BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0040.p (246 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776487.1| chemotaxis phosphatase [Herbaspirillum serop... 494 e-138 ref|YP_001352776.1| CheZ chemotaxis protein [Janthinobacterium s... 298 6e-79 ref|YP_001099263.1| chemotaxis protein CheZ-like [Herminiimonas ... 296 2e-78 ref|ZP_08276040.1| Chemotaxis response - phosphatase CheZ [Oxalo... 285 6e-75 ref|ZP_03699452.1| chemotaxis phosphatase, CheZ [Lutiella nitrof... 201 1e-49 ref|YP_004848443.1| chemotaxis phosphatase CheZ [Pseudogulbenkia... 200 2e-49 gb|EGW59774.1| chemotaxis phosphatase, CheZ [Dechlorosoma suillu... 182 4e-44 ref|ZP_08505558.1| Chemotaxis protein CheZ [Methyloversatilis un... 181 1e-43 ref|NP_903119.1| chemotaxis regulator CheZ [Chromobacterium viol... 179 3e-43 ref|YP_932965.1| chemotaxis regulator CheZ [Azoarcus sp. BH72] >... 179 4e-43 >ref|YP_003776487.1| chemotaxis phosphatase [Herbaspirillum seropedicae SmR1] gb|ADJ64579.1| chemotaxis phosphatase protein [Herbaspirillum seropedicae SmR1] Length = 246 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 246/246 (100%), Positives = 246/246 (100%) Query: 1 MSDDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVR 60 MSDDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVR Sbjct: 1 MSDDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVR 60 Query: 61 LLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQ 120 LLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQ Sbjct: 61 LLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQ 120 Query: 121 AKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITG 180 AKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITG Sbjct: 121 AKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITG 180 Query: 181 QLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPASPGTAMGQTDVDDL 240 QLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPASPGTAMGQTDVDDL Sbjct: 181 QLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPASPGTAMGQTDVDDL 240 Query: 241 LDSLGF 246 LDSLGF Sbjct: 241 LDSLGF 246 >ref|YP_001352776.1| CheZ chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR90007.1| CheZ chemotaxis protein [Janthinobacterium sp. Marseille] Length = 263 Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 144/203 (70%), Positives = 168/203 (82%) Query: 44 EDQSDKPMYARLGGIVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKV 103 ED DKPM+ RLGGIVRLLHDS+RELGYDRSL++VAS+I DAQ RLE++ATLTEQAANKV Sbjct: 61 EDNGDKPMFERLGGIVRLLHDSLRELGYDRSLSNVASEITDAQGRLEYVATLTEQAANKV 120 Query: 104 LNALDSGMPAQDRLQEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEK 163 LNA+D GMP QD L + AKD++ RW++L+ G++S+DEFK LA DS++F+ V E TEAEK Sbjct: 121 LNAIDVGMPEQDALSKSAKDMDARWAQLFEGKLSVDEFKTLANDSRQFAGKVTEVTEAEK 180 Query: 164 ARMLEIMMAQDFQDITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMN 223 AR+LEIMMAQDFQDITGQLIKKIV IT AE ELAQLLRDNAPPEV+A KPV LMN Sbjct: 181 ARLLEIMMAQDFQDITGQLIKKIVAITHKAESELAQLLRDNAPPEVKAAHPENKPVELMN 240 Query: 224 GPASPGTAMGQTDVDDLLDSLGF 246 GP++P AM Q DVD LL LGF Sbjct: 241 GPSAPAIAMVQDDVDSLLADLGF 263 >ref|YP_001099263.1| chemotaxis protein CheZ-like [Herminiimonas arsenicoxydans] emb|CAL61136.1| putative chemotaxis phosphatase, CheZ-like [Herminiimonas arsenicoxydans] Length = 253 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 164/253 (64%), Positives = 195/253 (77%), Gaps = 7/253 (2%) Query: 1 MSDDVD-LEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAP--EDQSDKPMYARLGG 57 MS DVD +ALF+EISAQ + A A A AA ED S+KPM+ RLGG Sbjct: 1 MSGDVDDFDALFEEISAQRAETVATAAPAVTAPPAPAARAPAAEPDEDLSEKPMFERLGG 60 Query: 58 IVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRL 117 IVRLLHDS+RELGYDRSL+DVAS+I DAQ RLE++ATLTEQAANKVLNA+D GMP QD L Sbjct: 61 IVRLLHDSLRELGYDRSLSDVASEITDAQGRLEYVATLTEQAANKVLNAIDIGMPQQDAL 120 Query: 118 QEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQD 177 + AK+++ RW++L+ G++S+DEFK+LA DS++FSA V E TEAEKAR+LEIMMAQDFQD Sbjct: 121 SKTAKEMDTRWAQLFDGKLSVDEFKKLATDSRQFSAKVAEVTEAEKARLLEIMMAQDFQD 180 Query: 178 ITGQLIKKIVGITTTAERELAQLLRDNAPPEVR-AQIEAEK---PVSLMNGPASPGTAMG 233 ITGQLIKKIV IT AE ELAQLLRDNAPPE++ A+ EA+ PV LMNGP++P AM Sbjct: 181 ITGQLIKKIVTITHKAESELAQLLRDNAPPEIKAARAEAKPGDAPVQLMNGPSAPAIAMV 240 Query: 234 QTDVDDLLDSLGF 246 Q DVD LL LGF Sbjct: 241 QDDVDGLLADLGF 253 >ref|ZP_08276040.1| Chemotaxis response - phosphatase CheZ [Oxalobacteraceae bacterium IMCC9480] gb|EGF30490.1| Chemotaxis response - phosphatase CheZ [Oxalobacteraceae bacterium IMCC9480] Length = 254 Score = 285 bits (728), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 152/256 (59%), Positives = 183/256 (71%), Gaps = 12/256 (4%) Query: 1 MSDDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQ----------SDKP 50 MSDD D ALF+E++AQ + EA A A+ + ++Q SD P Sbjct: 1 MSDDFD--ALFEEVAAQRTATLADPEPEATTAPATTGAKISQEQEQPEHDATQSRTSDNP 58 Query: 51 MYARLGGIVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSG 110 M+ RLGGIVRLLHDS+RELGYDR+L+ SQI DAQ RLE+IATLTEQAANKVLN +D G Sbjct: 59 MFERLGGIVRLLHDSLRELGYDRTLHVATSQITDAQDRLEYIATLTEQAANKVLNTIDEG 118 Query: 111 MPAQDRLQEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIM 170 MPAQD L +QA+D++ RW++LY G++S+DEFK LA DS+ F+ V+ +T+ EKAR+LEIM Sbjct: 119 MPAQDALAKQARDMDSRWTQLYDGKLSVDEFKVLAADSRSFAGTVLTNTDTEKARLLEIM 178 Query: 171 MAQDFQDITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPASPGT 230 MAQDFQDITGQLIKKIV IT E ELAQLLRDNAPPE+ + EK LM GPA G Sbjct: 179 MAQDFQDITGQLIKKIVVITQKVEIELAQLLRDNAPPELLKERREEKESDLMQGPAIVGV 238 Query: 231 AMGQTDVDDLLDSLGF 246 AM Q DVD LLD LGF Sbjct: 239 AMQQDDVDSLLDGLGF 254 >ref|ZP_03699452.1| chemotaxis phosphatase, CheZ [Lutiella nitroferrum 2002] gb|EEG07632.1| chemotaxis phosphatase, CheZ [Lutiella nitroferrum 2002] Length = 249 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 108/249 (43%), Positives = 160/249 (64%), Gaps = 14/249 (5%) Query: 3 DDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVRLL 62 D DLEALFD I+ Q G +A AD A + + + S MY ++G + R L Sbjct: 10 DTPDLEALFDSIAQQH-----QAGTPQIASEADSATASTSAAEGSPSVMYEQIGQLTRKL 64 Query: 63 HDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQAK 122 H ++R++GYD+SL VA+ I DA+ RL +I+TLTE AA +VLNA D P QD L+ AK Sbjct: 65 HSALRDMGYDKSLERVANAIPDARDRLSYISTLTESAAERVLNATDIAKPIQDELESNAK 124 Query: 123 DINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITGQL 182 +++RW+RL+A +S+DEF+QL+ D+ ++ +V E T+A A++L+I+MAQDFQD+TGQ+ Sbjct: 125 QLSERWNRLFANMLSVDEFRQLSQDTHRYLQSVPEQTQATSAQLLDIVMAQDFQDLTGQV 184 Query: 183 IKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPA-SP----GTAMGQTDV 237 IKK++G+ T E +L L + +P E + +I+ +L+NGP +P Q V Sbjct: 185 IKKMMGMVKTIETDLVAFLIEFSPEEKKTEIDP----TLLNGPVINPEGRSDVVTNQQQV 240 Query: 238 DDLLDSLGF 246 DDLL+SLGF Sbjct: 241 DDLLESLGF 249 >ref|YP_004848443.1| chemotaxis phosphatase CheZ [Pseudogulbenkiania sp. NH8B] dbj|BAK78029.1| chemotaxis phosphatase CheZ [Pseudogulbenkiania sp. NH8B] Length = 249 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 107/249 (42%), Positives = 160/249 (64%), Gaps = 14/249 (5%) Query: 3 DDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVRLL 62 D DLEALFD I+ Q G +A AD A + + + + MY ++G + R L Sbjct: 10 DTPDLEALFDSIAKQH-----QAGTPQIASEADSATASTSAAEGTPSVMYEQIGQLTRKL 64 Query: 63 HDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQAK 122 H ++R++GYD+SL VA+ I DA+ RL +I+TLTE AA +VLNA D P QD L+ AK Sbjct: 65 HSALRDMGYDKSLERVANAIPDARDRLSYISTLTESAAERVLNATDIAKPIQDELESSAK 124 Query: 123 DINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITGQL 182 +++RW+RL+A +S+DEF+QL+ D+ ++ +V E T+A A++L+I+MAQDFQD+TGQ+ Sbjct: 125 QLSERWNRLFANMLSVDEFRQLSQDTHRYLQSVPEQTQATSAQLLDIVMAQDFQDLTGQV 184 Query: 183 IKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPA-SP----GTAMGQTDV 237 IKK++G+ T E +L L + +P E + +I+ +L+NGP +P Q V Sbjct: 185 IKKMMGMVKTIETDLVAFLIEFSPEEKKTEIDP----TLLNGPVINPEGRSDVVTNQQQV 240 Query: 238 DDLLDSLGF 246 DDLL+SLGF Sbjct: 241 DDLLESLGF 249 >gb|EGW59774.1| chemotaxis phosphatase, CheZ [Dechlorosoma suillum PS] Length = 288 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 111/255 (43%), Positives = 153/255 (60%), Gaps = 22/255 (8%) Query: 2 SDDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVRL 61 +D DL+ALFD ++A P + E + A DG EA D+ D+ ++ R+G + R Sbjct: 46 NDSDDLQALFDSVAATVAP-VAEPAVEVIPAAEDGEGEATG--DERDR-VFKRIGHMARQ 101 Query: 62 LHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQA 121 LHD++ ELGYD+ L I DA RL ++A LTEQAA +VLNA D P QD L+ + Sbjct: 102 LHDTLHELGYDKLLEKTVHAIPDATDRLAYVANLTEQAACRVLNATDIAKPLQDELETSS 161 Query: 122 KDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKA-----RMLEIMMAQDFQ 176 + + RW +LYA Q+S++EFKQLA +++ F + T +KA ++LEIMMAQDFQ Sbjct: 162 RALGARWDKLYANQLSVEEFKQLAAETRAF----LRDTAPQKAAATNDQLLEIMMAQDFQ 217 Query: 177 DITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGP--ASPG---TA 231 D+TGQ+IKK+V + E +L Q+L D P R E SL+NGP +S G Sbjct: 218 DLTGQVIKKVVVLAQDLENQLVQVLVDVIPDARR----NENVNSLLNGPVISSEGRTDVV 273 Query: 232 MGQTDVDDLLDSLGF 246 + Q VDDLLDSLGF Sbjct: 274 VNQQQVDDLLDSLGF 288 >ref|ZP_08505558.1| Chemotaxis protein CheZ [Methyloversatilis universalis FAM5] gb|EGK71234.1| Chemotaxis protein CheZ [Methyloversatilis universalis FAM5] Length = 274 Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/268 (40%), Positives = 158/268 (58%), Gaps = 28/268 (10%) Query: 3 DDVDLEALFDEISAQTL----------PAMTATGE----EAVAQAADGAAEAAAPE---- 44 D DL+ALFD I+ +T P +TA G+ EA+ G A E Sbjct: 11 DSDDLQALFDSIANETPQKVRLEVVPEPVLTAGGDTPDLEALFDTVAGEYAATHVESHED 70 Query: 45 -DQSDKPMYARLGGIVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKV 103 D S + ++ ++G + R LHD++RELGYD +L DVA Q+ DA+SRL ++A +TE AA++V Sbjct: 71 SDHSCEMVFNKVGHLARQLHDTLRELGYDHALEDVAQQMPDARSRLNYVAQMTENAASRV 130 Query: 104 LNALDSGMPAQDRLQEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEK 163 LNA D +P QD +++++ ++DRW +LY ++S++EFK LA +++ F V + Sbjct: 131 LNATDVAIPMQDDIEKRSSLLHDRWEKLYRNELSVEEFKALATETRGFLGDVPGFARDTR 190 Query: 164 ARMLEIMMAQDFQDITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMN 223 A++ EIMMAQDFQD+TGQ+IKKIV ++ E L Q+L + P E RA P L+N Sbjct: 191 AQLNEIMMAQDFQDLTGQVIKKIVEMSQKLESGLLQVLIEAMPAEKRAAT----PEGLLN 246 Query: 224 GPASPG-----TAMGQTDVDDLLDSLGF 246 GP Q VDDLL+SLGF Sbjct: 247 GPVINAEGRNDVVTSQEQVDDLLESLGF 274 >ref|NP_903119.1| chemotaxis regulator CheZ [Chromobacterium violaceum ATCC 12472] gb|AAQ61110.1| chemotaxis protein CheZ [Chromobacterium violaceum ATCC 12472] Length = 207 Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 89/201 (44%), Positives = 133/201 (66%), Gaps = 9/201 (4%) Query: 51 MYARLGGIVRLLHDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSG 110 MY +G + R +HD++R+LGYD+SL VA I DA+ RL +IATLTE +A +VLNA D Sbjct: 11 MYEHIGQMTRKMHDALRDLGYDKSLEKVAETIPDAKDRLAYIATLTENSAERVLNATDIA 70 Query: 111 MPAQDRLQEQAKDINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIM 170 P QD+L+ QA+ +++RW +LYA +S++EFK+LA +++++ V T+A ++LEI+ Sbjct: 71 KPFQDKLESQAQALSERWEKLYANLLSVEEFKRLAEETRQYLKDVPNQTQATNTQLLEIV 130 Query: 171 MAQDFQDITGQLIKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGPA---- 226 MAQDFQD+TGQ+IKK++G+ E EL L + +P + + ++ SL+NGP Sbjct: 131 MAQDFQDLTGQVIKKMMGMVKILETELVNFLIEFSPDDKKGELNT----SLLNGPVINPE 186 Query: 227 -SPGTAMGQTDVDDLLDSLGF 246 Q VDDLL+SLGF Sbjct: 187 GKTDVVTSQQQVDDLLESLGF 207 >ref|YP_932965.1| chemotaxis regulator CheZ [Azoarcus sp. BH72] emb|CAL94078.1| chemotaxis protein CheZ [Azoarcus sp. BH72] Length = 297 Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 108/251 (43%), Positives = 159/251 (63%), Gaps = 16/251 (6%) Query: 3 DDVDLEALFDEISAQTLPAMTATGEEAVAQAADGAAEAAAPEDQSDKPMYARLGGIVRLL 62 D+ +L+ALFD ++A+ A A A A E+ S ++ RLG + R + Sbjct: 56 DNDELQALFDAVAAEFSEPAPTPAAPQPAVVP---AAAPAAEEHSCDVVFTRLGKLTRQV 112 Query: 63 HDSMRELGYDRSLNDVASQIGDAQSRLEHIATLTEQAANKVLNALDSGMPAQDRLQEQAK 122 HD + ELG+D++L +VA I DA+ RL +IA +TEQAA++VLNA D P QD+++ +A+ Sbjct: 113 HDMLGELGFDQALQEVAEAIPDARQRLNYIAQMTEQAASRVLNATDIAQPLQDQVESEAE 172 Query: 123 DINDRWSRLYAGQMSIDEFKQLAGDSQKFSAAVVESTEAEKARMLEIMMAQDFQDITGQL 182 + RW +L+A Q+S+DEFKQLA +++ F +++ A A++LEIMMAQDFQD+TGQ+ Sbjct: 173 ALQARWDKLFAQQLSVDEFKQLALETRGFLGTAAQNSRATNAQLLEIMMAQDFQDLTGQV 232 Query: 183 IKKIVGITTTAERELAQLLRDNAPPEVRAQIEAEKPVSLMNGP--ASPG-----TAMGQT 235 IK++V + T E +L Q+L + P E R +K LMNGP +S G T+ GQ Sbjct: 233 IKRVVDMAQTLETQLLQVLLEVTPAEKR----NDKHSGLMNGPVISSEGRDDVVTSQGQ- 287 Query: 236 DVDDLLDSLGF 246 VDDLL+SLGF Sbjct: 288 -VDDLLESLGF 297