BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0128.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775994.1| phytoene synthase [Herbaspirillum seropedica... 537 e-151 ref|YP_001100036.1| putative terpenoid synthase-related protein ... 387 e-106 emb|CAL61911.2| putative phytoene synthase CrtB-like [Herminiimo... 387 e-106 ref|YP_004753096.1| phytoene synthase [Collimonas fungivorans Te... 386 e-105 gb|ADU90691.1| putative phytoene/squalene synthase [Collimonas s... 384 e-105 ref|YP_001353219.1| squalene/phytoene synthase protein [Janthino... 379 e-103 ref|ZP_04578792.1| squalene/phytoene synthase [Oxalobacter formi... 358 6e-97 ref|ZP_08274868.1| Phytoene synthase [Oxalobacteraceae bacterium... 351 7e-95 ref|YP_160917.1| terpenoid synthase-related protein [Aromatoleum... 341 5e-92 ref|ZP_04576607.1| squalene/phytoene synthase [Oxalobacter formi... 339 3e-91 >ref|YP_003775994.1| phytoene synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64086.1| phytoene synthase protein [Herbaspirillum seropedicae SmR1] Length = 269 Score = 537 bits (1383), Expect = e-151, Method: Compositional matrix adjust. Identities = 266/269 (98%), Positives = 266/269 (98%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAVDHYENFPVASLLLPARLRPAV DIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD Sbjct: 1 MAVDHYENFPVASLLLPARLRPAVTDIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA Sbjct: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT Sbjct: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRIL RI Sbjct: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILARI 240 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 ERVQGDVFGHRPKLGKADWLAVG RALTM Sbjct: 241 ERVQGDVFGHRPKLGKADWLAVGGRALTM 269 >ref|YP_001100036.1| putative terpenoid synthase-related protein [Herminiimonas arsenicoxydans] Length = 284 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/269 (72%), Positives = 218/269 (81%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAVDHYENFPVAS+LLPARLRPAV IYAFARSADD+ADEGDA+ EERLA L AYE LD Sbjct: 7 MAVDHYENFPVASILLPARLRPAVEIIYAFARSADDVADEGDASAEERLAALTAYENGLD 66 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 IA Q TP+F L IA + LPLQP RDLLSAF+QDV TTRY ++ LLDYCRRSA Sbjct: 67 QIAAGQTPDTPLFRELAKVIADYHLPLQPFRDLLSAFKQDVSTTRYADFSLLLDYCRRSA 126 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVGTLMLHLYGAA+ ENLRDSDAICSALQLINFWQD+AID +K RIYLP ED+ F V Sbjct: 127 NPVGTLMLHLYGAANAENLRDSDAICSALQLINFWQDVAIDMRKARIYLPQEDMQTFRVG 186 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 E IA R D W+ LM+FE+ RAR+++++GAPLA RLPGRIGWELRLVVQGGLRIL RI Sbjct: 187 EEHIAGQRIDQAWRNLMQFEISRARSMLISGAPLALRLPGRIGWELRLVVQGGLRILERI 246 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E V DVF HRPKLGK+DWL + WRA+ M Sbjct: 247 EAVDYDVFRHRPKLGKSDWLRLIWRAICM 275 >emb|CAL61911.2| putative phytoene synthase CrtB-like [Herminiimonas arsenicoxydans] Length = 278 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/269 (72%), Positives = 218/269 (81%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAVDHYENFPVAS+LLPARLRPAV IYAFARSADD+ADEGDA+ EERLA L AYE LD Sbjct: 1 MAVDHYENFPVASILLPARLRPAVEIIYAFARSADDVADEGDASAEERLAALTAYENGLD 60 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 IA Q TP+F L IA + LPLQP RDLLSAF+QDV TTRY ++ LLDYCRRSA Sbjct: 61 QIAAGQTPDTPLFRELAKVIADYHLPLQPFRDLLSAFKQDVSTTRYADFSLLLDYCRRSA 120 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVGTLMLHLYGAA+ ENLRDSDAICSALQLINFWQD+AID +K RIYLP ED+ F V Sbjct: 121 NPVGTLMLHLYGAANAENLRDSDAICSALQLINFWQDVAIDMRKARIYLPQEDMQTFRVG 180 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 E IA R D W+ LM+FE+ RAR+++++GAPLA RLPGRIGWELRLVVQGGLRIL RI Sbjct: 181 EEHIAGQRIDQAWRNLMQFEISRARSMLISGAPLALRLPGRIGWELRLVVQGGLRILERI 240 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E V DVF HRPKLGK+DWL + WRA+ M Sbjct: 241 EAVDYDVFRHRPKLGKSDWLRLIWRAICM 269 >ref|YP_004753096.1| phytoene synthase [Collimonas fungivorans Ter331] gb|AEK62273.1| Phytoene synthase [Collimonas fungivorans Ter331] Length = 270 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/269 (69%), Positives = 215/269 (79%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 M+++HYENFPVASLLLPARLRPAV IYAFARSADD+ADEGDAAPE+RL LHAYE LD Sbjct: 1 MSINHYENFPVASLLLPARLRPAVRAIYAFARSADDLADEGDAAPEQRLRALHAYETALD 60 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 I +Q + +F+ L I + LPL P RDLLSAF+QDVVTTRY + +LLDYCRRSA Sbjct: 61 RIKHKQAAESSLFQTLGQVIVEYRLPLAPFRDLLSAFKQDVVTTRYSQFPELLDYCRRSA 120 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVG LMLHLYGAA+E+NLRDSDAICSALQLINFWQD+AIDW K RIYLPLEDL RFGV+ Sbjct: 121 NPVGALMLHLYGAATEQNLRDSDAICSALQLINFWQDVAIDWDKARIYLPLEDLQRFGVS 180 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 +A G D W++LM+FEV+RAR++M LA RLPGRIGWELRLVVQGGLRIL + Sbjct: 181 QAQLAGGTVDHAWRRLMQFEVQRARSMMTGAQALALRLPGRIGWELRLVVQGGLRILELL 240 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E D+F RPKLGKADWL + WRAL M Sbjct: 241 EAADYDMFRRRPKLGKADWLLLAWRALRM 269 >gb|ADU90691.1| putative phytoene/squalene synthase [Collimonas sp. MPS11E8] Length = 270 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 188/269 (69%), Positives = 214/269 (79%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 M+ +HYENFPVAS+L+PARLRPAV IYAFARSADDIADEGDA+P++RL L+AYEA LD Sbjct: 1 MSTNHYENFPVASILMPARLRPAVKAIYAFARSADDIADEGDASPDQRLRALNAYEAALD 60 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 I +QQ +P+F L I + LPL P RDLLSAF+QDV+TTRY + LLDYCRRSA Sbjct: 61 RIEQQQAAESPLFLALHEVITAYGLPLAPFRDLLSAFKQDVITTRYSQFAGLLDYCRRSA 120 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVG LMLHLYGAASE+NLRDSDAICSALQLINFWQD+AIDW K RIYLPLEDL RFGV+ Sbjct: 121 NPVGALMLHLYGAASEQNLRDSDAICSALQLINFWQDVAIDWDKARIYLPLEDLQRFGVS 180 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 +A G D W++LM FEV+RARA+M LA RLPGRIGWELRLVVQGGLRIL + Sbjct: 181 QAQLADGAVDHAWRRLMEFEVQRARAMMTGAQALALRLPGRIGWELRLVVQGGLRILELL 240 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E Q D+F RPKL KADWL + WRAL M Sbjct: 241 ESAQYDMFRQRPKLHKADWLLLAWRALRM 269 >ref|YP_001353219.1| squalene/phytoene synthase protein [Janthinobacterium sp. Marseille] gb|ABR88842.1| squalene/phytoene synthase protein [Janthinobacterium sp. Marseille] Length = 291 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 187/269 (69%), Positives = 216/269 (80%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 M+VDHYENFPVAS+LLPARLRPAV IYAFARSADD+ADEG+A P+ERLA L AYE QLD Sbjct: 20 MSVDHYENFPVASILLPARLRPAVEVIYAFARSADDLADEGNATPDERLAALAAYEQQLD 79 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 I T +F +L IA + LPLQP RDLLSAF+QDVVTTRY + DLLDYCRRSA Sbjct: 80 QIEAGTTADTALFRKLAQVIAEYHLPLQPFRDLLSAFKQDVVTTRYAGFNDLLDYCRRSA 139 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVGTLMLHLYGAA+ NLR+SD ICSALQLINFWQD+AIDWQK+RIYLP +DL +F + Sbjct: 140 NPVGTLMLHLYGAANAGNLRESDDICSALQLINFWQDVAIDWQKERIYLPQQDLQKFNIA 199 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 + IA D W+QLM+FEV+RARA++L+GAPLA RLPGRIGWELRLVVQGGLRIL + Sbjct: 200 EQQIAQQTVDAAWRQLMQFEVQRARAMLLSGAPLALRLPGRIGWELRLVVQGGLRILECL 259 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E D+F RPKLGK+DWL + RA+ M Sbjct: 260 EASGYDMFRQRPKLGKSDWLLLLLRAIRM 288 >ref|ZP_04578792.1| squalene/phytoene synthase [Oxalobacter formigenes OXCC13] gb|EEO29765.1| squalene/phytoene synthase [Oxalobacter formigenes OXCC13] Length = 284 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 177/267 (66%), Positives = 201/267 (75%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAV+HYENFPVAS+LLP+ LR V IYAFARSADDIADEGD PEERLA L Y A+LD Sbjct: 14 MAVEHYENFPVASILLPSNLRKPVEVIYAFARSADDIADEGDFRPEERLAALSGYIAELD 73 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 I R + +F L+ I LPL P R+LL+AF QD+ T RYE Y DLLDYCR SA Sbjct: 74 TIERNGHPDSKLFIDLKQVIGEFRLPLAPFRNLLAAFIQDISTKRYETYDDLLDYCRLSA 133 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVG LMLHLY AA+EEN R SDAIC++LQLINFWQDIAIDW+K RIYLPLE+LARF VT Sbjct: 134 NPVGLLMLHLYEAATEENKRMSDAICTSLQLINFWQDIAIDWKKDRIYLPLEELARFNVT 193 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 DIA G W+ LM+FE++R R LML+GAPLA RLPGRIGWELRLVVQGGLRIL RI Sbjct: 194 ASDIATGNLSDNWRSLMQFEIDRTRKLMLSGAPLASRLPGRIGWELRLVVQGGLRILDRI 253 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRAL 267 E D+F RP L DWL++ W+ L Sbjct: 254 EMAACDIFNKRPLLQGGDWLSIIWQCL 280 >ref|ZP_08274868.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31656.1| Phytoene synthase [Oxalobacteraceae bacterium IMCC9480] Length = 269 Score = 351 bits (900), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 197/269 (73%), Positives = 212/269 (78%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAVDHYENFPVAS+LLPARLRPAV IYAFARSADDIADEGDA P++R+A L AYEAQLD Sbjct: 1 MAVDHYENFPVASILLPARLRPAVEAIYAFARSADDIADEGDARPDQRIAALDAYEAQLD 60 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 LIA +F +L + LPL PLRDLLSAFRQDVVTTRY +T LLDYCRRSA Sbjct: 61 LIAAGGVPTEALFRKLHGVVQAWRLPLTPLRDLLSAFRQDVVTTRYADFTTLLDYCRRSA 120 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVG LMLHLYGAA NL SDAICSALQLINFWQD+AIDWQK RIYLP+EDLARFGV Sbjct: 121 NPVGALMLHLYGAADVRNLAQSDAICSALQLINFWQDVAIDWQKSRIYLPMEDLARFGVD 180 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 + R D W+QLM FEVERARAL+LAGAPLA RLPGRIGWELRLVVQGGL IL I Sbjct: 181 ETHLNEQRVDDAWRQLMAFEVERARALLLAGAPLALRLPGRIGWELRLVVQGGLHILAAI 240 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRALTM 269 E DVF RPKL KAD+L + WRAL M Sbjct: 241 EAADYDVFRQRPKLRKADYLRLLWRALRM 269 >ref|YP_160917.1| terpenoid synthase-related protein [Aromatoleum aromaticum EbN1] emb|CAI10016.1| probable terpenoid synthase-related protein [Aromatoleum aromaticum EbN1] Length = 277 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 179/271 (66%), Positives = 200/271 (73%), Gaps = 4/271 (1%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 M VDHYENFPVASLLLPARLR V IYAFARSADDIADEGDA RLA L+ Y +LD Sbjct: 1 MPVDHYENFPVASLLLPARLREPVEAIYAFARSADDIADEGDAPAVARLARLNDYRLELD 60 Query: 61 LIARQQP----CATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYC 116 I R P PMF+RL I H LPL RDLL AF QDV TRY + +L DYC Sbjct: 61 AIGRGAPPRDAGLAPMFDRLARNIRTHALPLPLFRDLLDAFSQDVGKTRYADFAELTDYC 120 Query: 117 RRSANPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLAR 176 RRSANPVG L+LHLYGAA+ +NLR SD IC++LQLINFWQD+A+D K+RIY+P +DLAR Sbjct: 121 RRSANPVGRLLLHLYGAATPDNLRLSDRICTSLQLINFWQDVAVDRAKRRIYVPQDDLAR 180 Query: 177 FGVTPEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRI 236 FGV DI AGRCD RW+ LM FEV+RARA ML GAPLA+RLPGRIGWELRL+V GGLRI Sbjct: 181 FGVGEADIDAGRCDERWRALMTFEVQRARATMLEGAPLARRLPGRIGWELRLMVAGGLRI 240 Query: 237 LTRIERVQGDVFGHRPKLGKADWLAVGWRAL 267 L IE DVF RP LG+ DW + WRAL Sbjct: 241 LELIEAADYDVFRRRPMLGRTDWPRLAWRAL 271 >ref|ZP_04576607.1| squalene/phytoene synthase [Oxalobacter formigenes HOxBLS] gb|EEO27569.1| squalene/phytoene synthase [Oxalobacter formigenes HOxBLS] Length = 285 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 169/267 (63%), Positives = 196/267 (73%) Query: 1 MAVDHYENFPVASLLLPARLRPAVADIYAFARSADDIADEGDAAPEERLAGLHAYEAQLD 60 MAV+HYENFPVAS+LLP+RLR V IY FARSADDIADEGD + ERLA L Y +LD Sbjct: 14 MAVEHYENFPVASILLPSRLRQPVEVIYHFARSADDIADEGDLSSSERLAALSFYADELD 73 Query: 61 LIARQQPCATPMFERLRHTIARHELPLQPLRDLLSAFRQDVVTTRYEHYTDLLDYCRRSA 120 I R + +F L T+ LPL+P ++LL AFRQD+ RY+ + DLLDYCR SA Sbjct: 74 RIGRGETPRRELFVALGKTVRDFHLPLEPFKNLLFAFRQDISVKRYDAFADLLDYCRCSA 133 Query: 121 NPVGTLMLHLYGAASEENLRDSDAICSALQLINFWQDIAIDWQKQRIYLPLEDLARFGVT 180 NPVG LMLHLY AA+EEN R SDAIC+ALQLINFWQD+A+DWQK RIY+P ED+ FGVT Sbjct: 134 NPVGLLMLHLYDAATEENCRMSDAICTALQLINFWQDVALDWQKDRIYIPQEDMRAFGVT 193 Query: 181 PEDIAAGRCDGRWQQLMRFEVERARALMLAGAPLAKRLPGRIGWELRLVVQGGLRILTRI 240 P+DIA W+ LM FE ER R LM +GAPLA++LPGRIGWELRLVVQGGLRIL RI Sbjct: 194 PDDIAGANVSENWKALMAFETERTRKLMHSGAPLAEKLPGRIGWELRLVVQGGLRILERI 253 Query: 241 ERVQGDVFGHRPKLGKADWLAVGWRAL 267 E DVF RP L DWL++ WR L Sbjct: 254 ESAGFDVFRKRPVLRGGDWLSIVWRCL 280