BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0079.p (418 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776039.1| branched-chain amino acid ABC transporter pe... 857 0.0 ref|YP_004753579.1| urea ABC transporter urea binding protein [C... 768 0.0 ref|ZP_08274366.1| Urea ABC transporter, urea binding protein [O... 764 0.0 ref|ZP_06842711.1| urea ABC transporter, urea binding protein [B... 705 0.0 gb|EGH13819.1| branched-chain amino acid ABC transporter peripla... 704 0.0 ref|YP_553605.1| branched chain amino acid ABC transporter perip... 704 0.0 ref|NP_793840.1| branched-chain amino acid ABC transporter perip... 703 0.0 ref|YP_547422.1| branched-chain amino acid ABC transporter perip... 691 0.0 gb|AEA83417.1| branched-chain amino acid ABC transporter, peripl... 686 0.0 ref|ZP_08404403.1| urea ABC transporter, urea binding protein [H... 681 0.0 >ref|YP_003776039.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64131.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 418 Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/418 (100%), Positives = 418/418 (100%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ Sbjct: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE Sbjct: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL Sbjct: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK Sbjct: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 Query: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA Sbjct: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 Query: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV Sbjct: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 Query: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ Sbjct: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 >ref|YP_004753579.1| urea ABC transporter urea binding protein [Collimonas fungivorans Ter331] gb|AEK62756.1| Urea ABC transporter, urea binding protein [Collimonas fungivorans Ter331] Length = 417 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/418 (92%), Positives = 398/418 (95%), Gaps = 1/418 (0%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 MSH S+S PSF RRK+L+GLAA AA A + AQ TAK+NTTKLA+TDTEVTVGQ Sbjct: 1 MSHRSASDKPSFQRRKVLLGLAASAALALP-AIGFAQSPATAKINTTKLAVTDTEVTVGQ 59 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE Sbjct: 60 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 119 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 +D VAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL Sbjct: 120 SDHVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 179 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK Sbjct: 180 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 239 Query: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGF++ Sbjct: 240 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFYS 299 Query: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 SMKYFQSLDN NNKKFVAEFKAKFG N+VIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV Sbjct: 300 SMKYFQSLDNPNNKKFVAEFKAKFGPNAVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 359 Query: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 AASPG ELK+APEGYVKVH NHHLWSKTRIGEAQKDGQFKV+YES+LIEPNPFPKGYQ Sbjct: 360 AASPGFELKSAPEGYVKVHPNHHLWSKTRIGEAQKDGQFKVIYESDLIEPNPFPKGYQ 417 >ref|ZP_08274366.1| Urea ABC transporter, urea binding protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32159.1| Urea ABC transporter, urea binding protein [Oxalobacteraceae bacterium IMCC9480] Length = 417 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/418 (89%), Positives = 392/418 (93%), Gaps = 1/418 (0%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 MS S + S RRK+LMGLA A+ A P M AQ T+K+NTTKLAITDTEVTVGQ Sbjct: 1 MSPRSPADIKSAQRRKVLMGLAV-ASTLAFPVMGFAQSPATSKINTTKLAITDTEVTVGQ 59 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLL Sbjct: 60 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLV 119 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 +DRVA VFGCWTSASRKAVLPVFEK+NGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL Sbjct: 120 SDRVATVFGCWTSASRKAVLPVFEKENGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 179 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 +W+AKEKKAKTFFLVGSDYIWPRTSNKIARKHIENV+KGSVVGEEYYPLGNTQFGSLINK Sbjct: 180 DWIAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVIKGSVVGEEYYPLGNTQFGSLINK 239 Query: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 IKLKKPDVIF DVVGGSNVAFYKQLKAAGVTAKTQ LLTISVTEDEMLGIGGENVEGF+A Sbjct: 240 IKLKKPDVIFTDVVGGSNVAFYKQLKAAGVTAKTQTLLTISVTEDEMLGIGGENVEGFYA 299 Query: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 SMKYFQSL+N NNKKFVA+FKAK+GAN+V+GDVTQAAYLGPWLWKAAVEKAGSFDVDKV+ Sbjct: 300 SMKYFQSLENPNNKKFVADFKAKYGANAVMGDVTQAAYLGPWLWKAAVEKAGSFDVDKVI 359 Query: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 AAS G+ELK APEGYVKVHENHHLWSKTRIG+AQKDGQFKVVYESELIEPNPFPKGYQ Sbjct: 360 AASAGLELKNAPEGYVKVHENHHLWSKTRIGQAQKDGQFKVVYESELIEPNPFPKGYQ 417 >ref|ZP_06842711.1| urea ABC transporter, urea binding protein [Burkholderia sp. Ch1-1] gb|EFG69670.1| urea ABC transporter, urea binding protein [Burkholderia sp. Ch1-1] Length = 421 Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/422 (82%), Positives = 377/422 (89%), Gaps = 5/422 (1%) Query: 1 MSHS--SSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTV 58 MSH + S PS RRK+LMGLAA A A A+ G+A AQQ+PTAKVNTT LA+TDTEVTV Sbjct: 1 MSHDDQNESGMPSALRRKLLMGLAA-APALAMSGIARAQQFPTAKVNTTHLAVTDTEVTV 59 Query: 59 GQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKL 118 GQLHSATGTMAISETGSIQAERLAI+QIN+ GGILGRKIKIIQEDGASDWPTFAEK+KKL Sbjct: 60 GQLHSATGTMAISETGSIQAERLAIEQINSAGGILGRKIKIIQEDGASDWPTFAEKSKKL 119 Query: 119 LENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLA 178 LEND VAAVFGCWTSASRKAVLP+FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L Sbjct: 120 LENDHVAAVFGCWTSASRKAVLPIFERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILW 179 Query: 179 GLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSL 237 GLNW + KKAK+FFL+GSDYIWPRTSNKIARKHIE L G VVGEEYYPLG T F SL Sbjct: 180 GLNWANQTKKAKSFFLIGSDYIWPRTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSL 239 Query: 238 INKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEG 297 INKIK+ KPD I+A +VGGSNVAFYKQLKAAG+TA Q LLTISVTEDE+LGIGGEN G Sbjct: 240 INKIKIAKPDCIYAIIVGGSNVAFYKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAG 299 Query: 298 FFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVD 357 F+++MKYF+SLDN NNKKFVA FKAK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVD Sbjct: 300 FYSAMKYFESLDNDNNKKFVAAFKAKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVD 359 Query: 358 KVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYES-ELIEPNPFPKG 416 KVVAASPGIELKTAPEGYVK+H NHHLWS+TRIG+AQ DGQFKVV ES +LIEPNPFPKG Sbjct: 360 KVVAASPGIELKTAPEGYVKIHANHHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKG 419 Query: 417 YQ 418 YQ Sbjct: 420 YQ 421 >gb|EGH13819.1| branched-chain amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 414 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/418 (81%), Positives = 372/418 (88%), Gaps = 4/418 (0%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 M + S S PRR L A AA+L G A+ A NTT LA+T TEVTVGQ Sbjct: 1 MDTTLKSATRSLPRRLALSTAALSLIAASLFGQAAI----AADANTTGLAVTATEVTVGQ 56 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHSATGTMAISETGSIQAERLAI+QINA GGILGR+IK++QEDGASDWPTFAEKA+KLL Sbjct: 57 LHSATGTMAISETGSIQAERLAIEQINASGGILGRQIKVVQEDGASDWPTFAEKARKLLV 116 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 D+VAAVFGCWTSASRKAVLPVFEK+NGLLYYPTFYEGLEQSKNV YTGQEATQQ+LAGL Sbjct: 117 GDKVAAVFGCWTSASRKAVLPVFEKENGLLYYPTFYEGLEQSKNVIYTGQEATQQILAGL 176 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 +W+AKEK AKTF+L+GSDYIWPRTS KIARKHIENVL G+VVGE+YYPLGNTQFGSLINK Sbjct: 177 DWIAKEKGAKTFYLIGSDYIWPRTSMKIARKHIENVLHGTVVGEDYYPLGNTQFGSLINK 236 Query: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 +KLKKPDV+FA VVGGSNVAFYKQLKAAGVT+ QNLLT+SVTEDE+LGIGGEN+EGFFA Sbjct: 237 VKLKKPDVVFAAVVGGSNVAFYKQLKAAGVTSTKQNLLTLSVTEDELLGIGGENMEGFFA 296 Query: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 SMKYFQSLDN NNK FV FKAK+G +SV+GDVTQAAYLGPWLWKAAVEKAGSFDVDKVV Sbjct: 297 SMKYFQSLDNPNNKAFVDAFKAKYGKDSVMGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 356 Query: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 AASPGIELKTAPEGYVKVHENHHLWSKTRIGE Q +GQFKV+YES+LIEPNPFPKGYQ Sbjct: 357 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEVQANGQFKVIYESDLIEPNPFPKGYQ 414 >ref|YP_553605.1| branched chain amino acid ABC transporter periplasmic ligand-binding protein [Burkholderia xenovorans LB400] gb|ABE34255.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Burkholderia xenovorans LB400] Length = 421 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/422 (82%), Positives = 377/422 (89%), Gaps = 5/422 (1%) Query: 1 MSHS--SSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTV 58 MSH + S PS RRK+LMGLAA A A A+ G+A AQQ+PTAKVNTT LA+TDTEVTV Sbjct: 1 MSHDDQNESGMPSALRRKLLMGLAA-APALAMSGIARAQQFPTAKVNTTHLAVTDTEVTV 59 Query: 59 GQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKL 118 GQLHSATGTMAISETGSIQAERLAI+QIN+ GGILGRKI+IIQEDGASDWPTFAEK+KKL Sbjct: 60 GQLHSATGTMAISETGSIQAERLAIEQINSAGGILGRKIRIIQEDGASDWPTFAEKSKKL 119 Query: 119 LENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLA 178 LEND VAAVFGCWTSASRKAVLP+FE+DNGLLYYPTFYEGLEQS NVFYTGQEATQQ+L Sbjct: 120 LENDHVAAVFGCWTSASRKAVLPIFERDNGLLYYPTFYEGLEQSHNVFYTGQEATQQILW 179 Query: 179 GLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSL 237 GLNW + KKAK+FFL+GSDYIWPRTSNKIARKHIE L G VVGEEYYPLG T F SL Sbjct: 180 GLNWANQTKKAKSFFLIGSDYIWPRTSNKIARKHIEQHLTGCKVVGEEYYPLGTTNFNSL 239 Query: 238 INKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEG 297 INKIK+ KPD I+A +VGGSNVAFYKQLKAAG+TA Q LLTISVTEDE+LGIGGEN G Sbjct: 240 INKIKIAKPDCIYAIIVGGSNVAFYKQLKAAGITADKQFLLTISVTEDEVLGIGGENFAG 299 Query: 298 FFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVD 357 F+++MKYF+SLDN NNKKFVA FKAK+G SVIGDVTQAAYLGPWLWKAAVEKAGSFDVD Sbjct: 300 FYSAMKYFESLDNDNNKKFVAAFKAKYGPKSVIGDVTQAAYLGPWLWKAAVEKAGSFDVD 359 Query: 358 KVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYES-ELIEPNPFPKG 416 KVVAASPGIELKTAPEGYVK+H NHHLWS+TRIG+AQ DGQFKVV ES +LIEPNPFPKG Sbjct: 360 KVVAASPGIELKTAPEGYVKIHANHHLWSRTRIGQAQVDGQFKVVAESPDLIEPNPFPKG 419 Query: 417 YQ 418 YQ Sbjct: 420 YQ 421 >ref|NP_793840.1| branched-chain amino acid ABC transporter periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] ref|ZP_03397774.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07233198.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07252267.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07256804.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|AAO57535.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EEB59293.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. tomato T1] gb|EGH97355.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 414 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/418 (81%), Positives = 373/418 (89%), Gaps = 4/418 (0%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 M S +S S PRR L A AA++ G A+ A NTT LA+T TEVTVGQ Sbjct: 1 MDTSLTSTKRSLPRRLALGTAALSLIAASIFGQAAI----AADANTTGLAVTATEVTVGQ 56 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHSATGTMAISETGSIQAERLAI+QINA GGILGR+IK++QEDGASDWPTFAEKA+KLL Sbjct: 57 LHSATGTMAISETGSIQAERLAIEQINASGGILGRQIKVVQEDGASDWPTFAEKARKLLV 116 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 D+VAAVFGCWTSASRKAVLPVFEK+NGLLYYPTFYEGLEQSKNV YTGQEATQQ+LAGL Sbjct: 117 GDKVAAVFGCWTSASRKAVLPVFEKENGLLYYPTFYEGLEQSKNVIYTGQEATQQILAGL 176 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGSVVGEEYYPLGNTQFGSLINK 240 +W+AKEK AKTF+L+GSDYIWPRTS KIARKHIENVL G+VVGE+YYPLGNTQFGSLINK Sbjct: 177 DWIAKEKGAKTFYLIGSDYIWPRTSMKIARKHIENVLHGTVVGEDYYPLGNTQFGSLINK 236 Query: 241 IKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFFA 300 +KLKKPDV+FA VVGGSNVAFYKQLKAAGVT+ QNLLT+SVTEDE+LGIGGEN+EGF+A Sbjct: 237 VKLKKPDVVFAAVVGGSNVAFYKQLKAAGVTSTKQNLLTLSVTEDELLGIGGENMEGFYA 296 Query: 301 SMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 360 SMKYFQSLDN NNK FV FKAK+G +SV+GDVTQAAYLGPWLWKAAVEKAGSFDVDKVV Sbjct: 297 SMKYFQSLDNPNNKAFVDAFKAKYGKDSVMGDVTQAAYLGPWLWKAAVEKAGSFDVDKVV 356 Query: 361 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESELIEPNPFPKGYQ 418 AASPGIELKTAPEGYVKVHENHHLWSKTRIGE Q +GQFKV+YES+LIEPNPFPKGYQ Sbjct: 357 AASPGIELKTAPEGYVKVHENHHLWSKTRIGEVQANGQFKVIYESDLIEPNPFPKGYQ 414 >ref|YP_547422.1| branched-chain amino acid ABC transporter periplasmic amino acid-binding protein [Polaromonas sp. JS666] gb|ABE42524.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Polaromonas sp. JS666] Length = 420 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/420 (80%), Positives = 368/420 (87%), Gaps = 2/420 (0%) Query: 1 MSHSSSSHPPSFPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVTVGQ 60 MS P RR+++ G+AA LP A AQQ+PTAKVNTTKLAITDTEVTVGQ Sbjct: 1 MSKDDRDTPSLINRRRLVQGMAAALPLTGLPLWAQAQQFPTAKVNTTKLAITDTEVTVGQ 60 Query: 61 LHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKKLLE 120 LHS++GTMAISETGSIQAE+LAIDQINAMGG+LGRKIK+I+EDGASDWPTFAEK+KKLL Sbjct: 61 LHSSSGTMAISETGSIQAEQLAIDQINAMGGVLGRKIKVIKEDGASDWPTFAEKSKKLLV 120 Query: 121 NDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVLAGL 180 ND+VAAVFGCWTSASRKAVLP+FEK+NG+LYYPTFYEGLEQSKNV YTGQEATQQ+L GL Sbjct: 121 NDKVAAVFGCWTSASRKAVLPIFEKENGMLYYPTFYEGLEQSKNVIYTGQEATQQILYGL 180 Query: 181 NWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGS-VVGEEYYPLGNTQFGSLIN 239 +W AKEKKAKTFFLVGSDYIWPRTS KI RKHIE L GS VVGEEYYPLG+T F SLIN Sbjct: 181 DWAAKEKKAKTFFLVGSDYIWPRTSMKIGRKHIEGHLAGSKVVGEEYYPLGHTNFNSLIN 240 Query: 240 KIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVEGFF 299 KIK+ KPD IF VVGGSNVAFYKQLKAAGVTA Q LLTISVTEDE+LGIGGEN+ GF+ Sbjct: 241 KIKVAKPDCIFIAVVGGSNVAFYKQLKAAGVTADKQFLLTISVTEDEVLGIGGENMNGFY 300 Query: 300 ASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDVDKV 359 ASMKYFQSLDNANNK FV+ FKAK+G ++VIGDVTQA YLGPWLWKA VEKAGSFDVDK+ Sbjct: 301 ASMKYFQSLDNANNKAFVSAFKAKYGKDAVIGDVTQAGYLGPWLWKATVEKAGSFDVDKI 360 Query: 360 VAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYESE-LIEPNPFPKGYQ 418 AAS GIELKTAPEGYVK+H+NHHLWSK RIG+AQ DGQFKVV ES LIEPNPFPKGYQ Sbjct: 361 AAASTGIELKTAPEGYVKLHDNHHLWSKARIGQAQTDGQFKVVAESSALIEPNPFPKGYQ 420 >gb|AEA83417.1| branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein [Pseudomonas stutzeri DSM 4166] Length = 389 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/378 (86%), Positives = 354/378 (93%) Query: 41 TAKVNTTKLAITDTEVTVGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKII 100 +A+VNTT LA+TDTEVTVGQLHSATGTMAISETGSIQAERLAI+QINA GGILGR+IK+I Sbjct: 12 SAEVNTTGLAVTDTEVTVGQLHSATGTMAISETGSIQAERLAIEQINAAGGILGRQIKVI 71 Query: 101 QEDGASDWPTFAEKAKKLLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLE 160 QEDGASDWPTFAEKAKKLLE D+VAAVFGCWTSASRKAVLP+FE++NGLLYYPTFYEGLE Sbjct: 72 QEDGASDWPTFAEKAKKLLERDKVAAVFGCWTSASRKAVLPIFERENGLLYYPTFYEGLE 131 Query: 161 QSKNVFYTGQEATQQVLAGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLKGS 220 QSKNV YTGQEATQQ+LAGL+WVAKEK AKTF+L+GSDYIWPRTS KIARKHIENVL G Sbjct: 132 QSKNVVYTGQEATQQILAGLDWVAKEKGAKTFYLLGSDYIWPRTSMKIARKHIENVLGGK 191 Query: 221 VVGEEYYPLGNTQFGSLINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTI 280 VVGEEYYPLGNTQFGSL NKIKLKKPDVIFA VVGGSNVAFYKQLKAAG+TA Q LLT+ Sbjct: 192 VVGEEYYPLGNTQFGSLTNKIKLKKPDVIFAAVVGGSNVAFYKQLKAAGITADKQTLLTL 251 Query: 281 SVTEDEMLGIGGENVEGFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLG 340 SVTEDE+LGIGGEN+ GF+ASMKYFQSLDN NN +FV FKAK+G ++VIGDVTQAAYLG Sbjct: 252 SVTEDELLGIGGENMAGFYASMKYFQSLDNPNNAEFVKAFKAKYGNDAVIGDVTQAAYLG 311 Query: 341 PWLWKAAVEKAGSFDVDKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFK 400 PWLWKAAVEKAGSFDVDKVVAAS G+EL TAPEGYVKVHEN HLWSKTRIG+ Q DGQF+ Sbjct: 312 PWLWKAAVEKAGSFDVDKVVAASAGLELNTAPEGYVKVHENQHLWSKTRIGQVQADGQFQ 371 Query: 401 VVYESELIEPNPFPKGYQ 418 VVYES+LIEPNPFPKGYQ Sbjct: 372 VVYESDLIEPNPFPKGYQ 389 >ref|ZP_08404403.1| urea ABC transporter, urea binding protein [Hylemonella gracilis ATCC 19624] gb|EGI78424.1| urea ABC transporter, urea binding protein [Hylemonella gracilis ATCC 19624] Length = 422 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/423 (80%), Positives = 368/423 (86%), Gaps = 6/423 (1%) Query: 1 MSHSSSSHPPS---FPRRKILMGLAAGAAAAALPGMASAQQYPTAKVNTTKLAITDTEVT 57 M SS PP RR++L GL A + A LP + A PTA VNTTKLA+TDTEVT Sbjct: 1 MKKSSVPTPPQAAGLQRRQLLQGLGA-LSIAGLPALGHAAAPPTAAVNTTKLAVTDTEVT 59 Query: 58 VGQLHSATGTMAISETGSIQAERLAIDQINAMGGILGRKIKIIQEDGASDWPTFAEKAKK 117 VGQLHS+TGTMAISETGSIQAE+LAIDQINAMGGILGRKIK+I+EDGASDWPTFAEK+KK Sbjct: 60 VGQLHSSTGTMAISETGSIQAEQLAIDQINAMGGILGRKIKVIKEDGASDWPTFAEKSKK 119 Query: 118 LLENDRVAAVFGCWTSASRKAVLPVFEKDNGLLYYPTFYEGLEQSKNVFYTGQEATQQVL 177 LL ND VAAVFGCWTSASRKAVLPVFEK+NGLLYYPTFYEGLEQSKNV YTGQEATQQ++ Sbjct: 120 LLVNDHVAAVFGCWTSASRKAVLPVFEKENGLLYYPTFYEGLEQSKNVIYTGQEATQQII 179 Query: 178 AGLNWVAKEKKAKTFFLVGSDYIWPRTSNKIARKHIENVLK-GSVVGEEYYPLGNTQFGS 236 GL+W +KEKKAKTFFLVGSDYIWPRTS KIARKHIE+V K G VVGEEYYPLGNT F S Sbjct: 180 YGLDWGSKEKKAKTFFLVGSDYIWPRTSMKIARKHIESVGKLGKVVGEEYYPLGNTNFNS 239 Query: 237 LINKIKLKKPDVIFADVVGGSNVAFYKQLKAAGVTAKTQNLLTISVTEDEMLGIGGENVE 296 LINKIK+ KPD IFA VVGGSNVAFYKQLKAAG+T Q LLT+SVTEDEM G+GGEN E Sbjct: 240 LINKIKVAKPDCIFAAVVGGSNVAFYKQLKAAGITGAKQFLLTLSVTEDEMTGVGGENFE 299 Query: 297 GFFASMKYFQSLDNANNKKFVAEFKAKFGANSVIGDVTQAAYLGPWLWKAAVEKAGSFDV 356 GF++SMKYFQSLDN NNKKFVA FKAK+G ++VIGDVTQA YLGPWLWKAAVEKAGSFDV Sbjct: 300 GFYSSMKYFQSLDNENNKKFVAAFKAKYGKDAVIGDVTQAGYLGPWLWKAAVEKAGSFDV 359 Query: 357 DKVVAASPGIELKTAPEGYVKVHENHHLWSKTRIGEAQKDGQFKVVYES-ELIEPNPFPK 415 DKVVAASPGIELKTAPEGYVK+HENHHLWSK+RI KDG FKVV ES +LIEP+PFPK Sbjct: 360 DKVVAASPGIELKTAPEGYVKLHENHHLWSKSRIAIGNKDGTFKVVSESPKLIEPDPFPK 419 Query: 416 GYQ 418 GYQ Sbjct: 420 GYQ 422