BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0072.p (579 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776516.1| methyl-accepting chemotaxis sensory transduc... 1039 0.0 ref|YP_001863552.1| methyl-accepting chemotaxis sensory transduc... 458 e-126 ref|YP_004694195.1| methyl-accepting chemotaxis sensory transduc... 384 e-104 ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herba... 372 e-100 ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I ... 371 e-100 ref|YP_004751579.1| methyl-accepting chemotaxis sensory transduc... 366 6e-99 ref|YP_314418.1| chemotaxis sensory transducer [Thiobacillus den... 363 3e-98 ref|YP_004348241.1| methyl-accepting chemotaxis sensory transduc... 363 5e-98 ref|ZP_02882824.1| methyl-accepting chemotaxis sensory transduce... 360 5e-97 ref|ZP_03269791.1| methyl-accepting chemotaxis sensory transduce... 357 3e-96 >ref|YP_003776516.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] gb|ADJ64608.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] Length = 531 Score = 1039 bits (2686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/531 (98%), Positives = 526/531 (99%) Query: 49 MLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEMRAVNLAQYRA 108 MLGFSILILFMAALGGTSLYIMGKIN QLVDVQGNWMPSVTTAQTMLAEMRAVNLAQYRA Sbjct: 1 MLGFSILILFMAALGGTSLYIMGKINAQLVDVQGNWMPSVTTAQTMLAEMRAVNLAQYRA 60 Query: 109 LTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLLARYIQIGDQL 168 LTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQ LLARYIQIGDQL Sbjct: 61 LTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQALLARYIQIGDQL 120 Query: 169 LQSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSHLTI 228 QSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSHLTI Sbjct: 121 PQSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSHLTI 180 Query: 229 IAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLELKSNDNGSLM 288 IAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLELKSNDNGSLM Sbjct: 181 IAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLELKSNDNGSLM 240 Query: 289 RSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASSMEELT 348 RSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASSMEELT Sbjct: 241 RSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASSMEELT 300 Query: 349 STVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVIEGISF 408 STVQQNAGNAKQAS MASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVIEGISF Sbjct: 301 STVQQNAGNAKQASSMASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVIEGISF 360 Query: 409 QTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIEDSVGRIRNGSQ 468 QTNILALNAAVEAARAGENGRGFAVVASEVRALAQR+SAAAKEIKDLIEDSVGRIRNGSQ Sbjct: 361 QTNILALNAAVEAARAGENGRGFAVVASEVRALAQRSSAAAKEIKDLIEDSVGRIRNGSQ 420 Query: 469 LVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNAALVEE 528 LVEAAGATIAEIMQSSVRTT LMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNAALVEE Sbjct: 421 LVEAAGATIAEIMQSSVRTTDLMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNAALVEE 480 Query: 529 AAAAAQSMMQQAQALTAAVSVFKLDDQALRTLPGMPAAPQLGRSLATPALS 579 AAAAAQSMMQQAQALTAAVSVFKLDDQALRTLPGMPAAPQLGRSLATPALS Sbjct: 481 AAAAAQSMMQQAQALTAAVSVFKLDDQALRTLPGMPAAPQLGRSLATPALS 531 >ref|YP_001863552.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] gb|ACC76502.1| methyl-accepting chemotaxis sensory transducer [Burkholderia phymatum STM815] Length = 576 Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust. Identities = 270/514 (52%), Positives = 362/514 (70%) Query: 39 IRNTKVATQLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEM 98 ++N KV +QL+LGF+ +I+ M LG L M N ++ + + NW+PSV ++ M A + Sbjct: 4 LKNLKVVSQLVLGFAAVIVLMVGLGVFCLIEMSGENARVAEFRDNWLPSVRSSLQMQAGL 63 Query: 99 RAVNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLL 158 R + +YRA ++ + +Q+A RI A L Y A+ +Y L+S P E++AY +Q L+ Sbjct: 64 RQARINEYRAASSQSPTSVQEAEARIDAGLAEYRSAAAEYEKLVSEPDEKTAYANIQTLM 123 Query: 159 ARYIQIGDQLLQSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQ 218 +Y+ + Q+ GK EA + VR A+E ++ I++IN GAA+ E Sbjct: 124 PQYVDLDRQVRVLARDGKATEAMALLTGQSSTVRDALEKDVRTIVEINVAGAAREGEAAS 183 Query: 219 ASYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLE 278 +Y+++ I F +AAA+ LG+AL I+R L RQLGGEP +A L+GQIAAGNL + Sbjct: 184 KAYSRTIALAIGFIMAAAILALGVALFIARGLARQLGGEPRDAASLAGQIAAGNLRIGVP 243 Query: 279 LKSNDNGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLE 338 LK+ D SLM SL M+DQL+ +V I+ +S SI VAA EIAQGN DLSQRTEEQAASLE Sbjct: 244 LKAGDRSSLMFSLGTMKDQLTVIVQGIKTSSESIFVAAGEIAQGNTDLSQRTEEQAASLE 303 Query: 339 ETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSD 398 ETASSM+ELT+TV+QNA NAKQA+ +A++ + +A+RG + VV TM +S SS ++++ Sbjct: 304 ETASSMQELTATVRQNADNAKQATVLATSASAIAQRGGEVVGRVVETMHGISNSSSKVTE 363 Query: 399 IISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIED 458 II VIEGI+FQTNILALNAAVEAARAGE GRGFAVVA EVR LAQR++ AAKEIK+LI + Sbjct: 364 IIGVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSATAAKEIKELIGE 423 Query: 459 SVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQV 518 S R+ GS+LVE AG TI E++QS R T +M EI++ASEEQS GI QVN A+ QMD+V Sbjct: 424 SATRVEAGSRLVEEAGGTIREVVQSVKRVTDIMGEISSASEEQSTGIEQVNQAVTQMDEV 483 Query: 519 TQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKL 552 TQQNAALVEEA+AAAQSM QQA+AL AV+VF++ Sbjct: 484 TQQNAALVEEASAAAQSMAQQARALREAVAVFQV 517 >ref|YP_004694195.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] ref|YP_004695871.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] gb|AEJ00796.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] gb|AEJ02472.1| methyl-accepting chemotaxis sensory transducer [Nitrosomonas sp. Is79A3] Length = 578 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 241/514 (46%), Positives = 333/514 (64%) Query: 39 IRNTKVATQLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEM 98 + + K+ T+L F +L+ FM LG SL+ + +N + G W+P+ A + Sbjct: 2 LNDMKIGTKLSGSFMVLLGFMIFLGVFSLFQLNSLNKAATAITGEWLPASKAAADLNLFT 61 Query: 99 RAVNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLL 158 + + + + + Q MQ I L R KASE+ + LISSP EQ +D Sbjct: 62 SDFRIGEMSHVLSTSEQDMQHYEKEIANLLSRIEKASEESKRLISSPEEQKIFDLFSERW 121 Query: 159 ARYIQIGDQLLQSVEQGKEEEAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQ 218 +Y+ QL+ K EEA M V M ++ ++ +N G A E Sbjct: 122 GQYLAAHRQLISLSRANKTEEARAFMNGQSKQVYDEMSDQLIKLSDLNTAGGIAASEVAD 181 Query: 219 ASYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLE 278 ++A S +IA A G+ +AL+I+R L QLGGEP A + +IAAG+L++ + Sbjct: 182 QTFAMSQTLVIALLAIAIAIGIVLALVITRNLLAQLGGEPKYAAEVMQKIAAGDLSSNIA 241 Query: 279 LKSNDNGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLE 338 + + S++ ++ M+D L +V +I+ + +I A+ EIA GN+DLSQRTEEQA+SLE Sbjct: 242 VNTKYPNSMLFAIKEMQDSLVKIVSEIRSGTDTISTASGEIASGNLDLSQRTEEQASSLE 301 Query: 339 ETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSD 398 ETASSMEELTSTV+QNA NA+QA+ +A+ +EVA +G A + VV TM ++ SS ++ D Sbjct: 302 ETASSMEELTSTVRQNADNARQANQLAAGASEVAVKGGAVVGQVVQTMSSINESSKKIVD 361 Query: 399 IISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIED 458 IISVI+GI+FQTNILALNAAVEAARAGE GRGFAVVA+EVR LAQR++AAAKEIK+LI D Sbjct: 362 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRTLAQRSAAAAKEIKELISD 421 Query: 459 SVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQV 518 SV ++ +G++LV+ AGAT+ EI+ + R T +M EI+AAS+EQS+GI QVN A+ QMD+V Sbjct: 422 SVSKVEDGTRLVDEAGATMDEIVSAVKRVTDIMAEISAASQEQSSGIEQVNQAVTQMDEV 481 Query: 519 TQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKL 552 TQQNAALVEEAAAAA+SM +QAQ LT AVS FKL Sbjct: 482 TQQNAALVEEAAAAAESMQEQAQTLTQAVSTFKL 515 >ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ66081.1| methyl-accepting chemotaxis protein I, serine sensor receptor protein [Herbaspirillum seropedicae SmR1] Length = 516 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 234/514 (45%), Positives = 343/514 (66%), Gaps = 7/514 (1%) Query: 41 NTKVATQLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEMRA 100 N K+A +L++ F+ +I+ LG ++ + +N D+ NW+P++ AQ++ A + Sbjct: 6 NLKIAKKLIVSFAAVIVLTVILGLFAIRELKAVNQASTDMATNWLPTIKAAQSIQASLPR 65 Query: 101 VNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLLAR 160 + +++ + +TA +DA I + L K Y IS E+ Y++ A Sbjct: 66 MRISELQMVTAATPAEREDALKAIKSRLDILAKQRAAYEAQISEAEEKVLYEKFSKSFAT 125 Query: 161 YIQIGDQLLQSVEQGKEEEAANTMK-DTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQA 219 Y++I +L + +GKEEEA K D+ R+ +E + +IIK+N G+ ++ + + Sbjct: 126 YLEIDKELARISAEGKEEEARALFKGDSNKTFRSMIE-NMDEIIKVNDAGSKRSDDMAEQ 184 Query: 220 SYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLEL 279 Y + L II A + LG+A++++R ++R L EA+ ++ ++A G+L + Sbjct: 185 VYRSATLWIIGLLAAIVVIALGLAVMVARAVSRPLN----EAVAVAERVAQGDLTMDIRA 240 Query: 280 KSND-NGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLE 338 S D G LM SL M D L +VG+++ + +I A+QEIA GN+DLS RTEEQA SLE Sbjct: 241 TSTDETGMLMHSLRAMNDSLQQIVGEVRTGTDTITTASQEIATGNLDLSSRTEEQAGSLE 300 Query: 339 ETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSD 398 ETAS+MEELT+TV+QNA NA+QA+ +A++ +++A +G A + VV TM ++ SS++++D Sbjct: 301 ETASAMEELTATVKQNADNARQANQLAASASDIATQGGAVVGQVVQTMEGITESSNRIAD 360 Query: 399 IISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIED 458 IISVI+GI+FQTNILALNAAVEAARAGE GRGFAVVASEVR+LAQR+++AAKEIK LI+D Sbjct: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLIDD 420 Query: 459 SVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQV 518 SV ++ GSQLVE AGAT++E++ S R T ++ EI+AAS EQS GI ++N AI QMD+V Sbjct: 421 SVEKVGAGSQLVERAGATMSEVVASVRRVTDVVAEISAASNEQSTGIEEINRAITQMDEV 480 Query: 519 TQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKL 552 TQQNAALVEEAAAAAQS+ QA L+ VSVFKL Sbjct: 481 TQQNAALVEEAAAAAQSLQDQAARLSQVVSVFKL 514 >ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] gb|ADJ64222.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] Length = 579 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 235/528 (44%), Positives = 355/528 (67%), Gaps = 12/528 (2%) Query: 41 NTKVATQLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEMRA 100 + +++ +L+ F +++ +AALG S+ + ++N+ ++ NW+PS+ T + M Sbjct: 6 DLRISRKLITTFLVVVAMVAALGVFSIRQLDQVNSASTEISTNWLPSIRTLARLQLAMSR 65 Query: 101 VNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLLAR 160 + + + + A +A+ ++ + + A +Y IS P E++ Y E++ L+A Sbjct: 66 LRSFELQHILAKDAKEYEEVERGMQVQMNNLKTAQAEYVTQISEPEEKAIYPEVEKLIAT 125 Query: 161 YIQIGDQLLQSVEQGKEEEAANTMK-DTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQA 219 ++ D+++ QGK+EEA N + ++ RT+++ +I ++ +N +GA + + A Sbjct: 126 FVSEHDKIIALSRQGKDEEARNLQRGESTKAYRTSLQ-QIDKLAAVNDKGADISNKQADA 184 Query: 220 SYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGNLAARLEL 279 YAQ+ L II T+AA + G+A+L++ ++R + EA+ ++ ++A G+L R+E Sbjct: 185 IYAQARLWII-VTVAACI---GLAMLLAVWVSRLIARPLEEAVSVAQRVAGGDLTTRIEP 240 Query: 280 KSND-NGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLE 338 D G L+ +L M D L G+VGQ++ + +I A+ EIA GN+DLS RTEEQA+SLE Sbjct: 241 AGKDETGQLLVALKSMNDSLVGIVGQVRMGTQTITTASTEIASGNLDLSSRTEEQASSLE 300 Query: 339 ETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSD 398 ETAS+MEELTSTV+QNA NA+QA+ +A + +EVA +G A + VV TM ++ SS +++D Sbjct: 301 ETASAMEELTSTVKQNADNARQANQLAVSASEVASQGGAVVNQVVDTMGSINASSRKIAD 360 Query: 399 IISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIED 458 II VI+GI+FQTNILALNAAVEAARAGE GRGFAVVASEVR+LAQR++ AAKEIK+LIE Sbjct: 361 IIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKELIEG 420 Query: 459 SVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQV 518 SV ++ GS+LVE AG T++E++QS R T ++ EI++AS+EQS GI QVN AI QMD+V Sbjct: 421 SVAQVDMGSKLVERAGITMSEVVQSVRRVTDIVGEISSASQEQSEGIEQVNLAIAQMDEV 480 Query: 519 TQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKLDDQALRTLPGMPAA 566 TQQNAALVEEAAAAAQS+ +QA+ LT V FKL+ Q P PA+ Sbjct: 481 TQQNAALVEEAAAAAQSLQEQAETLTQTVGFFKLEQQ-----PDEPAS 523 >ref|YP_004751579.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] gb|AEK60756.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] Length = 635 Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 233/570 (40%), Positives = 361/570 (63%), Gaps = 33/570 (5%) Query: 10 KAIHAGP----PSSTAQAASNA-------------------LCPFPSGQIVNIRNTKVAT 46 + + AGP P TAQ A N P + N K+AT Sbjct: 47 EGLEAGPAVLGPEETAQPAVNTNRKAAGQNPLSRTNGSRATETPSEKKTMTWFYNLKIAT 106 Query: 47 QLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEMRAVNLAQY 106 +L+L F+++++ LG S+ +G++N ++ NW+PSV T+ + + + + Sbjct: 107 KLLLSFALILMLTLVLGVASITQLGQVNATTNEINSNWLPSVRMLLTLKSNLALLRNVEM 166 Query: 107 RALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLLARYIQIGD 166 + + +++A M + I G K +Y L+S E++ YD+L+ + RY+++ Sbjct: 167 QHVMSNDAADMDKSAQFIGDIRGDVQKTLSEYAPLVSEE-ERAVYDQLKDKIPRYLEMDK 225 Query: 167 QLLQSVEQGKEEEAANTMK-DTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSH 225 +++ ++++A ++ D+L + ++ ++++++KIN +G+A + + G+A Y ++ Sbjct: 226 KIVDISRAFRKDDAIKEIRGDSLAAI-VELDKQVERLVKINSDGSAASAKDGEAIYNKAR 284 Query: 226 LTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGE-AMWLSGQIAAGNLAARLELKSND- 283 +I +A L G +AL I+R + +P E A+ ++ ++A G+L A +E++S+D Sbjct: 285 FWMIGLMIAMLLLGFALALWIARVV-----AQPLEFAVDVARRVAGGDLTADIEVRSSDE 339 Query: 284 NGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASS 343 G LM++L M L +VG+++ + +I A+ +IA GN +LSQRTE+QA+SLEETA+S Sbjct: 340 TGQLMQALKDMNHSLQKIVGEVRSGTDTIATASGQIAAGNQNLSQRTEQQASSLEETAAS 399 Query: 344 MEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVI 403 ME+LTSTV+QNA NA QA+ +A + +EVA G + VV+TM ++ SS ++ DII VI Sbjct: 400 MEQLTSTVKQNADNASQANQLAVSASEVALHGGTVVTQVVSTMGAINTSSKKIVDIIGVI 459 Query: 404 EGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIEDSVGRI 463 +GI+FQTNILALNAAVEAARAGE GRGFAVVA+EVR+LAQR++AAAKEIK LI+DSV ++ Sbjct: 460 DGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKGLIDDSVEKV 519 Query: 464 RNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNA 523 G++LV+ AG+T+ EI+ S R T +M EI AAS+EQ+AGI Q+N AI QMDQVTQQNA Sbjct: 520 GLGTRLVDQAGSTMEEIVASVRRVTDIMGEITAASQEQTAGIEQINQAISQMDQVTQQNA 579 Query: 524 ALVEEAAAAAQSMMQQAQALTAAVSVFKLD 553 ALVEEAAAAA S+ QA AL V FKL+ Sbjct: 580 ALVEEAAAAAASLQDQAGALAGVVGAFKLE 609 >ref|YP_314418.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] gb|AAZ96613.1| chemotaxis sensory transducer [Thiobacillus denitrificans ATCC 25259] Length = 586 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 249/557 (44%), Positives = 347/557 (62%), Gaps = 15/557 (2%) Query: 2 LLAEVRCHKAIHAGPPSSTAQAASNALC-PFPSGQIVNIRNTKVATQLMLGFSILILFMA 60 + A CH + G ++ Q A C G+ + + N K+ T+L GF ++L Sbjct: 1 MCARPDCHAS--RGCHAARLQCARWGDCASMHRGRTMTLVNMKIGTRLGTGFGAVLLLTL 58 Query: 61 ALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLAEMR--AVNLAQYRALTADNAQRMQ 118 A+ G L + +I + DV G+ M + M M+ AV + LT + A M Sbjct: 59 AVAGLGLAYLSQIQRHVDDVAGSRMGKIKLVNGMRDAMQSGAVAVRNLVLLTDEGA--MA 116 Query: 119 DARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLLARYIQIGDQLLQSVEQGKEE 178 + R A RY A+ + + SPAE S YD++ AR D++ + G Sbjct: 117 EEAQRFLAHRARYADAAAKLATAVRSPAETSVYDKIAAARARTEPALDKV-REFAMGNPL 175 Query: 179 EAANTMKDTLYPVRTAMEAKIQQIIKINQEGAAQAVEHGQASYAQSHLTIIAFTLAAALA 238 EA + + + P++ A ++++ + + GAA A+ +YA + ++ +L A + Sbjct: 176 EATRVLVEEVRPLQQQWLAALEEMAALQERGAAVAMVDAADAYANAFSILLVLSLGAVVT 235 Query: 239 GLGIALLISRRLTRQLGGEP-GEAMWLSGQIAAGNLAARLELKSNDN-GSLMRSLMIMRD 296 G G+A I+R +T EP +A+ L+ +A G+L AR E +++D G L R+L M Sbjct: 236 GAGVAWRITRSVT-----EPVRKAVALARSVAGGDLTARGESRADDEFGQLQRALTGMTA 290 Query: 297 QLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEEQAASLEETASSMEELTSTVQQNAG 356 L+G+V +++H + +I VA++EIA GN DLS RTE QA+SLEETASSMEELTSTV+QNA Sbjct: 291 SLAGIVAEVRHTTDTIAVASREIASGNADLSSRTESQASSLEETASSMEELTSTVRQNAE 350 Query: 357 NAKQASGMASAGAEVARRGEAEIADVVATMREMSVSSHQMSDIISVIEGISFQTNILALN 416 NA+QA+ + + A+VA +G + VV TM + SS ++SDII VI+GI+FQTNILALN Sbjct: 351 NARQANQLVVSTADVAVKGGEVVGQVVDTMASIKDSSRKISDIIGVIDGIAFQTNILALN 410 Query: 417 AAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEIKDLIEDSVGRIRNGSQLVEAAGAT 476 AAVEAARAGE GRGFAVVASEVR LAQR++ AAKEIK LIEDSVG++ GS+LV+ AG T Sbjct: 411 AAVEAARAGEQGRGFAVVASEVRNLAQRSAGAAKEIKSLIEDSVGKVDAGSKLVDEAGKT 470 Query: 477 IAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAIVQMDQVTQQNAALVEEAAAAAQSM 536 + EI+ S R T +M EIAAAS+EQSAGI QVN A+ QMD++TQQNAALVEEAAAAA+S+ Sbjct: 471 MDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQAVGQMDEMTQQNAALVEEAAAAAESL 530 Query: 537 MQQAQALTAAVSVFKLD 553 +QA L AVSVFKLD Sbjct: 531 QEQAAKLADAVSVFKLD 547 >ref|YP_004348241.1| methyl-accepting chemotaxis sensory transducer [Burkholderia gladioli BSR3] gb|AEA62729.1| methyl-accepting chemotaxis sensory transducer [Burkholderia gladioli BSR3] Length = 563 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 242/533 (45%), Positives = 331/533 (62%), Gaps = 27/533 (5%) Query: 39 IRNTKVATQLMLGFSILILFMAALGGTSLYIMGKINTQLVDVQGNWMPSVTTAQTMLA-E 97 ++N KV+++L++GF +L + + A+ + Y +G++N+QL + + V + LA + Sbjct: 1 MKNMKVSSRLIIGFGLLTILLLAVAAGAFYGLGQLNSQL-----DSIARVNNTEARLANQ 55 Query: 98 MRAVNLAQYRALTADN------AQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAY 151 +RA Q RA+ N Q M RIT Y A +Q + + E Sbjct: 56 LRAS--IQDRAIAVRNLALVTDPQDMAREADRITQQERIYADAYQQLSRMFTD--EAGTT 111 Query: 152 DELQVLLARYIQIGDQ------LLQSVEQGKEEEAANTMKDTL---YPVRTAMEAKIQQI 202 + + LLA Q D+ +SV+ +AA ++ L P + A+ ++ Sbjct: 112 ERERTLLAALKQ--DEAAAMPPFRKSVQLALNNDAAAATRELLQNARPPQRIWLARAVEL 169 Query: 203 IKINQEGAAQAVEHGQASYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAM 262 + QA A+Y+ I +A L +G +LI+R + RQLGGEP A Sbjct: 170 ANFEDQLNEQAQREAVATYSNVRALIAVIASSALLVAVGTTILIARSVLRQLGGEPSMAQ 229 Query: 263 WLSGQIAAGNLAARLELKSNDNGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQG 322 + + QIA GNL L + D+ SLM SL MR +L+ +V I+ ++ SI +AA E+AQG Sbjct: 230 YAAAQIADGNLMIDLPVTRGDSSSLMASLETMRAKLASIVQGIKTSAESISIAAGEVAQG 289 Query: 323 NIDLSQRTEEQAASLEETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADV 382 N+DLSQRTEEQAASLEETA+SMEELTSTV+QN NA+Q S +A+A ++ A G + V Sbjct: 290 NVDLSQRTEEQAASLEETAASMEELTSTVKQNTDNARQGSTLAAAASQTASSGGEVVRQV 349 Query: 383 VATMREMSVSSHQMSDIISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALA 442 V TM +++ SS ++S+IISVIEGI+FQTNILALNAAVEAARAGE GRGFAVVA EVR LA Sbjct: 350 VGTMADITSSSQKVSEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLA 409 Query: 443 QRTSAAAKEIKDLIEDSVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQS 502 QR++ AAKEIK LIE SV + GSQLV AGAT+ EI++S R T +M EIA+AS EQ Sbjct: 410 QRSAVAAKEIKALIETSVSHVAAGSQLVSNAGATMDEIVRSVKRVTDIMGEIASASAEQG 469 Query: 503 AGIGQVNTAIVQMDQVTQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKLDDQ 555 GI QVN A+ QMD+VTQQNAALVE+A AAAQSM QA+ L AAVS+FK++ + Sbjct: 470 TGIEQVNVAVTQMDEVTQQNAALVEQATAAAQSMADQAENLRAAVSIFKVESR 522 >ref|ZP_02882824.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] gb|EDT12027.1| methyl-accepting chemotaxis sensory transducer [Burkholderia graminis C4D1M] Length = 521 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 243/521 (46%), Positives = 335/521 (64%), Gaps = 23/521 (4%) Query: 44 VATQLMLGFSILILFMAALGGTSLYI---MGKINTQLVD--VQGNWMPSVTTAQTMLAEM 98 V +L+L F+++I F +GGTSL M I + D + G + + +++ Sbjct: 9 VFRKLLLAFAVVIAFCVVIGGTSLKTLSSMHDITDAICDKYMDGLYWLEEANRHKIDSDL 68 Query: 99 RAVNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAYDELQVLL 158 A NL Y + A Q+++D+ I A+L R + + YR I + + +D++ Sbjct: 69 AAANLG-YVSGEAGR-QKLKDS---IVASLKRMHEGYDNYRATIVTAQGRQMFDDVLQKS 123 Query: 159 ARYIQIGDQLLQSVEQGKEEEAANTMKDTLYPVRTA------MEAKIQQIIKINQEGAAQ 212 A + I Q + G A D L VR A + +I +I ++ Sbjct: 124 AVWEGIVQQQI-----GLAPIPAGVDNDEL--VRRAIASSEALRDRITALIDYRRQQGND 176 Query: 213 AVEHGQASYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQIAAGN 272 A A+Y + + ++ L A +AG +A +I+RRL RQLGGEP AM ++ +IA G+ Sbjct: 177 AQAEAAANYQRMRMAMLVLVLGAIVAGGVLAAMIARRLARQLGGEPDYAMHIANRIADGD 236 Query: 273 LAARLELKSNDNGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLSQRTEE 332 L+ R+E + D S++ +L MR++LSG+V I +S SI A+ EIAQGN DLSQRTEE Sbjct: 237 LSVRVETRPGDTQSMLFALRNMRERLSGIVAGISESSESILTASGEIAQGNTDLSQRTEE 296 Query: 333 QAASLEETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMREMSVS 392 QAA+L+ETASSM++LTSTV+QNAGNA+QA G+A +EVA RG + DVV TMRE++ Sbjct: 297 QAAALQETASSMQQLTSTVKQNAGNAQQAGGVAHGASEVAARGSHLVGDVVETMRELAAG 356 Query: 393 SHQMSDIISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSAAAKEI 452 S +M+DII+VIEGI+FQTNILALNAAVEAARAGE GRGFAVVA EVR+LAQR++ +AKEI Sbjct: 357 SKRMTDIIAVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAVSAKEI 416 Query: 453 KDLIEDSVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQVNTAI 512 K+LIE+S R+ +G++L E AG T+AE+ Q+ R T LM EI+AAS+EQS GI VN A+ Sbjct: 417 KELIENSTARVDSGAELAERAGQTMAEVTQAISRVTDLMNEISAASQEQSTGIEGVNRAV 476 Query: 513 VQMDQVTQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKLD 553 QMD VTQQNAALVE+AAAAA SM QA+ L AAV+VF L+ Sbjct: 477 AQMDDVTQQNAALVEQAAAAASSMADQARQLQAAVTVFSLE 517 >ref|ZP_03269791.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. H160] gb|EDZ98638.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. H160] Length = 581 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 251/567 (44%), Positives = 347/567 (61%), Gaps = 30/567 (5%) Query: 37 VNIRNTKVATQLMLGFSILILFMAALGGTSLYIMGKIN-----TQLVDVQGNWMPSVTTA 91 +NIRN K+ +L+ F ++ A + + MG+I+ T +D+ G + Sbjct: 1 MNIRNMKLGAKLISAFIVVSAISAVVSVVGVRTMGQISANADKTYRLDLVG-----LNLI 55 Query: 92 QTMLAEMRAVNLAQYRALTADNAQRMQDARTRITAALGRYTKASEQYRHLISSPAEQSAY 151 Q A++ V A+ A A++ D+ + AL + Q L+ + ++ + Sbjct: 56 QQANADVLRVGTYLRNAILAPTAEKRTDSLAQAEKALASAREHLNQAEPLVYTEKGKATF 115 Query: 152 DELQVLLARYIQIGDQLLQSVEQ-GKEEEAANT---MKDTLYPVRTAMEAKIQQIIKINQ 207 +L +YIQ D++ + G +++A+ T + D + + + ++ + Q Sbjct: 116 ADLDQSWNQYIQAFDEMKGRINAAGPQDQASLTDYLLNDYHHKGFKTL-VLMGTLVDVKQ 174 Query: 208 EGAAQAVEHGQASYAQSHLTIIAFTLAAALAGLGIALLISRRLTRQLGGEPGEAMWLSGQ 267 A E Y ++ ++ L G+GI + ++R LTRQLG EP A L+ Sbjct: 175 ADAQTTAESNDTVYDDGRNLMLVLVASSVLIGVGIGIWMARSLTRQLGTEPETAADLARS 234 Query: 268 IAAGNLAARLELKSNDNGSLMRSLMIMRDQLSGLVGQIQHASTSIHVAAQEIAQGNIDLS 327 +AAG+L+ R++L+ D SLM SL MRD LS +V +++ + + A+ +IAQGN+DLS Sbjct: 235 VAAGDLSVRIDLRPGDTNSLMASLKAMRDALSQVVAEVRENAEGVATASAQIAQGNLDLS 294 Query: 328 QRTEEQAASLEETASSMEELTSTVQQNAGNAKQASGMASAGAEVARRGEAEIADVVATMR 387 RTEEQAASLEETASS+EELT+ V+ N NAKQA+ +A A + VAR+G + VV TMR Sbjct: 295 SRTEEQAASLEETASSIEELTAAVRHNTDNAKQAATLAGAASGVARQGGEVVGRVVETMR 354 Query: 388 EMSVSSHQMSDIISVIEGISFQTNILALNAAVEAARAGENGRGFAVVASEVRALAQRTSA 447 E+S SS +MS+IISVIEGI+FQTNILALNAAVEAARAGE GRGFAVVA EVRALAQR+++ Sbjct: 355 EISTSSTKMSEIISVIEGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRALAQRSAS 414 Query: 448 AAKEIKDLIEDSVGRIRNGSQLVEAAGATIAEIMQSSVRTTHLMKEIAAASEEQSAGIGQ 507 AAKEIKDLI DSV R+ GS LVE AG TI EI+ S R T ++ EI++AS+EQS GI Q Sbjct: 415 AAKEIKDLIADSVDRVVAGSTLVEQAGGTINEIVTSVKRVTDIVGEISSASQEQSTGIEQ 474 Query: 508 VNTAIVQMDQVTQQNAALVEEAAAAAQSMMQQAQALTAAVSVFKLDDQAL---------- 557 VN AI QMDQVTQQNAALVEEA+AAAQSM QQAQAL AAV+ FK DD+ L Sbjct: 475 VNRAINQMDQVTQQNAALVEEASAAAQSMAQQAQALRAAVAFFKADDRQLAVSRANTRRI 534 Query: 558 ---RTLPGMPAAP--QLGRSLATPALS 579 + LP + AA L + + TP L+ Sbjct: 535 EPHQALPKIHAASPAMLTKPMTTPLLT 561