BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0075.p (357 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776518.1| nitrogen regulation (sensor histidine kinase... 717 0.0 gb|AAC32390.3| histidine kinase [Herbaspirillum seropedicae] 677 0.0 ref|YP_001099260.1| two-component system sensory histidine kinas... 601 e-170 ref|ZP_08273340.1| Nitrogen regulation protein NR(II) [Oxalobact... 588 e-166 ref|YP_004754184.1| nitrogen regulation protein NR(II) [Collimon... 578 e-163 ref|YP_001352770.1| nitrogen regulation (sensor protein kinase) ... 577 e-163 ref|ZP_04578239.1| two-component system sensory histidine kinase... 476 e-132 ref|ZP_04576048.1| two-component system sensory histidine kinase... 472 e-131 ref|YP_296263.1| signal transduction histidine kinase, nitrogen ... 449 e-124 ref|YP_548642.1| signal transduction histidine kinase NtrB [Pola... 448 e-124 >ref|YP_003776518.1| nitrogen regulation (sensor histidine kinase) transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64610.1| nitrogen regulation (sensor histidine kinase) transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 366 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/357 (100%), Positives = 357/357 (100%) Query: 1 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL 60 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL Sbjct: 10 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL 69 Query: 61 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 120 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR Sbjct: 70 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 129 Query: 121 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 180 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD Sbjct: 130 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 189 Query: 181 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 240 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK Sbjct: 190 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 249 Query: 241 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 300 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG Sbjct: 250 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 309 Query: 301 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP Sbjct: 310 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 366 >gb|AAC32390.3| histidine kinase [Herbaspirillum seropedicae] Length = 364 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/357 (96%), Positives = 348/357 (97%), Gaps = 2/357 (0%) Query: 1 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL 60 MKTPFPSLEGLDLLA ++ AEGGIVYANAAA +SSFKVLSQQKLSELFLNGKEL Sbjct: 10 MKTPFPSLEGLDLLALIILD--AEGGIVYANAAARTCWKSSFKVLSQQKLSELFLNGKEL 67 Query: 61 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 120 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR Sbjct: 68 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 127 Query: 121 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 180 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD Sbjct: 128 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 187 Query: 181 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 240 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK Sbjct: 188 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 247 Query: 241 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 300 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG Sbjct: 248 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 307 Query: 301 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP Sbjct: 308 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 364 >ref|YP_001099260.1| two-component system sensory histidine kinase [Herminiimonas arsenicoxydans] emb|CAL61133.1| Nitrogen regulation protein NR(II) [Herminiimonas arsenicoxydans] Length = 357 Score = 601 bits (1549), Expect = e-170, Method: Compositional matrix adjust. Identities = 293/357 (82%), Positives = 322/357 (90%) Query: 1 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL 60 MK P S GLDLLASAV++L ++G I YAN AAENLLE+S KVL+ +L+ELFLN EL Sbjct: 1 MKKPSISFGGLDLLASAVLVLRSDGYIAYANPAAENLLENSNKVLATHRLNELFLNADEL 60 Query: 61 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 120 +F QA+EHQFADKR DL LER REPLQVH +VT LDNPD+PVL+ELRENVQQLKLDR Sbjct: 61 DVVFQQAVEHQFADKRQDLTLERMGREPLQVHMVVTALDNPDLPVLMELRENVQQLKLDR 120 Query: 121 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 180 EER+ DQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERH+KELREYTQVIIKEAD Sbjct: 121 EERLIDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHVKELREYTQVIIKEAD 180 Query: 181 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 240 RLQTLVDRLLAPHR HIVGDVNIHEVCERVRSL++AEFP GL I+RDYDLSIPEFRGDK Sbjct: 181 RLQTLVDRLLAPHRSLHIVGDVNIHEVCERVRSLIVAEFPSGLKIRRDYDLSIPEFRGDK 240 Query: 241 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 300 EQLIQAVLNI HNAAQ L+ I++GD E++LRTR++R VTL+KVRYRLALDLHIIDNGPG Sbjct: 241 EQLIQAVLNIAHNAAQVLSSHIKSGDAEIVLRTRIARNVTLAKVRYRLALDLHIIDNGPG 300 Query: 301 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 IPPDIQDRIFYPLVSGR+GGSGLGLTLAQTFV QHMG+IEC+SRPGCTDFRILIPLP Sbjct: 301 IPPDIQDRIFYPLVSGRDGGSGLGLTLAQTFVQQHMGLIECESRPGCTDFRILIPLP 357 >ref|ZP_08273340.1| Nitrogen regulation protein NR(II) [Oxalobacteraceae bacterium IMCC9480] gb|EGF33191.1| Nitrogen regulation protein NR(II) [Oxalobacteraceae bacterium IMCC9480] Length = 357 Score = 588 bits (1515), Expect = e-166, Method: Compositional matrix adjust. Identities = 286/357 (80%), Positives = 320/357 (89%) Query: 1 MKTPFPSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKEL 60 MK PF S+ GLDLLASAV+ILDAEG I YANAAAEN+LE SF++L Q L LF+NG +L Sbjct: 1 MKIPFNSVAGLDLLASAVVILDAEGRITYANAAAENMLECSFRLLDQHLLFGLFVNGDKL 60 Query: 61 SALFYQAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDR 120 +F QA+ H+FA+KR DL L+R RE LQVH +VT LDNPD PVL+E+RENVQQLKLDR Sbjct: 61 ETVFRQAVAHEFAEKRQDLTLQRIGRESLQVHVVVTALDNPDSPVLIEMRENVQQLKLDR 120 Query: 121 EERIFDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 180 EER+ DQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD Sbjct: 121 EERLLDQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEAD 180 Query: 181 RLQTLVDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDK 240 RLQTLVDRLLAPHR PHIVGDVNIHEVCERVRSL++AEFP GL I+RDYDLS+P+FRGDK Sbjct: 181 RLQTLVDRLLAPHRRPHIVGDVNIHEVCERVRSLMVAEFPSGLEIRRDYDLSLPDFRGDK 240 Query: 241 EQLIQAVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPG 300 EQLIQ VLNI HNAAQAL++RIR GD L L+TRV+RQVTL+KVRYRLALDLHI+DNGPG Sbjct: 241 EQLIQVVLNIAHNAAQALSERIRLGDAVLTLQTRVARQVTLAKVRYRLALDLHILDNGPG 300 Query: 301 IPPDIQDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 IP +I+DRIF+PLVSGR+GGSGLGLTLAQTF+ QH GVIEC+S+PGCTDFRILIPLP Sbjct: 301 IPTEIRDRIFFPLVSGRDGGSGLGLTLAQTFIQQHSGVIECESQPGCTDFRILIPLP 357 >ref|YP_004754184.1| nitrogen regulation protein NR(II) [Collimonas fungivorans Ter331] gb|AEK63361.1| Nitrogen regulation protein NR(II) [Collimonas fungivorans Ter331] Length = 427 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 284/351 (80%), Positives = 317/351 (90%) Query: 7 SLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFYQ 66 +L LDLLASAV++LD G +V+ANAAAENLLESS ++L QQ LS+LFLN +L A+F Q Sbjct: 77 ALASLDLLASAVLVLDQHGRLVFANAAAENLLESSSRLLQQQTLSDLFLNPDQLLAIFEQ 136 Query: 67 AIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIFD 126 A++HQF D R DL+LER REPL V TIVT LDNPDMPVL+ELRENVQQLKL+REER+ D Sbjct: 137 ALQHQFDDSRQDLILERVGREPLWVDTIVTALDNPDMPVLIELRENVQQLKLEREERLID 196 Query: 127 QSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTLV 186 QSQ NKELIRNLAHEIKNPLGGIRGAAQLLELELPERH+KELREYTQVIIKEADRLQTLV Sbjct: 197 QSQVNKELIRNLAHEIKNPLGGIRGAAQLLELELPERHVKELREYTQVIIKEADRLQTLV 256 Query: 187 DRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQA 246 DRLLAPHR IVGDVNIHEVCERVRSL++AEFP GL+IKRDYDLSIP+FRGDKEQLIQA Sbjct: 257 DRLLAPHRLAQIVGDVNIHEVCERVRSLIVAEFPSGLSIKRDYDLSIPQFRGDKEQLIQA 316 Query: 247 VLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDIQ 306 +LNI HNAAQAL +RI+AGD EL+ ++R+ RQVTL+KVRYRLALDLHIIDNGPGIP +IQ Sbjct: 317 ILNIAHNAAQALQERIKAGDAELVFQSRIVRQVTLAKVRYRLALDLHIIDNGPGIPAEIQ 376 Query: 307 DRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 +RIFYPLVSGR+GGSGLGLTLAQTFV QHMGVIEC+SRPG TDFRILIPLP Sbjct: 377 ERIFYPLVSGRDGGSGLGLTLAQTFVQQHMGVIECESRPGYTDFRILIPLP 427 >ref|YP_001352770.1| nitrogen regulation (sensor protein kinase) transcription regulator [Janthinobacterium sp. Marseille] gb|ABR89080.1| nitrogen regulation (sensor protein kinase) transcription regulator [Janthinobacterium sp. Marseille] Length = 345 Score = 577 bits (1488), Expect = e-163, Method: Compositional matrix adjust. Identities = 280/345 (81%), Positives = 313/345 (90%) Query: 13 LLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFYQAIEHQF 72 +LASAV++L + I YAN AAE LLESS K L+ KL+ELF+N +EL +F +A+EHQF Sbjct: 1 MLASAVLVLRPDSDIAYANPAAEILLESSSKALTNHKLNELFINCEELEQVFQEALEHQF 60 Query: 73 ADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIFDQSQANK 132 ADKRLDLVLER R+PLQVH +V+ LD+ + PVL+ELRENVQQLKLDREER+ DQSQANK Sbjct: 61 ADKRLDLVLERHGRDPLQVHVVVSALDSAETPVLIELRENVQQLKLDREERLIDQSQANK 120 Query: 133 ELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTLVDRLLAP 192 ELIRNLAHEIKNPLGGIRGAAQLLE+ELPERHLKE REYTQVIIKEADRLQTLVDRLLAP Sbjct: 121 ELIRNLAHEIKNPLGGIRGAAQLLEMELPERHLKEFREYTQVIIKEADRLQTLVDRLLAP 180 Query: 193 HRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQAVLNIVH 252 HR PHIVGDVNIHEVCERVRSL+++EFP GL IKRDYDLS+PEFRGDKEQLIQAVLNI H Sbjct: 181 HRSPHIVGDVNIHEVCERVRSLIVSEFPNGLKIKRDYDLSVPEFRGDKEQLIQAVLNIAH 240 Query: 253 NAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDIQDRIFYP 312 NAAQ L+ R++AGD EL LRTR++RQVTL+KVRYRLALDLHIIDNGPGIPPDI+DRIFYP Sbjct: 241 NAAQVLSARMKAGDAELTLRTRIARQVTLAKVRYRLALDLHIIDNGPGIPPDIRDRIFYP 300 Query: 313 LVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 LVSGR+GGSGLGLTLAQTFV QHMG+IEC+SRPGCTDFRILIPLP Sbjct: 301 LVSGRDGGSGLGLTLAQTFVQQHMGLIECESRPGCTDFRILIPLP 345 >ref|ZP_04578239.1| two-component system sensory histidine kinase [Oxalobacter formigenes OXCC13] gb|EEO29212.1| two-component system sensory histidine kinase [Oxalobacter formigenes OXCC13] Length = 356 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 236/350 (67%), Positives = 277/350 (79%) Query: 7 SLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFYQ 66 SL+GLDLLA AV+ILD G IVY N AAE+L ESS KVL Q L ++F N L L Q Sbjct: 4 SLKGLDLLACAVLILDRNGAIVYVNPAAEDLFESSSKVLLSQNLKQVFPNSDVLETLCEQ 63 Query: 67 AIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIFD 126 I H + R +LVLER R L VH IV P+D PD VL+ELREN+ Q++ +RE R+ D Sbjct: 64 VISHDCLEMRQELVLERIGRAALHVHCIVRPVDLPDASVLIELRENIAQIRQERENRLVD 123 Query: 127 QSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTLV 186 Q+QANKEL+RNLAHEIKNPLGGIRGAAQLLE+ELP R +K+LREYTQVI+KE +RLQ LV Sbjct: 124 QTQANKELVRNLAHEIKNPLGGIRGAAQLLEMELPAREMKDLREYTQVIVKETERLQKLV 183 Query: 187 DRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQA 246 DRLL PHR PHI D+NIHEVCERVRSL++AE P+GL I RDYDLSIPE GDKEQLIQA Sbjct: 184 DRLLVPHRRPHIENDINIHEVCERVRSLILAEHPKGLKIWRDYDLSIPEITGDKEQLIQA 243 Query: 247 VLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDIQ 306 VLNI NAA L DRIR GD EL+ +TRVSRQVTL++VRY+LAL+LHIIDNGPGIP ++ Sbjct: 244 VLNIAQNAANVLTDRIRQGDAELVFKTRVSRQVTLARVRYKLALNLHIIDNGPGIPAELI 303 Query: 307 DRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPL 356 ++IF PLVSG EGGSGLGLTL+QT + QH G+IEC+S PG T+F I +PL Sbjct: 304 EKIFNPLVSGTEGGSGLGLTLSQTLIQQHGGIIECESVPGHTEFLIRLPL 353 >ref|ZP_04576048.1| two-component system sensory histidine kinase [Oxalobacter formigenes HOxBLS] gb|EEO27010.1| two-component system sensory histidine kinase [Oxalobacter formigenes HOxBLS] Length = 355 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 231/349 (66%), Positives = 287/349 (82%) Query: 8 LEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFYQA 67 L GLDLLASAV+ILD G I+Y N AAE+LLE S +VL QKL++LFLNG+ L + Q Sbjct: 4 LTGLDLLASAVMILDMSGRIIYVNPAAEDLLECSSRVLLSQKLAQLFLNGEVLDEICRQV 63 Query: 68 IEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIFDQ 127 H ++KR +L L+R R PL V+ IV +D P VL+ELRENVQQL+ DRE R+ DQ Sbjct: 64 GVHDPSEKRQELALDRIGRPPLHVYCIVKAVDFPGAAVLVELRENVQQLRQDRENRLMDQ 123 Query: 128 SQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTLVD 187 +QA KELIRNLAHEIKNPLGGI+GAAQLLE+ELP R++K+LREYTQVI++E++RLQ LVD Sbjct: 124 NQATKELIRNLAHEIKNPLGGIKGAAQLLEMELPGRNMKDLREYTQVIVRESERLQKLVD 183 Query: 188 RLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQAV 247 RLL P+R PHIV D+NIHEVCERVRS+++AE+P+GLT++RDYDLS+P GD+EQLIQAV Sbjct: 184 RLLIPNRRPHIVDDINIHEVCERVRSVILAEYPEGLTVRRDYDLSLPGITGDREQLIQAV 243 Query: 248 LNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDIQD 307 LNI NA ALA+RI GD EL+ +TRVSRQVTL+KVRYRLAL+LHIIDNGPGIP ++ + Sbjct: 244 LNIAKNAVHALAERIERGDAELVFKTRVSRQVTLAKVRYRLALNLHIIDNGPGIPAEMVE 303 Query: 308 RIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPL 356 +IF+PLVSG +GGSGLGLTLAQT V +H G++EC+SRPG T+F I +P+ Sbjct: 304 KIFFPLVSGTKGGSGLGLTLAQTLVQRHGGIVECESRPGRTEFLIRLPM 352 >ref|YP_296263.1| signal transduction histidine kinase, nitrogen specific, NtrB [Ralstonia eutropha JMP134] gb|AAZ61419.1| signal transduction histidine kinase, nitrogen specific, NtrB [Ralstonia eutropha JMP134] Length = 393 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 229/348 (65%), Positives = 276/348 (79%), Gaps = 4/348 (1%) Query: 10 GLDLLASAVIILDAEG-GIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFYQAI 68 GLD++A+ V+++ G G++YAN AAE+ S K + + LS+LF +EL + I Sbjct: 48 GLDVVANPVLLVRQPGLGVMYANPAAESTFAVSRKAMVELSLSDLFGQSEELQGMIDTVI 107 Query: 69 EHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIFDQS 128 QF +R DLVL +EP+ H ++ L+ VL+E+ N Q+++ DREERI D + Sbjct: 108 TRQFDVRRQDLVLRPPLQEPIHAHVVIGALEAFSDTVLVEILPNEQKVRSDREERILDLT 167 Query: 129 QANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTLVDR 188 ANKELIRNLAHEIKNPLGGIRGAAQLLE ELPER LREYTQVIIKE+DRLQTLVDR Sbjct: 168 AANKELIRNLAHEIKNPLGGIRGAAQLLEFELPER---ALREYTQVIIKESDRLQTLVDR 224 Query: 189 LLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQAVL 248 LL PHRHPHIV +NIHEV ERVRS+V+AEFP GL I+RDYD S+PE RGD EQLIQAVL Sbjct: 225 LLEPHRHPHIVSSLNIHEVLERVRSVVLAEFPNGLDIERDYDASLPELRGDMEQLIQAVL 284 Query: 249 NIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDIQDR 308 NIVHNAAQALA+RI GD ++ILRTRV+RQVT++K ++LALDLH+IDNGPGIP DI++R Sbjct: 285 NIVHNAAQALAERIARGDAQIILRTRVARQVTIAKRLFKLALDLHVIDNGPGIPDDIRER 344 Query: 309 IFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPL 356 IFYPLVSGR+GGSGLGLTLAQTFV QH G+IEC+SRPGCTDFRIL+PL Sbjct: 345 IFYPLVSGRDGGSGLGLTLAQTFVQQHEGLIECESRPGCTDFRILLPL 392 >ref|YP_548642.1| signal transduction histidine kinase NtrB [Polaromonas sp. JS666] gb|ABE43744.1| signal transduction histidine kinase, nitrogen specific, NtrB [Polaromonas sp. JS666] Length = 366 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 228/352 (64%), Positives = 269/352 (76%), Gaps = 5/352 (1%) Query: 6 PSLEGLDLLASAVIILDAEGGIVYANAAAENLLESSFKVLSQQKLSELFLNGKELSALFY 65 P + DLLA+ V ++ G +V+ANAA E+ L +S + + +L E F L Sbjct: 20 PRFQSFDLLATLVAVVRTNGVVVFANAALEDALGTSRRTIEGSQLPECFTEPLILQNALE 79 Query: 66 QAIEHQFADKRLDLVLERANREPLQVHTIVTPLDNPDMPVLLELRENVQQLKLDREERIF 125 A ++FA R D L R N EP+ VH +V D P ++EL QQ K DREER+ Sbjct: 80 GAGSNEFAALRYDAWLRRLNHEPMPVHVVVAQTDTPGE-AIVELLPLEQQAKQDREERLI 138 Query: 126 DQSQANKELIRNLAHEIKNPLGGIRGAAQLLELELPERHLKELREYTQVIIKEADRLQTL 185 DQ+QANKELIRNLAHEIKNPLGGIRGAAQLL++E+ KEL EYTQVII EADRLQTL Sbjct: 139 DQAQANKELIRNLAHEIKNPLGGIRGAAQLLQMEID----KELTEYTQVIIHEADRLQTL 194 Query: 186 VDRLLAPHRHPHIVGDVNIHEVCERVRSLVMAEFPQGLTIKRDYDLSIPEFRGDKEQLIQ 245 VDRLLAPHR PH+VGDVNIHEVCERVRSL++AEFP+GL + RDYD+SIP FRGD+EQLIQ Sbjct: 195 VDRLLAPHRRPHLVGDVNIHEVCERVRSLILAEFPKGLRVTRDYDISIPGFRGDREQLIQ 254 Query: 246 AVLNIVHNAAQALADRIRAGDGELILRTRVSRQVTLSKVRYRLALDLHIIDNGPGIPPDI 305 AVLNI HNAAQALA+RI AGD ++ RTR++RQVT K RYRLAL+LH+IDNGPG+P I Sbjct: 255 AVLNIAHNAAQALAERIAAGDAQITFRTRIARQVTFGKQRYRLALELHVIDNGPGVPDSI 314 Query: 306 QDRIFYPLVSGREGGSGLGLTLAQTFVHQHMGVIECDSRPGCTDFRILIPLP 357 +DRIFYPLVSGREGGSGLGLTLAQTFV QH G+IECDS PG TDF++LIPLP Sbjct: 315 KDRIFYPLVSGREGGSGLGLTLAQTFVQQHHGLIECDSVPGRTDFKLLIPLP 366