BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0031.p (357 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776478.1| sugar ABC transporter ATPase [Herbaspirillum... 640 0.0 gb|EFV84756.1| sugar ABC transporter [Achromobacter xylosoxidans... 436 e-120 ref|YP_003976211.1| sn-glycerol-3-phosphate import ATP-binding p... 435 e-120 gb|EGP46438.1| sn-glycerol-3-phosphate import ATP-binding protei... 434 e-119 ref|ZP_06685254.1| ABC superfamily ATP binding cassette transpor... 429 e-118 ref|YP_004418223.1| putative sugar ABC transporter, ATP-binding ... 427 e-117 ref|YP_001628677.1| putative sugar ABC transporter, ATP-binding ... 424 e-117 ref|NP_879024.1| sugar ABC transporter, ATP-binding protein [Bor... 403 e-110 ref|NP_886474.1| sugar ABC transporter, ATP-binding protein [Bor... 401 e-110 ref|YP_012371.1| ABC transporter ATP-binding protein [Desulfovib... 400 e-109 >ref|YP_003776478.1| sugar ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ64570.1| ABC-type sugar transport systems, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 349 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/356 (89%), Positives = 332/356 (93%), Gaps = 8/356 (2%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI Sbjct: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 HIGGRDVTQLPPAQRKISMVFQS+ALFPHLSVRDNILFGVRVRKEPRAGYETRL+RVADI Sbjct: 61 HIGGRDVTQLPPAQRKISMVFQSYALFPHLSVRDNILFGVRVRKEPRAGYETRLKRVADI 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ Sbjct: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN Sbjct: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGSNVVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGAD 300 LLPL+ H GL I+GS+V+LR+L QTP QLGLRPEHIRLADAS+++ PA+VETVEYFGAD Sbjct: 241 LLPLEPHAEGLVISGSDVILRDLGQTPWQLGLRPEHIRLADASDSSVPAVVETVEYFGAD 300 Query: 301 AIIGARIGSASLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQQSGLRR 356 IIGARIG+ASL VR PGQHR AG+ + LAWDARDQYFFD SGLRR Sbjct: 301 TIIGARIGAASLLVR--------APGQHRLGAGDPVRLAWDARDQYFFDPASGLRR 348 >gb|EFV84756.1| sugar ABC transporter [Achromobacter xylosoxidans C54] Length = 351 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 232/364 (63%), Positives = 275/364 (75%), Gaps = 29/364 (7%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M++I L + K +G A A+ + F V AG FTVLLGPSGCGKSTTLR+IAGLD P+SG+I Sbjct: 1 MSSIVLDNLTKQYGGAAAIHGVSFTVPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGTI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVTQLPPA+R+ISMVFQS+ALFPHLSVR+NILFG++VRKEP Y+ RLQRVA + Sbjct: 61 RIGDRDVTQLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRKEPARDYDRRLQRVASL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL HLL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR EMRREIRALQ Sbjct: 121 LGLGHLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q L +TMVYVTHDQTEAMSMADQV+LLR G+IEQ P LYA+PA+ FAARFIGTPPMN Sbjct: 181 QDLGITMVYVTHDQTEAMSMADQVVLLRGGQIEQHDTPDGLYARPASEFAARFIGTPPMN 240 Query: 241 ---LLPLQ-----AHTHGLAIAGSNVVLRELDQTPQQLGLRPEHIRL-ADASEATAPALV 291 L+PLQ A THG AIAG+ + +LG+RPEHIR+ +D AT V Sbjct: 241 LIKLMPLQGATVIAGTHGPAIAGA-------PEGAAKLGVRPEHIRIDSDGIAAT----V 289 Query: 292 ETVEYFGADAIIGARIG-SASLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQ 350 E+VEYFGAD+I+ RIG S + VR G R AGEA+ L+W A Q+FF Sbjct: 290 ESVEYFGADSIVVCRIGDSGGIAVR--------VGGHLRARAGEALRLSWPAEQQHFFAA 341 Query: 351 QSGL 354 S + Sbjct: 342 DSAV 345 >ref|YP_003976211.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 [Achromobacter xylosoxidans A8] gb|ADP13496.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 [Achromobacter xylosoxidans A8] Length = 351 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 224/356 (62%), Positives = 269/356 (75%), Gaps = 13/356 (3%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M++I L + K +G A A+ + F V AG FTVLLGPSGCGKSTTLR+IAGLD P+SG+I Sbjct: 1 MSSIVLDNLTKQYGNAAAIHGVSFTVPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGTI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 HIG RDVTQLPPA+R+ISMVFQS+ALFPHLSVR+NILFG++VRKEP Y+ RLQRVAD+ Sbjct: 61 HIGDRDVTQLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRKEPARDYDRRLQRVADL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL+HLL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR EMRREIRALQ Sbjct: 121 LGLSHLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q L +TMVYVTHDQTEAMSMADQV+LLR G+IEQ P LYA+PAT FAARFIGTPPMN Sbjct: 181 QDLGITMVYVTHDQTEAMSMADQVVLLRGGKIEQHDTPDALYARPATEFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGSN-VVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGA 299 L+ L + IAG++ + +LG+RPEHIR+ A A VE+VEYFGA Sbjct: 241 LIGLASLQGATVIAGTHGPAIAGAPAGAMKLGVRPEHIRIDPNGIA---AKVESVEYFGA 297 Query: 300 DAIIGARIGSAS-LPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQQSGL 354 D+I+ R+G S + VR G R AGE + L+W Q+FF S + Sbjct: 298 DSIVVCRVGDTSGVAVR--------VGGHLRASAGETLGLSWQDGQQHFFAADSAV 345 >gb|EGP46438.1| sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 [Achromobacter xylosoxidans AXX-A] Length = 351 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 231/363 (63%), Positives = 272/363 (74%), Gaps = 27/363 (7%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M++I L + K +G A A+ + F V AG FTVLLGPSGCGKSTTLR+IAGLD P+SG+I Sbjct: 1 MSSIVLDNLTKQYGGAAAIHGVSFTVPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGTI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVTQLPPA+R+ISMVFQS+ALFPHLSVR+NILFG+RVR+EP Y+ RLQRVA + Sbjct: 61 RIGDRDVTQLPPAKRRISMVFQSYALFPHLSVRENILFGLRVRREPARDYDRRLQRVASL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL HLL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR EMRREIRALQ Sbjct: 121 LGLVHLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPM- 239 Q L +TMVYVTHDQTEAMSMADQV+LLR G+IEQ P LYA+PA+ FAARFIGTPPM Sbjct: 181 QDLGITMVYVTHDQTEAMSMADQVVLLRGGQIEQHDTPDGLYARPASEFAARFIGTPPMN 240 Query: 240 --NLLPLQ-----AHTHGLAIAGSNVVLRELDQTPQQLGLRPEHIRLADASEATAPALVE 292 NL+PLQ A THG AIAG+ Q +LG+RPEHIR+ PA VE Sbjct: 241 LINLMPLQGATVIAGTHGPAIAGA-------PQGAAKLGVRPEHIRIDGDG---FPATVE 290 Query: 293 TVEYFGADAIIGARIG-SASLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQQ 351 +VEYFGAD+I+ RIG S + VR G R AGEA+ L+W Q+FF Sbjct: 291 SVEYFGADSIVVCRIGDSGGVAVR--------VGGHLRARAGEALRLSWPDEQQHFFAAD 342 Query: 352 SGL 354 S + Sbjct: 343 SAV 345 >ref|ZP_06685254.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF77871.1| ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 351 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 225/356 (63%), Positives = 270/356 (75%), Gaps = 13/356 (3%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M++I L + K +G A A+ + F V AG FTVLLGPSGCGKSTTLR+IAGLD P+SG+I Sbjct: 1 MSSIVLDNLTKQYGSAAAIHGVSFTVPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGTI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVTQLPPA+R+ISMVFQS+ALFPHLSVR+NILFG++VRKEP +E RLQRVA + Sbjct: 61 RIGERDVTQLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRKEPARDFERRLQRVASL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL HLL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR EMRREIRALQ Sbjct: 121 LGLGHLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q L +TMVYVTHDQTEAMSMADQV+LLR G+IEQ P LYA+PA+ FAARFIGTPPMN Sbjct: 181 QDLGITMVYVTHDQTEAMSMADQVVLLRGGQIEQHDTPDGLYARPASEFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGS-NVVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGA 299 L+ L A + IAG+ V+ +LG+RPEHIR+ A PA+VE+VEYFGA Sbjct: 241 LIGLAAASGAAVIAGTQGPVIANAPAGAVKLGVRPEHIRI---DSAGIPAIVESVEYFGA 297 Query: 300 DAIIGARIGSAS-LPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQQSGL 354 D+I+ R+G S + VR G R AGEA+ L+W Q+FF S + Sbjct: 298 DSIVVCRVGDTSGVAVR--------VGGHLRARAGEALGLSWQDGQQHFFAADSAV 345 >ref|YP_004418223.1| putative sugar ABC transporter, ATP-binding protein [Pusillimonas sp. T7-7] gb|AEC21599.1| putative sugar ABC transporter, ATP-binding protein [Pusillimonas sp. T7-7] Length = 354 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 223/351 (63%), Positives = 268/351 (76%), Gaps = 13/351 (3%) Query: 1 MAAISLQGVCKHWGEAQ-AVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGS 59 M+ ISL + K +G A AV I FEV+AG FTVLLGPSGCGKSTTLR+IAGLD PSSG Sbjct: 1 MSTISLDNITKQYGNAPPAVNQIGFEVQAGTFTVLLGPSGCGKSTTLRMIAGLDTPSSGR 60 Query: 60 IHIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVAD 119 I IGGRDVT LPPAQRKI+MVFQS+ALFPHLSVR+NILFG+RVRKEP A Y+ RL +VA Sbjct: 61 IRIGGRDVTDLPPAQRKIAMVFQSYALFPHLSVRENILFGLRVRKEPAAQYKPRLAKVAA 120 Query: 120 ILGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRAL 179 +LGL LL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR EMRREIRAL Sbjct: 121 LLGLEQLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHEMRREIRAL 180 Query: 180 QQQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPM 239 QQ L +TMVYVTHDQTEAMSMADQV+L+ GRIEQ+ +P LY +PAT F+ARFIGTPPM Sbjct: 181 QQSLGITMVYVTHDQTEAMSMADQVVLMNGGRIEQNDSPDQLYGKPATEFSARFIGTPPM 240 Query: 240 NLLPLQAHTHGLAIAGSNVVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGA 299 N+L L T L + G+ + + LG+RPEHI+L +++ PA VE+VEYFGA Sbjct: 241 NVLRLDDETRVL-VTGTAQLGAHVPGDAAALGIRPEHIQL--SADDGIPASVESVEYFGA 297 Query: 300 DAIIGARIGSA-SLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFD 349 D+II A++G+ + VR G R G++I L W + Q+FFD Sbjct: 298 DSIIIAKLGNNPGVAVR--------AAGHLRAAHGDSIKLRWSTQQQHFFD 340 >ref|YP_001628677.1| putative sugar ABC transporter, ATP-binding protein [Bordetella petrii DSM 12804] emb|CAP40406.1| Putative sugar ABC transporter, ATP-binding protein [Bordetella petrii] Length = 357 Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust. Identities = 222/351 (63%), Positives = 267/351 (76%), Gaps = 15/351 (4%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M+ + L+ + K +GEA A++ + F AG FTVLLGPSGCGKSTTLR+IAGLD P+SG I Sbjct: 1 MSTLILEDLTKQYGEAAAIQGVGFTAPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGRI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVT LPP+QR+ISMVFQS+ALFPHLSVR+NILFG++VRKEP A Y RLQRVAD+ Sbjct: 61 RIGDRDVTHLPPSQRRISMVFQSYALFPHLSVRENILFGLKVRKEPAADYPRRLQRVADL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL+ LL+R+P+QLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR +MRREIRALQ Sbjct: 121 LGLSPLLDRKPSQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHDMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q L +TMVYVTHDQTEAMSMADQV+LLR GRIEQ P LYA+PAT FAARFIGTPPMN Sbjct: 181 QALGITMVYVTHDQTEAMSMADQVVLLRNGRIEQLDTPDGLYARPATEFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAG-SNVVLRELDQTPQQLGLRPEHIRL-ADASEATAPALVETVEYFG 298 L+ L A I G + + +LG+RPEHIR+ AD PA VE+VEYFG Sbjct: 241 LIGLAAQDGAHVIDGLAGAPVAHAPSGAARLGVRPEHIRIDADGR----PATVESVEYFG 296 Query: 299 ADAIIGARIGSAS-LPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFF 348 AD+I+ R+G++S + VR G R AG+A+ L+W Q+FF Sbjct: 297 ADSIVVCRLGNSSGVAVR--------VAGHLRAAAGDALGLSWQPEHQHFF 339 >ref|NP_879024.1| sugar ABC transporter, ATP-binding protein [Bordetella pertussis Tohama I] emb|CAE40502.1| sugar ABC transporter, ATP-binding protein [Bordetella pertussis Tohama I] gb|AEE65628.1| sugar ABC transporter, ATP-binding protein [Bordetella pertussis CS] Length = 346 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 220/350 (62%), Positives = 259/350 (74%), Gaps = 13/350 (3%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M+ + L + K +GEA A+ + F AG FTVLLGPSGCGKSTTLR+IAGLD P+SG I Sbjct: 1 MSHLVLDDLTKQYGEAAAISGVSFTAPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGRI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVT LPPA+R+ISMVFQS+ALFPHLSVR+NILFG++VRKEP YE RL RVA + Sbjct: 61 RIGDRDVTDLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRKEPARDYERRLARVAGL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL LL+R+PAQLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR +MRREIRALQ Sbjct: 121 LGLQALLDRKPAQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHDMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q+L +TMVYVTHDQTEAMSMADQV+L+R GRIEQ P LYA+PAT FAARFIGTPPMN Sbjct: 181 QELGITMVYVTHDQTEAMSMADQVVLMRGGRIEQLDTPDGLYARPATEFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGS-NVVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGA 299 L+ L H +AG+ L LGLRPEHIR+ DA PA++E+VEYFGA Sbjct: 241 LIALDTHDGRPVVAGTQGPALANAPAGAVTLGLRPEHIRI-DAD--GMPAVIESVEYFGA 297 Query: 300 DAIIGARIGSA-SLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFF 348 D++ R+GS + VR G R G A+ LAW Q+FF Sbjct: 298 DSVAVCRLGSCGGVAVRVN--------GHLRSAPGTAVGLAWPDERQHFF 339 >ref|NP_886474.1| sugar ABC transporter, ATP-binding protein [Bordetella parapertussis 12822] emb|CAE39625.1| sugar ABC transporter, ATP-binding protein [Bordetella parapertussis] Length = 346 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 219/350 (62%), Positives = 258/350 (73%), Gaps = 13/350 (3%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M+ + L + K +GEA A+ + F AG FTVLLGPSGCGKSTTLR+IAGLD P+SG I Sbjct: 1 MSHLVLDDLTKQYGEAAAISGVSFTAPAGSFTVLLGPSGCGKSTTLRMIAGLDTPTSGRI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IG RDVT LPPA+R+ISMVFQS+ALFPHLSVR+NILFG++VRKEP YE RL RVA + Sbjct: 61 RIGDRDVTDLPPAKRRISMVFQSYALFPHLSVRENILFGLKVRKEPARDYERRLARVAGL 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL LL+R+PAQLSGGQQQRVALGRA+I++APVCLMDEPLSNLDAQLR +MRREIRALQ Sbjct: 121 LGLQALLDRKPAQLSGGQQQRVALGRAVISEAPVCLMDEPLSNLDAQLRHDMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q+L +TMVYVTHDQTEAMSMADQV+L+R GRIEQ P LYA+PAT FAARFIGTPPMN Sbjct: 181 QELGITMVYVTHDQTEAMSMADQVVLMRGGRIEQLDTPDGLYARPATEFAARFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGS-NVVLRELDQTPQQLGLRPEHIRLADASEATAPALVETVEYFGA 299 L+ L H +AG+ L LGLRPEHIR+ DA PA++E+VEYFGA Sbjct: 241 LIALDTHDSRPVVAGTQGPALANAPAGAATLGLRPEHIRI-DAD--GMPAVIESVEYFGA 297 Query: 300 DAIIGARIGSA-SLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFF 348 D++ R+GS + VR G R G + LAW Q+FF Sbjct: 298 DSVAVCRLGSCGGVAVRVN--------GHLRSAPGTTVCLAWPDERQHFF 339 >ref|YP_012371.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gb|AAS97631.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gb|ADP88060.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1] Length = 349 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 209/362 (57%), Positives = 258/362 (71%), Gaps = 20/362 (5%) Query: 1 MAAISLQGVCKHWGEAQAVRNIDFEVKAGQFTVLLGPSGCGKSTTLRLIAGLDKPSSGSI 60 M+ I L V +HWG+ +AV ++ FEV+ G VLLGPSGCGKSTTLRLIAGL+ +SG I Sbjct: 1 MSTIVLDKVSRHWGDVRAVDDVSFEVEQGDMLVLLGPSGCGKSTTLRLIAGLESVTSGRI 60 Query: 61 HIGGRDVTQLPPAQRKISMVFQSFALFPHLSVRDNILFGVRVRKEPRAGYETRLQRVADI 120 IGGRDVT LPPAQR+++MVFQS+ALFPHL+VRDNILFG+ VRK P A + RL R +I Sbjct: 61 LIGGRDVTNLPPAQRQLAMVFQSYALFPHLTVRDNILFGLVVRKVPAAERQKRLDRAVEI 120 Query: 121 LGLAHLLERRPAQLSGGQQQRVALGRAIIADAPVCLMDEPLSNLDAQLRQEMRREIRALQ 180 LGL LLER+P +LSGGQQQRVALGRA++A+A VCLMDEPLSNLDA+LRQEMRREIRALQ Sbjct: 121 LGLGKLLERKPGELSGGQQQRVALGRALVAEAAVCLMDEPLSNLDAKLRQEMRREIRALQ 180 Query: 181 QQLNMTMVYVTHDQTEAMSMADQVILLREGRIEQDAAPADLYAQPATAFAARFIGTPPMN 240 Q L MTMVYVTHDQTEAMSMAD++IL++ GRI Q+A P ++Y++PATAFA FIGTPPMN Sbjct: 181 QTLGMTMVYVTHDQTEAMSMADRIILMQGGRIVQNATPTEMYSRPATAFAGSFIGTPPMN 240 Query: 241 LLPLQAHTHGLAIAGSNVVLRELDQTPQ-----QLGLRPEHIRLADASEATAPALVETVE 295 L+ LQ + G+ +AGS R T LG+RPEHIR+ D A+VE+VE Sbjct: 241 LVRLQGNDDGIRVAGS----RSGRVTCHAGADCMLGIRPEHIRIVDDG---WRAVVESVE 293 Query: 296 YFGADAIIGARIGSASLPVRRRRSDPPGXPGQHRFDAGEAIHLAWDARDQYFFDQQSGLR 355 Y G+++++ R+GS L V G G I+L + FD +G R Sbjct: 294 YLGSNSVLSCRVGSEELSVV--------VHGVTDTVVGAEIYLHCPEEHVHIFDAATGAR 345 Query: 356 RA 357 A Sbjct: 346 HA 347