BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0122.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776000.1| Mg-dependent DNase [Herbaspirillum seropedic... 530 e-149 ref|YP_001353672.1| Mg-dependent DNase [Janthinobacterium sp. Ma... 433 e-119 ref|YP_004753101.1| putative deoxyribonuclease YcfH [Collimonas ... 431 e-119 emb|CAL61572.2| putative Mg-dependent DNase, TatD [Herminiimonas... 426 e-117 gb|ACN58898.1| putative deoxyribonuclease YcfH [uncultured bacte... 424 e-117 ref|ZP_08274935.1| Putative deoxyribonuclease YcfH [Oxalobactera... 419 e-115 ref|YP_001099699.1| metallo-dependent hydrolase [Herminiimonas a... 390 e-106 ref|YP_726073.1| Mg-dependent DNase [Ralstonia eutropha H16] >gi... 385 e-105 ref|YP_295651.1| TatD-related deoxyribonuclease [Ralstonia eutro... 385 e-105 ref|YP_004685418.1| Mg-dependent DNase [Cupriavidus necator N-1]... 385 e-105 >ref|YP_003776000.1| Mg-dependent DNase [Herbaspirillum seropedicae SmR1] gb|ADJ64092.1| Mg-dependent DNase protein [Herbaspirillum seropedicae SmR1] Length = 259 Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust. Identities = 257/259 (99%), Positives = 257/259 (99%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV Sbjct: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT Sbjct: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI Sbjct: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAKDLQQVAR IPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRG SA Sbjct: 181 VTFKSAKDLQQVARAIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGTSA 240 Query: 241 AEVARQTSENFFKLFGIKP 259 AEVARQTSENFFKLFGIKP Sbjct: 241 AEVARQTSENFFKLFGIKP 259 >ref|YP_001353672.1| Mg-dependent DNase [Janthinobacterium sp. Marseille] gb|ABR89063.1| Mg-dependent DNase [Janthinobacterium sp. Marseille] Length = 259 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 211/257 (82%), Positives = 237/257 (92%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 M+IDSHCHINFP+LAAR+PEI GKMAEN+VSHALCVSVDLPDFP VL LAE+YPH+YASV Sbjct: 1 MFIDSHCHINFPELAARMPEILGKMAENKVSHALCVSVDLPDFPSVLELAERYPHIYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDYEDTPEPSV++LVRL++HP+IVAIGETGLDYYRL+GDLEWQRERFR HIRASRAT Sbjct: 61 GVHPDYEDTPEPSVEDLVRLSEHPKIVAIGETGLDYYRLEGDLEWQRERFRRHIRASRAT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 GKPLIIHTRAASEDTIRI+REEGA AGGAAGVMHCFTES EVA AA+++GFYISFSGI Sbjct: 121 GKPLIIHTRAASEDTIRIMREEGAGTDAGGAAGVMHCFTESLEVARAAMDMGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAKDLQ VAR +PLE+MLIETDSPYLAPVP RGK NEPG VRHVGE++A L+G+ Sbjct: 181 VTFKSAKDLQAVAREVPLEQMLIETDSPYLAPVPHRGKVNEPGLVRHVGEYLATLKGVPL 240 Query: 241 AEVARQTSENFFKLFGI 257 ++A+QTS+NFF LF I Sbjct: 241 EQLAQQTSDNFFNLFKI 257 >ref|YP_004753101.1| putative deoxyribonuclease YcfH [Collimonas fungivorans Ter331] gb|AEK62278.1| Putative deoxyribonuclease YcfH [Collimonas fungivorans Ter331] Length = 264 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 206/257 (80%), Positives = 233/257 (90%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 MYIDSHCHINFP+L+AR+PE+ KMA+NQV+HALCVSVDLPDFPQVL LAE YPH+YASV Sbjct: 1 MYIDSHCHINFPELSARMPEVLAKMAQNQVTHALCVSVDLPDFPQVLELAETYPHIYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDYEDTPEPSVD+LVRL+DHP+I+AIGETGLDYYRLQGDLEWQRERFR HIRASRAT Sbjct: 61 GVHPDYEDTPEPSVDDLVRLSDHPKIIAIGETGLDYYRLQGDLEWQRERFRRHIRASRAT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 GKPLIIHTRAAS DTIRI++EEGA AGGA GVMHCFTES EVA+AA+ +GFYISFSGI Sbjct: 121 GKPLIIHTRAASTDTIRIMQEEGAGTDAGGAGGVMHCFTESLEVAEAAMAMGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAK+LQ VA +PL LIETDSPYLAPVP RGK NEPG+V HVGEF+A+L+G+ A Sbjct: 181 VTFKSAKELQAVALAVPLSSTLIETDSPYLAPVPHRGKMNEPGWVMHVGEFLANLKGVPA 240 Query: 241 AEVARQTSENFFKLFGI 257 AEVA+QT++NFF LF + Sbjct: 241 AEVAQQTTDNFFNLFKL 257 >emb|CAL61572.2| putative Mg-dependent DNase, TatD [Herminiimonas arsenicoxydans] Length = 259 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/257 (80%), Positives = 233/257 (90%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 MYIDSHCHINFP+LAAR+PEI GKMAEN+VSHALCVS DLP+FP VL LAE+YP++YASV Sbjct: 1 MYIDSHCHINFPELAARMPEILGKMAENEVSHALCVSCDLPNFPGVLELAERYPNIYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDYEDTPEPSVD+L+RL+DHP+IVAIGETGLDYYRL+GDLEWQRERFR HIRASRAT Sbjct: 61 GVHPDYEDTPEPSVDDLIRLSDHPKIVAIGETGLDYYRLEGDLEWQRERFRRHIRASRAT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 GKPLIIHTRAASEDTIRI+REEGA AGGAAGVMHCFTES EVA AA+E+GFYISFSGI Sbjct: 121 GKPLIIHTRAASEDTIRIMREEGAGTDAGGAAGVMHCFTESLEVAKAAMEMGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAKDLQ VAR +PLE+MLIETDSPYLAPVP RGK NEPG VRHV E++A L+ + Sbjct: 181 VTFKSAKDLQSVAREVPLEQMLIETDSPYLAPVPHRGKVNEPGLVRHVAEYLALLKDVPL 240 Query: 241 AEVARQTSENFFKLFGI 257 +A+QT++NFF LF I Sbjct: 241 ERIAQQTTDNFFNLFKI 257 >gb|ACN58898.1| putative deoxyribonuclease YcfH [uncultured bacterium BLR18] Length = 259 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 196/255 (76%), Positives = 227/255 (89%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 M+IDSHCHINFP+LA R+PE+ KM +N+V+HALCVSVDLPDFPQVLALAEQ+PH+YASV Sbjct: 1 MFIDSHCHINFPELATRMPELLAKMEQNKVTHALCVSVDLPDFPQVLALAEQHPHIYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDYEDTPEP+V++LV LA++PRI+AIGETGLDYYRL+GDLEWQRERFRTHI+ASR T Sbjct: 61 GVHPDYEDTPEPTVEQLVELANNPRIIAIGETGLDYYRLEGDLEWQRERFRTHIKASRIT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 KPLIIHTR+AS DTIRI+ EEGA GG AGVMHCFTES EVA AA+ +GFYISFSGI Sbjct: 121 RKPLIIHTRSASADTIRIMAEEGAGTDQGGVAGVMHCFTESLEVARAAMAMGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAK+LQ VA +PL+RMLIETDSPYLAP+P RGK NEPG+V HV E+IA L+G+ Sbjct: 181 VTFKSAKELQAVALEVPLDRMLIETDSPYLAPMPHRGKMNEPGFVCHVAEYIAKLKGVPL 240 Query: 241 AEVARQTSENFFKLF 255 +VARQTS+NFFKLF Sbjct: 241 EDVARQTSDNFFKLF 255 >ref|ZP_08274935.1| Putative deoxyribonuclease YcfH [Oxalobacteraceae bacterium IMCC9480] gb|EGF31594.1| Putative deoxyribonuclease YcfH [Oxalobacteraceae bacterium IMCC9480] Length = 259 Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/257 (79%), Positives = 229/257 (89%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 MYIDSHCHINFP+LAARLPEIF KMAEN+V+HALCVSVDLPDFPQVL LA++Y H+YASV Sbjct: 1 MYIDSHCHINFPELAARLPEIFDKMAENKVTHALCVSVDLPDFPQVLDLAQRYDHIYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRAT 120 GVHPDY DTPEPSV +LV L+DHP+IVAIGETGLDY+RL GDLEWQRERFR HIRASRAT Sbjct: 61 GVHPDYVDTPEPSVAQLVALSDHPKIVAIGETGLDYFRLTGDLEWQRERFRVHIRASRAT 120 Query: 121 GKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGI 180 GKPLIIHTRA+SEDTIRI++EEGA AGGA GVMHCFTES VA+AAI +GFYISFSGI Sbjct: 121 GKPLIIHTRASSEDTIRIMQEEGAGTNAGGAGGVMHCFTESLAVAEAAIAMGFYISFSGI 180 Query: 181 VTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISA 240 VTFKSAK+LQ VA +PLE MLIETDSPYLAP+P RGK NEPG VRHV EFIA L+G+ Sbjct: 181 VTFKSAKELQAVALAVPLENMLIETDSPYLAPMPHRGKMNEPGLVRHVAEFIASLKGVPV 240 Query: 241 AEVARQTSENFFKLFGI 257 VA+QT++NFFKLFG+ Sbjct: 241 ELVAQQTTDNFFKLFGM 257 >ref|YP_001099699.1| metallo-dependent hydrolase [Herminiimonas arsenicoxydans] Length = 242 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/240 (80%), Positives = 216/240 (90%) Query: 18 LPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASVGVHPDYEDTPEPSVDEL 77 +PEI GKMAEN+VSHALCVS DLP+FP VL LAE+YP++YASVGVHPDYEDTPEPSVD+L Sbjct: 1 MPEILGKMAENEVSHALCVSCDLPNFPGVLELAERYPNIYASVGVHPDYEDTPEPSVDDL 60 Query: 78 VRLADHPRIVAIGETGLDYYRLQGDLEWQRERFRTHIRASRATGKPLIIHTRAASEDTIR 137 +RL+DHP+IVAIGETGLDYYRL+GDLEWQRERFR HIRASRATGKPLIIHTRAASEDTIR Sbjct: 61 IRLSDHPKIVAIGETGLDYYRLEGDLEWQRERFRRHIRASRATGKPLIIHTRAASEDTIR 120 Query: 138 ILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISFSGIVTFKSAKDLQQVARTIP 197 I+REEGA AGGAAGVMHCFTES EVA AA+E+GFYISFSGIVTFKSAKDLQ VAR +P Sbjct: 121 IMREEGAGTDAGGAAGVMHCFTESLEVAKAAMEMGFYISFSGIVTFKSAKDLQSVAREVP 180 Query: 198 LERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRGISAAEVARQTSENFFKLFGI 257 LE+MLIETDSPYLAPVP RGK NEPG VRHV E++A L+ + +A+QT++NFF LF I Sbjct: 181 LEQMLIETDSPYLAPVPHRGKVNEPGLVRHVAEYLALLKDVPLERIAQQTTDNFFNLFKI 240 >ref|YP_726073.1| Mg-dependent DNase [Ralstonia eutropha H16] emb|CAJ92705.1| Mg-dependent DNase [Ralstonia eutropha H16] Length = 264 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 181/259 (69%), Positives = 217/259 (83%), Gaps = 8/259 (3%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 M++DSHCHI+FP+LAARLPE+ M NQV+HALC+SV L DFP+VLALAEQ+P++YASV Sbjct: 1 MFVDSHCHIDFPELAARLPELLENMRANQVTHALCISVTLEDFPRVLALAEQHPNLYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQG----DLEWQRERFRTHIRA 116 GVHPDYE EP+++ LV L+ HPR+V GETGLDYYRL G D+EWQRERFRTHIRA Sbjct: 61 GVHPDYEGGEEPTLERLVELSAHPRVVGTGETGLDYYRLNGRSIADMEWQRERFRTHIRA 120 Query: 117 SRATGKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYIS 176 +R TGKPLIIHTR++++DT+R++REE A A GVMHCFTE+ +VA A++ GF+IS Sbjct: 121 ARQTGKPLIIHTRSSADDTLRLMREENARE----AGGVMHCFTETWDVARQALDEGFHIS 176 Query: 177 FSGIVTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLR 236 FSGIVTFKSA DLQ+ AR +PLERMLIETDSPYLAPVP+RGKTNEP +VRHVGEFIA LR Sbjct: 177 FSGIVTFKSAADLQETARKVPLERMLIETDSPYLAPVPYRGKTNEPAWVRHVGEFIAQLR 236 Query: 237 GISAAEVARQTSENFFKLF 255 GI +VA QT+ENFFKLF Sbjct: 237 GIPVEQVAEQTTENFFKLF 255 >ref|YP_295651.1| TatD-related deoxyribonuclease [Ralstonia eutropha JMP134] gb|AAZ60807.1| TatD-related deoxyribonuclease [Ralstonia eutropha JMP134] Length = 265 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 178/258 (68%), Positives = 218/258 (84%), Gaps = 8/258 (3%) Query: 2 YIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASVG 61 ++DSHCHI+FPDLAARLPE+ M NQVSHALC+SV L DFP+VLALAEQ+P++YASVG Sbjct: 3 FVDSHCHIDFPDLAARLPELLENMRANQVSHALCISVTLEDFPRVLALAEQHPNLYASVG 62 Query: 62 VHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQG----DLEWQRERFRTHIRAS 117 VHPDYE+ EP+++ L+ L+ HPR+V GETGLDYYRL G D+EWQRERFRTHIRA+ Sbjct: 63 VHPDYEEGEEPTLERLLELSAHPRVVGTGETGLDYYRLNGRSIADMEWQRERFRTHIRAA 122 Query: 118 RATGKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYISF 177 R TGKPLIIHTR++++DT+R++REE A G A GVMHCFTE+ +VA A++ GF+ISF Sbjct: 123 RQTGKPLIIHTRSSADDTLRVMREENA----GEAGGVMHCFTETWDVAKQALDEGFHISF 178 Query: 178 SGIVTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLRG 237 SGIVTFKSA DLQ+ AR +PL+RMLIETDSPYLAPVP+RGKTNEP +VRHVGEFIA LRG Sbjct: 179 SGIVTFKSAADLQETARKVPLDRMLIETDSPYLAPVPYRGKTNEPAWVRHVGEFIAKLRG 238 Query: 238 ISAAEVARQTSENFFKLF 255 + ++A QT++NFFKLF Sbjct: 239 LPVEQIAEQTTDNFFKLF 256 >ref|YP_004685418.1| Mg-dependent DNase [Cupriavidus necator N-1] gb|AEI76937.1| Mg-dependent DNase [Cupriavidus necator N-1] Length = 264 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/259 (69%), Positives = 217/259 (83%), Gaps = 8/259 (3%) Query: 1 MYIDSHCHINFPDLAARLPEIFGKMAENQVSHALCVSVDLPDFPQVLALAEQYPHVYASV 60 M++DSHCHI+FP+LAARLPE+ M NQV+HALC+SV L DFP+VLALAEQ+P++YASV Sbjct: 1 MFVDSHCHIDFPELAARLPELLENMRANQVTHALCISVTLEDFPRVLALAEQHPNLYASV 60 Query: 61 GVHPDYEDTPEPSVDELVRLADHPRIVAIGETGLDYYRLQG----DLEWQRERFRTHIRA 116 GVHPDYE+ EP+++ LV L+ HPR+V GETGLDYYRL G D+EWQRERFRTHIRA Sbjct: 61 GVHPDYEEGEEPTLERLVELSAHPRVVGTGETGLDYYRLNGRSIADMEWQRERFRTHIRA 120 Query: 117 SRATGKPLIIHTRAASEDTIRILREEGASPQAGGAAGVMHCFTESQEVADAAIELGFYIS 176 +R TGKPLIIHTR++++DT+R++REE A A GVMHCFTE+ +VA A++ GF+IS Sbjct: 121 ARQTGKPLIIHTRSSADDTLRLMREENARE----AGGVMHCFTETWDVARQALDEGFHIS 176 Query: 177 FSGIVTFKSAKDLQQVARTIPLERMLIETDSPYLAPVPFRGKTNEPGYVRHVGEFIADLR 236 FSGIVTFKSA DLQ+ AR +PLERMLIETDSPYLAPVP+RGKTNEP +VRHVGEFIA LR Sbjct: 177 FSGIVTFKSAADLQETARKVPLERMLIETDSPYLAPVPYRGKTNEPAWVRHVGEFIAQLR 236 Query: 237 GISAAEVARQTSENFFKLF 255 G+ +VA QT+ENFF LF Sbjct: 237 GVPVEQVAEQTTENFFNLF 255