BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0099.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776544.1| permease [Herbaspirillum seropedicae SmR1] >... 680 0.0 ref|YP_259387.2| permease family protein [Pseudomonas fluorescen... 510 e-142 ref|ZP_07774586.1| putative permease family [Pseudomonas fluores... 505 e-141 ref|YP_004753435.1| putative permease [Collimonas fungivorans Te... 463 e-128 ref|ZP_06193357.1| permease [Serratia odorifera 4Rx13] >gi|27004... 430 e-118 ref|YP_004498931.1| hypothetical protein SerAS12_0466 [Serratia ... 425 e-117 ref|YP_001476759.1| permease [Serratia proteamaculans 568] >gi|1... 417 e-114 ref|ZP_06637429.1| conserved hypothetical protein [Serratia odor... 417 e-114 ref|ZP_07450637.1| putative permease [Escherichia coli NC101] >g... 414 e-113 gb|EGB32447.1| hypothetical protein ERCG_02611 [Escherichia coli... 412 e-113 >ref|YP_003776544.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ64636.1| permease protein [Herbaspirillum seropedicae SmR1] Length = 354 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/354 (98%), Positives = 350/354 (98%) Query: 1 MSSFSSPTPTNKTSAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAP 60 MSSFSSPTPTNKTSAWLK LLF LVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAP Sbjct: 1 MSSFSSPTPTNKTSAWLKTLLFALVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAP 60 Query: 61 AAPWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFA 120 AAPWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLG+TLRGGLFA Sbjct: 61 AAPWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGSTLRGGLFA 120 Query: 121 LPGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVA 180 LPGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVA Sbjct: 121 LPGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVA 180 Query: 181 GILLVLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAP 240 GILLVLGVALIAQRVAQSETLPQAAMDALAA EYEPLEDGRHFLVRWGSKLWQLFWTTAP Sbjct: 181 GILLVLGVALIAQRVAQSETLPQAAMDALAAAEYEPLEDGRHFLVRWGSKLWQLFWTTAP 240 Query: 241 VYIVAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGM 300 VYIVAVLALGAARVWLFPQVD AMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGM Sbjct: 241 VYIVAVLALGAARVWLFPQVDVAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGM 300 Query: 301 GVGPAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 GVGPAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL Sbjct: 301 GVGPAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 >ref|YP_259387.2| permease family protein [Pseudomonas fluorescens Pf-5] gb|AAY91553.2| permease family protein [Pseudomonas fluorescens Pf-5] Length = 351 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 255/354 (72%), Positives = 299/354 (84%), Gaps = 3/354 (0%) Query: 1 MSSFSSPTPTNKTSAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAP 60 MS+ +S P + W KPLLF+LVAA+GLYYVKWSPYY K+FVAAD HSIGASIL + Sbjct: 1 MSNLASTQPNRGWAFWCKPLLFLLVAAIGLYYVKWSPYYLKAFVAADSHSIGASILNDQQ 60 Query: 61 AAPWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFA 120 ++PWSAAL Y+++YFLAIWKAAVL ++LGSL+QVLIPRDWLLR+FGRAG +TLRGGLFA Sbjct: 61 SSPWSAALAYSQVYFLAIWKAAVLAVILGSLLQVLIPRDWLLRLFGRAGFSSTLRGGLFA 120 Query: 121 LPGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVA 180 LPGMMCSCCAAPV AG+RRQ+VSVGAALAFWIANPVLNPATLVFMGFVLGW F+ALRLVA Sbjct: 121 LPGMMCSCCAAPVAAGLRRQKVSVGAALAFWIANPVLNPATLVFMGFVLGWGFSALRLVA 180 Query: 181 GILLVLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAP 240 GI+LVLGV+L+AQR+A E LP+AA+DA+ E + D + FL RWG LWQLFW+T P Sbjct: 181 GIVLVLGVSLVAQRIAGPEQLPEAAVDAV--VEASTVND-QPFLSRWGKTLWQLFWSTIP 237 Query: 241 VYIVAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGM 300 +Y++AVL LGAARVWLFP +D AMG+SL W+V LA+ GTLFVIPTAAEIPIVQ+M++LG+ Sbjct: 238 IYVLAVLVLGAARVWLFPHIDGAMGDSLWWLVPLAIAGTLFVIPTAAEIPIVQTMMTLGL 297 Query: 301 GVGPAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 G GPAVALLMTLPSISLPSLLMLR F +RVL TV +LTML+G GL LL Sbjct: 298 GTGPAVALLMTLPSISLPSLLMLRKDFDARVLVTVAVLTMLVGIVCGLIGAVLL 351 >ref|ZP_07774586.1| putative permease family [Pseudomonas fluorescens WH6] gb|EFQ64298.1| putative permease family [Pseudomonas fluorescens WH6] Length = 351 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 258/354 (72%), Positives = 297/354 (83%), Gaps = 3/354 (0%) Query: 1 MSSFSSPTPTNKTSAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAP 60 MS+ +S P S W KP LF+LVA VGLYYVKWSPYY K+F AAD HSIGASIL + Sbjct: 1 MSNLTSIQPNRGWSFWWKPALFLLVACVGLYYVKWSPYYFKAFAAADNHSIGASILNDQQ 60 Query: 61 AAPWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFA 120 ++P +AAL YA++YFLAIWKAAVL ++LGSL+QVLIPRDWLLR+FGRAGLG+T+RGGLFA Sbjct: 61 SSPLAAALAYAQVYFLAIWKAAVLAVILGSLLQVLIPRDWLLRLFGRAGLGSTVRGGLFA 120 Query: 121 LPGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVA 180 LPGMMCSCCAAPV AGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGW F ALRLVA Sbjct: 121 LPGMMCSCCAAPVAAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWGFTALRLVA 180 Query: 181 GILLVLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAP 240 GI+LV+GV+L+AQR+A+ E +P+AA+DA+A E LE + FL RW LWQLFW+T P Sbjct: 181 GIVLVVGVSLVAQRIARPEQVPEAALDAVA--EVSTLES-QPFLSRWLRTLWQLFWSTIP 237 Query: 241 VYIVAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGM 300 VYI+AVL LGAARVWLFP VD AM NSL+W+V LA+VGTLFVIPTAAEIPIVQ+M++LGM Sbjct: 238 VYILAVLVLGAARVWLFPHVDGAMANSLIWLVPLAIVGTLFVIPTAAEIPIVQTMMTLGM 297 Query: 301 GVGPAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 G GPAVALLMTLPS+SLPSLLMLR F +RVL TV LTML+G GL +L Sbjct: 298 GTGPAVALLMTLPSVSLPSLLMLRKDFDARVLVTVAGLTMLVGVVCGLIGAVIL 351 >ref|YP_004753435.1| putative permease [Collimonas fungivorans Ter331] gb|AEK62612.1| putative permease [Collimonas fungivorans Ter331] Length = 410 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 251/341 (73%), Positives = 283/341 (82%), Gaps = 2/341 (0%) Query: 14 SAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPAAPWSAALEYAEI 73 S W KP LFVLVA VGLYYVKWSPYY KSF+AADKHSIGASIL + AP +AAL YA++ Sbjct: 72 SFWWKPALFVLVAVVGLYYVKWSPYYLKSFLAADKHSIGASILDDQQGAPIAAALAYAKV 131 Query: 74 YFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFALPGMMCSCCAAPV 133 YFLAIWKAAVL ++LGSL+QVLIPRDWLLR+FGRAG G+ LRGGLFALPGMMCSCCAAPV Sbjct: 132 YFLAIWKAAVLAVILGSLLQVLIPRDWLLRLFGRAGFGSVLRGGLFALPGMMCSCCAAPV 191 Query: 134 VAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAGILLVLGVALIAQ 193 VAGMRRQ+VSVGAALAFWIANPVLNPATLVFMGFVLGW F ALRLVAG++LVLGV++IAQ Sbjct: 192 VAGMRRQKVSVGAALAFWIANPVLNPATLVFMGFVLGWGFTALRLVAGLVLVLGVSMIAQ 251 Query: 194 RVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPVYIVAVLALGAAR 253 R+++ E +P AA P FL RW +WQLFW+T PVY++AVL LGAAR Sbjct: 252 RISRPEEIPAAAAAEAVVAASAPART--DFLGRWARTIWQLFWSTIPVYVLAVLVLGAAR 309 Query: 254 VWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMGVGPAVALLMTLP 313 VWLFP VD AMGNSLLW+V LA+ GTLFVIPTAAEIPIVQ+M++LG+G PAVALLMTLP Sbjct: 310 VWLFPHVDGAMGNSLLWLVPLAIAGTLFVIPTAAEIPIVQTMMALGLGTAPAVALLMTLP 369 Query: 314 SISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 SISLPSLLMLR F +RVL V +LTML+G SGL ALL Sbjct: 370 SISLPSLLMLRKDFDARVLVAVAVLTMLVGVVSGLVGAALL 410 >ref|ZP_06193357.1| permease [Serratia odorifera 4Rx13] gb|EFA14129.1| permease [Serratia odorifera 4Rx13] Length = 352 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 224/348 (64%), Positives = 264/348 (75%), Gaps = 5/348 (1%) Query: 9 PTNKTSAW--LKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPAAPWSA 66 P N AW KP+LF+LV A+GLYYVKW PYY K+F+AAD HSIG SILANA ++PW A Sbjct: 8 PENTARAWPLWKPILFLLVVAIGLYYVKWQPYYGKAFLAADTHSIGKSILANADSSPWQA 67 Query: 67 ALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFALPGMMC 126 A YA +YF A+WKAAVLG++LGSLVQVLIPRDWLLR G TL G ALPGMMC Sbjct: 68 AWHYALVYFTAVWKAAVLGVLLGSLVQVLIPRDWLLRTLGHPRFSGTLLGAAIALPGMMC 127 Query: 127 SCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAGILLVL 186 +CCAAPV AG+RRQ VS GAA+AFW++NPVLNPATL+FMGFVLGW FAA+RLVAG+++VL Sbjct: 128 TCCAAPVAAGLRRQSVSSGAAMAFWLSNPVLNPATLIFMGFVLGWPFAAIRLVAGVIMVL 187 Query: 187 GVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPVYIVAV 246 GVA + QRV + P AA+ A + E R FL RW LW LFW T PVYIVAV Sbjct: 188 GVAWLVQRVTARDPQP-AALQPPAVPRVKTEE--RPFLGRWLKALWTLFWATIPVYIVAV 244 Query: 247 LALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMGVGPAV 306 LALGAARVWLFP D A+ NSLLWI+ALA+ G LFVIPTAAEIPIVQ+M+ GMG GPA+ Sbjct: 245 LALGAARVWLFPHADGAIDNSLLWIIALAIAGCLFVIPTAAEIPIVQTMMLAGMGTGPAL 304 Query: 307 ALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 ALLMTLP++SLPSLLML F+++ L LL +L G A+GL + L+ Sbjct: 305 ALLMTLPAVSLPSLLMLNKVFSAKALCLTALLVVLCGIATGLVGMGLV 352 >ref|YP_004498931.1| hypothetical protein SerAS12_0466 [Serratia sp. AS12] ref|YP_004503883.1| hypothetical protein SerAS9_0466 [Serratia sp. AS9] gb|AEF43622.1| Protein of unknown function DUF318, transmembrane [Serratia sp. AS9] gb|AEF48574.1| Protein of unknown function DUF318, transmembrane [Serratia sp. AS12] gb|AEG26282.1| Protein of unknown function DUF318, transmembrane [Serratia sp. AS13] Length = 352 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 225/350 (64%), Positives = 263/350 (75%), Gaps = 6/350 (1%) Query: 8 TPTNKTS-AW--LKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPAAPW 64 T + KTS AW KP+LF+LV A+GLYYVKW PYY K+F+AAD HSIG SILANA + PW Sbjct: 6 TASEKTSRAWPLWKPILFLLVVAIGLYYVKWQPYYGKAFLAADTHSIGKSILANADSNPW 65 Query: 65 SAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFALPGM 124 AA YA +YF A+WKAAVLG++LGSLVQVLIPRDWL+R G TL G ALPGM Sbjct: 66 LAAWHYALVYFTAVWKAAVLGVLLGSLVQVLIPRDWLMRTLGHPRFSGTLLGAAIALPGM 125 Query: 125 MCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAGILL 184 MC+CCAAPV AG+RRQ VS GAA+AFW++NPVLNPATL+FMGFVLGW FAA+RLVAG+++ Sbjct: 126 MCTCCAAPVAAGLRRQSVSSGAAMAFWLSNPVLNPATLIFMGFVLGWPFAAIRLVAGVIM 185 Query: 185 VLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPVYIV 244 VLGVA + QRV E PQ A ED R FL RW LW LFW T PVYIV Sbjct: 186 VLGVAWLVQRVTARE--PQPVTLQPPAVPQVRTED-RPFLGRWLKALWALFWATIPVYIV 242 Query: 245 AVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMGVGP 304 AVLALGAARVWLFP D A+ NSLLWI+ALA+ G LFVIPTAAEIPIVQ+M+ GMG P Sbjct: 243 AVLALGAARVWLFPHADGAIDNSLLWIIALAIAGCLFVIPTAAEIPIVQTMMLAGMGTAP 302 Query: 305 AVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 A+ALLMTLP++SLPSLLML F+++ L LL +L G A+GL + L+ Sbjct: 303 ALALLMTLPAVSLPSLLMLNKVFSAKALCLTALLVVLCGIATGLVGMGLM 352 >ref|YP_001476759.1| permease [Serratia proteamaculans 568] gb|ABV39631.1| permease [Serratia proteamaculans 568] Length = 373 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 210/340 (61%), Positives = 256/340 (75%), Gaps = 9/340 (2%) Query: 18 KPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPAAPWSAALEYAEIYFLA 77 KP+LF+LV AVGLYYVKW PYY K+F+AAD HSIG SILAN ++PW AA YA +YF A Sbjct: 40 KPILFLLVVAVGLYYVKWQPYYGKAFLAADTHSIGKSILANGDSSPWLAAWHYALVYFTA 99 Query: 78 IWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFALPGMMCSCCAAPVVAGM 137 +WKAAVLG+VLGSLVQVLIPRDWL+R G TL G ALPGMMC+CCAAPV AG+ Sbjct: 100 VWKAAVLGVVLGSLVQVLIPRDWLMRTLGHPRFSGTLLGAAIALPGMMCTCCAAPVAAGL 159 Query: 138 RRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAGILLVLGVALIAQRVAQ 197 RRQ VS GAA+AFW++NPVLNPATL+FMGFVLGW FAA+RLVAG+++VLG+A + QR Sbjct: 160 RRQSVSSGAAMAFWLSNPVLNPATLIFMGFVLGWQFAAIRLVAGVIMVLGIAWLVQRATA 219 Query: 198 SETLP---QAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPVYIVAVLALGAARV 254 ++ P Q + L TE +P F RW LW LFW+T P+YI+AVLALGAARV Sbjct: 220 NDPQPAALQMPVIPLEKTEAQP------FFGRWLKALWALFWSTIPIYILAVLALGAARV 273 Query: 255 WLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMGVGPAVALLMTLPS 314 WLFP D A+ NSLLWI+ LA+ G LFVIPTAAEIPIVQ+M+ GMG GPA+ALLMTLP+ Sbjct: 274 WLFPHADGAIDNSLLWIIGLAIAGCLFVIPTAAEIPIVQTMMLAGMGTGPALALLMTLPA 333 Query: 315 ISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 +SLPSLLML +F+++ L L L G +G+ + ++ Sbjct: 334 VSLPSLLMLNKAFSAKALCLTAALVALCGIVTGVVGMGMV 373 >ref|ZP_06637429.1| conserved hypothetical protein [Serratia odorifera DSM 4582] gb|EFE97474.1| conserved hypothetical protein [Serratia odorifera DSM 4582] Length = 373 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 217/351 (61%), Positives = 262/351 (74%), Gaps = 11/351 (3%) Query: 9 PTNKTSAW--LKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPAAPWSA 66 P + AW KP+LF+LV AVGLYYVKW PYY K+F+AAD HSIG SILAN +PW A Sbjct: 29 PESPARAWPLWKPILFLLVVAVGLYYVKWQPYYGKAFLAADSHSIGNSILANPADSPWLA 88 Query: 67 ALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFALPGMMC 126 A +YA +YF A+WKAAVLG++LGSLVQVLIPRDWL+R G TL G L ALPGMMC Sbjct: 89 AWQYALVYFKAVWKAAVLGVLLGSLVQVLIPRDWLVRTLGHRRFSGTLLGTLIALPGMMC 148 Query: 127 SCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAGILLVL 186 +CCAAPV AG+RRQ VS GAALAFW++NPVLNPATL+FMGFVLGW FA +RLVAG+++VL Sbjct: 149 TCCAAPVAAGLRRQSVSSGAALAFWLSNPVLNPATLIFMGFVLGWQFAVIRLVAGVVMVL 208 Query: 187 GVALIAQRVAQSETLP---QAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPVYI 243 G+A + QR+ ++ P QAA+ A T +P F RW LW LFW+T P+YI Sbjct: 209 GIAWLVQRLTANDAPPAALQAAVMPQAKTPDQP------FFGRWIKALWALFWSTIPIYI 262 Query: 244 VAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMGVG 303 +AVL LGAARVWLFP D A+ NSLLWIV LA+ G LFVIPTAAEIPIVQ+M+ GMG G Sbjct: 263 LAVLLLGAARVWLFPHADGAVDNSLLWIVGLAIAGCLFVIPTAAEIPIVQAMMLAGMGPG 322 Query: 304 PAVALLMTLPSISLPSLLMLRHSFTSRVLTTVTLLTMLIGAASGLAAVALL 354 PA+ALLMTLP++SLPSLLML +F+++ L L L G A+GL + L+ Sbjct: 323 PALALLMTLPAVSLPSLLMLNKAFSAKALCLTAALVALCGVATGLVGLVLM 373 >ref|ZP_07450637.1| putative permease [Escherichia coli NC101] gb|EFM50529.1| putative permease [Escherichia coli NC101] gb|EGB78001.1| hypothetical protein HMPREF9532_01507 [Escherichia coli MS 57-2] Length = 346 Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust. Identities = 210/331 (63%), Positives = 251/331 (75%), Gaps = 10/331 (3%) Query: 2 SSFSSPTPTNKTSAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPA 61 SS + TP W KP LF LV GL+YVKW PYY K+F AA+ HSIG SILA A A Sbjct: 5 SSSQAATPIQ----WWKPALFFLVVIAGLWYVKWQPYYGKAFTAAETHSIGKSILAQADA 60 Query: 62 APWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFAL 121 PW AAL+YA IYFLA+WKAAVLG++LGSL+QVLIPRDWLLR G++ TL G LF+L Sbjct: 61 NPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL 120 Query: 122 PGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAG 181 PGMMC+CCAAPV AGMRRQQVS+G ALAFW+ NP+LNPATLVFMGFVLGW FAA+RLVAG Sbjct: 121 PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPLLNPATLVFMGFVLGWGFAAIRLVAG 180 Query: 182 ILLVLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPV 241 +++VL +A + Q+ + QA + E + LE F RWG LW LFW+T PV Sbjct: 181 LVMVLLIATLVQKWVRETPQTQAPV------EIDILESQGGFFSRWGRALWTLFWSTIPV 234 Query: 242 YIVAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMG 301 YI+AVL LGAARVWLFP D A+ NSL+W+VA+AV G LFVIPTAAEIPIVQ+M+ GMG Sbjct: 235 YILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMG 294 Query: 302 VGPAVALLMTLPSISLPSLLMLRHSFTSRVL 332 PA+ALLMTLP++SLPSL+MLR +F ++ L Sbjct: 295 TAPALALLMTLPAVSLPSLIMLRKAFPTKAL 325 >gb|EGB32447.1| hypothetical protein ERCG_02611 [Escherichia coli E1520] Length = 346 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/331 (63%), Positives = 250/331 (75%), Gaps = 10/331 (3%) Query: 2 SSFSSPTPTNKTSAWLKPLLFVLVAAVGLYYVKWSPYYAKSFVAADKHSIGASILANAPA 61 SS + TP W KP LF LV GL+YVKW PYY K+F AA+ HSIG SILA A A Sbjct: 5 SSSQAATPIQ----WWKPALFFLVVIAGLWYVKWEPYYGKAFTAAETHSIGKSILAQADA 60 Query: 62 APWSAALEYAEIYFLAIWKAAVLGIVLGSLVQVLIPRDWLLRMFGRAGLGATLRGGLFAL 121 PW AAL+YA IYFLA+WKAAVLG++LGSL+QVLIPRDWLLR G++ TL G LF+L Sbjct: 61 NPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSL 120 Query: 122 PGMMCSCCAAPVVAGMRRQQVSVGAALAFWIANPVLNPATLVFMGFVLGWHFAALRLVAG 181 PGMMC+CCAAPV AGMRRQQVS+G ALAFW+ NPVLNPATLVFMGFVLGW FAA+RLVAG Sbjct: 121 PGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAG 180 Query: 182 ILLVLGVALIAQRVAQSETLPQAAMDALAATEYEPLEDGRHFLVRWGSKLWQLFWTTAPV 241 +++VL +A + Q+ + QA + E + E F RWG LW LFW+T PV Sbjct: 181 LVMVLLIATLVQKWVRETPQTQAPV------EIDIPEAQGGFFSRWGRALWTLFWSTIPV 234 Query: 242 YIVAVLALGAARVWLFPQVDAAMGNSLLWIVALAVVGTLFVIPTAAEIPIVQSMLSLGMG 301 YI+AVL LGAARVWLFP D A+ NSL+W+VA+AV G LFVIPTAAEIPIVQ+M+ GMG Sbjct: 235 YILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVIPTAAEIPIVQTMMLAGMG 294 Query: 302 VGPAVALLMTLPSISLPSLLMLRHSFTSRVL 332 PA+ALLMTLP++SLPSL+MLR SF ++ L Sbjct: 295 TAPALALLMTLPAVSLPSLIMLRKSFPAKAL 325