BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0091.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776537.1| transcription regulator protein [Herbaspiril... 340 4e-92 ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimon... 283 8e-75 ref|YP_001100496.1| repressor of the iscRSUA operon, involved in... 265 2e-69 ref|YP_001352941.1| iron-sulfur cluster assembly transcription f... 265 3e-69 ref|YP_001898465.1| BadM/Rrf2 family transcriptional regulator [... 249 9e-65 ref|YP_002980920.1| BadM/Rrf2 family transcriptional regulator [... 249 9e-65 gb|AEG69647.1| DNA-binding transcriptional repressor; iron-sulfu... 248 1e-64 ref|YP_002260027.1| protein of unknown function upf0074 [Ralston... 248 2e-64 emb|CAQ37457.1| protein of unknown function upf0074 [Ralstonia s... 248 2e-64 ref|NP_519139.1| hypothetical protein RSc1018 [Ralstonia solanac... 247 5e-64 >ref|YP_003776537.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64629.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 340 bits (872), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE Sbjct: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA Sbjct: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 >ref|YP_004753779.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] gb|AEK62956.1| Iron-sulfur cluster regulator IscR [Collimonas fungivorans Ter331] Length = 164 Score = 283 bits (723), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 141/164 (85%), Positives = 147/164 (89%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLARKA DV+VADIIIAVDEPLDATQCGGKENCHS H GG+RCMTHDLWSTLN Sbjct: 61 PGGGYNLARKAEDVTVADIIIAVDEPLDATQCGGKENCHSPDHEGGSRCMTHDLWSTLNA 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAAA 164 KMVEYLDSVSL+DLVDQQ + A+ R A Q+VVVMHR A Sbjct: 121 KMVEYLDSVSLKDLVDQQHAQQQAQQRKALEQNVVVMHRSHLVA 164 >ref|YP_001100496.1| repressor of the iscRSUA operon, involved in assembly of Fe-S clusters [Herminiimonas arsenicoxydans] emb|CAL62374.1| Iron-sulfur cluster assembly transcription factor IscR [Herminiimonas arsenicoxydans] Length = 157 Score = 265 bits (676), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/163 (79%), Positives = 139/163 (85%), Gaps = 7/163 (4%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAA 163 KMV+YLDSVSL+DLVDQQK+ Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQK-------VSEQCVVVVHRNHAA 156 >ref|YP_001352941.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] gb|ABR90077.1| iron-sulfur cluster assembly transcription factor [Janthinobacterium sp. Marseille] Length = 157 Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 131/163 (80%), Positives = 142/163 (87%), Gaps = 7/163 (4%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ GPVTL+ IS+RQEISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQDNGPVTLAGISQRQEISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGYNLAR+A DV+VADIIIAVDEPLDATQCGGKENCHS H G RCMTHDLW+TLN Sbjct: 61 PGGGYNLARRAEDVTVADIIIAVDEPLDATQCGGKENCHSPEHEHGGRCMTHDLWATLNA 120 Query: 121 KMVEYLDSVSLQDLVDQQKEPKPAEHRAADSQSVVVMHRPQAA 163 KMV+YLDSVSL+DLVDQQK+ K +E Q VVV+HR AA Sbjct: 121 KMVDYLDSVSLKDLVDQQKQ-KISE------QCVVVVHRNHAA 156 >ref|YP_001898465.1| BadM/Rrf2 family transcriptional regulator [Ralstonia pickettii 12J] gb|ACD26033.1| transcriptional regulator, BadM/Rrf2 family [Ralstonia pickettii 12J] Length = 197 Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGG--ARCMTHDLWSTL 118 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H GG RCMTHDLW+TL Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL 120 Query: 119 NEKMVEYLDSVSLQDLVDQQKEPKP 143 N+KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 121 NQKMVEYLDSVSLQNLVDQQRERQP 145 >ref|YP_002980920.1| BadM/Rrf2 family transcriptional regulator [Ralstonia pickettii 12D] ref|ZP_07675880.1| iron-sulfur cluster assembly transcription factor IscR [Ralstonia sp. 5_7_47FAA] gb|ACS62248.1| transcriptional regulator, BadM/Rrf2 family [Ralstonia pickettii 12D] gb|EFP65624.1| iron-sulfur cluster assembly transcription factor IscR [Ralstonia sp. 5_7_47FAA] Length = 197 Score = 249 bits (636), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 119/145 (82%), Positives = 132/145 (91%), Gaps = 2/145 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGG--ARCMTHDLWSTL 118 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H GG RCMTHDLW+TL Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHVGGHTGRCMTHDLWATL 120 Query: 119 NEKMVEYLDSVSLQDLVDQQKEPKP 143 N+KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 121 NQKMVEYLDSVSLQNLVDQQRERQP 145 >gb|AEG69647.1| DNA-binding transcriptional repressor; iron-sulfur cluster assembly transcription factor [Ralstonia solanacearum Po82] Length = 210 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 18 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 77 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 78 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 135 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQDLVDQQ+E +P Sbjct: 136 KMVEYLDSVSLQDLVDQQRERQP 158 >ref|YP_002260027.1| protein of unknown function upf0074 [Ralstonia solanacearum IPO1609] emb|CAQ61961.1| protein of unknown function upf0074 [Ralstonia solanacearum IPO1609] Length = 193 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQDLVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQDLVDQQRERQP 141 >emb|CAQ37457.1| protein of unknown function upf0074 [Ralstonia solanacearum MolK2] Length = 193 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 119/143 (83%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQDLVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQDLVDQQRERQP 141 >ref|NP_519139.1| hypothetical protein RSc1018 [Ralstonia solanacearum GMI1000] emb|CAD14720.1| putative of unknown function upf0074; transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CBJ38178.1| DNA-binding transcriptional repressor; iron-sulfur cluster assembly transcription factor [Ralstonia solanacearum CMR15] Length = 193 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 118/143 (82%), Positives = 131/143 (91%), Gaps = 2/143 (1%) Query: 1 MRLTTKGRFAVTAMIDLALRQGKGPVTLSAISERQEISLSYLEQLFGKLRRHQIVESVRG 60 MRLTTKGRFAVTAMIDLALRQ +GPVTL+ IS+RQ+ISLSYLEQLFGKLRRH+IVESVRG Sbjct: 1 MRLTTKGRFAVTAMIDLALRQEQGPVTLAGISQRQKISLSYLEQLFGKLRRHEIVESVRG 60 Query: 61 PGGGYNLARKAADVSVADIIIAVDEPLDATQCGGKENCHSASHPGGARCMTHDLWSTLNE 120 PGGGY+LAR+A DV+VADIIIAVDEPLDATQCGGK NC H G RCMTHDLW+TLN+ Sbjct: 61 PGGGYSLARRADDVTVADIIIAVDEPLDATQCGGKGNCGGEEHSG--RCMTHDLWATLNQ 118 Query: 121 KMVEYLDSVSLQDLVDQQKEPKP 143 KMVEYLDSVSLQ+LVDQQ+E +P Sbjct: 119 KMVEYLDSVSLQNLVDQQRERQP 141