BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0008.p (161 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776457.1| transcription regulator protein [Herbaspiril... 318 2e-85 ref|ZP_06638144.1| MarR family transcriptional regulator [Serrat... 171 3e-41 ref|YP_585760.1| Organic hydroperoxide resistance transcriptiona... 171 5e-41 ref|YP_003518413.1| OhrR [Pantoea ananatis LMG 20103] >gi|291150... 170 8e-41 ref|YP_001796605.1| organic hydroperoxide resistance transcripti... 169 1e-40 ref|YP_004751576.1| organic hydroperoxide resistance transcripti... 167 3e-40 ref|ZP_06192469.1| transcriptional regulatory protein [Serratia ... 167 4e-40 ref|YP_001476367.1| MarR family transcriptional regulator [Serra... 167 5e-40 ref|YP_004680361.1| MarR family transcriptional regulator [Cupri... 167 7e-40 ref|YP_004620598.1| transcriptional regulator OhrR [Ramlibacter ... 166 1e-39 >ref|YP_003776457.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64549.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 158 Score = 318 bits (815), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 4 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW 63 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW Sbjct: 1 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW 60 Query: 64 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK 123 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK Sbjct: 61 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK 120 Query: 124 AKTVPLQMSCMLPSLDQVKNLVVELKQVRKGLQDAEDK 161 AKTVPLQMSCMLPSLDQVKNLVVELKQVRKGLQDAEDK Sbjct: 121 AKTVPLQMSCMLPSLDQVKNLVVELKQVRKGLQDAEDK 158 >ref|ZP_06638144.1| MarR family transcriptional regulator [Serratia odorifera DSM 4582] gb|EFE96886.1| MarR family transcriptional regulator [Serratia odorifera DSM 4582] Length = 153 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 87/152 (57%), Positives = 114/152 (75%), Gaps = 6/152 (3%) Query: 5 DNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWE 64 DN PL + + LLD Q+CFA+YSA+LA+ K Y+KLL PLD+TYPQYLVM+VLWE Sbjct: 3 DNHYDPLKAKNM-----LLDQQMCFALYSANLALHKVYRKLLNPLDLTYPQYLVMLVLWE 57 Query: 65 KDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKA 124 +D++TVS++G RLFLDS TLTPLLKR+EA GLL R R DER+V+++LT AGRALREKA Sbjct: 58 RDEITVSDIGERLFLDSATLTPLLKRLEAAGLLLRYRAVNDERQVIIALTDAGRALREKA 117 Query: 125 KTVPLQMSCMLP-SLDQVKNLVVELKQVRKGL 155 VP + C SLD+V ++ +L+++R L Sbjct: 118 HAVPEAVMCATDCSLDEVSSIKQQLEKLRNRL 149 >ref|YP_585760.1| Organic hydroperoxide resistance transcriptional regulator, MarR-family [Cupriavidus metallidurans CH34] gb|ABF10491.1| Organic hydroperoxide resistance transcriptional regulator, MarR-family [Cupriavidus metallidurans CH34] Length = 162 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 89/156 (57%), Positives = 112/156 (71%), Gaps = 1/156 (0%) Query: 4 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW 63 M +T P TE + LLLD QLCFA+YS SLAMTK YK LL+ L +TYPQYLVM+VLW Sbjct: 3 MRDTTTPSRTEASSNDWLLLDQQLCFALYSTSLAMTKIYKPLLSELGLTYPQYLVMLVLW 62 Query: 64 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK 123 E + +TVSELG RL LDSGTLTPLLKR+E+ GL+ R RDA+DERRVLV+LT AGR LR Sbjct: 63 ESNTLTVSELGTRLTLDSGTLTPLLKRLESAGLVARERDAKDERRVLVNLTDAGRRLRAS 122 Query: 124 AKTVPLQMSCMLP-SLDQVKNLVVELKQVRKGLQDA 158 A +P ++ C S+ ++++L L +R L+ A Sbjct: 123 AADIPEKLLCATQCSISEIQSLTSRLHALRSTLESA 158 >ref|YP_003518413.1| OhrR [Pantoea ananatis LMG 20103] gb|ADD75285.1| OhrR [Pantoea ananatis LMG 20103] dbj|BAK13360.1| organic hydroperoxide resistance transcriptional regulator OhrR [Pantoea ananatis AJ13355] Length = 154 Score = 170 bits (430), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 82/136 (60%), Positives = 110/136 (80%), Gaps = 1/136 (0%) Query: 21 LLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRLFLD 80 LLLD QLCFA+YSA+LAM K Y+KLL +DITYPQYLVM+VLW++D +TVSE+G RLFLD Sbjct: 15 LLLDQQLCFALYSANLAMHKVYRKLLTQMDITYPQYLVMLVLWQQDSLTVSEIGERLFLD 74 Query: 81 SGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLP-SLD 139 S TLTPLLKR+E GLL+R R +DER+V+VSLT AGR+LR++A+++P ++ C S D Sbjct: 75 SATLTPLLKRLENAGLLNRQRSRQDERQVVVSLTDAGRSLRQQAESIPDEIQCASDCSED 134 Query: 140 QVKNLVVELKQVRKGL 155 ++ +L ++L Q+R L Sbjct: 135 EMNSLKLQLNQLRDKL 150 >ref|YP_001796605.1| organic hydroperoxide resistance transcriptional regulator MarR family [Cupriavidus taiwanensis LMG 19424] emb|CAP63368.1| Organic hydroperoxide resistance transcriptional regulator, MarR family [Cupriavidus taiwanensis LMG 19424] Length = 158 Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 87/139 (62%), Positives = 107/139 (76%), Gaps = 1/139 (0%) Query: 21 LLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRLFLD 80 LLLDHQLCFA+YS+SLAMTK YK LL+ L +TYPQYLVM+VLWE + ++VSELG RL LD Sbjct: 12 LLLDHQLCFALYSSSLAMTKLYKPLLSELGLTYPQYLVMLVLWETETLSVSELGNRLALD 71 Query: 81 SGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLPS-LD 139 SGTLTPLLKR+ GL+ RTRDA DERRVLVSLT AGRALR +A+ +P QM C ++ Sbjct: 72 SGTLTPLLKRLAVSGLVTRTRDAADERRVLVSLTDAGRALRRRAEGIPEQMLCATQCPVE 131 Query: 140 QVKNLVVELKQVRKGLQDA 158 +++ L L +R L+ A Sbjct: 132 EIQALTRRLHALRSTLEQA 150 >ref|YP_004751576.1| organic hydroperoxide resistance transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK60753.1| Organic hydroperoxide resistance transcriptional regulator [Collimonas fungivorans Ter331] Length = 161 Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 83/137 (60%), Positives = 107/137 (78%), Gaps = 1/137 (0%) Query: 20 ALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRLFL 79 +LLLD+QLCFA+YSASL MTK YK LL + +TYPQYLV++ LWE+D++TVS LG RLFL Sbjct: 20 SLLLDNQLCFALYSASLTMTKLYKPLLQKMGLTYPQYLVLLTLWERDELTVSALGERLFL 79 Query: 80 DSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLP-SL 138 DSGTLTPLLKR+E+ G L R R DER+V+VSLT AG LR++A +P Q+SC + SL Sbjct: 80 DSGTLTPLLKRLESSGFLRRQRSPHDERQVIVSLTAAGNNLRQQALEIPQQVSCSVECSL 139 Query: 139 DQVKNLVVELKQVRKGL 155 D+VK L EL+++R + Sbjct: 140 DEVKALTQELRRLRAAM 156 >ref|ZP_06192469.1| transcriptional regulatory protein [Serratia odorifera 4Rx13] gb|EFA14948.1| transcriptional regulatory protein [Serratia odorifera 4Rx13] Length = 154 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 81/138 (58%), Positives = 109/138 (78%), Gaps = 1/138 (0%) Query: 21 LLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRLFLD 80 LLLD Q+CFA+YSA+LA+ K Y+KLL+ L++TYPQYLVM+VLWE+D++TVS++G RLFLD Sbjct: 15 LLLDQQMCFALYSANLALNKVYRKLLSQLELTYPQYLVMLVLWERDEITVSDIGERLFLD 74 Query: 81 SGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLP-SLD 139 S TLTPLLKR+E GLL R R DER+V+++LT GRALREKA+ VP + C SLD Sbjct: 75 SATLTPLLKRLETAGLLVRYRATTDERQVIIALTENGRALREKAQAVPEAVMCATDCSLD 134 Query: 140 QVKNLVVELKQVRKGLQD 157 ++ N+ +L+++R L D Sbjct: 135 EIVNIKQQLEKLRGKLID 152 >ref|YP_001476367.1| MarR family transcriptional regulator [Serratia proteamaculans 568] gb|ABV39239.1| transcriptional regulator, MarR family [Serratia proteamaculans 568] Length = 154 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 85/153 (55%), Positives = 118/153 (77%), Gaps = 6/153 (3%) Query: 4 MDNTQPPLLTEELIDQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLW 63 ++NT+ P T+ L LLLD QLCFA+YSA+LA+ K Y+KLL+ L++TYPQYLVM+VLW Sbjct: 3 IENTEQPA-TKNL----LLLDQQLCFALYSANLALNKVYRKLLSRLELTYPQYLVMLVLW 57 Query: 64 EKDQVTVSELGGRLFLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREK 123 E+D++ V+++G RLFLDS TLTPLLKR+E GLL R R DER+V+++LT AGRALREK Sbjct: 58 ERDEIRVTDIGERLFLDSATLTPLLKRLETAGLLARYRATTDERQVIIALTDAGRALREK 117 Query: 124 AKTVPLQMSCMLP-SLDQVKNLVVELKQVRKGL 155 A++VP + C SLD++ N+ +L+++R L Sbjct: 118 AQSVPEAVMCATDCSLDEIVNIKQQLEKLRGKL 150 >ref|YP_004680361.1| MarR family transcriptional regulator [Cupriavidus necator N-1] gb|AEI79129.1| transcriptional regulator MarR family [Cupriavidus necator N-1] Length = 158 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 86/139 (61%), Positives = 107/139 (76%), Gaps = 1/139 (0%) Query: 21 LLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRLFLD 80 LLLD QLCFA+YS+SLAMTK YK LL+ L +TYPQYLVM+VLWE + +TVSELG RL LD Sbjct: 12 LLLDRQLCFALYSSSLAMTKLYKPLLSELGLTYPQYLVMLVLWETETLTVSELGARLALD 71 Query: 81 SGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLPS-LD 139 SGTLTPLLKR+E L+ RTRDA DERRVLVSLT +GRALR++A+ +P QM C ++ Sbjct: 72 SGTLTPLLKRLETARLVTRTRDAADERRVLVSLTDSGRALRQRAEHIPEQMLCATQCPVE 131 Query: 140 QVKNLVVELKQVRKGLQDA 158 +++ L L +R L+ A Sbjct: 132 EIQALTQRLHALRSSLEQA 150 >ref|YP_004620598.1| transcriptional regulator OhrR [Ramlibacter tataouinensis TTB310] gb|AEG94579.1| Candidate transcriptional regulator OhrR (Organic hydroperoxide resistance transcriptional regulator), MarR family [Ramlibacter tataouinensis TTB310] Length = 168 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 7/146 (4%) Query: 18 DQALLLDHQLCFAMYSASLAMTKAYKKLLAPLDITYPQYLVMMVLWEKDQVTVSELGGRL 77 DQALLLD+QLCFA+YSASLAMTK YK LLA L +TYPQYL M+ LWE+D +TVSELG RL Sbjct: 23 DQALLLDNQLCFALYSASLAMTKLYKPLLAELGLTYPQYLAMLALWERDGLTVSELGERL 82 Query: 78 FLDSGTLTPLLKRMEAMGLLHRTRDAEDERRVLVSLTPAGRALREKAKTVPLQMSCMLP- 136 LDSGTLTPLLKR+EA GL+ R R EDERRV V+LT AGR L+ +A+ +P C+L Sbjct: 83 SLDSGTLTPLLKRLEAAGLVARLRAVEDERRVYVTLTAAGRRLKARARKIP---GCILAA 139 Query: 137 ---SLDQVKNLVVELKQVRKGLQDAE 159 SL +++ LV +++ +R+ L A Sbjct: 140 SRCSLPELRQLVGQVRGLREQLAAAS 165