BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0130.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775992.1| short chain dehydrogenase [Herbaspirillum se... 486 e-135 ref|YP_366855.1| short chain dehydrogenase [Burkholderia sp. 383... 358 5e-97 ref|NP_355010.1| short chain dehydrogenase [Agrobacterium tumefa... 356 1e-96 ref|ZP_08527735.1| short chain dehydrogenase [Agrobacterium sp. ... 350 1e-94 gb|EGP56563.1| short chain dehydrogenase [Agrobacterium tumefaci... 348 5e-94 ref|YP_004279274.1| short chain dehydrogenase [Agrobacterium sp.... 346 2e-93 ref|YP_001370279.1| short chain dehydrogenase [Ochrobactrum anth... 341 6e-92 ref|YP_003978321.1| short chain dehydrogenase family protein 22 ... 340 1e-91 ref|ZP_06862173.1| short chain dehydrogenase [Citromicrobium bat... 327 9e-88 ref|ZP_08249208.1| 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehy... 323 1e-86 >ref|YP_003775992.1| short chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64084.1| short chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 249 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 248/249 (99%), Positives = 248/249 (99%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALI AQGGRASVV Sbjct: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALICAQGGRASVV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF Sbjct: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI Sbjct: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY Sbjct: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 Query: 241 ADGGNSAVK 249 ADGGNSAVK Sbjct: 241 ADGGNSAVK 249 >ref|YP_366855.1| short chain dehydrogenase [Burkholderia sp. 383] gb|ABB06211.1| Short-chain dehydrogenase/reductase SDR [Burkholderia sp. 383] Length = 249 Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 182/249 (73%), Positives = 208/249 (83%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L+GKVA++TGAS GIGRA AL+FA HGA+++L AR + L QVA IR QGG+ Sbjct: 1 MTLLEGKVAIVTGASTGIGRAVALMFAAHGASVVLGARSEAPLNQVADEIRRQGGQPRAC 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 AGDVG+ TH R VA A+ EFGGLDIAINNAG VG KPLA++S +WQ TL NLT+AF Sbjct: 61 AGDVGDVDTHRRLVATAVREFGGLDIAINNAGTVGPLKPLADLSLDEWQQTLSTNLTAAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LGA QIPAML RG G+IVFTSSFVG+SAGLPGMAAYGA+KAGL GLVKGI ADYA +GI Sbjct: 121 LGASSQIPAMLERGGGSIVFTSSFVGTSAGLPGMAAYGASKAGLTGLVKGITADYAARGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT MGGD QK+WAAGLHAMKRIA+P+EIA+AALFLASPMASFVTG+AL+ Sbjct: 181 RANALLPGGVDTAMGGDRDQKEWAAGLHAMKRIARPDEIASAALFLASPMASFVTGSALF 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|NP_355010.1| short chain dehydrogenase [Agrobacterium tumefaciens str. C58] gb|AAK87795.1| short chain dehydrogenase [Agrobacterium tumefaciens str. C58] Length = 249 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 182/249 (73%), Positives = 204/249 (81%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L+ KVA+ITGAS+GIGRATA+LF GAA+++ AR + AL++VAA IR GGR V Sbjct: 1 MKLLENKVAIITGASSGIGRATAMLFVTQGAAVVINARGEKALQEVAADIRDAGGRVHAV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 AGD G A TH R A+ FGGLDIAINNAGAVGA KPLAEISP++W L+ NLTSAF Sbjct: 61 AGDAGVAETHSRLADAAVGVFGGLDIAINNAGAVGAMKPLAEISPEEWDHVLNVNLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LGAR QIP ML RG G+IVFTSSFVG+SAG+PGM+AYG AKA LMGLVKGI ADYA+ GI Sbjct: 121 LGARYQIPPMLKRGGGSIVFTSSFVGTSAGIPGMSAYGTAKAALMGLVKGITADYAINGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT GDP QK+WAAGLHAMKRIAQPEEIA AALFLASPMASFV G AL+ Sbjct: 181 RANALLPGGVDTPAAGDPAQKEWAAGLHAMKRIAQPEEIAQAALFLASPMASFVAGAALF 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|ZP_08527735.1| short chain dehydrogenase [Agrobacterium sp. ATCC 31749] gb|EGL65531.1| short chain dehydrogenase [Agrobacterium sp. ATCC 31749] Length = 249 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 181/249 (72%), Positives = 203/249 (81%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L+ KVA+ITGAS+GIGRATA+LFA GAA+++ AR + AL++VAA IR GGR V Sbjct: 1 MKLLENKVAIITGASSGIGRATAMLFATQGAAVVINARGEKALQEVAADIRDAGGRVHAV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 AGD G A TH R A+ FGGLDIAINNAGAVGA K LAEISP++W L+ NLTSAF Sbjct: 61 AGDAGVAETHSRLADAAVGIFGGLDIAINNAGAVGAMKRLAEISPEEWDHVLNVNLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LGAR QIP ML RG G+IVFTSSFVG+SAG+PGM+AYG AKA LMGLVKGI ADYA+ GI Sbjct: 121 LGARYQIPPMLKRGGGSIVFTSSFVGTSAGIPGMSAYGTAKAALMGLVKGITADYAINGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT GD QK+WAAGLHAMKRIAQPEEIA AALFLASPMASFV G AL+ Sbjct: 181 RANALLPGGVDTPAAGDAAQKEWAAGLHAMKRIAQPEEIAQAALFLASPMASFVAGAALF 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >gb|EGP56563.1| short chain dehydrogenase [Agrobacterium tumefaciens F2] Length = 249 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 177/249 (71%), Positives = 202/249 (81%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L+ KVA+ITGAS+GIGRATA LFA GAA+I+ AR ALE VA+ IR GGR V Sbjct: 1 MKLLENKVAIITGASSGIGRATARLFAEQGAAVIINARGAAALEDVASAIRQAGGRVHTV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 GDVG A TH R A+ FGGLDIA+NNAGAVGA KPLAEIS ++W + ANLTSAF Sbjct: 61 VGDVGIAETHARLTEAAMTIFGGLDIAVNNAGAVGAMKPLAEISVEEWDHVIAANLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LG R QIPAML RG G++VF SSFVG+SAG+PGMAAYG +KA LMGLVKGI ADYAV+GI Sbjct: 121 LGVRSQIPAMLKRGGGSVVFISSFVGTSAGIPGMAAYGTSKAALMGLVKGITADYAVKGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT M GD QK+WAAGLHAMKRIA+PEE+A AALFL+SPM+SFV G+AL+ Sbjct: 181 RANALLPGGVDTPMAGDAAQKEWAAGLHAMKRIAEPEELAQAALFLSSPMSSFVAGSALF 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|YP_004279274.1| short chain dehydrogenase [Agrobacterium sp. H13-3] gb|ADY64954.1| short chain dehydrogenase [Agrobacterium sp. H13-3] Length = 249 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 176/249 (70%), Positives = 202/249 (81%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L+ KVA+ITGAS+GIGRATA LFA GAA+I+ AR +ALE VA+ IR GGR V Sbjct: 1 MKLLENKVAIITGASSGIGRATARLFAEQGAAVIINARGAEALEDVASAIRQAGGRVHPV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 GDV A TH R A+ FGGLDIA+NNAGAVGA KPLAEIS ++W + ANLTSAF Sbjct: 61 VGDVTVAETHARLTDAAITVFGGLDIAVNNAGAVGATKPLAEISVEEWDHVIIANLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LG R QIPAML RG G++VF SSFVG+SAG+PGMAAYG AKA LMGLVKGI ADYA++GI Sbjct: 121 LGVRSQIPAMLKRGGGSVVFISSFVGTSAGIPGMAAYGTAKAALMGLVKGITADYAIKGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT M GD QK+WAAGLHAMKRIA+PEE+A AALFL+SPM+SFV G+AL+ Sbjct: 181 RANALLPGGVDTPMAGDAAQKEWAAGLHAMKRIAEPEELAQAALFLSSPMSSFVAGSALF 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|YP_001370279.1| short chain dehydrogenase [Ochrobactrum anthropi ATCC 49188] gb|ABS14450.1| short-chain dehydrogenase/reductase SDR [Ochrobactrum anthropi ATCC 49188] Length = 249 Score = 341 bits (875), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 174/249 (69%), Positives = 199/249 (79%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M++L+ KVA+ITGAS+GIGRA ALLFAR GAA++L AR LE+VA I A GG+A V Sbjct: 1 MSSLKDKVAIITGASSGIGRAAALLFAREGAAIVLNARGLAGLERVAEEIAAFGGKAHCV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 AGDV EA THE A A D FGGLDIA+NNAG VG PLAEI+P W L NLTSAF Sbjct: 61 AGDVSEAETHEVLAAAAKDTFGGLDIAVNNAGTVGPIAPLAEIAPDDWAGVLAGNLTSAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 +GAR QIP ML RG G+IVFTS+FVG+S G+PGM+ YG +KA LMG+VKGI ADY +GI Sbjct: 121 MGARSQIPLMLERGGGSIVFTSTFVGTSVGIPGMSVYGTSKAALMGMVKGITADYGARGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGGVDT MGGD + K+WAAGLHAMKRIAQPEEIA AALFLA PM+SFV G+ALY Sbjct: 181 RANALLPGGVDTPMGGDEKHKEWAAGLHAMKRIAQPEEIAQAALFLAGPMSSFVAGSALY 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|YP_003978321.1| short chain dehydrogenase family protein 22 [Achromobacter xylosoxidans A8] gb|ADP15606.1| short chain dehydrogenase family protein 22 [Achromobacter xylosoxidans A8] Length = 250 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 176/247 (71%), Positives = 199/247 (80%) Query: 3 TLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVVAG 62 +L GKVAL+TGAS+GIGRA AL A GAAL+LTARR+D LEQVA I + GGRA V G Sbjct: 4 SLAGKVALVTGASSGIGRAVALRLAAEGAALVLTARRRDLLEQVADEIGSAGGRACVAPG 63 Query: 63 DVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAFLG 122 DV TH V A EFGGLDIA+NNAG +G KPLAE++ +W+ TL NLT+AFLG Sbjct: 64 DVALPETHRLAVQAAQREFGGLDIAVNNAGTIGPVKPLAEVALDEWECTLSVNLTAAFLG 123 Query: 123 ARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGIRA 182 AR QIPAML RG GA+VF SSFVG+S GLPGMAAYG +KA LMGLVKGI ADY QGIRA Sbjct: 124 ARHQIPAMLERGGGALVFVSSFVGTSVGLPGMAAYGTSKAALMGLVKGITADYGAQGIRA 183 Query: 183 NALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALYAD 242 NALLPGGVDT+M G+ +QK WAA LHAMKRIA+ +EIA+AALFLASPMASFVTG+ALYAD Sbjct: 184 NALLPGGVDTEMAGNQEQKDWAAKLHAMKRIARADEIASAALFLASPMASFVTGSALYAD 243 Query: 243 GGNSAVK 249 GGNSAVK Sbjct: 244 GGNSAVK 250 >ref|ZP_06862173.1| short chain dehydrogenase [Citromicrobium bathyomarinum JL354] Length = 250 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 171/249 (68%), Positives = 191/249 (76%) Query: 1 MNTLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVV 60 M L GK A+ITGASAGIGRA A LFA HGA+L+L ARR D LE+VAA I QGG+ VV Sbjct: 1 MKLLDGKAAIITGASAGIGRAAAGLFAEHGASLVLVARRADRLEEVAAQIERQGGQVRVV 60 Query: 61 AGDVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAF 120 GDV + TH VA ALD FG LD+A NNAG VG PLA+ S + W + ANLT+AF Sbjct: 61 VGDVTQENTHRDAVATALDTFGRLDVAFNNAGLVGEMGPLADTSIETWTQVIDANLTAAF 120 Query: 121 LGARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGI 180 LGAR QIPAMLA G GA+VFTSSFVG+S GLPGM Y AAKAGLMGLV+ I ADYA QGI Sbjct: 121 LGARSQIPAMLAGGGGALVFTSSFVGNSVGLPGMGPYAAAKAGLMGLVRAITADYAAQGI 180 Query: 181 RANALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALY 240 RANALLPGG T+M D Q++WAA LHAMKRIA P EIA AALFLAS MASFVTG+AL+ Sbjct: 181 RANALLPGGTATEMADDADQREWAASLHAMKRIADPREIAQAALFLASEMASFVTGSALW 240 Query: 241 ADGGNSAVK 249 ADGGN+AVK Sbjct: 241 ADGGNAAVK 249 >ref|ZP_08249208.1| 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinC [Neisseria bacilliformis ATCC BAA-1200] gb|EGF07103.1| 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase LinC [Neisseria bacilliformis ATCC BAA-1200] Length = 253 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 165/247 (66%), Positives = 191/247 (77%) Query: 3 TLQGKVALITGASAGIGRATALLFARHGAALILTARRQDALEQVAALIRAQGGRASVVAG 62 L KVA + GAS+GIGRATALL A+ GAA++L A R D L Q AAL+R GGRA VAG Sbjct: 7 NLNNKVAAVIGASSGIGRATALLLAKQGAAVVLCALRADELAQTAALVREAGGRAETVAG 66 Query: 63 DVGEAATHERGVAMALDEFGGLDIAINNAGAVGACKPLAEISPQQWQDTLHANLTSAFLG 122 D + TH V A FGGLDIA+NN GA+GA KPLAE+SP +W+DTL +NLT+AFLG Sbjct: 67 DARQPETHAAVVRTAEQVFGGLDIAVNNVGALGAYKPLAELSPDEWRDTLDSNLTTAFLG 126 Query: 123 ARCQIPAMLARGAGAIVFTSSFVGSSAGLPGMAAYGAAKAGLMGLVKGIAADYAVQGIRA 182 AR QIPAML RG GA+VFTSSFVG+S LP ++AYG AKA L LVKGI ADYA QGIRA Sbjct: 127 ARSQIPAMLRRGGGALVFTSSFVGNSVALPNLSAYGTAKAALCALVKGITADYAAQGIRA 186 Query: 183 NALLPGGVDTDMGGDPQQKQWAAGLHAMKRIAQPEEIAAAALFLASPMASFVTGTALYAD 242 NA+L GG DTDM G+ +QK WAAGLHA+KRIAQPEEIA+ FLA P ASFVTG +L+AD Sbjct: 187 NAVLAGGADTDMAGNAEQKAWAAGLHAVKRIAQPEEIASVIAFLAGPAASFVTGASLFAD 246 Query: 243 GGNSAVK 249 GGNS+VK Sbjct: 247 GGNSSVK 253