BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0081.p (402 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776037.1| branched-chain amino acid ABC transporter pe... 802 0.0 ref|NP_793838.1| branched-chain amino acid ABC transporter perme... 607 e-171 ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [... 607 e-171 gb|EGH13817.1| branched-chain amino acid ABC transporter permeas... 606 e-171 ref|ZP_03397772.1| branched-chain amino acid ABC transporter, pe... 606 e-171 gb|EGH97357.1| branched-chain amino acid ABC transporter, permea... 606 e-171 ref|ZP_07252269.1| branched-chain amino acid ABC transporter, pe... 604 e-171 ref|YP_004753577.1| urea ABC transporter permease UrtC [Collimon... 600 e-169 ref|YP_004355043.1| High-affinity branched-chain amino acid ABC ... 575 e-162 gb|AEA83419.1| branched-chain amino acid ABC transporter, permea... 554 e-156 >ref|YP_003776037.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64129.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 401 Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/401 (100%), Positives = 401/401 (100%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY Sbjct: 1 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 60 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF Sbjct: 61 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 120 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV Sbjct: 121 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 180 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV Sbjct: 181 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 240 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 241 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 300 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL Sbjct: 301 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 360 Query: 362 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIEPGATLEASK 402 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIEPGATLEASK Sbjct: 361 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIEPGATLEASK 401 >ref|NP_793838.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO57533.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 391 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 306/391 (78%), Positives = 351/391 (89%), Gaps = 5/391 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNA +KL+GGR G +GLL++AAL+L+VFPLTLD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF F++FAV+AVP +LA +IG A+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKTL+GWDIR+D AKL LYFVNAGLL GCIL G+++L SKLGRLL+AMRDKEERV Sbjct: 180 NGITDLKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVA FK+FV+C AA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAGLW++ G++ +G+ Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 362 R--GEPNAKAAVAA--EPLKTTPRPSTPDTK 388 R +P A A A P+K+T S+ +T+ Sbjct: 360 RRSDKPVAPAIPGAGHAPVKSTSVKSSVETQ 390 >ref|ZP_08276251.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] gb|EGF30279.1| Urea ABC transporter, permease protein UrtC [Oxalobacteraceae bacterium IMCC9480] Length = 380 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 306/372 (82%), Positives = 337/372 (90%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MN YEKLLGGR GA+GLLV+ ALL+VVFPL LD FRL LVGKYLSYAFVAVGLVLCWGY Sbjct: 1 MNTLYEKLLGGRQGAIGLLVLGALLIVVFPLLLDSFRLGLVGKYLSYAFVAVGLVLCWGY 60 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFG+GGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQIT LP MW+PF Sbjct: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPMMWQPF 120 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HS TI VLAVPT++A ++G+AMFKRRVGDVYFSIVTQA+AAIL+ILI+GQQGLTGGV Sbjct: 121 HSLGLTILLVLAVPTLIAFILGVAMFKRRVGDVYFSIVTQAVAAILAILIVGQQGLTGGV 180 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKT++GWDIRTD AKL+LYFV LL C+LFGR++L SKLGRLL+AMRDKEERV Sbjct: 181 NGITDLKTMLGWDIRTDSAKLILYFVTVALLLACVLFGRFILTSKLGRLLMAMRDKEERV 240 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVASFK+FVFC AA FSAIGGAMFTLQVGFMSPSFVGIVPSIEMVI+AAVGGRMS Sbjct: 241 RFSGYDVASFKIFVFCVAAAFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGA+YGTLLVNFGKTYFSETFPELWLFLMGGLFI VVMYFPNG+AGL+++ G++ + KL Sbjct: 301 LLGAIYGTLLVNFGKTYFSETFPELWLFLMGGLFITVVMYFPNGIAGLYESHGRQWVAKL 360 Query: 362 RGEPNAKAAVAA 373 + AK A A Sbjct: 361 LPKSRAKVATQA 372 >gb|EGH13817.1| branched-chain amino acid ABC transporter permease [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 391 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 304/391 (77%), Positives = 351/391 (89%), Gaps = 5/391 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNA +KL+GGR G +GLL++AAL+L+VFPLTLD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF F++FAV+AVP +LA +IG A+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKTL+GWDIR+D AKL LYFVNAGLL GCIL G+++L SKLGRLL+AMRDKEERV Sbjct: 180 NGITDLKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVA FK+FV+C AA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAGLW++ G++ +G+L Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRL 359 Query: 362 -RGEPNAKAAV---AAEPLKTTPRPSTPDTK 388 R + + A+ P+K+ P S+ +T+ Sbjct: 360 KRSDKPVELAIPGAGHAPVKSAPVKSSVETQ 390 >ref|ZP_03397772.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07233196.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07256806.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB59291.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato T1] Length = 391 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 305/391 (78%), Positives = 351/391 (89%), Gaps = 5/391 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNA +KL+GGR G +GLL++AAL+L+VFPLTLD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF F++FAV+AVP +LA +IG A+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITD+KTL+GWDIR+D AKL LYFVNAGLL GCIL G+++L SKLGRLL+AMRDKEERV Sbjct: 180 NGITDIKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVA FK+FV+C AA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAGLW++ G++ +G+ Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 362 R--GEPNAKAAVAA--EPLKTTPRPSTPDTK 388 + +P A A A P+K TP S+ +T+ Sbjct: 360 KRSDKPVAPAIPGAGHAPVKNTPVKSSVETQ 390 >gb|EGH97357.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 391 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 305/391 (78%), Positives = 351/391 (89%), Gaps = 5/391 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNA +KL+GGR G +GLL++AAL+L+VFPLTLD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYC+AMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCIAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF F++FAV+AVP +LA +IG A+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKTL+GWDIR+D AKL LYFVNAGLL GCIL G+++L SKLGRLL+AMRDKEERV Sbjct: 180 NGITDLKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVA FK+FV+C AA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAGLW++ G++ +G+ Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 362 R--GEPNAKAAVAA--EPLKTTPRPSTPDTK 388 + +P A A A P+K TP S+ +T+ Sbjct: 360 KRSDKPVAPAIPGAGHAPVKNTPVKSSVETQ 390 >ref|ZP_07252269.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas syringae pv. tomato K40] Length = 391 Score = 604 bits (1557), Expect = e-171, Method: Compositional matrix adjust. Identities = 303/391 (77%), Positives = 350/391 (89%), Gaps = 5/391 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNA +KL+GGR G +GLL++AAL+L+VFPLTLD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAI-DKLMGGRQGVIGLLILAALILLVFPLTLDAFRLNMIGKYLTYAFVAVGLVLCWGY 59 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFGLGGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LPA+W PF Sbjct: 60 GGILSLGQGVFFGLGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPALWVPF 119 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF F++FAV+AVP +LA +IG A+FKRRVGDVYFSIVTQAIA IL++LIIGQQGLTGG+ Sbjct: 120 HSFTFSVFAVIAVPVLLAWIIGTALFKRRVGDVYFSIVTQAIALILTVLIIGQQGLTGGI 179 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITD+KTL+GWDIR+D AKL LYFVNAGLL GCIL G+++L SKLGRLL+AMRDKEERV Sbjct: 180 NGITDIKTLLGWDIRSDGAKLALYFVNAGLLLGCILIGKFILASKLGRLLMAMRDKEERV 239 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVA FK+FV+C AA FSAIGG +F LQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 240 RFSGYDVAGFKIFVYCVAAGFSAIGGGLFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 299 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG+LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFP+GLAGLW++ G++ +G+ Sbjct: 300 LLGAVYGSLLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPDGLAGLWESHGRKWLGRF 359 Query: 362 R--GEPNAKAAVAA--EPLKTTPRPSTPDTK 388 + +P A A A P+K TP S+ +T+ Sbjct: 360 KRSDKPVAPAIPGAGHAPVKNTPVKSSVETQ 390 >ref|YP_004753577.1| urea ABC transporter permease UrtC [Collimonas fungivorans Ter331] gb|AEK62754.1| Urea ABC transporter, permease protein UrtC [Collimonas fungivorans Ter331] Length = 399 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 333/402 (82%), Positives = 359/402 (89%), Gaps = 4/402 (0%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 MNAAYEKLLGGRSG +GLL++ LLLVVFPL D+FRLNLVGKYL+YAFVAVGLVLCWGY Sbjct: 1 MNAAYEKLLGGRSGLVGLLILCGLLLVVFPLVFDIFRLNLVGKYLAYAFVAVGLVLCWGY 60 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQGVFFG+GGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQIT LP +W+PF Sbjct: 61 GGILSLGQGVFFGVGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITELPLLWQPF 120 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HSF FT+ AVL VPT++A++IG AMFKRRVGDVYFSIVTQAIAAIL+ILIIGQQGLTGGV Sbjct: 121 HSFGFTLLAVLLVPTLMALVIGAAMFKRRVGDVYFSIVTQAIAAILAILIIGQQGLTGGV 180 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDLKTLMGWDIRTD AKLVLYFVNA LL GCIL GR++L SKLGRLLVAMRDKEERV Sbjct: 181 NGITDLKTLMGWDIRTDSAKLVLYFVNASLLIGCILIGRFILSSKLGRLLVAMRDKEERV 240 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVASFKVFVFC AAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVI+AAVGGRMS Sbjct: 241 RFSGYDVASFKVFVFCVAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIYAAVGGRMS 300 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYGTLLVNFGKTYFSE+FPELWLFLMGGLFIAVVMYFPNGLAGL+Q+ GK L+ KL Sbjct: 301 LLGAVYGTLLVNFGKTYFSESFPELWLFLMGGLFIAVVMYFPNGLAGLYQSHGKLLLSKL 360 Query: 362 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIE-PGATLEASK 402 G +A+ A P P+P+ D IE P +LE SK Sbjct: 361 SGWQRRRASSVAPPAVAKPQPAPADVI---IELPHGSLEGSK 399 >ref|YP_004355043.1| High-affinity branched-chain amino acid ABC transporter permease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA70039.1| putative High-affinity branched-chain amino acid ABC transporter, permease component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 395 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 294/367 (80%), Positives = 332/367 (90%) Query: 7 EKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGYGGILS 66 +K+L G+ LG+ ++A L+ VVFPLTLD FRLN+VGKYL+YAFVAVGLVLCWGYGGILS Sbjct: 5 DKMLAGKQNLLGVGLLALLIFVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILS 64 Query: 67 LGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPFHSFAF 126 LGQGVFFG+GGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQIT LP +W PFHSF+F Sbjct: 65 LGQGVFFGVGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQITELPWLWVPFHSFSF 124 Query: 127 TIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGVNGITD 186 T+ AV+ VP VLA +IGMA+FKRRVGDVYFSIV+QAIA IL++LI+GQQGLTGGVNGITD Sbjct: 125 TLLAVILVPVVLAFIIGMALFKRRVGDVYFSIVSQAIALILTVLIVGQQGLTGGVNGITD 184 Query: 187 LKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERVRFSGY 246 LKTL+GWD+R+D AKL+LYF+NA LLFGCI GR+VL SKLGRLL+AMRDKEERVRFSGY Sbjct: 185 LKTLLGWDLRSDSAKLLLYFINAALLFGCIFIGRFVLASKLGRLLMAMRDKEERVRFSGY 244 Query: 247 DVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAV 306 DVASFK+FVFC AA FSAIGGAMF LQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAV Sbjct: 245 DVASFKIFVFCIAAAFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAV 304 Query: 307 YGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKLRGEPN 366 YG LLVN+GKTYFSE+FPELWL+LMGGLFIAVVMYFPNGLAGLW + G++ +G+L Sbjct: 305 YGALLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPNGLAGLWDSHGRQALGRLLRRTP 364 Query: 367 AKAAVAA 373 +AAV+A Sbjct: 365 QQAAVSA 371 >gb|AEA83419.1| branched-chain amino acid ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] Length = 396 Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust. Identities = 303/400 (75%), Positives = 343/400 (85%), Gaps = 5/400 (1%) Query: 2 MNAAYEKLLGGRSGALGLLVMAALLLVVFPLTLDMFRLNLVGKYLSYAFVAVGLVLCWGY 61 M A ++KL GG+ GA+G L++AALLLVVFPL LD FRLN++GKYL+YAFVAVGLVLCWGY Sbjct: 1 MTALFDKLAGGKQGAIGFLILAALLLVVFPLALDAFRLNMIGKYLTYAFVAVGLVLCWGY 60 Query: 62 GGILSLGQGVFFGLGGYCMAMFLKLEASDPISTKIQSTPGIPDFMDWNQITALPAMWEPF 121 GGILSLGQG+FFGLGGYCMAMFLKLEASDP STKIQSTPGIPDFMDWNQ+T LP WEPF Sbjct: 61 GGILSLGQGIFFGLGGYCMAMFLKLEASDPQSTKIQSTPGIPDFMDWNQLTELPLFWEPF 120 Query: 122 HSFAFTIFAVLAVPTVLAMLIGMAMFKRRVGDVYFSIVTQAIAAILSILIIGQQGLTGGV 181 HS FT+ AV+AVP +LA+++G+AMFKRRVGDVYFSIVTQAIAAIL+ILIIGQQGLTGGV Sbjct: 121 HSIGFTLVAVVAVPMLLALIVGLAMFKRRVGDVYFSIVTQAIAAILTILIIGQQGLTGGV 180 Query: 182 NGITDLKTLMGWDIRTDHAKLVLYFVNAGLLFGCILFGRYVLGSKLGRLLVAMRDKEERV 241 NGITDL+TLMGWDIR++ AK +LYFV A LL GCIL GR++L SKLGRLL+AMRDKEERV Sbjct: 181 NGITDLRTLMGWDIRSNEAKTLLYFVCACLLLGCILIGRFILASKLGRLLMAMRDKEERV 240 Query: 242 RFSGYDVASFKVFVFCAAAMFSAIGGAMFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 301 RFSGYDVASFK+FVFC AA F+ IGGA+FTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS Sbjct: 241 RFSGYDVASFKIFVFCVAAAFAGIGGALFTLQVGFMSPSFVGIVPSIEMVIFAAVGGRMS 300 Query: 302 LLGAVYGTLLVNFGKTYFSETFPELWLFLMGGLFIAVVMYFPNGLAGLWQTQGKRLMGKL 361 LLGAVYG LLVN+GKT FSE+FPELWL+ MGGLFIAVVMYFPNGLAGLWQ+ G++ + + Sbjct: 301 LLGAVYGALLVNYGKTLFSESFPELWLYFMGGLFIAVVMYFPNGLAGLWQSHGRKWL--M 358 Query: 362 RGEPNAKAAVAAEPLKTTPRPSTPDTKRDGIEPGATLEAS 401 R +A EP TPRP P + P LE + Sbjct: 359 RLARRRSSARTVEP--ATPRPLPPSAAQPA-SPVTALETT 395