRYRQLVQ 300 Query: 301 LMETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 LMETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ Sbjct: 301 LMETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 Query: 361 YRP 363 YRP Sbjct: 361 YRP 363 >ref|YP_004714171.1| tRNA 2-selenouridine synthase [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEJ05082.1| tRNA 2-selenouridine synthase [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 368 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 227/361 (62%), Positives = 278/361 (77%) Query: 2 ADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAI 61 D + R+LFL D PM+DARAPVEFGKGAFP VNLPLMND ER +VG YK+ G+Q+AI Sbjct: 3 GDTENYRELFLNDVPMMDARAPVEFGKGAFPGVVNLPLMNDVERQKVGTCYKQHGRQAAI 62 Query: 62 ELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAG 121 E+GHQLVSG K R+ AWADFAR HPDG LYCFRGGLRS+I QQWLK E GI YPRV G Sbjct: 63 EMGHQLVSGKTKAERLQAWADFARAHPDGYLYCFRGGLRSKIVQQWLKDEMGIDYPRVVG 122 Query: 122 GYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKR 181 GYKA+RHFL+E IEQA+ C FV+VGGMTG+GKT+VL QL N+LDLE ANHRGSSFGKR Sbjct: 123 GYKAMRHFLLETIEQAVERCEFVLVGGMTGTGKTEVLAQLGNSLDLEGLANHRGSSFGKR 182 Query: 182 ASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLE 241 A+PQPS IDFE+ LAI L+K++A G F +EDE+RL+G C++PL L Q MQ P++WLE Sbjct: 183 ATPQPSQIDFENALAIRLLKMRAAGIESFVIEDEARLVGRCSIPLPLFQGMQQFPLIWLE 242 Query: 242 DSREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQL 301 DS +GRVERIL+DYV LC E+++ GF + L +L + KRLG +RY++L L Sbjct: 243 DSLQGRVERILKDYVIDLCAEFISEQGENGFAAFAERLQQSLVNINKRLGGERYQRLALL 302 Query: 302 METALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQY 361 M+ ALA Q + G VDLHRAWI+ALL +YYDP+YA+QRE+K R+ FAG Q VV++LR Sbjct: 303 MDQALAEQARSGAVDLHRAWIEALLGEYYDPMYAYQRESKAERIEFAGDQPSVVEYLRNR 362 Query: 362 R 362 + Sbjct: 363 K 363 >gb|AEA83825.1| tRNA 2-selenouridine synthase [Pseudomonas stutzeri DSM 4166] Length = 368 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 225/361 (62%), Positives = 279/361 (77%) Query: 2 ADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAI 61 D + R+LFL D PM+DARAPVEFGKGAFP VNLPLMND ER +VG YK+ GQ++AI Sbjct: 3 GDTENYRELFLNDVPMMDARAPVEFGKGAFPGVVNLPLMNDVERQKVGTCYKQHGQKAAI 62 Query: 62 ELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAG 121 E+GHQLVSG K R+ AWADFAR HPDG LYCFRGGLRS+I QQWLK E GI YPRV G Sbjct: 63 EMGHQLVSGKTKAERLQAWADFARAHPDGYLYCFRGGLRSKIVQQWLKDEMGIDYPRVVG 122 Query: 122 GYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKR 181 GYKA+RHFL++ IEQA+ +C F++VGGMTG+GKT+VL QL N+LDLE ANHRGSSFGKR Sbjct: 123 GYKAMRHFLLDTIEQAVEQCEFILVGGMTGTGKTEVLAQLGNSLDLEGLANHRGSSFGKR 182 Query: 182 ASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLE 241 A+PQPS IDFE+ LAI L+K++A G F +EDE+RL+G C++PL L Q MQ P++WLE Sbjct: 183 ATPQPSQIDFENALAIRLLKMRAAGIESFVIEDEARLVGRCSIPLPLFQGMQQFPLIWLE 242 Query: 242 DSREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQL 301 DS +GRVERIL+DYV LC E+++ GF + L +L + KRLG +RY++L L Sbjct: 243 DSLQGRVERILKDYVIDLCAEFISEQGENGFAAFAERLQQSLVNINKRLGGERYQRLALL 302 Query: 302 METALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQY 361 M+ ALA Q + G VDLHRAWI+ALL +YYDP+YA+QRE+K R+ FAG Q VV++LR Sbjct: 303 MDQALAEQARSGAVDLHRAWIEALLGEYYDPMYAYQRESKAERIEFAGDQPSVVEYLRNR 362 Query: 362 R 362 + Sbjct: 363 K 363 >ref|YP_004353097.1| tRNA 2-selenouridine synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68093.1| tRNA 2-selenouridine synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 367 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 226/358 (63%), Positives = 278/358 (77%) Query: 3 DLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAIE 62 D+ RD+FL D PM+D RAPVEF KGAFP +NLPLM DSER +VG YK++GQQ+AI Sbjct: 4 DITDYRDIFLNDRPMMDTRAPVEFIKGAFPGVINLPLMTDSERQRVGTCYKQQGQQAAIV 63 Query: 63 LGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAGG 122 LGHQLVSG +K RI AW +FA+THPDG LYCFRGGLRSQI QQWLK EAGI YPRV GG Sbjct: 64 LGHQLVSGEIKAERIRAWVEFAKTHPDGVLYCFRGGLRSQIVQQWLKDEAGIDYPRVGGG 123 Query: 123 YKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKRA 182 YKA+R FL++ +EQA+A+C V++GGMTG+GKT+ L QL N+LDLE YANHRGSSFGKRA Sbjct: 124 YKAMRTFLLDTVEQAVAQCDLVLLGGMTGTGKTEALGQLSNSLDLEGYANHRGSSFGKRA 183 Query: 183 SPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLED 242 + QPS IDFE+RLA+ ++K +A G F LEDESR +G+CALPL L+QRMQ +PMVWLED Sbjct: 184 TGQPSNIDFENRLAVDVLKKRASGIEQFVLEDESRAVGSCALPLPLYQRMQQVPMVWLED 243 Query: 243 SREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQLM 302 S E RVERIL+DYV LC E+V + GF + LLA+L + KRLG R+R+L+ ++ Sbjct: 244 SLEHRVERILQDYVIDLCAEFVAVHGDEGFSLFSERLLASLDNIHKRLGGDRHRRLMNIL 303 Query: 303 ETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 ETALA Q G VDLHR WI+ LL +YYDP+Y FQRE K R+ F+G QA V+++LR+ Sbjct: 304 ETALAEQANSGAVDLHRGWIEGLLREYYDPMYVFQREKKGLRIEFSGEQAAVLEYLRE 361 >ref|YP_349483.1| tRNA 2-selenouridine synthase [Pseudomonas fluorescens Pf0-1] sp|Q3K9R2.1|SELU_PSEPF RecName: Full=tRNA 2-selenouridine synthase; AltName: Full=Selenophosphate-dependent tRNA 2-selenouridine synthase gb|ABA75492.1| Rhodanese-like protein [Pseudomonas fluorescens Pf0-1] Length = 367 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/358 (64%), Positives = 278/358 (77%) Query: 3 DLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAIE 62 D+ RD+FL D P++DARAPVEF KGAFP AVNLPLMND ER +VG YK GQQ+AIE Sbjct: 4 DVTDYRDIFLNDRPLMDARAPVEFHKGAFPGAVNLPLMNDIERQRVGTCYKHHGQQAAIE 63 Query: 63 LGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAGG 122 LGHQLVSG VKE RI AWA+FARTHP+G LYCFRGGLRSQI QQWLKSEAG+ YPR+ GG Sbjct: 64 LGHQLVSGPVKEERIQAWAEFARTHPEGYLYCFRGGLRSQIVQQWLKSEAGVDYPRIGGG 123 Query: 123 YKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKRA 182 YKALR FL++ +E AL +C FV++GGMTG+GKT+VL QL N++DLE +ANHRGSSFGKRA Sbjct: 124 YKALRGFLIDTLESALTDCDFVLLGGMTGTGKTEVLAQLRNSVDLEGHANHRGSSFGKRA 183 Query: 183 SPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLED 242 + QPS IDFE+RLAI L+K +A G F LEDESR++G+CALPL L+Q MQ PMVWLED Sbjct: 184 TGQPSNIDFENRLAIDLLKKRAAGIDQFVLEDESRVVGSCALPLPLYQGMQQYPMVWLED 243 Query: 243 SREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQLM 302 E RVERILRDYV L E+ + GF R+ LL +L + KRLG +R+R++ LM Sbjct: 244 RFEQRVERILRDYVVDLSAEFQAVHGEEGFGRFCERLLESLDNVHKRLGGERHRRMRVLM 303 Query: 303 ETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 E ALA Q + G V+LHRAWI+ LL +YYDP+Y FQRE K R+ FAG + V+++LRQ Sbjct: 304 EEALAEQGRSGAVELHRAWIEGLLREYYDPMYVFQREKKGGRIEFAGERQAVIEYLRQ 361 >ref|YP_259386.1| tRNA 2-selenouridine synthase [Pseudomonas fluorescens Pf-5] sp|Q4KEE7.1|SELU_PSEF5 RecName: Full=tRNA 2-selenouridine synthase; AltName: Full=Selenophosphate-dependent tRNA 2-selenouridine synthase gb|AAY91552.1| tRNA 2-selenouridine synthase [Pseudomonas fluorescens Pf-5] Length = 364 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 227/361 (62%), Positives = 278/361 (77%), Gaps = 1/361 (0%) Query: 3 DLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAIE 62 D R++FL D PM+D RAP+EF KGAFP +NLPLM D ER +VG YK++GQQ+AI Sbjct: 4 DCTDYREIFLNDRPMMDTRAPIEFTKGAFPGVLNLPLMTDQERQRVGTCYKQQGQQAAIV 63 Query: 63 LGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAGG 122 LGHQLVSGA+KE RI AWADFAR HPDG LYCFRGGLRSQI QQWL+ EAGI YPRV GG Sbjct: 64 LGHQLVSGAIKEQRIQAWADFARAHPDGLLYCFRGGLRSQIVQQWLR-EAGIDYPRVGGG 122 Query: 123 YKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKRA 182 YKA+R FL++ EQAL +C FV++GGMTG+GKT VL QLDNALDLE +ANHRGSSFG+RA Sbjct: 123 YKAMRTFLLDTTEQALQQCDFVLLGGMTGTGKTQVLGQLDNALDLEGHANHRGSSFGRRA 182 Query: 183 SPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLED 242 + QPS IDFE+RLA+ L+K + +G F LEDE+R+IG+CALPL L+Q MQ LPMVWLED Sbjct: 183 TGQPSNIDFENRLAVDLLKKRERGVQSFVLEDENRMIGSCALPLPLYQSMQGLPMVWLED 242 Query: 243 SREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQLM 302 S RV+RIL DYV LC E+V + GF + LL +L K+ KRLG +R+++L LM Sbjct: 243 SLANRVQRILDDYVVNLCAEFVAVHGEQGFALFAERLLESLNKIHKRLGGERHQRLFLLM 302 Query: 303 ETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQYR 362 E ALA Q + G V+ HRAWI+ LL +YYDP+YAFQRE+K +R+ F+G V+D+LRQ Sbjct: 303 EAALAEQARSGDVERHRAWIEGLLGEYYDPMYAFQRESKGARIEFSGEHGAVLDYLRQRS 362 Query: 363 P 363 P Sbjct: 363 P 363 >ref|YP_001632501.1| tRNA 2-selenouridine synthase [Bordetella petrii DSM 12804] sp|A9I3Z9.1|SELU_BORPD RecName: Full=tRNA 2-selenouridine synthase; AltName: Full=Selenophosphate-dependent tRNA 2-selenouridine synthase emb|CAP44233.1| conserved hypothetical protein [Bordetella petrii] Length = 374 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 225/359 (62%), Positives = 278/359 (77%), Gaps = 1/359 (0%) Query: 2 ADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAI 61 AD R+LFL D PMLD RAP EF KGAFP AVNLPLM+D+ER QVGL YK+ GQ +AI Sbjct: 3 ADTNNYRELFLRDVPMLDTRAPTEFSKGAFPGAVNLPLMDDAERQQVGLCYKQRGQDAAI 62 Query: 62 ELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAG 121 LGHQLVSG +K R+AAWADFAR HPDG LYCFRGGLRSQI+Q WLK+EAGI YPRV G Sbjct: 63 ALGHQLVSGPIKARRVAAWADFARAHPDGYLYCFRGGLRSQISQAWLKNEAGIEYPRVIG 122 Query: 122 GYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKR 181 GYKA+R FL++ I+ A+A+C FVV+GGMTG+GKTD+L QLDN+LDLE +A+HRGSSFGK Sbjct: 123 GYKAMRGFLLQTIDDAVAQCGFVVLGGMTGTGKTDLLRQLDNSLDLEHHAHHRGSSFGKH 182 Query: 182 ASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLE 241 A QP+ IDF++RLAI ++K +A GH F LEDES+ IGAC+LP L++ MQ P+VWLE Sbjct: 183 AVGQPTQIDFDNRLAIDILKKRAAGHDRFVLEDESQAIGACSLPFELYRGMQEYPVVWLE 242 Query: 242 DSREGRVERILRDYVSGLCDEYVTL-DPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQ 300 D+ E RV RILRDYV LC E+V + P GF+R+ L +L + +RLG +R+RQL Sbjct: 243 DTTENRVNRILRDYVIDLCAEFVDVHGPEQGFDRFAERLRQSLDNISRRLGGERHRQLAG 302 Query: 301 LMETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLR 359 +M+ ALA Q++ G VD HRAWI ALLAQYYDP+YA+QR+ K R++FAG V+ +LR Sbjct: 303 VMDAALAEQQRSGRVDAHRAWIAALLAQYYDPMYAYQRQRKSQRIVFAGDHQSVLQYLR 361 >ref|ZP_07774585.1| tRNA 2-selenouridine synthase [Pseudomonas fluorescens WH6] gb|EFQ64297.1| tRNA 2-selenouridine synthase [Pseudomonas fluorescens WH6] Length = 367 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 219/357 (61%), Positives = 274/357 (76%) Query: 2 ADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAI 61 D+ RD+FL D PM+D RAPVEF KGAFP +NLPLM D ER +VG YK++GQQ+AI Sbjct: 3 TDITDYRDIFLNDRPMMDTRAPVEFTKGAFPGVINLPLMTDDERQRVGTCYKQQGQQAAI 62 Query: 62 ELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAG 121 LGH+LVSGA+K R+ WA FA+ +P+G LYCFRGGLRSQI QQWLK+EAGI YPRV G Sbjct: 63 VLGHELVSGAIKAKRVEQWAQFAQANPNGYLYCFRGGLRSQIVQQWLKTEAGIDYPRVGG 122 Query: 122 GYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKR 181 GYKA+R FL+E IEQA A+C FV++GGMTG+GKT+VL QL NALDLE +ANHRGSSFGKR Sbjct: 123 GYKAMRTFLVETIEQATAQCDFVLLGGMTGTGKTEVLGQLHNALDLEGHANHRGSSFGKR 182 Query: 182 ASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLE 241 A+ QPS IDFE+RLA+ L+K +A G F +EDESR+IG+CALPL LH+ MQ+ MVWLE Sbjct: 183 ATTQPSNIDFENRLAVDLLKKRAAGIEQFVVEDESRMIGSCALPLPLHKGMQTYSMVWLE 242 Query: 242 DSREGRVERILRDYVSGLCDEYVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQL 301 DS EGRVERILRDYV LC E++ + G + L +L + KRLG +R+++L + Sbjct: 243 DSVEGRVERILRDYVVELCAEFIGVFGENGHALFAERLTQSLANIHKRLGGERFQRLHAI 302 Query: 302 METALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFL 358 M+ ALA Q + G VDLHR WI+ LL +YYDP+YAFQRE+K +R+ F G Q V+++L Sbjct: 303 MQDALAEQARSGAVDLHRGWIEGLLREYYDPMYAFQRESKGARIEFVGEQGAVLEYL 359 >ref|YP_004380098.1| tRNA 2-selenouridine synthase [Pseudomonas mendocina NK-01] gb|AEB58346.1| tRNA 2-selenouridine synthase [Pseudomonas mendocina NK-01] Length = 366 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/354 (63%), Positives = 272/354 (76%), Gaps = 1/354 (0%) Query: 8 RDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAIELGHQL 67 RDLFL D PM+DARAPVEF KGAFP VNLPLMND ER +VG YK+ GQQ+AIELGHQL Sbjct: 9 RDLFLHDRPMMDARAPVEFVKGAFPGVVNLPLMNDIERQKVGTCYKQHGQQAAIELGHQL 68 Query: 68 VSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAGGYKALR 127 VSG K RI AWA FA+ +PDG LYCFRGGLRSQI QQWLKSEAGI YPRV GGYKA+R Sbjct: 69 VSGRNKTERIEAWAAFAKANPDGYLYCFRGGLRSQIVQQWLKSEAGIDYPRVVGGYKAMR 128 Query: 128 HFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKRASPQPS 187 +FL+ EQA+ EC FV+VGGMTG+GKT+VL QLDNA+DLEA+ANHRGSSFGKRA+ QP+ Sbjct: 129 NFLLHTTEQAVQECDFVLVGGMTGTGKTEVLGQLDNAVDLEAHANHRGSSFGKRANGQPA 188 Query: 188 PIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLEDSREGR 247 IDFE+ L+I +K +A G F LEDE+RLIG C+LPL L+Q MQ P+VWLEDS R Sbjct: 189 QIDFENALSIDFLKRRASGQQQFVLEDEARLIGRCSLPLPLYQAMQHHPLVWLEDSVANR 248 Query: 248 VERILRDYVSGLCDE-YVTLDPRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQLMETAL 306 V+RIL+ YV LCDE + L GF + A L +LG + +RLG +RY++L +M+ AL Sbjct: 249 VDRILQAYVVELCDEFFAVLGAEEGFTAFAARLRESLGNITRRLGGERYQRLAAIMDQAL 308 Query: 307 ARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 Q+ DG VD HR WI+ALL +YYDP+Y FQR++K R+ FAG Q VV++LR+ Sbjct: 309 QEQQVDGQVDTHRGWIEALLVEYYDPMYVFQRQSKSGRIEFAGEQQAVVEYLRK 362 >ref|YP_002798226.1| tRNA 2-selenouridine synthase [Azotobacter vinelandii DJ] sp|C1DNN5.1|SELU_AZOVD RecName: Full=tRNA 2-selenouridine synthase; AltName: Full=Selenophosphate-dependent tRNA 2-selenouridine synthase gb|ACO77251.1| Rhodanese-like protein [Azotobacter vinelandii DJ] Length = 370 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 224/360 (62%), Positives = 276/360 (76%), Gaps = 1/360 (0%) Query: 2 ADLQPSRDLFLADTPMLDARAPVEFGKGAFPTAVNLPLMNDSERHQVGLHYKEEGQQSAI 61 AD LFL D PM+D RAPVEF GAFP +NLPLM DSER +VG YK+ GQ++AI Sbjct: 3 ADTADYPQLFLEDVPMMDTRAPVEFAGGAFPNVLNLPLMTDSERQKVGTCYKQHGQRAAI 62 Query: 62 ELGHQLVSGAVKEARIAAWADFARTHPDGCLYCFRGGLRSQITQQWLKSEAGIAYPRVAG 121 ELGH+LVSG KE RI AWADFAR HP+G LYCFRGGLRSQI QQWL+ EAGI YPRV G Sbjct: 63 ELGHRLVSGRTKELRIQAWADFARAHPEGYLYCFRGGLRSQIVQQWLRDEAGIDYPRVTG 122 Query: 122 GYKALRHFLMEAIEQALAECAFVVVGGMTGSGKTDVLLQLDNALDLEAYANHRGSSFGKR 181 GYKA+R+FL++ QA A+CAFV+VGG+TG+GKT+V+ L NALDLE +ANHRGSSFGKR Sbjct: 123 GYKAMRNFLLDTTRQATAQCAFVLVGGLTGTGKTEVIAALGNALDLEGHANHRGSSFGKR 182 Query: 182 ASPQPSPIDFEHRLAIALIKLQAQGHHWFALEDESRLIGACALPLALHQRMQSLPMVWLE 241 A+PQP+ IDFE+RLAI +++ +A G F LEDESRL+G+C+LPL LHQ MQ P+VWLE Sbjct: 183 ATPQPAQIDFENRLAIDILRKRAAGVGRFVLEDESRLVGSCSLPLELHQGMQRYPLVWLE 242 Query: 242 DSREGRVERILRDYVSGLCDEYVTLD-PRYGFERYRAHLLAALGKLVKRLGDQRYRQLVQ 300 DS EGRVERILRDYV LC E+V ++ P+ GF + A L +L +VKRLG +RY++L Sbjct: 243 DSFEGRVERILRDYVVDLCAEFVAVEGPQAGFAAFAARLTQSLANIVKRLGGERYQRLST 302 Query: 301 LMETALARQEKDGVVDLHRAWIDALLAQYYDPIYAFQREAKRSRLLFAGRQAEVVDFLRQ 360 LM ALA QE V LHR WI LL +YYDP+YA+QRE+K R++F+G + V+ +LR+ Sbjct: 303 LMARALAEQEAGRGVALHRDWIVGLLREYYDPMYAYQRESKAERIVFSGDREAVLAYLRE 362